Citrus Sinensis ID: 002155
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 959 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LYN8 | 1192 | Leucine-rich repeat recep | yes | no | 0.941 | 0.757 | 0.562 | 0.0 | |
| Q8L899 | 1207 | Systemin receptor SR160 O | N/A | no | 0.925 | 0.735 | 0.373 | 1e-160 | |
| Q8GUQ5 | 1207 | Brassinosteroid LRR recep | N/A | no | 0.925 | 0.735 | 0.372 | 1e-159 | |
| Q9ZWC8 | 1166 | Serine/threonine-protein | no | no | 0.958 | 0.788 | 0.383 | 1e-158 | |
| Q9LJF3 | 1164 | Receptor-like protein kin | no | no | 0.978 | 0.805 | 0.386 | 1e-155 | |
| Q9ZPS9 | 1143 | Serine/threonine-protein | no | no | 0.943 | 0.791 | 0.371 | 1e-155 | |
| Q9LVP0 | 1102 | Probable leucine-rich rep | no | no | 0.942 | 0.820 | 0.364 | 1e-154 | |
| O22476 | 1196 | Protein BRASSINOSTEROID I | no | no | 0.960 | 0.770 | 0.377 | 1e-150 | |
| O49318 | 1124 | Probable leucine-rich rep | no | no | 0.945 | 0.806 | 0.355 | 1e-146 | |
| Q9SHI2 | 1101 | Leucine-rich repeat recep | no | no | 0.950 | 0.828 | 0.347 | 1e-145 |
| >sp|Q9LYN8|EXS_ARATH Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1003 bits (2592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/958 (56%), Positives = 664/958 (69%), Gaps = 55/958 (5%)
Query: 1 MLSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
MLSFN+LSG LP ELS++P+LTF+AE+NQLSGSLPSW+G W ++SLLL++N+F G+IP
Sbjct: 288 MLSFNSLSGPLPLELSEIPLLTFSAERNQLSGSLPSWMGKWKVLDSLLLANNRFSGEIPH 347
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
EI +C MLK +SL++N LSGSIPRELC S SLE IDL GNLL+GTIE VF+ CS+L +L+
Sbjct: 348 EIEDCPMLKHLSLASNLLSGSIPRELCGSGSLEAIDLSGNLLSGTIEEVFDGCSSLGELL 407
Query: 121 IFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180
+ N I GSIPE L KLPLM LDLDSNNFTG IP S+W S LMEF+A+ N LEG
Sbjct: 408 LTNNQINGSIPEDLWKLPLMALDLDSNNFTGEIPKSLWKSTNLMEFTASYNRLEG----- 462
Query: 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDL 240
+LP EIGN ++L L L+ N G IP E+G SL+ L+L
Sbjct: 463 -------------------YLPAEIGNAASLKRLVLSDNQLTGEIPREIGKLTSLSVLNL 503
Query: 241 GNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDL 300
N G IP ++ D L L L NNL G IP K ++ + L
Sbjct: 504 NANMFQGKIPVELGDCTSLTTLDLGSNNLQGQIPDK------------ITALAQLQCLVL 551
Query: 301 SYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSE 360
SYN LSG IP + + +++ LS L + DLS N+L+GPIP E
Sbjct: 552 SYNNLSGSIPSKPSAYFHQIEM------------PDLSFLQHHGIFDLSYNRLSGPIPEE 599
Query: 361 FGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDL 420
G+ + L + L NN L+G IP SL L L L+L+GN L+G +P GN +L L+L
Sbjct: 600 LGECLVLVEISLSNNHLSGEIPASLSRLTNLTILDLSGNALTGSIPKEMGNSLKLQGLNL 659
Query: 421 SFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLP 480
+ N+L+G +P S + +LV L L NKL GPV N ++ M++S N G L
Sbjct: 660 ANNQLNGHIPESFGLLGSLVKLNLTKNKLDGPVPASLGNLK--ELTHMDLSFNNLSGELS 717
Query: 481 RSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYL 540
L + L L + +NKFTGEIP +LGNL QLEYLDVS N L G+IP +C L NL +L
Sbjct: 718 SELSTMEKLVGLYIEQNKFTGEIPSELGNLTQLEYLDVSENLLSGEIPTKICGLPNLEFL 777
Query: 541 SLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTFGKLALLHAFGLAGLV 600
+LA+N L G VP G+CQ+ SK L+GNK+LCG+++GS+C+++ L A+G+AGL+
Sbjct: 778 NLAKNNLRGEVPSDGVCQDPSKALLSGNKELCGRVVGSDCKIEG---TKLRSAWGIAGLM 834
Query: 601 VGCVFIVLTTVIALRK--QIKRRSRCSDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSIN 658
+G IV V +LR+ KR + DPE +EE++L F D NLYFLS SRS+EPLSIN
Sbjct: 835 LGFTIIVFVFVFSLRRWAMTKRVKQRDDPERMEESRLKGFVDQNLYFLSGSRSREPLSIN 894
Query: 659 IAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQG 718
IAMFEQPL+++ L I+EAT++F K NIIGDGGFGTVYKA LP KTVAVKKLS+AKTQG
Sbjct: 895 IAMFEQPLLKVRLGDIVEATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKKLSEAKTQG 954
Query: 719 HREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGW 778
+REF AEMETLGKVKH NLV LLGYCSF EEKLLVYEYMVNGSLD WLRN+TG LEVL W
Sbjct: 955 NREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDW 1014
Query: 779 DKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838
KR KIA GAARGLAFLHHGF PHIIHRDIKASNILL+ +FE KVADFGLARLISACE+H
Sbjct: 1015 SKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESH 1074
Query: 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGW 898
VST IAGTFGYIPPEYGQS R+TT+GDVYSFGVILLELVTGKEPTGP+FK+ EGGNLVGW
Sbjct: 1075 VSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGGNLVGW 1134
Query: 899 VFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
QK+ +G+A DV+DP +++ K L++L+IA CL++ PA RP ML VLK LKEI
Sbjct: 1135 AIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALKEI 1192
|
Receptor with a serine/threonine-protein kinase activity required for the specification of the correct number of male archesporial initials and for the subsequent specification of tapetal and middle cell layer identities. In seeds, required for enhancing cell size and the rate of embryonic development. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q8L899|BRI1_SOLPE Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1 | Back alignment and function description |
|---|
Score = 565 bits (1455), Expect = e-160, Method: Compositional matrix adjust.
Identities = 372/997 (37%), Positives = 534/997 (53%), Gaps = 109/997 (10%)
Query: 23 FAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSI 82
F+ + N+L+GS+P ++ + L LS+N F + P +CS
Sbjct: 217 FSIKGNKLAGSIPEL--DFKNLSYLDLSANNF-STVFPSFKDCS---------------- 257
Query: 83 PRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVL 142
+L+ +DL N G I C LS L + N G +P+ S+ L L
Sbjct: 258 --------NLQHLDLSSNKFYGDIGSSLSSCGKLSFLNLTNNQFVGLVPKLPSE-SLQYL 308
Query: 143 DLDSNNFTGIIPVSIWN-SETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHL 201
L N+F G+ P + + +T++E + N G +P +G ++LE + ++NN G L
Sbjct: 309 YLRGNDFQGVYPNQLADLCKTVVELDLSYNNFSGMVPESLGECSSLELVDISNNNFSGKL 368
Query: 202 PKE-IGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIAD--LAQ 258
P + + LS + + L+ N F G +P + L TLD+ +NNL+G+IP I +
Sbjct: 369 PVDTLLKLSNIKTMVLSFNKFVGGLPDSFSNLPKLETLDMSSNNLTGIIPSGICKDPMNN 428
Query: 259 LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVV 318
L+ L L +N GPIP S+ + ++ DLS+N L+G IP LGS
Sbjct: 429 LKVLYLQNNLFKGPIPDSLSNCSQLVSL------------DLSFNYLTGSIPSSLGSLSK 476
Query: 319 VVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLT 378
+ DL+L N LSG+IP L L L L L N LTGPIP+ + KL + L NNQL+
Sbjct: 477 LKDLILWLNQLSGEIPQELMYLQALENLILDFNDLTGPIPASLSNCTKLNWISLSNNQLS 536
Query: 379 GSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSL----- 433
G IP SLG L L L L N +SG +P GN + L LDL+ N L+G +P L
Sbjct: 537 GEIPASLGRLSNLAILKLGNNSISGNIPAELGNCQSLIWLDLNTNFLNGSIPPPLFKQSG 596
Query: 434 --------------------------SNILNLVGLYLQH-NKLS------------GPVD 454
N+L G+ + +++S G
Sbjct: 597 NIAVALLTGKRYVYIKNDGSKECHGAGNLLEFGGIRQEQLDRISTRHPCNFTRVYRGITQ 656
Query: 455 ELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLE 514
F+++ + + +++S N +G +P+ LG + YL+ L+L N +G IP LG L +
Sbjct: 657 PTFNHNGS--MIFLDLSYNKLEGSIPKELGAMYYLSILNLGHNDLSGMIPQQLGGLKNVA 714
Query: 515 YLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGK 574
LD+S NR G IP ++ SL+ L + L+ N L GM+P S N LCG
Sbjct: 715 ILDLSYNRFNGTIPNSLTSLTLLGEIDLSNNNLSGMIPESAPFDTFPDYRF-ANNSLCGY 773
Query: 575 II----------GSNCQVKTFGKLALLHAFGLAGLVVGCVFIVLTTVIALRKQIKRRSRC 624
+ +N K+ + A L GL+ I ++A+ + +RR +
Sbjct: 774 PLPLPCSSGPKSDANQHQKSHRRQASLAGSVAMGLLFSLFCIFGLIIVAIETKKRRRKKE 833
Query: 625 SDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKT 684
+ E + +S + ++ + +S+R E LSIN+A FE+PL +LT +LEATN F
Sbjct: 834 AALEAYMDGHSHSATANSAWKFTSAR--EALSINLAAFEKPLRKLTFADLLEATNGFHND 891
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
+++G GGFG VYKA L DG VA+KKL QG REFTAEMET+GK+KH+NLVPLLGYC
Sbjct: 892 SLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYC 951
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHII 804
EE+LLVYEYM GSL+ L +R + L W R KIA GAARGLAFLHH PHII
Sbjct: 952 KVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHII 1011
Query: 805 HRDIKASNILLNEEFEAKVADFGLARLISACETHVS-TDIAGTFGYIPPEYGQSGRSTTR 863
HRD+K+SN+LL+E EA+V+DFG+ARL+SA +TH+S + +AGT GY+PPEY QS R +T+
Sbjct: 1012 HRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTK 1071
Query: 864 GDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADS-- 921
GDVYS+GV+LLEL+TGK+PT + D NLVGWV + KG+ DV D +L D+
Sbjct: 1072 GDVYSYGVVLLELLTGKQPT--DSADFGDNNLVGWV-KLHAKGKITDVFDRELLKEDASI 1128
Query: 922 KPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958
+ +L+ L++A CL D RPTM+ V+ KEI+
Sbjct: 1129 EIELLQHLKVACACLDDRHWKRPTMIQVMAMFKEIQA 1165
|
Receptor with a serine/threonine-protein kinase activity. Involved in the perception of systemin, a peptide hormone responsible for the systemic activation of defense genes in leaves of wounded plants. May also regulate, in response to brassinosteroid binding, a signaling cascade involved in plant development. Solanum peruvianum (taxid: 4082) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8GUQ5|BRI1_SOLLC Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 563 bits (1450), Expect = e-159, Method: Compositional matrix adjust.
Identities = 371/997 (37%), Positives = 533/997 (53%), Gaps = 109/997 (10%)
Query: 23 FAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSI 82
F+ + N+L+GS+P ++ + L LS+N F + P +CS
Sbjct: 217 FSLKGNKLAGSIPEL--DFKNLSYLDLSANNF-STVFPSFKDCS---------------- 257
Query: 83 PRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVL 142
+L+ +DL N G I C LS L + N G +P+ S+ L L
Sbjct: 258 --------NLQHLDLSSNKFYGDIGSSLSSCGKLSFLNLTNNQFVGLVPKLPSE-SLQYL 308
Query: 143 DLDSNNFTGIIPVSIWN-SETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHL 201
L N+F G+ P + + +T++E + N G +P +G ++LE + ++ N G L
Sbjct: 309 YLRGNDFQGVYPNQLADLCKTVVELDLSYNNFSGMVPESLGECSSLELVDISYNNFSGKL 368
Query: 202 PKE-IGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIAD--LAQ 258
P + + LS + + L+ N F G +P + + L TLD+ +NNL+G+IP I +
Sbjct: 369 PVDTLSKLSNIKTMVLSFNKFVGGLPDSFSNLLKLETLDMSSNNLTGVIPSGICKDPMNN 428
Query: 259 LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVV 318
L+ L L +N GPIP S+ + ++ DLS+N L+G IP LGS
Sbjct: 429 LKVLYLQNNLFKGPIPDSLSNCSQLVSL------------DLSFNYLTGSIPSSLGSLSK 476
Query: 319 VVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLT 378
+ DL+L N LSG+IP L L L L L N LTGPIP+ + KL + L NNQL+
Sbjct: 477 LKDLILWLNQLSGEIPQELMYLQALENLILDFNDLTGPIPASLSNCTKLNWISLSNNQLS 536
Query: 379 GSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSL----- 433
G IP SLG L L L L N +SG +P GN + L LDL+ N L+G +P L
Sbjct: 537 GEIPASLGRLSNLAILKLGNNSISGNIPAELGNCQSLIWLDLNTNFLNGSIPPPLFKQSG 596
Query: 434 --------------------------SNILNLVGLYLQH-NKLS------------GPVD 454
N+L G+ + +++S G
Sbjct: 597 NIAVALLTGKRYVYIKNDGSKECHGAGNLLEFGGIRQEQLDRISTRHPCNFTRVYRGITQ 656
Query: 455 ELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLE 514
F+++ + + +++S N +G +P+ LG + YL+ L+L N +G IP LG L +
Sbjct: 657 PTFNHNGS--MIFLDLSYNKLEGSIPKELGAMYYLSILNLGHNDLSGMIPQQLGGLKNVA 714
Query: 515 YLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGK 574
LD+S NR G IP ++ SL+ L + L+ N L GM+P S N LCG
Sbjct: 715 ILDLSYNRFNGTIPNSLTSLTLLGEIDLSNNNLSGMIPESAPFDTFPDYRF-ANNSLCGY 773
Query: 575 II----------GSNCQVKTFGKLALLHAFGLAGLVVGCVFIVLTTVIALRKQIKRRSRC 624
+ +N K+ + A L GL+ I ++A+ + +RR +
Sbjct: 774 PLPIPCSSGPKSDANQHQKSHRRQASLAGSVAMGLLFSLFCIFGLIIVAIETKKRRRKKE 833
Query: 625 SDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKT 684
+ E + +S + ++ + +S+R E LSIN+A FE+PL +LT +LEATN F
Sbjct: 834 AALEAYMDGHSHSATANSAWKFTSAR--EALSINLAAFEKPLRKLTFADLLEATNGFHND 891
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
+++G GGFG VYKA L DG VA+KKL QG REFTAEMET+GK+KH+NLVPLLGYC
Sbjct: 892 SLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYC 951
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHII 804
EE+LLVYEYM GSL+ L +R L W R KIA GAARGLAFLHH PHII
Sbjct: 952 KVGEERLLVYEYMKYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAFLHHNCIPHII 1011
Query: 805 HRDIKASNILLNEEFEAKVADFGLARLISACETHVS-TDIAGTFGYIPPEYGQSGRSTTR 863
HRD+K+SN+LL+E EA+V+DFG+ARL+SA +TH+S + +AGT GY+PPEY QS R +T+
Sbjct: 1012 HRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTK 1071
Query: 864 GDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADS-- 921
GDVYS+GV+LLEL+TGK+PT + D NLVGWV + KG+ DV D +L D+
Sbjct: 1072 GDVYSYGVVLLELLTGKQPT--DSADFGDNNLVGWV-KLHAKGKITDVFDRELLKEDASI 1128
Query: 922 KPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958
+ +L+ L++A CL D RPTM+ V+ KEI+
Sbjct: 1129 EIELLQHLKVACACLDDRHWKRPTMIQVMAMFKEIQA 1165
|
Receptor with a serine/threonine-protein kinase activity. Regulates, in response to brassinosteroid binding, a signaling cascade involved in plant development, including expression of light- and stress-regulated genes, promotion of cell elongation, normal leaf and chloroplast senescence, and flowering. May be involved in a feedback regulation of brassinosteroid biosynthesis. May be also involved in the perception of systemin, a peptide hormone responsible for the systemic activation of defense genes in leaves of wounded plants. Solanum lycopersicum (taxid: 4081) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9ZWC8|BRL1_ARATH Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 559 bits (1441), Expect = e-158, Method: Compositional matrix adjust.
Identities = 383/998 (38%), Positives = 523/998 (52%), Gaps = 79/998 (7%)
Query: 2 LSFNALSGSLPEE-LSDLP--ILTFAAEKNQLSGSLPSW-LGNWNQMESLLLSSNQFIG- 56
LS+N LS +PE +SD P + N LSG G + LS N G
Sbjct: 182 LSYNILSDKIPESFISDFPASLKYLDLTHNNLSGDFSDLSFGICGNLTFFSLSQNNLSGD 241
Query: 57 KIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNL 116
K P + NC L+++++S N L+G IP G G F+ NL
Sbjct: 242 KFPITLPNCKFLETLNISRNNLAGKIP-------------------NGEYWGSFQ---NL 279
Query: 117 SQLVIFRNHIYGSIPEYLSKL--PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLE 174
QL + N + G IP LS L L++LDL N F+G +P L + NN L
Sbjct: 280 KQLSLAHNRLSGEIPPELSLLCKTLVILDLSGNTFSGELPSQFTACVWLQNLNLGNNYLS 339
Query: 175 GS-LPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCI 233
G L V + L + N + G +P + N S L VLDL+SN F G +P
Sbjct: 340 GDFLNTVVSKITGITYLYVAYNNISGSVPISLTNCSNLRVLDLSSNGFTGNVPSGFCSLQ 399
Query: 234 SLTTLD---LGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLS 290
S L+ + NN LSG +P ++ L+ + LS N L+GPIP + + N+ DL
Sbjct: 400 SSPVLEKILIANNYLSGTVPMELGKCKSLKTIDLSFNELTGPIPKE---IWMLPNLSDLV 456
Query: 291 FIQHHGVFDLSYNRLSGPIPEELGSCVV---VVDLLLNNNMLSGKIPGSLSRLTNLTTLD 347
+ N L+G IPE G CV + L+LNNN+L+G IP S+SR TN+ +
Sbjct: 457 ---------MWANNLTGTIPE--GVCVKGGNLETLILNNNLLTGSIPESISRCTNMIWIS 505
Query: 348 LSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPT 407
LS N+LTG IPS G+ KL L LGNN L+G++P LG+ L+ L+L N L+G +P
Sbjct: 506 LSSNRLTGKIPSGIGNLSKLAILQLGNNSLSGNVPRQLGNCKSLIWLDLNSNNLTGDLPG 565
Query: 408 SFGNLKELT--------HLDLSFNE--LDGQLPSSLSNILNLVGLYLQHNKL--SGPVDE 455
+ L NE D + L + L+ + S P
Sbjct: 566 ELASQAGLVMPGSVSGKQFAFVRNEGGTDCRGAGGLVEFEGIRAERLERLPMVHSCPATR 625
Query: 456 LFSN------SAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGN 509
++S SA + ++S N G +P GN+ YL L+L N+ TG IP G
Sbjct: 626 IYSGMTMYTFSANGSMIYFDISYNAVSGFIPPGYGNMGYLQVLNLGHNRITGTIPDSFGG 685
Query: 510 LMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNK 569
L + LD+S N L G +P ++ SLS L L ++ N L G +P G N
Sbjct: 686 LKAIGVLDLSHNNLQGYLPGSLGSLSFLSDLDVSNNNLTGPIPFGGQLTTFPVSRYANNS 745
Query: 570 DLCG---KIIGSNCQVKTFGKLALLHAFGLAGLVVGCVFIVLTTVIALRKQIKRRSRCSD 626
LCG + GS + ++ ++ G F + V+ L + R +
Sbjct: 746 GLCGVPLRPCGSAPRRPITSRIHAKKQTVATAVIAGIAFSFMCFVM-LVMALYRVRKVQK 804
Query: 627 PEEIEETKLNSFSDHNLYFLSSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKTNI 686
E+ E + S S EPLSIN+A FE+PL +LT H+LEATN F +
Sbjct: 805 KEQKREKYIESLPTSGSCSWKLSSVPEPLSINVATFEKPLRKLTFAHLLEATNGFSAETM 864
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF 746
+G GGFG VYKA L DG VA+KKL + QG REF AEMET+GK+KH+NLVPLLGYC
Sbjct: 865 VGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKV 924
Query: 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLE--VLGWDKRYKIACGAARGLAFLHHGFTPHII 804
EE+LLVYEYM GSL+ L ++ L W R KIA GAARGLAFLHH PHII
Sbjct: 925 GEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHII 984
Query: 805 HRDIKASNILLNEEFEAKVADFGLARLISACETHVS-TDIAGTFGYIPPEYGQSGRSTTR 863
HRD+K+SN+LL+E+FEA+V+DFG+ARL+SA +TH+S + +AGT GY+PPEY QS R T +
Sbjct: 985 HRDMKSSNVLLDEDFEARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAK 1044
Query: 864 GDVYSFGVILLELVTGKEPTGP-EFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSK 922
GDVYS+GVILLEL++GK+P P EF E NLVGW Q ++ + A++LDP ++T S
Sbjct: 1045 GDVYSYGVILLELLSGKKPIDPGEFG--EDNNLVGWAKQLYREKRGAEILDPELVTDKSG 1102
Query: 923 PM-MLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
+ + L+IA CL D P RPTM+ ++ KE+K +
Sbjct: 1103 DVELFHYLKIASQCLDDRPFKRPTMIQLMAMFKEMKAD 1140
|
Receptor with a serine/threonine-protein kinase activity. Regulates, in response to brassinosteroid binding, a signaling cascade involved in plant development. Binds brassinolide. May be involved in cell growth and vascular differentiation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LJF3|BRL3_ARATH Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 548 bits (1413), Expect = e-155, Method: Compositional matrix adjust.
Identities = 385/996 (38%), Positives = 529/996 (53%), Gaps = 58/996 (5%)
Query: 2 LSFNALSGSLPEE--LSDLPILTFAAEKNQLSGSLP-SWLGNW-NQMESLLLSSNQFIGK 57
S N L+G L S+ I T N+ S +P +++ ++ N ++ L LS N G
Sbjct: 157 FSHNKLAGKLKSSPSASNKRITTVDLSNNRFSDEIPETFIADFPNSLKHLDLSGNNVTGD 216
Query: 58 IPP-EIGNCSMLKSISLSNNFLSGS-IPRELCTSESLEEIDLDGNLLTGTIEG--VFEKC 113
G C L SLS N +SG P L + LE ++L N L G I G +
Sbjct: 217 FSRLSFGLCENLTVFSLSQNSISGDRFPVSLSNCKLLETLNLSRNSLIGKIPGDDYWGNF 276
Query: 114 SNLSQLVIFRNHIYGSIPEYLSKL--PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANN 171
NL QL + N G IP LS L L VLDL N+ TG +P S + +L + NN
Sbjct: 277 QNLRQLSLAHNLYSGEIPPELSLLCRTLEVLDLSGNSLTGQLPQSFTSCGSLQSLNLGNN 336
Query: 172 LLEGS-LPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELG 230
L G L V + + L L N + G +P + N S L VLDL+SN F G +P
Sbjct: 337 KLSGDFLSTVVSKLSRITNLYLPFNNISGSVPISLTNCSNLRVLDLSSNEFTGEVPSGFC 396
Query: 231 DCISLTTLD---LGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMP 287
S + L+ + NN LSG +P ++ L+ + LS N L+G IP + + +P
Sbjct: 397 SLQSSSVLEKLLIANNYLSGTVPVELGKCKSLKTIDLSFNALTGLIPKEIWT------LP 450
Query: 288 DLSFIQHHGVFDLSYNRLSGPIPEELGSCVV---VVDLLLNNNMLSGKIPGSLSRLTNLT 344
LS + + N L+G IPE + CV + L+LNNN+L+G +P S+S+ TN+
Sbjct: 451 KLSDLV------MWANNLTGGIPESI--CVDGGNLETLILNNNLLTGSLPESISKCTNML 502
Query: 345 TLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGK 404
+ LS N LTG IP G KL L LGNN LTG+IP LG+ L+ L+L N L+G
Sbjct: 503 WISLSSNLLTGEIPVGIGKLEKLAILQLGNNSLTGNIPSELGNCKNLIWLDLNSNNLTGN 562
Query: 405 VPTSFGNLKELT--------HLDLSFNE--LDGQLPSSLSNILNLVGLYLQHNKL--SGP 452
+P + L NE D + L + L+H + S P
Sbjct: 563 LPGELASQAGLVMPGSVSGKQFAFVRNEGGTDCRGAGGLVEFEGIRAERLEHFPMVHSCP 622
Query: 453 VDELFSNSAAWKIAT------MNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPD 506
++S + ++ +++S N G +P G + YL L+L N TG IP
Sbjct: 623 KTRIYSGMTMYMFSSNGSMIYLDLSYNAVSGSIPLGYGAMGYLQVLNLGHNLLTGTIPDS 682
Query: 507 LGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLT 566
G L + LD+S N L G +P ++ LS L L ++ N L G +P G
Sbjct: 683 FGGLKAIGVLDLSHNDLQGFLPGSLGGLSFLSDLDVSNNNLTGPIPFGGQLTTFPLTRYA 742
Query: 567 GNKDLCGKIIGSNCQVKTFGKLALLHAFGLA---GLVVGCVFIVLTTVIALRKQIKRRSR 623
N LCG + C + + H + G+ G VF + ++ L + R +
Sbjct: 743 NNSGLCGVPL-PPCSSGSRPTRSHAHPKKQSIATGMSAGIVFSFMC-IVMLIMALYRARK 800
Query: 624 CSDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCK 683
E+ E + S S EPLSIN+A FE+PL +LT H+LEATN F
Sbjct: 801 VQKKEKQREKYIESLPTSGSSSWKLSSVHEPLSINVATFEKPLRKLTFAHLLEATNGFSA 860
Query: 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGY 743
++IG GGFG VYKA L DG VA+KKL Q QG REF AEMET+GK+KH+NLVPLLGY
Sbjct: 861 DSMIGSGGFGDVYKAKLADGSVVAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGY 920
Query: 744 CSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEV-LGWDKRYKIACGAARGLAFLHHGFTPH 802
C EE+LLVYEYM GSL+ L +T + L W R KIA GAARGLAFLHH PH
Sbjct: 921 CKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPH 980
Query: 803 IIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS-TDIAGTFGYIPPEYGQSGRST 861
IIHRD+K+SN+LL+++F A+V+DFG+ARL+SA +TH+S + +AGT GY+PPEY QS R T
Sbjct: 981 IIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCT 1040
Query: 862 TRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADS 921
+GDVYS+GVILLEL++GK+P PE + E NLVGW Q ++ + A++LDP ++T S
Sbjct: 1041 AKGDVYSYGVILLELLSGKKPIDPE-EFGEDNNLVGWAKQLYREKRGAEILDPELVTDKS 1099
Query: 922 KPM-MLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+ +L L+IA CL D P RPTM+ V+ KE+
Sbjct: 1100 GDVELLHYLKIASQCLDDRPFKRPTMIQVMTMFKEL 1135
|
Receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates. Binds brassinolide. Regulates, in response to brassinosteroid binding, a signaling cascade involved in plant development. May be involved in cell growth and vascular differentiation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9ZPS9|BRL2_ARATH Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 548 bits (1412), Expect = e-155, Method: Compositional matrix adjust.
Identities = 380/1023 (37%), Positives = 537/1023 (52%), Gaps = 118/1023 (11%)
Query: 2 LSFNALSGSLPEEL--SDLPILTFAAEKNQLSGSLPSW---LGNWNQMESLLLSSNQFIG 56
LS+N +G LP +L S + T N ++G + L + M L S N G
Sbjct: 159 LSYNNFTGKLPNDLFLSSKKLQTLDLSYNNITGPISGLTIPLSSCVSMTYLDFSGNSISG 218
Query: 57 KIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIE-GVFEKCSN 115
I + NC+ LKS++LS N G IP+ + L+ +DL N LTG I + + C +
Sbjct: 219 YISDSLINCTNLKSLNLSYNNFDGQIPKSFGELKLLQSLDLSHNRLTGWIPPEIGDTCRS 278
Query: 116 LSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLE 174
L L + N+ G IPE LS L LDL +NN +G P +I S
Sbjct: 279 LQNLRLSYNNFTGVIPESLSSCSWLQSLDLSNNNISGPFPNTILRS-------------- 324
Query: 175 GSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELG-DCI 233
+L+ L+L+NN++ G P I +L + D +SN F G+IP +L
Sbjct: 325 ---------FGSLQILLLSNNLISGDFPTSISACKSLRIADFSSNRFSGVIPPDLCPGAA 375
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293
SL L L +N ++G IP I+ ++L+ + LS N L+G IP P++ +Q
Sbjct: 376 SLEELRLPDNLVTGEIPPAISQCSELRTIDLSLNYLNGTIP------------PEIGNLQ 423
Query: 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQL 353
F YN ++G IP E+G + DL+LNNN L+G+IP +N+ + + N+L
Sbjct: 424 KLEQFIAWYNNIAGEIPPEIGKLQNLKDLILNNNQLTGEIPPEFFNCSNIEWVSFTSNRL 483
Query: 354 TGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNL- 412
TG +P +FG +L L LGNN TG IP LG LV L+L N L+G++P G
Sbjct: 484 TGEVPKDFGILSRLAVLQLGNNNFTGEIPPELGKCTTLVWLDLNTNHLTGEIPPRLGRQP 543
Query: 413 --KELTHLDLSFN-------------------ELDGQLPSSLSNILNLVGLYLQHNKLSG 451
K L+ L LS N E G P L I +L SG
Sbjct: 544 GSKALSGL-LSGNTMAFVRNVGNSCKGVGGLVEFSGIRPERLLQIPSLKSCDFTR-MYSG 601
Query: 452 PVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLM 511
P+ LF+ I +++S N G +P +G + L L+L N+ +GEIP +G L
Sbjct: 602 PILSLFTRYQT--IEYLDLSYNQLRGKIPDEIGEMIALQVLELSHNQLSGEIPFTIGQLK 659
Query: 512 QLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDL 571
L D S NRL GQIPE+ +LS L+ + L+ N L G +P+ G L N L
Sbjct: 660 NLGVFDASDNRLQGQIPESFSNLSFLVQIDLSNNELTGPIPQRGQLSTLPATQYANNPGL 719
Query: 572 CGKII-----GSN-----CQVKTFGKLALLHAFGLAGLVVG--------CVFIVLTTVIA 613
CG + G+N + K A +V+G C+ IV +
Sbjct: 720 CGVPLPECKNGNNQLPAGTEEGKRAKHGTRAASWANSIVLGVLISAASVCILIVWAIAVR 779
Query: 614 LRKQIKRRSRCSDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSINIAMFEQPLMRLTLVH 673
R++ ++ + +NS + + + KEPLSIN+A F++ L +L
Sbjct: 780 ARRRDADDAKMLHSLQ----AVNSATTWKI-----EKEKEPLSINVATFQRQLRKLKFSQ 830
Query: 674 ILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK 733
++EATN F ++IG GGFG V+KA L DG +VA+KKL + QG REF AEMETLGK+K
Sbjct: 831 LIEATNGFSAASMIGHGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIK 890
Query: 734 HQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRN-RTG-SLEVLGWDKRYKIACGAARG 791
H+NLVPLLGYC EE+LLVYE+M GSL+ L RTG +LGW++R KIA GAA+G
Sbjct: 891 HRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKG 950
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS-TDIAGTFGYI 850
L FLHH PHIIHRD+K+SN+LL+++ EA+V+DFG+ARLISA +TH+S + +AGT GY+
Sbjct: 951 LCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVSTLAGTPGYV 1010
Query: 851 PPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGP-EFKDIEGGNLVGWVFQKMKKGQAA 909
PPEY QS R T +GDVYS GV++LE+++GK PT EF D NLVGW K ++G+
Sbjct: 1011 PPEYYQSFRCTAKGDVYSIGVVMLEILSGKRPTDKEEFGDT---NLVGWSKMKAREGKHM 1067
Query: 910 DVLDPTVLTADSKPM---------------MLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954
+V+D +L S ML+ L IA C+ D P+ RP ML V+ L+
Sbjct: 1068 EVIDEDLLKEGSSESLNEKEGFEGGVIVKEMLRYLEIALRCVDDFPSKRPNMLQVVASLR 1127
Query: 955 EIK 957
E++
Sbjct: 1128 ELR 1130
|
Receptor with a serine/threonine-protein kinase activity, which may transduce extracellular spatial and temporal signals into downstream cell differentiation responses in provascular and procambial cells. In contrast to BRI1, BRL1 and BRL3, it does not bind brassinolide. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LVP0|Y5639_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g63930 OS=Arabidopsis thaliana GN=At5g63930 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 545 bits (1404), Expect = e-154, Method: Compositional matrix adjust.
Identities = 355/973 (36%), Positives = 526/973 (54%), Gaps = 69/973 (7%)
Query: 5 NALSGSLPEELSDLPILT-FAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIG 63
N +SGSLP E+ +L L+ N +SG LP +GN ++ S N G +P EIG
Sbjct: 155 NRISGSLPVEIGNLLSLSQLVTYSNNISGQLPRSIGNLKRLTSFRAGQNMISGSLPSEIG 214
Query: 64 NCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFR 123
C L + L+ N LSG +P+E+ + L ++ L N +G I C++L L +++
Sbjct: 215 GCESLVMLGLAQNQLSGELPKEIGMLKKLSQVILWENEFSGFIPREISNCTSLETLALYK 274
Query: 124 NHIYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVG 182
N + G IP+ L L L L L N G IP I N +E + N L G +P E+G
Sbjct: 275 NQLVGPIPKELGDLQSLEFLYLYRNGLNGTIPREIGNLSYAIEIDFSENALTGEIPLELG 334
Query: 183 NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGN 242
N LE L L N L G +P E+ L LS LDL+ N G IP L L L
Sbjct: 335 NIEGLELLYLFENQLTGTIPVELSTLKNLSKLDLSINALTGPIPLGFQYLRGLFMLQLFQ 394
Query: 243 NNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSY 302
N+LSG IP K+ + L L +S N+LSG IPS L + + +L
Sbjct: 395 NSLSGTIPPKLGWYSDLWVLDMSDNHLSGRIPSY------------LCLHSNMIILNLGT 442
Query: 303 NRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFG 362
N LSG IP + +C +V L L N L G+ P +L + N+T ++L +N+ G IP E G
Sbjct: 443 NNLSGNIPTGITTCKTLVQLRLARNNLVGRFPSNLCKQVNVTAIELGQNRFRGSIPREVG 502
Query: 363 DSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSF 422
+ LQ L L +N TG +P +G L L LN++ NKL+G+VP+ N K L LD+
Sbjct: 503 NCSALQRLQLADNGFTGELPREIGMLSQLGTLNISSNKLTGEVPSEIFNCKMLQRLDMCC 562
Query: 423 NELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRS 482
N G LPS + ++ L L L +N LSG + N + ++ + M NLF+G +PR
Sbjct: 563 NNFSGTLPSEVGSLYQLELLKLSNNNLSGTIPVALGNLS--RLTELQMGGNLFNGSIPRE 620
Query: 483 LGNLSYLT-NLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLS 541
LG+L+ L L+L NK TGEIPP+L NL+ LE+L ++ N L G+IP + +LS+LL +
Sbjct: 621 LGSLTGLQIALNLSYNKLTGEIPPELSNLVMLEFLLLNNNNLSGEIPSSFANLSSLLGYN 680
Query: 542 LAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTF---------GKLALLH 592
+ N L G +P + +N+S S GN+ LCG + Q + F G +
Sbjct: 681 FSYNSLTGPIP---LLRNISMSSFIGNEGLCGPPLNQCIQTQPFAPSQSTGKPGGMRSSK 737
Query: 593 AFGLAGLVVGCVFIVLTTVIA--LRKQIKRRSRCSDPEEIEETKLNSFSDHNLYFLSSSR 650
+ V+G V ++L +I +R+ ++ + SS++
Sbjct: 738 IIAITAAVIGGVSLMLIALIVYLMRRPVRTVA------------------------SSAQ 773
Query: 651 SKEPLSINIAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKK 710
+P +++ ++ P T ++ AT+NF ++ ++G G GTVYKA LP G T+AVKK
Sbjct: 774 DGQPSEMSLDIYFPPKEGFTFQDLVAATDNFDESFVVGRGACGTVYKAVLPAGYTLAVKK 833
Query: 711 LSQAKTQGHR-----EFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLW 765
L+ G+ F AE+ TLG ++H+N+V L G+C+ LL+YEYM GSL
Sbjct: 834 LASNHEGGNNNNVDNSFRAEILTLGNIRHRNIVKLHGFCNHQGSNLLLYEYMPKGSLGEI 893
Query: 766 LRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVAD 825
L + + +L+ W KR+KIA GAA+GLA+LHH P I HRDIK++NILL+++FEA V D
Sbjct: 894 LHDPSCNLD---WSKRFKIALGAAQGLAYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGD 950
Query: 826 FGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGP 885
FGLA++I + + IAG++GYI PEY + + T + D+YS+GV+LLEL+TGK P P
Sbjct: 951 FGLAKVIDMPHSKSMSAIAGSYGYIAPEYAYTMKVTEKSDIYSYGVVLLELLTGKAPVQP 1010
Query: 886 EFKDIEGGNLVGWVFQKMKKGQ-AADVLDPTVLTADSKPM--MLKMLRIAGDCLSDNPAM 942
+GG++V WV +++ ++ VLD + D + + ML +L+IA C S +P
Sbjct: 1011 ---IDQGGDVVNWVRSYIRRDALSSGVLDARLTLEDERIVSHMLTVLKIALLCTSVSPVA 1067
Query: 943 RPTMLHVLKFLKE 955
RP+M V+ L E
Sbjct: 1068 RPSMRQVVLMLIE 1080
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O22476|BRI1_ARATH Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 533 bits (1374), Expect = e-150, Method: Compositional matrix adjust.
Identities = 387/1026 (37%), Positives = 551/1026 (53%), Gaps = 105/1026 (10%)
Query: 7 LSGSLPEELSDLPILTFAAEKNQLSGS-LPSWL--GNWNQMESLLLSSNQFIGKIPPEIG 63
+SG L +L+ L +L +A N +SG+ + W+ +++ L +S N+ G + ++
Sbjct: 166 VSGGL--KLNSLEVLDLSA--NSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVS 219
Query: 64 NCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFR 123
C L+ + +S+N S IP L +L+ +D+ GN L+G C+ L L I
Sbjct: 220 RCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 278
Query: 124 NHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNS-ETLMEFSAANNLLEGSLPYEVG 182
N G IP K L L L N FTG IP + + +TL + N G++P G
Sbjct: 279 NQFVGPIPPLPLK-SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFG 337
Query: 183 NAAALERLVLTNNMLKGHLPKE-IGNLSALSVLDLNSNLFDGIIPYELGD-CISLTTLDL 240
+ + LE L L++N G LP + + + L VLDL+ N F G +P L + SL TLDL
Sbjct: 338 SCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDL 397
Query: 241 GNNNLSGLIPEKIADLAQ-----LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHH 295
+NN SG I + +L Q LQ L L +N +G IP P LS
Sbjct: 398 SSNNFSGPI---LPNLCQNPKNTLQELYLQNNGFTGKIP------------PTLSNCSEL 442
Query: 296 GVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTG 355
LS+N LSG IP LGS + DL L NML G+IP L + L TL L N LTG
Sbjct: 443 VSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 502
Query: 356 PIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKEL 415
IPS + L + L NN+LTG IP +G L L L L+ N SG +P G+ + L
Sbjct: 503 EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL 562
Query: 416 THLDLSFNELDGQLPSSL--------------------------------SNILNLVGLY 443
LDL+ N +G +P+++ N+L G+
Sbjct: 563 IWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIR 622
Query: 444 LQH-NKLS-------------GPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYL 489
+ N+LS G F N+ + + ++MS N+ G +P+ +G++ YL
Sbjct: 623 SEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGS--MMFLDMSYNMLSGYIPKEIGSMPYL 680
Query: 490 TNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEG 549
L+L N +G IP ++G+L L LD+S N+L G+IP+ M +L+ L + L+ N L G
Sbjct: 681 FILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 740
Query: 550 MVPRSGICQNLSKISLTGNKDLCGKII---------GSNCQVKTFGKLALLHAFGLA-GL 599
+P G + N LCG + G ++ G+ A +A GL
Sbjct: 741 PIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPSNADGYAHHQRSHGRRPASLAGSVAMGL 800
Query: 600 VVGCVFIVLTTVIALRKQIKRRSRCSDPEEIEETKLNS---FSDHNLYFLSSSRSKEPLS 656
+ V I ++ + +RR + ++ E E NS +++ + L+ KE LS
Sbjct: 801 LFSFVCIFGLILVGREMRKRRRKKEAELEMYAEGHGNSGDRTANNTNWKLTGV--KEALS 858
Query: 657 INIAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKT 716
IN+A FE+PL +LT +L+ATN F ++IG GGFG VYKA L DG VA+KKL
Sbjct: 859 INLAAFEKPLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSG 918
Query: 717 QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVL 776
QG REF AEMET+GK+KH+NLVPLLGYC +E+LLVYE+M GSL+ L + + L
Sbjct: 919 QGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKL 978
Query: 777 GWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836
W R KIA G+ARGLAFLHH +PHIIHRD+K+SN+LL+E EA+V+DFG+ARL+SA +
Sbjct: 979 NWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMD 1038
Query: 837 THVS-TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPT-GPEFKDIEGGN 894
TH+S + +AGT GY+PPEY QS R +T+GDVYS+GV+LLEL+TGK PT P+F D N
Sbjct: 1039 THLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSPDFGD---NN 1095
Query: 895 LVGWVFQKMKKGQAADVLDPTVLTADS--KPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952
LVGWV Q K + +DV DP ++ D + +L+ L++A CL D RPTM+ V+
Sbjct: 1096 LVGWVKQHAKL-RISDVFDPELMKEDPALEIELLQHLKVAVACLDDRAWRRPTMVQVMAM 1154
Query: 953 LKEIKV 958
KEI+
Sbjct: 1155 FKEIQA 1160
|
Receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates. Regulates, in response to brassinosteroid binding, a signaling cascade involved in plant development, including expression of light- and stress-regulated genes, promotion of cell elongation, normal leaf and chloroplast senescence, and flowering. Binds brassinolide, and less effectively castasterone, but not 2,3,22,23-O-tetramethylbrassinolide or ecdysone. May be involved in a feedback regulation of brassinosteroid biosynthesis. Phosphorylates BRI1-associated receptor kinase 1 (BAK1), Transthyretin-Like protein (TTL) and SERK1 on 'Ser-299' and 'Thr-462' in vitro. May have a guanylyl cyclase activity. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49318|Y2317_ARATH Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 519 bits (1336), Expect = e-146, Method: Compositional matrix adjust.
Identities = 348/979 (35%), Positives = 508/979 (51%), Gaps = 72/979 (7%)
Query: 5 NALSGSLPEELSDLPILT-FAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIG 63
N LSG LPEE+ DL L A N L+G LP LGN N++ + N F G IP EIG
Sbjct: 167 NKLSGPLPEEIGDLYNLEELVAYTNNLTGPLPRSLGNLNKLTTFRAGQNDFSGNIPTEIG 226
Query: 64 NCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFR 123
C LK + L+ NF+SG +P+E+ L+E+ L N +G I ++L L ++
Sbjct: 227 KCLNLKLLGLAQNFISGELPKEIGMLVKLQEVILWQNKFSGFIPKDIGNLTSLETLALYG 286
Query: 124 NHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVG 182
N + G IP + + L L L N G IP + +ME + NLL G +P E+
Sbjct: 287 NSLVGPIPSEIGNMKSLKKLYLYQNQLNGTIPKELGKLSKVMEIDFSENLLSGEIPVELS 346
Query: 183 NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGN 242
+ L L L N L G +P E+ L L+ LDL+ N G IP + S+ L L +
Sbjct: 347 KISELRLLYLFQNKLTGIIPNELSKLRNLAKLDLSINSLTGPIPPGFQNLTSMRQLQLFH 406
Query: 243 NNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSY 302
N+LSG+IP+ + + L + S N LSG IP +Q+N+ + +L
Sbjct: 407 NSLSGVIPQGLGLYSPLWVVDFSENQLSGKIPP---FICQQSNLI---------LLNLGS 454
Query: 303 NRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFG 362
NR+ G IP + C ++ L + N L+G+ P L +L NL+ ++L +N+ +GP+P E G
Sbjct: 455 NRIFGNIPPGVLRCKSLLQLRVVGNRLTGQFPTELCKLVNLSAIELDQNRFSGPLPPEIG 514
Query: 363 DSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSF 422
KLQ L+L NQ + ++P + L LV N++ N L+G +P+ N K L LDLS
Sbjct: 515 TCQKLQRLHLAANQFSSNLPNEISKLSNLVTFNVSSNSLTGPIPSEIANCKMLQRLDLSR 574
Query: 423 NELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRS 482
N G LP L ++ L L L N+ SG + F+ + + M NLF G +P
Sbjct: 575 NSFIGSLPPELGSLHQLEILRLSENRFSGNIP--FTIGNLTHLTELQMGGNLFSGSIPPQ 632
Query: 483 LGNLSYLT-NLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLS 541
LG LS L ++L N F+GEIPP++GNL L YL ++ N L G+IP T +LS+LL +
Sbjct: 633 LGLLSSLQIAMNLSYNDFSGEIPPEIGNLHLLMYLSLNNNHLSGEIPTTFENLSSLLGCN 692
Query: 542 LAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGS-NCQVKTFGKLALLHA------- 593
+ N L G +P + I QN++ S GNK LCG + S + ++ ++ L A
Sbjct: 693 FSYNNLTGQLPHTQIFQNMTLTSFLGNKGLCGGHLRSCDPSHSSWPHISSLKAGSARRGR 752
Query: 594 ---FGLAGLVVGCVFIVLTTVIALRKQIKRRS-RCSDPEEIEETKLNSFSDHNLYFLSSS 649
+ + + ++ V LR ++ + D E F + ++YF+
Sbjct: 753 IIIIVSSVIGGISLLLIAIVVHFLRNPVEPTAPYVHDKEPF-------FQESDIYFV--- 802
Query: 650 RSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVK 709
P R T+ ILEAT F + I+G G GTVYKA +P GKT+AVK
Sbjct: 803 ---------------PKERFTVKDILEATKGFHDSYIVGRGACGTVYKAVMPSGKTIAVK 847
Query: 710 KLS-------QAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD--EEKLLVYEYMVNG 760
KL F AE+ TLGK++H+N+V L +C LL+YEYM G
Sbjct: 848 KLESNREGNNNNSNNTDNSFRAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRG 907
Query: 761 SLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE 820
SL L G + W R+ IA GAA GLA+LHH P IIHRDIK++NIL++E FE
Sbjct: 908 SLGELLHG--GKSHSMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFE 965
Query: 821 AKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK 880
A V DFGLA++I + + +AG++GYI PEY + + T + D+YSFGV+LLEL+TGK
Sbjct: 966 AHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGK 1025
Query: 881 EPTGPEFKDIEGGNLVGWVFQKMKKGQ-AADVLDPTVLTADSKPM---MLKMLRIAGDCL 936
P P +GG+L W ++ +++LDP + + + M+ + +IA C
Sbjct: 1026 APVQPLE---QGGDLATWTRNHIRDHSLTSEILDPYLTKVEDDVILNHMITVTKIAVLCT 1082
Query: 937 SDNPAMRPTMLHVLKFLKE 955
+P+ RPTM V+ L E
Sbjct: 1083 KSSPSDRPTMREVVLMLIE 1101
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SHI2|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 518 bits (1333), Expect = e-145, Method: Compositional matrix adjust.
Identities = 347/999 (34%), Positives = 521/999 (52%), Gaps = 87/999 (8%)
Query: 2 LSFNALSGSLPEELSDLPILT-FAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
L N G +P +L+ + L +N L GS+P +GN + ++ L++ SN G IPP
Sbjct: 122 LCTNRFHGVIPIQLTMIITLKKLYLCENYLFGSIPRQIGNLSSLQELVIYSNNLTGVIPP 181
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
+ L+ I N SG IP E+ ESL+ + L NLL G++ EK NL+ L+
Sbjct: 182 SMAKLRQLRIIRAGRNGFSGVIPSEISGCESLKVLGLAENLLEGSLPKQLEKLQNLTDLI 241
Query: 121 IFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPY 179
+++N + G IP + + L VL L N FTG IP I + N L G +P
Sbjct: 242 LWQNRLSGEIPPSVGNISRLEVLALHENYFTGSIPREIGKLTKMKRLYLYTNQLTGEIPR 301
Query: 180 EVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLD 239
E+GN + + N L G +PKE G++ L +L L N+ G IP ELG+ L LD
Sbjct: 302 EIGNLIDAAEIDFSENQLTGFIPKEFGHILNLKLLHLFENILLGPIPRELGELTLLEKLD 361
Query: 240 LGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFD 299
L N L+G IP+++ L L L L N L G IP P + F + V D
Sbjct: 362 LSINRLNGTIPQELQFLPYLVDLQLFDNQLEGKIP------------PLIGFYSNFSVLD 409
Query: 300 LSYNRLSGPIP------------------------EELGSCVVVVDLLLNNNMLSGKIPG 335
+S N LSGPIP +L +C + L+L +N L+G +P
Sbjct: 410 MSANSLSGPIPAHFCRFQTLILLSLGSNKLSGNIPRDLKTCKSLTKLMLGDNQLTGSLPI 469
Query: 336 SLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLN 395
L L NLT L+L +N L+G I ++ G L+ L L NN TG IP +G+L +V N
Sbjct: 470 ELFNLQNLTALELHQNWLSGNISADLGKLKNLERLRLANNNFTGEIPPEIGNLTKIVGFN 529
Query: 396 LTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDE 455
++ N+L+G +P G+ + LDLS N+ G + L ++ L L L N+L+G +
Sbjct: 530 ISSNQLTGHIPKELGSCVTIQRLDLSGNKFSGYIAQELGQLVYLEILRLSDNRLTGEIPH 589
Query: 456 LFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLT-NLDLHENKFTGEIPPDLGNLMQLE 514
F + ++ + + NL +P LG L+ L +L++ N +G IP LGNL LE
Sbjct: 590 SFGDLT--RLMELQLGGNLLSENIPVELGKLTSLQISLNISHNNLSGTIPDSLGNLQMLE 647
Query: 515 YLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGK 574
L ++ N+L G+IP ++ +L +LL +++ N L G VP + + Q + + GN LC
Sbjct: 648 ILYLNDNKLSGEIPASIGNLMSLLICNISNNNLVGTVPDTAVFQRMDSSNFAGNHGLCNS 707
Query: 575 IIGSNCQV---KTFGKLALL-------HAFGLAGLVVGCVFIVLTTVIALRKQIKRRSRC 624
S+CQ + KL L + +V+G VF++ T + L IKRR
Sbjct: 708 Q-RSHCQPLVPHSDSKLNWLINGSQRQKILTITCIVIGSVFLI--TFLGLCWTIKRR--- 761
Query: 625 SDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKT 684
+P F++ +P ++ F P T +++AT NF +
Sbjct: 762 -EPA----------------FVALEDQTKPDVMDSYYF--PKKGFTYQGLVDATRNFSED 802
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQG---HREFTAEMETLGKVKHQNLVPLL 741
++G G GTVYKA + G+ +AVKKL+ ++ +G F AE+ TLGK++H+N+V L
Sbjct: 803 VVLGRGACGTVYKAEMSGGEVIAVKKLN-SRGEGASSDNSFRAEISTLGKIRHRNIVKLY 861
Query: 742 GYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP 801
G+C LL+YEYM GSL L+ R +L W+ RY+IA GAA GL +LHH P
Sbjct: 862 GFCYHQNSNLLLYEYMSKGSLGEQLQ-RGEKNCLLDWNARYRIALGAAEGLCYLHHDCRP 920
Query: 802 HIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRST 861
I+HRDIK++NILL+E F+A V DFGLA+LI + + +AG++GYI PEY + + T
Sbjct: 921 QIVHRDIKSNNILLDERFQAHVGDFGLAKLIDLSYSKSMSAVAGSYGYIAPEYAYTMKVT 980
Query: 862 TRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG-QAADVLDPTVLTAD 920
+ D+YSFGV+LLEL+TGK P P +GG+LV WV + ++ ++ D + T D
Sbjct: 981 EKCDIYSFGVVLLELITGKPPVQPLE---QGGDLVNWVRRSIRNMIPTIEMFDARLDTND 1037
Query: 921 SKPM--MLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957
+ + M +L+IA C S++PA RPTM V+ + E +
Sbjct: 1038 KRTVHEMSLVLKIALFCTSNSPASRPTMREVVAMITEAR 1076
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 959 | ||||||
| 225455406 | 1299 | PREDICTED: leucine-rich repeat receptor | 1.0 | 0.738 | 0.784 | 0.0 | |
| 255539505 | 1303 | leucine-rich repeat receptor protein kin | 0.881 | 0.648 | 0.772 | 0.0 | |
| 356574479 | 1268 | PREDICTED: leucine-rich repeat receptor | 0.997 | 0.754 | 0.736 | 0.0 | |
| 449527203 | 1298 | PREDICTED: leucine-rich repeat receptor | 0.912 | 0.674 | 0.740 | 0.0 | |
| 449446181 | 1298 | PREDICTED: leucine-rich repeat receptor | 0.912 | 0.674 | 0.741 | 0.0 | |
| 356534151 | 1269 | PREDICTED: leucine-rich repeat receptor | 0.997 | 0.754 | 0.733 | 0.0 | |
| 224120068 | 1237 | predicted protein [Populus trichocarpa] | 0.956 | 0.741 | 0.723 | 0.0 | |
| 224136952 | 1215 | predicted protein [Populus trichocarpa] | 0.931 | 0.734 | 0.723 | 0.0 | |
| 297806755 | 1180 | extra sporogenous cells [Arabidopsis lyr | 0.941 | 0.765 | 0.649 | 0.0 | |
| 302788101 | 1339 | hypothetical protein SELMODRAFT_103725 [ | 0.962 | 0.689 | 0.556 | 0.0 |
| >gi|225455406|ref|XP_002273978.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1503 bits (3892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 753/960 (78%), Positives = 844/960 (87%), Gaps = 1/960 (0%)
Query: 1 MLSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
MLSFN++SGSLPEELS+LP+L+F+AEKNQLSG LPSWLG WN ++SLLLSSN+F G+IPP
Sbjct: 340 MLSFNSISGSLPEELSELPMLSFSAEKNQLSGPLPSWLGKWNGIDSLLLSSNRFSGRIPP 399
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
EIGNCSML +SLSNN LSGSIP+ELC +ESL EIDLD N L+G I+ F KC NL+QLV
Sbjct: 400 EIGNCSMLNHVSLSNNLLSGSIPKELCNAESLMEIDLDSNFLSGGIDDTFLKCKNLTQLV 459
Query: 121 IFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180
+ N I GSIPEYLS+LPLMVLDLDSNNFTG IPVS+WN +LMEFSAANNLLEGSLP E
Sbjct: 460 LVNNQIVGSIPEYLSELPLMVLDLDSNNFTGSIPVSLWNLVSLMEFSAANNLLEGSLPPE 519
Query: 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDL 240
+GNA ALERLVL+NN LKG +P+EIGNL++LSVL+LN NL +GIIP ELGDCISLTTLDL
Sbjct: 520 IGNAVALERLVLSNNRLKGTIPREIGNLTSLSVLNLNLNLLEGIIPMELGDCISLTTLDL 579
Query: 241 GNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDL 300
GNN L+G IP++IADLAQLQCLVLSHN+LSG IPSKPSSYFRQ N+PD SF+QHHGV+DL
Sbjct: 580 GNNLLNGSIPDRIADLAQLQCLVLSHNDLSGSIPSKPSSYFRQVNIPDSSFVQHHGVYDL 639
Query: 301 SYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSE 360
SYNRLSG IPEELGSCVVVVDLLL+NN LSG+IP SLSRLTNLTTLDLS N LTG IP +
Sbjct: 640 SYNRLSGSIPEELGSCVVVVDLLLSNNFLSGEIPISLSRLTNLTTLDLSGNLLTGSIPLK 699
Query: 361 FGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDL 420
G S+KLQGLYLGNNQLTG+IP SLG L LVKLNLTGN+LSG +P SFGNL LTH DL
Sbjct: 700 LGYSLKLQGLYLGNNQLTGTIPESLGRLSSLVKLNLTGNQLSGSIPFSFGNLTGLTHFDL 759
Query: 421 SFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLP 480
S NELDG+LPS+LS+++NLVGLY+Q N+LSG V +LF NS AW+I T+N+S N F+GGLP
Sbjct: 760 SSNELDGELPSALSSMVNLVGLYVQQNRLSGQVSKLFMNSIAWRIETLNLSWNFFNGGLP 819
Query: 481 RSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYL 540
RSLGNLSYLTNLDLH N FTGEIP +LG+LMQLEY DVS NRLCGQIPE +CSL NLLYL
Sbjct: 820 RSLGNLSYLTNLDLHHNMFTGEIPTELGDLMQLEYFDVSGNRLCGQIPEKICSLVNLLYL 879
Query: 541 SLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTFG-KLALLHAFGLAGL 599
+LAENRLEG +PRSG+CQNLSK SL GNKDLCG+ +G CQ KTFG K +L++ + LAG+
Sbjct: 880 NLAENRLEGSIPRSGVCQNLSKDSLAGNKDLCGRNLGLECQFKTFGRKSSLVNTWVLAGI 939
Query: 600 VVGCVFIVLTTVIALRKQIKRRSRCSDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSINI 659
VVGC I LT LRK + R SR SD EEIEE+KLNS D NLYFLSSSRSKEPLSIN+
Sbjct: 940 VVGCTLITLTIAFGLRKWVIRNSRQSDTEEIEESKLNSSIDQNLYFLSSSRSKEPLSINV 999
Query: 660 AMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGH 719
AMFEQPL++LTLV ILEATNNFCKTN+IGDGGFGTVYKAALP+GK VAVKKL+QAKTQGH
Sbjct: 1000 AMFEQPLLKLTLVDILEATNNFCKTNVIGDGGFGTVYKAALPNGKIVAVKKLNQAKTQGH 1059
Query: 720 REFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWD 779
REF AEMETLGKVKH+NLVPLLGYCSF EEK LVYEYMVNGSLDLWLRNRTG+LE L W
Sbjct: 1060 REFLAEMETLGKVKHRNLVPLLGYCSFGEEKFLVYEYMVNGSLDLWLRNRTGALEALDWT 1119
Query: 780 KRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839
KR+KIA GAARGLAFLHHGF PHIIHRDIKASNILLNE+FEAKVADFGLARLISACETHV
Sbjct: 1120 KRFKIAMGAARGLAFLHHGFIPHIIHRDIKASNILLNEDFEAKVADFGLARLISACETHV 1179
Query: 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWV 899
STDIAGTFGYIPPEYG S RSTTRGDVYSFGVILLELVTGKEPTGP+FKD EGGNLVGWV
Sbjct: 1180 STDIAGTFGYIPPEYGLSWRSTTRGDVYSFGVILLELVTGKEPTGPDFKDFEGGNLVGWV 1239
Query: 900 FQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
F+KM+KG+AA+VLDPTV+ A+ K +ML++L+IA CLS+NPA RPTMLHVLKFLK IK E
Sbjct: 1240 FEKMRKGEAAEVLDPTVVRAELKHIMLQILQIAAICLSENPAKRPTMLHVLKFLKGIKDE 1299
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255539505|ref|XP_002510817.1| leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis] gi|223549932|gb|EEF51419.1| leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1498 bits (3879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 741/959 (77%), Positives = 830/959 (86%)
Query: 1 MLSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
MLSFN+LSGSLPEEL LP+LTF+AEKNQLSG LPSWLG WN ME L LSSN+F GK+PP
Sbjct: 343 MLSFNSLSGSLPEELFQLPMLTFSAEKNQLSGPLPSWLGRWNHMEWLFLSSNEFSGKLPP 402
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
EIGNCS LK ISLSNN L+G IPRELC + SL EIDLDGN +GTI+ VF C NL+QLV
Sbjct: 403 EIGNCSSLKHISLSNNLLTGKIPRELCNAVSLMEIDLDGNFFSGTIDDVFPNCGNLTQLV 462
Query: 121 IFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180
+ N I GSIPEYL++LPLMVLDLDSNNFTG IPVS+W S +LMEFSA+NNLL GSLP E
Sbjct: 463 LVDNQITGSIPEYLAELPLMVLDLDSNNFTGAIPVSLWKSTSLMEFSASNNLLGGSLPME 522
Query: 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDL 240
+GNA L+RLVL++N LKG +PKEIG L++LSVL+LNSNL +G IP ELGDCI+LTTLDL
Sbjct: 523 IGNAVQLQRLVLSSNQLKGTVPKEIGKLTSLSVLNLNSNLLEGDIPVELGDCIALTTLDL 582
Query: 241 GNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDL 300
GNN L+G IPE + DL +LQCLVLS+NNLSG IPSK S YFRQAN+PD SF+QHHGVFDL
Sbjct: 583 GNNRLTGSIPESLVDLVELQCLVLSYNNLSGSIPSKSSLYFRQANIPDSSFLQHHGVFDL 642
Query: 301 SYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSE 360
S+N LSG IPEELG+ +V+VDLL+NNNMLSG IP SLSRLTNLTTLDLS N L+GPIP E
Sbjct: 643 SHNMLSGSIPEELGNLLVIVDLLINNNMLSGAIPRSLSRLTNLTTLDLSGNVLSGPIPLE 702
Query: 361 FGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDL 420
FG S KLQGLYLG NQL+G+IP +LG LG LVKLNLTGNKL G VP SFGNLKELTHLDL
Sbjct: 703 FGHSSKLQGLYLGKNQLSGAIPETLGGLGSLVKLNLTGNKLYGSVPLSFGNLKELTHLDL 762
Query: 421 SFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLP 480
S N+L GQLPSSLS +LNLV LY+Q N+LSGP+DEL SNS AW+I TMN+SNN FDG LP
Sbjct: 763 SNNDLVGQLPSSLSQMLNLVELYVQLNRLSGPIDELLSNSMAWRIETMNLSNNFFDGDLP 822
Query: 481 RSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYL 540
RSLGNLSYLT LDLH NK TGEIPP+LGNLMQL+Y DVS NRL GQIPE +C+L NL YL
Sbjct: 823 RSLGNLSYLTYLDLHGNKLTGEIPPELGNLMQLQYFDVSGNRLSGQIPEKICTLVNLFYL 882
Query: 541 SLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTFGKLALLHAFGLAGLV 600
+ AEN LEG VPRSGIC +LSKISL GNK+LCG+I GS C+++ FG+L+LL+A+GLAG+
Sbjct: 883 NFAENNLEGPVPRSGICLSLSKISLAGNKNLCGRITGSACRIRNFGRLSLLNAWGLAGVA 942
Query: 601 VGCVFIVLTTVIALRKQIKRRSRCSDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSINIA 660
VGC+ I+L LR+ R SR DPE+IEE+KL+SF D NLYFLSSSRSKEPLSINIA
Sbjct: 943 VGCMIIILGIAFVLRRWTTRGSRQGDPEDIEESKLSSFIDQNLYFLSSSRSKEPLSINIA 1002
Query: 661 MFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHR 720
MFEQPL+++TLV ILEATNNFCKTNIIGDGGFGTVYKA LPDG+ VAVKKLS+AKTQG+R
Sbjct: 1003 MFEQPLLKITLVDILEATNNFCKTNIIGDGGFGTVYKAILPDGRRVAVKKLSEAKTQGNR 1062
Query: 721 EFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDK 780
EF AEMETLGKVKHQNLVPLLGYCSF EEKLLVYEYMVNGSLDLWLRNR+G+LE+L W K
Sbjct: 1063 EFIAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRSGALEILNWTK 1122
Query: 781 RYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS 840
R KIA G+ARGLAFLHHGF PHIIHRDIKASNILLNE+FE KVADFGLARLISACETHVS
Sbjct: 1123 RLKIAIGSARGLAFLHHGFIPHIIHRDIKASNILLNEDFEPKVADFGLARLISACETHVS 1182
Query: 841 TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900
TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGP+FK++EGGNLVGWVF
Sbjct: 1183 TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPDFKEVEGGNLVGWVF 1242
Query: 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
QK+KKG AADVLDPTV+ +DSK MML+ L+IA CLSDNPA RPTML VLK LK I E
Sbjct: 1243 QKIKKGHAADVLDPTVVNSDSKQMMLRALKIASRCLSDNPADRPTMLEVLKLLKGINYE 1301
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356574479|ref|XP_003555374.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1434 bits (3711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 706/959 (73%), Positives = 819/959 (85%), Gaps = 2/959 (0%)
Query: 1 MLSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
MLSFN+LSGSLPEELS+LP+L F+AEKNQL G LPSWLG W+ ++SLLLS+N+F G IPP
Sbjct: 312 MLSFNSLSGSLPEELSELPMLAFSAEKNQLHGHLPSWLGKWSNVDSLLLSANRFSGMIPP 371
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
E+GNCS L+ +SLS+N L+G IP ELC + SL E+DLD N L+G I+ VF KC NL+QLV
Sbjct: 372 ELGNCSALEHLSLSSNLLTGPIPEELCNAASLLEVDLDDNFLSGAIDNVFVKCKNLTQLV 431
Query: 121 IFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180
+ N I GSIPEYLS+LPLMVLDLDSNNF+G +P +WNS TLMEFSAANN LEGSLP E
Sbjct: 432 LLNNRIVGSIPEYLSELPLMVLDLDSNNFSGKMPSGLWNSSTLMEFSAANNRLEGSLPVE 491
Query: 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDL 240
+G+A LERLVL+NN L G +PKEIG+L +LSVL+LN N+ +G IP ELGDC SLTT+DL
Sbjct: 492 IGSAVMLERLVLSNNRLTGTIPKEIGSLKSLSVLNLNGNMLEGSIPTELGDCTSLTTMDL 551
Query: 241 GNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDL 300
GNN L+G IPEK+ +L+QLQCLVLSHN LSG IP+K SSYFRQ ++PDLSF+QH GVFDL
Sbjct: 552 GNNKLNGSIPEKLVELSQLQCLVLSHNKLSGSIPAKKSSYFRQLSIPDLSFVQHLGVFDL 611
Query: 301 SYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSE 360
S+NRLSGPIP+ELGSCVVVVDLL++NNMLSG IP SLSRLTNLTTLDLS N L+G IP E
Sbjct: 612 SHNRLSGPIPDELGSCVVVVDLLVSNNMLSGSIPRSLSRLTNLTTLDLSGNLLSGSIPQE 671
Query: 361 FGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDL 420
G +KLQGLYLG NQL+G+IP S G L LVKLNLTGNKLSG +P SF N+K LTHLDL
Sbjct: 672 LGGVLKLQGLYLGQNQLSGTIPESFGKLSSLVKLNLTGNKLSGPIPVSFQNMKGLTHLDL 731
Query: 421 SFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLP 480
S NEL G+LPSSLS + +LVG+Y+Q+N++SG V +LFSNS W+I T+N+SNN F+G LP
Sbjct: 732 SSNELSGELPSSLSGVQSLVGIYVQNNRISGQVGDLFSNSMTWRIETVNLSNNCFNGNLP 791
Query: 481 RSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYL 540
+SLGNLSYLTNLDLH N TGEIP DLG+LMQLEY DVS N+L G+IP+ +CSL NL YL
Sbjct: 792 QSLGNLSYLTNLDLHGNMLTGEIPLDLGDLMQLEYFDVSGNQLSGRIPDKLCSLVNLNYL 851
Query: 541 SLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTFGKLALLHAFGLAGLV 600
L+ NRLEG +PR+GICQNLS++ L GNK+LCG+++G NCQ K+ G+ L +A+ LA +
Sbjct: 852 DLSRNRLEGPIPRNGICQNLSRVRLAGNKNLCGQMLGINCQDKSIGRSVLYNAWRLAVIT 911
Query: 601 VGCVFIVLTTVIALRKQIKRRSRCSDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSINIA 660
V + + L+ L K I RR +DPEE++E KLNS+ DHNLYFLSSSRSKEPLSIN+A
Sbjct: 912 VTIILLTLSFAFLLHKWISRRQ--NDPEELKERKLNSYVDHNLYFLSSSRSKEPLSINVA 969
Query: 661 MFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHR 720
MFEQPL++LTLV ILEAT+NF KTNIIGDGGFGTVYKA LP+GKTVAVKKLS+AKTQGHR
Sbjct: 970 MFEQPLLKLTLVDILEATDNFSKTNIIGDGGFGTVYKATLPNGKTVAVKKLSEAKTQGHR 1029
Query: 721 EFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDK 780
EF AEMETLGKVKHQNLV LLGYCS EEKLLVYEYMVNGSLDLWLRNRTG+LE+L W+K
Sbjct: 1030 EFMAEMETLGKVKHQNLVALLGYCSIGEEKLLVYEYMVNGSLDLWLRNRTGALEILDWNK 1089
Query: 781 RYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS 840
RYKIA GAARGLAFLHHGFTPHIIHRD+KASNILL+ +FE KVADFGLARLISACETH++
Sbjct: 1090 RYKIATGAARGLAFLHHGFTPHIIHRDVKASNILLSGDFEPKVADFGLARLISACETHIT 1149
Query: 841 TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900
TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGP+FK+IEGGNLVGWV
Sbjct: 1150 TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVC 1209
Query: 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
QK+KKGQAADVLDPTVL ADSK MML+ML+IAG C+SDNPA RPTML V KFLK +K E
Sbjct: 1210 QKIKKGQAADVLDPTVLDADSKQMMLQMLQIAGVCISDNPANRPTMLQVHKFLKGMKGE 1268
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449527203|ref|XP_004170602.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1417 bits (3669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 710/959 (74%), Positives = 822/959 (85%)
Query: 1 MLSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
MLSFN LSG LP ELS+L +LTF+AE+NQLSG LPSW G W+ ++S+LLSSN+F G+IPP
Sbjct: 340 MLSFNYLSGVLPPELSELSMLTFSAERNQLSGPLPSWFGKWDHVDSILLSSNRFTGEIPP 399
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
EIGNCS L +SLSNN L+G IP+E+C + SL EIDLD N L+GTI+ F C NL+QLV
Sbjct: 400 EIGNCSKLNHLSLSNNLLTGPIPKEICNAASLMEIDLDSNFLSGTIDDTFVTCKNLTQLV 459
Query: 121 IFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180
+ N I G+IPEY S LPL+V++LD+NNFTG +P SIWNS LMEFSAANN LEG LP +
Sbjct: 460 LVDNQIVGAIPEYFSDLPLLVINLDANNFTGYLPTSIWNSVDLMEFSAANNQLEGHLPPD 519
Query: 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDL 240
+G AA+LERLVL+NN L G +P EIGNL+ALSVL+LNSNL +G IP LGDC +LTTLDL
Sbjct: 520 IGYAASLERLVLSNNRLTGIIPDEIGNLTALSVLNLNSNLLEGTIPAMLGDCSALTTLDL 579
Query: 241 GNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDL 300
GNN+L+G IPEK+ADL++LQCLVLSHNNLSG IPSKPS+YFRQ +PDLSF+QHHGVFDL
Sbjct: 580 GNNSLNGSIPEKLADLSELQCLVLSHNNLSGAIPSKPSAYFRQLTIPDLSFVQHHGVFDL 639
Query: 301 SYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSE 360
S+NRLSG IP+ELG+CVVVVDLLLNNN+LSG IP SLS+LTNLTTLDLS N LTGPIP+E
Sbjct: 640 SHNRLSGTIPDELGNCVVVVDLLLNNNLLSGAIPSSLSQLTNLTTLDLSSNTLTGPIPAE 699
Query: 361 FGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDL 420
G ++KLQGLYLGNN+L G IP S L LVKLNLTGN+LSG VP +FG LK LTHLDL
Sbjct: 700 IGKALKLQGLYLGNNRLMGMIPESFSHLNSLVKLNLTGNRLSGSVPKTFGGLKALTHLDL 759
Query: 421 SFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLP 480
S NELDG LPSSLS++LNLVGLY+Q N+LSG V ELF +S +WKI T+N+S+N +G LP
Sbjct: 760 SCNELDGDLPSSLSSMLNLVGLYVQENRLSGQVVELFPSSMSWKIETLNLSDNYLEGVLP 819
Query: 481 RSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYL 540
R+LGNLSYLT LDLH NKF G IP DLG+LMQLEYLDVS N L G+IPE +CSL N+ YL
Sbjct: 820 RTLGNLSYLTTLDLHGNKFAGTIPSDLGDLMQLEYLDVSNNSLSGEIPEKICSLVNMFYL 879
Query: 541 SLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTFGKLALLHAFGLAGLV 600
+LAEN LEG +PRSGICQNLSK SL GNKDLCG+I+G NC++K+ + A+L+++ +AG++
Sbjct: 880 NLAENSLEGPIPRSGICQNLSKSSLVGNKDLCGRILGFNCRIKSLERSAVLNSWSVAGII 939
Query: 601 VGCVFIVLTTVIALRKQIKRRSRCSDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSINIA 660
+ V IVLT A+R++I R SDPEE+EE+KLNSF D NLYFLSSSRSKEPLSIN+A
Sbjct: 940 IVSVLIVLTVAFAMRRRIIGIQRDSDPEEMEESKLNSFIDPNLYFLSSSRSKEPLSINVA 999
Query: 661 MFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHR 720
MFEQPL++LTLV ILEATNNFCKTNIIGDGGFGTVYKA LPDGK VAVKKLS+AKTQGHR
Sbjct: 1000 MFEQPLLKLTLVDILEATNNFCKTNIIGDGGFGTVYKATLPDGKVVAVKKLSEAKTQGHR 1059
Query: 721 EFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDK 780
EF AEMET+GKVKH NLVPLLGYCS EEKLLVYEYMVNGSLDLWLRNRTG+LE+L W+
Sbjct: 1060 EFIAEMETIGKVKHHNLVPLLGYCSLGEEKLLVYEYMVNGSLDLWLRNRTGTLEILNWET 1119
Query: 781 RYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS 840
R+K+A GAARGLAFLHHGF PHIIHRD+KASNILLN++FE KVADFGLARLISACETHV+
Sbjct: 1120 RFKVASGAARGLAFLHHGFIPHIIHRDVKASNILLNQDFEPKVADFGLARLISACETHVT 1179
Query: 841 TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900
T+IAGTFGYIPPEYGQSGRSTT+GDVYSFGVILLELVTGKEPTGP+FK+IEGGNLVGWVF
Sbjct: 1180 TEIAGTFGYIPPEYGQSGRSTTKGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVF 1239
Query: 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
QK+ KGQAADVLD TVL ADSK MML+ L+IA CLS+NPA RP+ML VLKFLK IK E
Sbjct: 1240 QKINKGQAADVLDATVLNADSKHMMLQTLQIACVCLSENPANRPSMLQVLKFLKGIKDE 1298
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449446181|ref|XP_004140850.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1417 bits (3669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 711/959 (74%), Positives = 821/959 (85%)
Query: 1 MLSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
MLSFN LSG LP ELS+L +LTF+AE+NQLSG LPSW G W+ ++S+LLSSN+F G IPP
Sbjct: 340 MLSFNYLSGVLPPELSELSMLTFSAERNQLSGPLPSWFGKWDHVDSILLSSNRFTGGIPP 399
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
EIGNCS L +SLSNN L+G IP+E+C + SL EIDLD N L+GTI+ F C NL+QLV
Sbjct: 400 EIGNCSKLNHLSLSNNLLTGPIPKEICNAASLMEIDLDSNFLSGTIDDTFVTCKNLTQLV 459
Query: 121 IFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180
+ N I G+IPEY S LPL+V++LD+NNFTG +P SIWNS LMEFSAANN LEG LP E
Sbjct: 460 LVDNQIVGAIPEYFSDLPLLVINLDANNFTGYLPTSIWNSVDLMEFSAANNQLEGHLPPE 519
Query: 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDL 240
+G AA+LERLVL+NN L G +P EIGNL+ALSVL+LNSNL +G IP LGDC +LTTLDL
Sbjct: 520 IGYAASLERLVLSNNRLTGIIPDEIGNLTALSVLNLNSNLLEGTIPAMLGDCSALTTLDL 579
Query: 241 GNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDL 300
GNN+L+G IPEK+ADL++LQCLVLSHNNLSG IPSKPS+YFRQ +PDLSF+QHHGVFDL
Sbjct: 580 GNNSLNGSIPEKLADLSELQCLVLSHNNLSGAIPSKPSAYFRQLTIPDLSFVQHHGVFDL 639
Query: 301 SYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSE 360
S+NRLSG IP+ELG+CVVVVDLLLNNN+LSG IP SLS+LTNLTTLDLS N LTGPIP+E
Sbjct: 640 SHNRLSGTIPDELGNCVVVVDLLLNNNLLSGAIPSSLSQLTNLTTLDLSSNTLTGPIPAE 699
Query: 361 FGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDL 420
G ++KLQGLYLGNN+L G IP S L LVKLNLTGN+LSG VP +FG LK LTHLDL
Sbjct: 700 IGKALKLQGLYLGNNRLMGMIPESFSHLNSLVKLNLTGNRLSGSVPKTFGGLKALTHLDL 759
Query: 421 SFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLP 480
S NELDG LPSSLS++LNLVGLY+Q N+LSG V ELF +S +WKI T+N+S+N +G LP
Sbjct: 760 SCNELDGDLPSSLSSMLNLVGLYVQENRLSGQVVELFPSSMSWKIETLNLSDNYLEGVLP 819
Query: 481 RSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYL 540
R+LGNLSYLT LDLH NKF G IP DLG+LMQLEYLDVS N L G+IPE +CSL N+ YL
Sbjct: 820 RTLGNLSYLTTLDLHGNKFAGTIPSDLGDLMQLEYLDVSNNSLSGEIPEKICSLVNMFYL 879
Query: 541 SLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTFGKLALLHAFGLAGLV 600
+LAEN LEG +PRSGICQNLSK SL GNKDLCG+I+G NC++K+ + A+L+++ +AG++
Sbjct: 880 NLAENSLEGPIPRSGICQNLSKSSLVGNKDLCGRILGFNCRIKSLERSAVLNSWSVAGII 939
Query: 601 VGCVFIVLTTVIALRKQIKRRSRCSDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSINIA 660
+ V IVLT A+R++I R SDPEE+EE+KLNSF D NLYFLSSSRSKEPLSIN+A
Sbjct: 940 IVSVLIVLTVAFAMRRRIIGIQRDSDPEEMEESKLNSFIDPNLYFLSSSRSKEPLSINVA 999
Query: 661 MFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHR 720
MFEQPL++LTLV ILEATNNFCKTNIIGDGGFGTVYKA LPDGK VAVKKLS+AKTQGHR
Sbjct: 1000 MFEQPLLKLTLVDILEATNNFCKTNIIGDGGFGTVYKATLPDGKVVAVKKLSEAKTQGHR 1059
Query: 721 EFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDK 780
EF AEMET+GKVKH NLVPLLGYCS EEKLLVYEYMVNGSLDLWLRNRTG+LE+L W+
Sbjct: 1060 EFIAEMETIGKVKHHNLVPLLGYCSLGEEKLLVYEYMVNGSLDLWLRNRTGTLEILNWET 1119
Query: 781 RYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS 840
R+K+A GAARGLAFLHHGF PHIIHRD+KASNILLN++FE KVADFGLARLISACETHV+
Sbjct: 1120 RFKVASGAARGLAFLHHGFIPHIIHRDVKASNILLNQDFEPKVADFGLARLISACETHVT 1179
Query: 841 TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900
T+IAGTFGYIPPEYGQSGRSTT+GDVYSFGVILLELVTGKEPTGP+FK+IEGGNLVGWVF
Sbjct: 1180 TEIAGTFGYIPPEYGQSGRSTTKGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVF 1239
Query: 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
QK+ KGQAADVLD TVL ADSK MML+ L+IA CLS+NPA RP+ML VLKFLK IK E
Sbjct: 1240 QKINKGQAADVLDATVLNADSKHMMLQTLQIACVCLSENPANRPSMLQVLKFLKGIKDE 1298
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356534151|ref|XP_003535621.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1394 bits (3609), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 703/959 (73%), Positives = 812/959 (84%), Gaps = 2/959 (0%)
Query: 1 MLSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
MLSFN+LSGSLPEELSDLP+L F+AEKNQL G LPSWLG WN ++SLLLS+N+F G IPP
Sbjct: 313 MLSFNSLSGSLPEELSDLPMLAFSAEKNQLHGPLPSWLGKWNNVDSLLLSANRFSGVIPP 372
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
E+GNCS L+ +SLS+N L+G IP ELC + SL E+DLD N L+GTIE VF KC NL+QLV
Sbjct: 373 ELGNCSALEHLSLSSNLLTGPIPEELCNAASLLEVDLDDNFLSGTIEEVFVKCKNLTQLV 432
Query: 121 IFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180
+ N I GSIPEYLS+LPLMVLDLDSNNF+G IP +WNS TLMEFSAANN LEGSLP E
Sbjct: 433 LMNNRIVGSIPEYLSELPLMVLDLDSNNFSGKIPSGLWNSSTLMEFSAANNRLEGSLPVE 492
Query: 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDL 240
+G+A LERLVL+NN L G +PKEIG+L++LSVL+LN N+ +G IP ELGDC SLTTLDL
Sbjct: 493 IGSAVMLERLVLSNNRLTGTIPKEIGSLTSLSVLNLNGNMLEGSIPTELGDCTSLTTLDL 552
Query: 241 GNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDL 300
GNN L+G IPEK+ +L+QLQCLV SHNNLSG IP+K SSYFRQ ++PDLSF+QH GVFDL
Sbjct: 553 GNNQLNGSIPEKLVELSQLQCLVFSHNNLSGSIPAKKSSYFRQLSIPDLSFVQHLGVFDL 612
Query: 301 SYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSE 360
S+NRLSGPIP+ELGSCVVVVDLL++NNMLSG IP SLS LTNLTTLDLS N L+G IP E
Sbjct: 613 SHNRLSGPIPDELGSCVVVVDLLVSNNMLSGSIPRSLSLLTNLTTLDLSGNLLSGSIPQE 672
Query: 361 FGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDL 420
FG +KLQGLYLG NQL+G+IP S G L LVKLNLTGNKLSG +P SF N+K LTHLDL
Sbjct: 673 FGGVLKLQGLYLGQNQLSGTIPESFGKLSSLVKLNLTGNKLSGPIPVSFQNMKGLTHLDL 732
Query: 421 SFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLP 480
S NEL G+LPSSLS + +LVG+Y+Q+N+LSG + LFSNS W+I +N+SNN F G LP
Sbjct: 733 SSNELSGELPSSLSGVQSLVGIYVQNNRLSGQIGNLFSNSMTWRIEIVNLSNNCFKGNLP 792
Query: 481 RSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYL 540
+SL NLSYLTNLDLH N TGEIP DLG+LMQLEY DVS N+L G+IP+ +CSL NL +L
Sbjct: 793 QSLANLSYLTNLDLHGNMLTGEIPLDLGDLMQLEYFDVSGNQLSGRIPDKLCSLVNLNHL 852
Query: 541 SLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTFGKLALLHAFGLAGLV 600
L++NRLEG +PR+GICQNLS++ L GNK+LCG+++G + Q K+ G+ L +A+ LA +
Sbjct: 853 DLSQNRLEGPIPRNGICQNLSRVRLAGNKNLCGQMLGIDSQDKSIGRSILYNAWRLAVIA 912
Query: 601 VGCVFIVLTTVIALRKQIKRRSRCSDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSINIA 660
V + + L+ L K I RR +DPEE++E KLNS+ DHNLYFLSSSRSKEPLSIN+A
Sbjct: 913 VTIILLSLSVAFLLHKWISRRQ--NDPEELKERKLNSYVDHNLYFLSSSRSKEPLSINVA 970
Query: 661 MFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHR 720
MFEQPL++LTLV ILEAT+NF K NIIGDGGFGTVYKA LP+GKTVAVKKLS+AKTQGHR
Sbjct: 971 MFEQPLLKLTLVDILEATDNFSKANIIGDGGFGTVYKATLPNGKTVAVKKLSEAKTQGHR 1030
Query: 721 EFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDK 780
EF AEMETLGKVKH NLV LLGYCS EEKLLVYEYMVNGSLDLWLRNRTG+LE+L W+K
Sbjct: 1031 EFMAEMETLGKVKHHNLVALLGYCSIGEEKLLVYEYMVNGSLDLWLRNRTGALEILDWNK 1090
Query: 781 RYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS 840
RYKIA GAARGLAFLHHGF PHIIHRD+KASNILLNE+FE KVADFGLARLISACETH++
Sbjct: 1091 RYKIATGAARGLAFLHHGFIPHIIHRDVKASNILLNEDFEPKVADFGLARLISACETHIT 1150
Query: 841 TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900
TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGP+FK+IEGGNLVGW
Sbjct: 1151 TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWAC 1210
Query: 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
QK+KKGQA DVLDPTVL ADSK MML+ML+IA C+SDNPA RPTML V KFLK +K E
Sbjct: 1211 QKIKKGQAVDVLDPTVLDADSKQMMLQMLQIACVCISDNPANRPTMLQVHKFLKGMKGE 1269
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224120068|ref|XP_002318234.1| predicted protein [Populus trichocarpa] gi|222858907|gb|EEE96454.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1360 bits (3519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 694/959 (72%), Positives = 782/959 (81%), Gaps = 42/959 (4%)
Query: 1 MLSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
MLSFN+LSG LPEELS LP+LTF+A+KNQLSG LP+WLG WNQ+ESLLLS+N+F GKIP
Sbjct: 321 MLSFNSLSGVLPEELSMLPMLTFSADKNQLSGPLPAWLGKWNQVESLLLSNNRFTGKIPA 380
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
E+GNC+ L+ ISLS+N LSG IPRELC L EIDLDGN L G IE VF KC+NLSQLV
Sbjct: 381 EVGNCTALRVISLSSNMLSGEIPRELCNPVELMEIDLDGNFLAGDIEDVFLKCTNLSQLV 440
Query: 121 IFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180
+ N I GSIPEYL++LPLMVLDLDSNNF+G IP+S+WNS LMEFSAANN LEGSLP E
Sbjct: 441 LMNNQINGSIPEYLAELPLMVLDLDSNNFSGTIPLSLWNSLNLMEFSAANNFLEGSLPAE 500
Query: 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDL 240
+GNA LERLVL+NN L G +PKEIGNL+ALSVL+LNSNLF+G IP ELG ++LTTLDL
Sbjct: 501 IGNAVQLERLVLSNNQLGGTIPKEIGNLTALSVLNLNSNLFEGNIPVELGHSVALTTLDL 560
Query: 241 GNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDL 300
GNN L G IPEK+ADL QL CLVLSHN LSG IPSKPS YFR+A++PD SF QH GVFDL
Sbjct: 561 GNNQLCGSIPEKLADLVQLHCLVLSHNKLSGSIPSKPSLYFREASIPDSSFFQHLGVFDL 620
Query: 301 SYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSE 360
S+N LSG IPEE+G+ + VVDLLLNNN L+G++PGSLSRLTNLTTLDLS N LTG IP E
Sbjct: 621 SHNMLSGSIPEEMGNLMFVVDLLLNNNKLAGEMPGSLSRLTNLTTLDLSGNMLTGSIPPE 680
Query: 361 FGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDL 420
DS KLQGLYLGNNQLTG+IP LG L LVKLNLTGN+L G VP S G+LK LTHLDL
Sbjct: 681 LVDSSKLQGLYLGNNQLTGTIPGRLGVLCSLVKLNLTGNQLHGPVPRSLGDLKALTHLDL 740
Query: 421 SFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLP 480
S+NELDG+LPSS+S +LNLVGLY+Q N+LSGP+DEL S + +P
Sbjct: 741 SYNELDGELPSSVSQMLNLVGLYVQQNRLSGPLDELLSRT------------------VP 782
Query: 481 RSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYL 540
LGNL L D+ N+ +G+IP ++ L+ L YL+
Sbjct: 783 VELGNLMQLEYFDVSGNRLSGKIPENICVLVNLFYLN----------------------- 819
Query: 541 SLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTFGKLALLHAFGLAGLV 600
LAEN LEG VPRSGIC NLSKISL GNKDLCG+I+G +C++K+F K L+A+GLAG+
Sbjct: 820 -LAENSLEGPVPRSGICLNLSKISLAGNKDLCGRILGLDCRIKSFNKSYFLNAWGLAGIA 878
Query: 601 VGCVFIVLTTVIALRKQIKRRSRCSDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSINIA 660
VGC+ + L+T ALRK I R S DPEEIEE KLNSF D NLYFLSSSRSKEPLSINIA
Sbjct: 879 VGCMIVALSTAFALRKWIMRDSGQGDPEEIEERKLNSFIDKNLYFLSSSRSKEPLSINIA 938
Query: 661 MFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHR 720
MFEQPL+++TLV ILEATNNFCKTNIIGDGGFGTVYKA L DGKTVAVKKLSQAKTQG R
Sbjct: 939 MFEQPLLKITLVDILEATNNFCKTNIIGDGGFGTVYKATLRDGKTVAVKKLSQAKTQGDR 998
Query: 721 EFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDK 780
EF AEMETLGKVKHQNLV LLGYCS EEKLLVYEYMVNGSLDLWLRNR+G+L+VL W K
Sbjct: 999 EFIAEMETLGKVKHQNLVALLGYCSLGEEKLLVYEYMVNGSLDLWLRNRSGALDVLDWPK 1058
Query: 781 RYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS 840
R+KIA GAA GLAFLHHGFTPHIIHRDIKASNILLNE FE +VADFGLARLISACETHVS
Sbjct: 1059 RFKIATGAACGLAFLHHGFTPHIIHRDIKASNILLNENFEPRVADFGLARLISACETHVS 1118
Query: 841 TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900
TDIAGTFGYIPPEYGQSGRST+RGDVYSFGVILLELVTGKEPTGP+FK++EGGNLVGWV
Sbjct: 1119 TDIAGTFGYIPPEYGQSGRSTSRGDVYSFGVILLELVTGKEPTGPDFKEVEGGNLVGWVS 1178
Query: 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
QK+KKGQ ADVLDPTVL+ADSKPMML++L+IA CLSDNPA RPTML VLKFLK I+ E
Sbjct: 1179 QKIKKGQTADVLDPTVLSADSKPMMLQVLQIAAVCLSDNPANRPTMLKVLKFLKGIRDE 1237
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224136952|ref|XP_002322457.1| predicted protein [Populus trichocarpa] gi|222869453|gb|EEF06584.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1323 bits (3425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 695/961 (72%), Positives = 770/961 (80%), Gaps = 68/961 (7%)
Query: 1 MLSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
MLSFN+LSG LPEELS LP+LTF+A+KNQLSG LP WLG WNQ+ESLLLS+N+F GKIPP
Sbjct: 321 MLSFNSLSGVLPEELSMLPMLTFSADKNQLSGPLPHWLGKWNQVESLLLSNNRFSGKIPP 380
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
EIGNCS L+ ISLS+N LSG IPRELC + L EIDLD N LTG IE VF KC+NLSQLV
Sbjct: 381 EIGNCSALRVISLSSNLLSGEIPRELCKAVDLMEIDLDVNFLTGGIEDVFLKCTNLSQLV 440
Query: 121 IFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180
+ N I GSIPEYL+ LPL VLDLDSNNFTG IPVS+WNS TLMEFSAANNLLEGSLP E
Sbjct: 441 LMDNQIDGSIPEYLAGLPLTVLDLDSNNFTGTIPVSLWNSMTLMEFSAANNLLEGSLPVE 500
Query: 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDL 240
+GNA LERLVL+NN L G +PKEIGNL+ALSVL+LNSNL +G IP ELG +LTTLDL
Sbjct: 501 IGNAVQLERLVLSNNQLGGTIPKEIGNLTALSVLNLNSNLLEGTIPVELGHSAALTTLDL 560
Query: 241 GNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDL 300
GNN LSG IPEK+ADL QL CLVLSHN LSGPIPS+PS YFR+A++PD SF QH GVFDL
Sbjct: 561 GNNQLSGSIPEKLADLVQLHCLVLSHNKLSGPIPSEPSLYFREASIPDSSFFQHLGVFDL 620
Query: 301 SYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSE 360
S+N LSG IPEE+G+ +VVVDLLLNNN LSG+IPGSLSRLTNLTTLDLS N LTG IP E
Sbjct: 621 SHNMLSGSIPEEMGNLMVVVDLLLNNNKLSGEIPGSLSRLTNLTTLDLSGNMLTGSIPPE 680
Query: 361 FGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDL 420
GDS KLQGLYLGNNQL+G+IP LG LG LVKLNLTGN+L G VP SFG+LKELTHLDL
Sbjct: 681 LGDSSKLQGLYLGNNQLSGTIPGRLGVLGSLVKLNLTGNQLYGPVPRSFGDLKELTHLDL 740
Query: 421 SFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLP 480
S+NELDG+LPSSLS +LNLVGLY
Sbjct: 741 SYNELDGELPSSLSGMLNLVGLY------------------------------------- 763
Query: 481 RSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYL 540
LGNL L D+ N+ +G+IP L L+ L YL+
Sbjct: 764 --LGNLVQLAYFDVSGNRISGQIPEKLCALVNLFYLN----------------------- 798
Query: 541 SLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTFGKLALLHAFGLAGLV 600
LAEN LEG VP SGIC NLSKISL GNKDLCGKI+G +C++K+F K L+A+GLAG+
Sbjct: 799 -LAENSLEGPVPGSGICLNLSKISLAGNKDLCGKIMGLDCRIKSFDKSYYLNAWGLAGIA 857
Query: 601 VGCVFIVLTTVIALRKQIKRRSRCSDPEEIEETKLNSFSDHNLYFL--SSSRSKEPLSIN 658
VGC+ + L+ ALRK I + S D ++E KLNSF D NLYFL SSSRSKEPLSIN
Sbjct: 858 VGCMIVTLSIAFALRKWILKDSGQGD---LDERKLNSFLDQNLYFLSSSSSRSKEPLSIN 914
Query: 659 IAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQG 718
IAMFEQPL+++TLV ILEATNNFCKTNIIGDGGFGTVYKA LPD KTVAVKKLSQAKTQG
Sbjct: 915 IAMFEQPLLKITLVDILEATNNFCKTNIIGDGGFGTVYKATLPDVKTVAVKKLSQAKTQG 974
Query: 719 HREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGW 778
+REF AEMETLGKVKHQNLVPLLGYCSF EEKLLVYEYMVNGSLDLWLRN++ +L+VL W
Sbjct: 975 NREFIAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNQSRALDVLDW 1034
Query: 779 DKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838
KR KIA GAARGLAFLHHGFTPHIIHRDIKASNILLNE+FE KVADFGLARLISACETH
Sbjct: 1035 PKRVKIATGAARGLAFLHHGFTPHIIHRDIKASNILLNEDFEPKVADFGLARLISACETH 1094
Query: 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGW 898
VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGP+FK++EGGNLVGW
Sbjct: 1095 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPDFKEVEGGNLVGW 1154
Query: 899 VFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958
VFQK+KKGQAADVLDPTVL+ADSK MML++L+IA CLSDNPA RPTML VLKFLK IK
Sbjct: 1155 VFQKIKKGQAADVLDPTVLSADSKQMMLQVLQIAAICLSDNPANRPTMLKVLKFLKGIKD 1214
Query: 959 E 959
E
Sbjct: 1215 E 1215
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297806755|ref|XP_002871261.1| extra sporogenous cells [Arabidopsis lyrata subsp. lyrata] gi|297317098|gb|EFH47520.1| extra sporogenous cells [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1208 bits (3126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/958 (64%), Positives = 736/958 (76%), Gaps = 55/958 (5%)
Query: 1 MLSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
MLSFN+LSGSLP ELS++P+LTF+AE+NQLSGSLPSW+G W ++SLLL++N+F G+IP
Sbjct: 276 MLSFNSLSGSLPLELSEIPLLTFSAERNQLSGSLPSWIGKWKVLDSLLLANNRFSGEIPR 335
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
EI +C MLK +SL++N L+GSIPRELC S SLEEIDL GNLL+GTIE VF CS+L +LV
Sbjct: 336 EIEDCPMLKHLSLASNLLTGSIPRELCGSGSLEEIDLSGNLLSGTIEEVFNGCSSLVELV 395
Query: 121 IFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180
+ N I GSIPE LSKLPLM +DLDSNNFTG IP S+W S LMEFSA+ N LEG LP E
Sbjct: 396 LTNNQINGSIPEDLSKLPLMAVDLDSNNFTGEIPKSLWKSTNLMEFSASYNRLEGYLPAE 455
Query: 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDL 240
+GNAA+L RLVL++N LKG +P+EIG L++LSVL+LNSN G IP ELGDC LTTLDL
Sbjct: 456 IGNAASLTRLVLSDNQLKGEIPREIGKLTSLSVLNLNSNKLQGKIPKELGDCTCLTTLDL 515
Query: 241 GNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDL 300
GNNNL G IP++I L+QLQCLVLS+NNLSG IPSKPS+YF Q +MPDLSF+QHHG+FDL
Sbjct: 516 GNNNLQGQIPDRITGLSQLQCLVLSYNNLSGSIPSKPSAYFHQIDMPDLSFLQHHGIFDL 575
Query: 301 SYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSE 360
SYNRLSG IPEELG+CVV+V++LL+NN LSG+IP SLSRLTNLT LDLS N LTG IP E
Sbjct: 576 SYNRLSGSIPEELGNCVVLVEILLSNNHLSGEIPASLSRLTNLTILDLSGNALTGSIPKE 635
Query: 361 FGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDL 420
G S+KLQGL L NNQL G IP S G L LVKLNLT NKL G VP S GNLKELTH+DL
Sbjct: 636 MGHSLKLQGLNLANNQLNGYIPESFGLLDSLVKLNLTKNKLDGSVPASLGNLKELTHMDL 695
Query: 421 SFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLP 480
SFN L G+L S LS ++ LVGLY++ NK F G +P
Sbjct: 696 SFNNLSGELSSELSTMVKLVGLYIEQNK--------------------------FTGEIP 729
Query: 481 RSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYL 540
LGNL+ L LD+ EN +GEIP + L LE+L+
Sbjct: 730 SELGNLTQLEYLDVSENLLSGEIPTKICGLPNLEFLN----------------------- 766
Query: 541 SLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTFGKLALLHAFGLAGLV 600
LA+N L G VP G+CQ+ SK L+GNK+LCG++IGS+C++ L HA+G+AGL+
Sbjct: 767 -LAKNNLRGEVPSDGVCQDPSKALLSGNKELCGRVIGSDCKID---GTKLTHAWGIAGLM 822
Query: 601 VGCVFIVLTTVIALRKQI--KRRSRCSDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSIN 658
+G IV V +LR+ + KR + DPE +EE++L F D NLYFLS SRS+EPLSIN
Sbjct: 823 LGFTIIVFVFVFSLRRWVITKRVKQRDDPERMEESRLKGFVDQNLYFLSGSRSREPLSIN 882
Query: 659 IAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQG 718
IAMFEQPL+++ L I+EAT++F K NIIGDGGFGTVYKA LP GKTVAVKKLS+AKTQG
Sbjct: 883 IAMFEQPLLKVRLGDIVEATDHFSKKNIIGDGGFGTVYKACLPGGKTVAVKKLSEAKTQG 942
Query: 719 HREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGW 778
+REF AEMETLGKVKH NLV LLGYCSF +EKLLVYEYMVNGSLD WLRN+TG LEVL W
Sbjct: 943 NREFMAEMETLGKVKHPNLVSLLGYCSFSDEKLLVYEYMVNGSLDHWLRNQTGMLEVLDW 1002
Query: 779 DKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838
KR KIA GAARGLAFLHHGF PHIIHRDIKASNILL+ +FE KVADFGLARLISACE+H
Sbjct: 1003 SKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESH 1062
Query: 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGW 898
VST IAGTFGYIPPEYGQS R+TT+GDVYSFGVILLELVTGKEPTGP+FK+ EGGNLVGW
Sbjct: 1063 VSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGGNLVGW 1122
Query: 899 VFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
V QK+ +G+A DVLDP +++ K +L++L+IA CL++ PA RP ML VLK LK+I
Sbjct: 1123 VTQKINQGKAVDVLDPLLVSVALKNSLLRLLQIAMVCLAETPANRPNMLDVLKALKDI 1180
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302788101|ref|XP_002975820.1| hypothetical protein SELMODRAFT_103725 [Selaginella moellendorffii] gi|300156821|gb|EFJ23449.1| hypothetical protein SELMODRAFT_103725 [Selaginella moellendorffii] | Back alignment and taxonomy information |
|---|
Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/960 (55%), Positives = 683/960 (71%), Gaps = 37/960 (3%)
Query: 2 LSFNALSGSLPEELSDLP-ILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
L+FN LSG LPEEL++L +++F E N LSG +PSW+G W +++S+LLS+N F G +PP
Sbjct: 390 LAFNLLSGRLPEELANLERLVSFTVEGNMLSGPIPSWIGRWKRVDSILLSTNSFTGSLPP 449
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
E+GNCS L+ + + N LSG IP+ELC + +L ++ L+ N+ +G+I G F KC+NL+QL
Sbjct: 450 ELGNCSSLRDLGVDTNLLSGEIPKELCDARALSQLTLNRNMFSGSIVGTFSKCTNLTQLD 509
Query: 121 IFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180
+ N++ G +P L LPLM+LDL NNFTG +P +W S LME A+NN EG L
Sbjct: 510 LTSNNLSGPLPTDLLALPLMILDLSGNNFTGTLPDELWQSPILMEIYASNNNFEGQLSPL 569
Query: 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDL 240
VGN +L+ L+L NN L G LP+E+G LS L+VL L N G IP ELG C LTTL+L
Sbjct: 570 VGNLHSLQHLILDNNFLNGSLPRELGKLSNLTVLSLLHNRLSGSIPAELGHCERLTTLNL 629
Query: 241 GNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDL 300
G+N+L+G IP+++ L L LVLSHN L+G IP + S F+Q +PD SFIQHHG+ DL
Sbjct: 630 GSNSLTGSIPKEVGRLVLLDYLVLSHNKLTGTIPPEMCSDFQQIAIPDSSFIQHHGILDL 689
Query: 301 SYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSE 360
S+N L+G IP ++G C V+V++ L N LSG IP +++LTNLTTLDLS NQL+G IP +
Sbjct: 690 SWNELTGTIPPQIGDCAVLVEVHLRGNRLSGSIPKEIAKLTNLTTLDLSENQLSGTIPPQ 749
Query: 361 FGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDL 420
GD K+QGL NN LTGSIP G LG LV+LN+TGN LSG +P + GNL L+HLD+
Sbjct: 750 LGDCQKIQGLNFANNHLTGSIPSEFGQLGRLVELNVTGNALSGTLPDTIGNLTFLSHLDV 809
Query: 421 SFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLP 480
S N L G+LP S++ +L LV +++S+NLF G +P
Sbjct: 810 SNNNLSGELPDSMARLLFLV---------------------------LDLSHNLFRGAIP 842
Query: 481 RSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYL 540
S+GNLS L+ L L N F+G IP +L NLMQL Y DVS N L G+IP+ +C SNL +L
Sbjct: 843 SSIGNLSGLSYLSLKGNGFSGAIPTELANLMQLSYADVSDNELTGKIPDKLCEFSNLSFL 902
Query: 541 SLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTFGKLALLHAFGLAGLV 600
+++ NRL G VP C N + + NK LCG I S C + L A L G+V
Sbjct: 903 NMSNNRLVGPVPER--CSNFTPQAFLSNKALCGSIFRSECPSGKH-ETNSLSASALLGIV 959
Query: 601 VGCVFIVLTTVIALRKQIKRRSRCSDP--EEIEETKLNSFSDHNLYFLSSSRSKEPLSIN 658
+G V + V AL ++ R+ +P + +E KL++ S + LS S+ KEPLSIN
Sbjct: 960 IGSVVAFFSFVFAL---MRCRTVKHEPFMKMSDEGKLSNGSSIDPSMLSVSKMKEPLSIN 1016
Query: 659 IAMFEQPL-MRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQ 717
+AMFE+PL +RLTL IL+AT +FCK NIIGDGGFGTVYKA LPDG++VAVKKL QA+ Q
Sbjct: 1017 VAMFERPLPLRLTLADILQATGSFCKANIIGDGGFGTVYKAVLPDGRSVAVKKLGQARNQ 1076
Query: 718 GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLG 777
G+REF AEMETLGKVKH+NLVPLLGYCSF EEKLLVY+YMVNGSLDLWLRNR +LEVL
Sbjct: 1077 GNREFLAEMETLGKVKHRNLVPLLGYCSFGEEKLLVYDYMVNGSLDLWLRNRADALEVLD 1136
Query: 778 WDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837
W KR+KIA G+ARGLAFLHHG PHIIHRD+KASNILL+ EFE ++ADFGLARLISA ET
Sbjct: 1137 WPKRFKIATGSARGLAFLHHGLVPHIIHRDMKASNILLDAEFEPRIADFGLARLISAYET 1196
Query: 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVG 897
HVSTDIAGTFGYIPPEYGQS RSTTRGDVYS+GVILLE+++GKEPTG EFKD+EGGNL+G
Sbjct: 1197 HVSTDIAGTFGYIPPEYGQSWRSTTRGDVYSYGVILLEILSGKEPTGIEFKDVEGGNLIG 1256
Query: 898 WVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957
WV Q +K GQAA+VLDP + K ML++L++A C +++PA RP+ML V ++LK+I+
Sbjct: 1257 WVRQMIKLGQAAEVLDPDISNGPWKVEMLQVLQVASLCTAEDPAKRPSMLQVARYLKDIE 1316
|
Source: Selaginella moellendorffii Species: Selaginella moellendorffii Genus: Selaginella Family: Selaginellaceae Order: Selaginellales Class: Isoetopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 959 | ||||||
| TAIR|locus:2182870 | 1192 | EMS1 "EXCESS MICROSPOROCYTES1" | 0.973 | 0.783 | 0.490 | 1.8e-222 | |
| UNIPROTKB|Q8RZV7 | 1294 | P0413C03.22 "Putative extra sp | 0.958 | 0.710 | 0.400 | 3.8e-165 | |
| TAIR|locus:2160791 | 1102 | AT5G63930 [Arabidopsis thalian | 0.588 | 0.511 | 0.361 | 1.5e-149 | |
| TAIR|locus:2020457 | 1166 | BRL1 "BRI1 like" [Arabidopsis | 0.972 | 0.800 | 0.378 | 4.5e-146 | |
| TAIR|locus:2092810 | 1164 | BRL3 "BRI1-like 3" [Arabidopsi | 0.968 | 0.798 | 0.376 | 4.5e-146 | |
| TAIR|locus:2041150 | 1143 | BRL2 "BRI1-like 2" [Arabidopsi | 0.969 | 0.813 | 0.368 | 8.4e-145 | |
| TAIR|locus:2005498 | 1196 | BRI1 "BRASSINOSTEROID INSENSIT | 0.970 | 0.778 | 0.365 | 4.2e-143 | |
| UNIPROTKB|Q942F3 | 1121 | P0480C01.18-1 "cDNA clone:J033 | 0.890 | 0.761 | 0.383 | 2.9e-142 | |
| TAIR|locus:2046525 | 1124 | AT2G33170 [Arabidopsis thalian | 0.957 | 0.816 | 0.358 | 1.5e-140 | |
| TAIR|locus:2154344 | 1135 | AT5G48940 [Arabidopsis thalian | 0.577 | 0.488 | 0.344 | 2.7e-136 |
| TAIR|locus:2182870 EMS1 "EXCESS MICROSPOROCYTES1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2148 (761.2 bits), Expect = 1.8e-222, P = 1.8e-222
Identities = 477/973 (49%), Positives = 608/973 (62%)
Query: 2 LSFNALSGSLPE---ELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKI 58
LS+N L S+P+ EL +L IL + +L G +P LGN ++SL+LS N G +
Sbjct: 241 LSYNPLKCSIPKSFGELHNLSILNLVSA--ELIGLIPPELGNCKSLKSLMLSFNSLSGPL 298
Query: 59 PPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQ 118
P E+ +L + S N LSGS+P + + L+ + L N +G I E C L
Sbjct: 299 PLELSEIPLL-TFSAERNQLSGSLPSWMGKWKVLDSLLLANNRFSGEIPHEIEDCPMLKH 357
Query: 119 LVIFRNHIYGSIP-EYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSL 177
L + N + GSIP E L +DL N +G I +L E NN + GS+
Sbjct: 358 LSLASNLLSGSIPRELCGSGSLEAIDLSGNLLSGTIEEVFDGCSSLGELLLTNNQINGSI 417
Query: 178 PYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTT 237
P ++ L L L +N G +PK + + L + N +G +P E+G+ SL
Sbjct: 418 PEDLWKLP-LMALDLDSNNFTGEIPKSLWKSTNLMEFTASYNRLEGYLPAEIGNAASLKR 476
Query: 238 LDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGV 297
L L +N L+G IP +I L L L L+ N G IP + D + +
Sbjct: 477 LVLSDNQLTGEIPREIGKLTSLSVLNLNANMFQGKIP---------VELGDCTSLT---T 524
Query: 298 FDLSYNRLSGPIPEELGSCXXXXXXXXXXXXXSGKIPGSLS------RLTNLTTL----- 346
DL N L G IP+++ + SG IP S + +L+ L
Sbjct: 525 LDLGSNNLQGQIPDKITALAQLQCLVLSYNNLSGSIPSKPSAYFHQIEMPDLSFLQHHGI 584
Query: 347 -DLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKV 405
DLS N+L+GPIP E G+ + L + L NN L+G IP SL L L L+L+GN L+G +
Sbjct: 585 FDLSYNRLSGPIPEELGECLVLVEISLSNNHLSGEIPASLSRLTNLTILDLSGNALTGSI 644
Query: 406 PTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKI 465
P GN +L L+L+ N+L+G +P S + +LV L L NKL GPV N ++
Sbjct: 645 PKEMGNSLKLQGLNLANNQLNGHIPESFGLLGSLVKLNLTKNKLDGPVPASLGNLK--EL 702
Query: 466 ATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCG 525
M++S N G L L + L L + +NKFTGEIP +LGNL QLEYLDVS N L G
Sbjct: 703 THMDLSFNNLSGELSSELSTMEKLVGLYIEQNKFTGEIPSELGNLTQLEYLDVSENLLSG 762
Query: 526 QIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTF 585
+IP +C L NL +L+LA+N L G VP G+CQ+ SK L+GNK+LCG+++GS+C+++
Sbjct: 763 EIPTKICGLPNLEFLNLAKNNLRGEVPSDGVCQDPSKALLSGNKELCGRVVGSDCKIE-- 820
Query: 586 XXXXXXXXXXXXXXVVGCVFIVLTTVIALRK--QIKRRSRCSDPEEIEETKLNSFSDHNL 643
++G IV V +LR+ KR + DPE +EE++L F D NL
Sbjct: 821 -GTKLRSAWGIAGLMLGFTIIVFVFVFSLRRWAMTKRVKQRDDPERMEESRLKGFVDQNL 879
Query: 644 YFLSSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDG 703
YFLS SRS+EPLSINIAMFEQPL+++ L I+EAT++F K NIIGDGGFGTVYKA LP
Sbjct: 880 YFLSGSRSREPLSINIAMFEQPLLKVRLGDIVEATDHFSKKNIIGDGGFGTVYKACLPGE 939
Query: 704 KTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLD 763
KTVAVKKLS+AKTQG+REF AEMETLGKVKH NLV LLGYCSF EEKLLVYEYMVNGSLD
Sbjct: 940 KTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLD 999
Query: 764 LWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823
WLRN+TG LEVL W KR KIA GAARGLAFLHHGF PHIIHRDIKASNILL+ +FE KV
Sbjct: 1000 HWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKV 1059
Query: 824 ADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPT 883
ADFGLARLISACE+HVST IAGTFGYIPPEYGQS R+TT+GDVYSFGVILLELVTGKEPT
Sbjct: 1060 ADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPT 1119
Query: 884 GPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMR 943
GP+FK+ EGGNLVGW QK+ +G+A DV+DP +++ K L++L+IA CL++ PA R
Sbjct: 1120 GPDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKR 1179
Query: 944 PTMLHVLKFLKEI 956
P ML VLK LKEI
Sbjct: 1180 PNMLDVLKALKEI 1192
|
|
| UNIPROTKB|Q8RZV7 P0413C03.22 "Putative extra sporogenous cells" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 1607 (570.8 bits), Expect = 3.8e-165, P = 3.8e-165
Identities = 392/978 (40%), Positives = 551/978 (56%)
Query: 1 MLSFNA-LSGSLPEELSDLPILTFA-AEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKI 58
+++ NA LSG++P+EL + LT N L G +P + + S + N+ G++
Sbjct: 334 LIAKNAGLSGNMPKELGNCKKLTVINLSFNALIGPIPEEFADLEAIVSFFVEGNKLSGRV 393
Query: 59 PPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQ 118
P I +SI L N SG +P + + L + NLL+G+I + ++L
Sbjct: 394 PDWIQKWKNARSIRLGQNKFSGPLP--VLPLQHLLSFAAESNLLSGSIPSHICQANSLHS 451
Query: 119 LVIFRNHIYGSIPE-YLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSL 177
L++ N++ G+I E + L L+L N+ G +P + L+ + N G L
Sbjct: 452 LLLHHNNLTGTIDEAFKGCTNLTELNLLDNHIHGEVPGYLAELP-LVTLELSQNKFAGML 510
Query: 178 PYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTT 237
P E+ + L + L+NN + G +P+ IG LS L L +++NL +G IP +GD +LT
Sbjct: 511 PAELWESKTLLEISLSNNEITGPIPESIGKLSVLQRLHIDNNLLEGPIPQSVGDLRNLTN 570
Query: 238 LDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGV 297
L L N LSG+IP + + +L L LS+NNL+G IPS S + D S I
Sbjct: 571 LSLRGNRLSGIIPLALFNCRKLATLDLSYNNLTGNIPSAIS----HLTLLD-SLI----- 620
Query: 298 FDLSYNRLSGPIPEEL--GS----------CXXXXXXXXXXXXXSGKIPGSLSRLTNLTT 345
LS N+LSG IP E+ G +G+IP S+ +
Sbjct: 621 --LSSNQLSGSIPAEICVGFENEAHPDSEFLQHHGLLDLSYNQLTGQIPTSIKNCAMVMV 678
Query: 346 LDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGS-IPWSLGSLGGLVKLNLTGNKLSGK 404
L+L N L G IP E G+ L + L N+ G +PWS G L L L L+ N L G
Sbjct: 679 LNLQGNLLNGTIPVELGELTNLTSINLSFNEFVGPMLPWS-GPLVQLQGLILSNNHLDGS 737
Query: 405 VPTSFGN-LKELTHLDLSFNELDGQLPSSL--SNILNLVGLYLQHNKLSGPVDELFSNSA 461
+P G L ++ LDLS N L G LP SL +N LN L + +N LSG + +
Sbjct: 738 IPAKIGQILPKIAVLDLSSNALTGTLPQSLLCNNYLN--HLDVSNNHLSGHIQFSCPDGK 795
Query: 462 AWKIATM--NMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVS 519
+ + N S+N F G L S+ N + L+ LD+H N TG +P L +L L YLD+S
Sbjct: 796 EYSSTLLFFNSSSNHFSGSLDESISNFTQLSTLDIHNNSLTGRLPSALSDLSSLNYLDLS 855
Query: 520 RNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSN 579
N L G IP +C++ L + + + N ++ +L+ + G +C +
Sbjct: 856 SNNLYGAIPCGICNIFGLSFANFSGNYID--------MYSLADCAAGG---ICSTNGTDH 904
Query: 580 CQVKTFXXXXXXXXXXXXXXVVGCVFIVLTTVIALRKQIKRRSRCSDPEEIEETKLNSFS 639
+ + V+ + +VL V RK ++ R + + + S
Sbjct: 905 KALHPYHRVRRAITICAFTFVI-IIVLVLLAVYLRRKLVRSRPLAFESASKAKATVEPTS 963
Query: 640 DHNLYFLSSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAA 699
L +S+EPLSIN+A FE L+R+T IL+AT NF K +IIGDGGFGTVYKAA
Sbjct: 964 TDELL---GKKSREPLSINLATFEHALLRVTADDILKATENFSKVHIIGDGGFGTVYKAA 1020
Query: 700 LPDGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758
LP+G+ VA+K+L + QG REF AEMET+GKVKH NLVPLLGYC +E+ L+YEYM
Sbjct: 1021 LPEGRRVAIKRLHGGHQFQGDREFLAEMETIGKVKHPNLVPLLGYCVCGDERFLIYEYME 1080
Query: 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE 818
NGSL++WLRNR +LE LGW R KI G+ARGLAFLHHGF PHIIHRD+K+SNILL+E
Sbjct: 1081 NGSLEMWLRNRADALEALGWPDRLKICLGSARGLAFLHHGFVPHIIHRDMKSSNILLDEN 1140
Query: 819 FEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT 878
FE +V+DFGLAR+ISACETHVSTDIAGTFGYIPPEYG + +STT+GDVYSFGV++LEL+T
Sbjct: 1141 FEPRVSDFGLARIISACETHVSTDIAGTFGYIPPEYGLTMKSTTKGDVYSFGVVMLELLT 1200
Query: 879 GKEPTGPEFKDIEGG-NLVGWVFQKMKKGQAADVLDPTV-LTADSKPMMLKMLRIAGDCL 936
G+ PTG E +++GG NLVGWV + +G+ ++ DP + +++ + M ++L IA DC
Sbjct: 1201 GRPPTGQE--EVQGGGNLVGWVRWMIARGKQNELFDPCLPVSSVWREQMARVLAIARDCT 1258
Query: 937 SDNPAMRPTMLHVLKFLK 954
+D P RPTML V+K LK
Sbjct: 1259 ADEPFKRPTMLEVVKGLK 1276
|
|
| TAIR|locus:2160791 AT5G63930 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 872 (312.0 bits), Expect = 1.5e-149, Sum P(2) = 1.5e-149
Identities = 211/584 (36%), Positives = 304/584 (52%)
Query: 5 NALSGSLPEELSDLPILT-FAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIG 63
N +SGSLP E+ +L L+ N +SG LP +GN ++ S N G +P EIG
Sbjct: 155 NRISGSLPVEIGNLLSLSQLVTYSNNISGQLPRSIGNLKRLTSFRAGQNMISGSLPSEIG 214
Query: 64 NCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFR 123
C L + L+ N LSG +P+E+ + L ++ L N +G I C++L L +++
Sbjct: 215 GCESLVMLGLAQNQLSGELPKEIGMLKKLSQVILWENEFSGFIPREISNCTSLETLALYK 274
Query: 124 NHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVG 182
N + G IP+ L L L L L N G IP I N +E + N L G +P E+G
Sbjct: 275 NQLVGPIPKELGDLQSLEFLYLYRNGLNGTIPREIGNLSYAIEIDFSENALTGEIPLELG 334
Query: 183 NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGN 242
N LE L L N L G +P E+ L LS LDL+ N G IP L L L
Sbjct: 335 NIEGLELLYLFENQLTGTIPVELSTLKNLSKLDLSINALTGPIPLGFQYLRGLFMLQLFQ 394
Query: 243 NNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSY 302
N+LSG IP K+ + L L +S N+LSG IPS + +NM + +L
Sbjct: 395 NSLSGTIPPKLGWYSDLWVLDMSDNHLSGRIPSYLCLH---SNMI---------ILNLGT 442
Query: 303 NRLSGPIPEELGSCXXXXXXXXXXXXXSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFG 362
N LSG IP + +C G+ P +L + N+T ++L +N+ G IP E G
Sbjct: 443 NNLSGNIPTGITTCKTLVQLRLARNNLVGRFPSNLCKQVNVTAIELGQNRFRGSIPREVG 502
Query: 363 DSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSF 422
+ LQ L L +N TG +P +G L L LN++ NKL+G+VP+ N K L LD+
Sbjct: 503 NCSALQRLQLADNGFTGELPREIGMLSQLGTLNISSNKLTGEVPSEIFNCKMLQRLDMCC 562
Query: 423 NELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRS 482
N G LPS + ++ L L L +N LSG + N + ++ + M NLF+G +PR
Sbjct: 563 NNFSGTLPSEVGSLYQLELLKLSNNNLSGTIPVALGNLS--RLTELQMGGNLFNGSIPRE 620
Query: 483 LGNLSYLT-NLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLS 541
LG+L+ L L+L NK TGEIPP+L NL+ LE+L ++ N L G+IP + +LS+LL +
Sbjct: 621 LGSLTGLQIALNLSYNKLTGEIPPELSNLVMLEFLLLNNNNLSGEIPSSFANLSSLLGYN 680
Query: 542 LAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTF 585
+ N L G +P + +N+S S GN+ LCG + Q + F
Sbjct: 681 FSYNSLTGPIP---LLRNISMSSFIGNEGLCGPPLNQCIQTQPF 721
|
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| TAIR|locus:2020457 BRL1 "BRI1 like" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1427 (507.4 bits), Expect = 4.5e-146, P = 4.5e-146
Identities = 372/984 (37%), Positives = 520/984 (52%)
Query: 2 LSFNALSGSLPEE-LSDLPI-LTFA-AEKNQLSGSLPSW-LGNWNQMESLLLSSNQFIG- 56
LS+N LS +PE +SD P L + N LSG G + LS N G
Sbjct: 182 LSYNILSDKIPESFISDFPASLKYLDLTHNNLSGDFSDLSFGICGNLTFFSLSQNNLSGD 241
Query: 57 KIPPEIGNCSMLKSISLSNNFLSGSIPR-ELCTS-ESLEEIDLDGNLLTGTIEGVFEK-C 113
K P + NC L+++++S N L+G IP E S ++L+++ L N L+G I C
Sbjct: 242 KFPITLPNCKFLETLNISRNNLAGKIPNGEYWGSFQNLKQLSLAHNRLSGEIPPELSLLC 301
Query: 114 SNLSQLVIFRNHIYGSIP-EYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFS-AANN 171
L L + N G +P ++ + + L L+L +N +G ++ + T + + A N
Sbjct: 302 KTLVILDLSGNTFSGELPSQFTACVWLQNLNLGNNYLSGDFLNTVVSKITGITYLYVAYN 361
Query: 172 LLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLD---LNSNLFDGIIPYE 228
+ GS+P + N + L L L++N G++P +L + VL+ + +N G +P E
Sbjct: 362 NISGSVPISLTNCSNLRVLDLSSNGFTGNVPSGFCSLQSSPVLEKILIANNYLSGTVPME 421
Query: 229 LGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPD 288
LG C SL T+DL N L+G IP++I L L LV+ NNL+G IP + N+
Sbjct: 422 LGKCKSLKTIDLSFNELTGPIPKEIWMLPNLSDLVMWANNLTGTIPE--GVCVKGGNLET 479
Query: 289 LSFIQHHGVFDLSYNRLSGPIPEELGSCXXXXXXXXXXXXXSGKIPGSLSRLTNLTTLDL 348
L L+ N L+G IPE + C +GKIP + L+ L L L
Sbjct: 480 LI---------LNNNLLTGSIPESISRCTNMIWISLSSNRLTGKIPSGIGNLSKLAILQL 530
Query: 349 SRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTS 408
N L+G +P + G+ L L L +N LTG +P L S GLV + G+ +SGK
Sbjct: 531 GNNSLSGNVPRQLGNCKSLIWLDLNSNNLTGDLPGELASQAGLV---MPGS-VSGK---Q 583
Query: 409 FGNLKELTHLDL----SFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWK 464
F ++ D E +G L L +V SG +++ SA
Sbjct: 584 FAFVRNEGGTDCRGAGGLVEFEGIRAERLER-LPMVHSCPATRIYSGMT--MYTFSANGS 640
Query: 465 IATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLC 524
+ ++S N G +P GN+ YL L+L N+ TG IP G L + LD+S N L
Sbjct: 641 MIYFDISYNAVSGFIPPGYGNMGYLQVLNLGHNRITGTIPDSFGGLKAIGVLDLSHNNLQ 700
Query: 525 GQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCG---KIIGSNCQ 581
G +P ++ SLS L L ++ N L G +P G N LCG + GS +
Sbjct: 701 GYLPGSLGSLSFLSDLDVSNNNLTGPIPFGGQLTTFPVSRYANNSGLCGVPLRPCGSAPR 760
Query: 582 VKTFXXXXXXXXXXXXXXVVGCVFIVLTTVIALRKQIKRRSRCSDPEEIEETKLNSFSDH 641
+ G F + V+ L + R + E+ E + S
Sbjct: 761 RPITSRIHAKKQTVATAVIAGIAFSFMCFVM-LVMALYRVRKVQKKEQKREKYIESLPTS 819
Query: 642 NLYFLSSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALP 701
S EPLSIN+A FE+PL +LT H+LEATN F ++G GGFG VYKA L
Sbjct: 820 GSCSWKLSSVPEPLSINVATFEKPLRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLR 879
Query: 702 DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGS 761
DG VA+KKL + QG REF AEMET+GK+KH+NLVPLLGYC EE+LLVYEYM GS
Sbjct: 880 DGSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGS 939
Query: 762 LDLWLRNRT---GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE 818
L+ L ++ G + L W R KIA GAARGLAFLHH PHIIHRD+K+SN+LL+E+
Sbjct: 940 LETVLHEKSSKKGGI-YLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDED 998
Query: 819 FEAKVADFGLARLISACETHVSTD-IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELV 877
FEA+V+DFG+ARL+SA +TH+S +AGT GY+PPEY QS R T +GDVYS+GVILLEL+
Sbjct: 999 FEARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELL 1058
Query: 878 TGKEPTGP-EFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMML-KMLRIAGDC 935
+GK+P P EF E NLVGW Q ++ + A++LDP ++T S + L L+IA C
Sbjct: 1059 SGKKPIDPGEFG--EDNNLVGWAKQLYREKRGAEILDPELVTDKSGDVELFHYLKIASQC 1116
Query: 936 LSDNPAMRPTMLHVLKFLKEIKVE 959
L D P RPTM+ ++ KE+K +
Sbjct: 1117 LDDRPFKRPTMIQLMAMFKEMKAD 1140
|
|
| TAIR|locus:2092810 BRL3 "BRI1-like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1427 (507.4 bits), Expect = 4.5e-146, P = 4.5e-146
Identities = 369/980 (37%), Positives = 519/980 (52%)
Query: 2 LSFNALSGSLPEE-LSDLP--ILTFAAEKNQLSGSLPSW-LGNWNQMESLLLSSNQFIG- 56
LS N S +PE ++D P + N ++G G + LS N G
Sbjct: 182 LSNNRFSDEIPETFIADFPNSLKHLDLSGNNVTGDFSRLSFGLCENLTVFSLSQNSISGD 241
Query: 57 KIPPEIGNCSMLKSISLSNNFLSGSIPRE--LCTSESLEEIDLDGNLLTGTIEGVFEK-C 113
+ P + NC +L++++LS N L G IP + ++L ++ L NL +G I C
Sbjct: 242 RFPVSLSNCKLLETLNLSRNSLIGKIPGDDYWGNFQNLRQLSLAHNLYSGEIPPELSLLC 301
Query: 114 SNLSQLVIFRNHIYGSIPE-YLSKLPLMVLDLDSNNFTG-IIPVSIWNSETLMEFSAANN 171
L L + N + G +P+ + S L L+L +N +G + + + N
Sbjct: 302 RTLEVLDLSGNSLTGQLPQSFTSCGSLQSLNLGNNKLSGDFLSTVVSKLSRITNLYLPFN 361
Query: 172 LLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLD---LNSNLFDGIIPYE 228
+ GS+P + N + L L L++N G +P +L + SVL+ + +N G +P E
Sbjct: 362 NISGSVPISLTNCSNLRVLDLSSNEFTGEVPSGFCSLQSSSVLEKLLIANNYLSGTVPVE 421
Query: 229 LGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPD 288
LG C SL T+DL N L+GLIP++I L +L LV+ NNL+G IP S N+
Sbjct: 422 LGKCKSLKTIDLSFNALTGLIPKEIWTLPKLSDLVMWANNLTGGIPE--SICVDGGNLET 479
Query: 289 LSFIQHHGVFDLSYNRLSGPIPEELGSCXXXXXXXXXXXXXSGKIPGSLSRLTNLTTLDL 348
L L+ N L+G +PE + C +G+IP + +L L L L
Sbjct: 480 LI---------LNNNLLTGSLPESISKCTNMLWISLSSNLLTGEIPVGIGKLEKLAILQL 530
Query: 349 SRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTS 408
N LTG IPSE G+ L L L +N LTG++P L S GLV + G+ +SGK
Sbjct: 531 GNNSLTGNIPSELGNCKNLIWLDLNSNNLTGNLPGELASQAGLV---MPGS-VSGK---Q 583
Query: 409 FGNLKELTHLDL----SFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWK 464
F ++ D E +G L + +V + SG +FS++ +
Sbjct: 584 FAFVRNEGGTDCRGAGGLVEFEGIRAERLEHF-PMVHSCPKTRIYSGMTMYMFSSNGS-- 640
Query: 465 IATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLC 524
+ +++S N G +P G + YL L+L N TG IP G L + LD+S N L
Sbjct: 641 MIYLDLSYNAVSGSIPLGYGAMGYLQVLNLGHNLLTGTIPDSFGGLKAIGVLDLSHNDLQ 700
Query: 525 GQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIG--SNCQV 582
G +P ++ LS L L ++ N L G +P G N LCG + S+
Sbjct: 701 GFLPGSLGGLSFLSDLDVSNNNLTGPIPFGGQLTTFPLTRYANNSGLCGVPLPPCSSGSR 760
Query: 583 KTFXXXXXXXXXXXXXXVVGCVFIVLTTVIALRKQIKRRSRCSDPEEIEETKLNSF--SD 640
T G VF + ++ L + R + E+ E + S S
Sbjct: 761 PTRSHAHPKKQSIATGMSAGIVFSFMC-IVMLIMALYRARKVQKKEKQREKYIESLPTSG 819
Query: 641 HNLYFLSSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAAL 700
+ + LSS EPLSIN+A FE+PL +LT H+LEATN F ++IG GGFG VYKA L
Sbjct: 820 SSSWKLSSVH--EPLSINVATFEKPLRKLTFAHLLEATNGFSADSMIGSGGFGDVYKAKL 877
Query: 701 PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNG 760
DG VA+KKL Q QG REF AEMET+GK+KH+NLVPLLGYC EE+LLVYEYM G
Sbjct: 878 ADGSVVAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYG 937
Query: 761 SLDLWLRNRT--GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE 818
SL+ L +T G + L W R KIA GAARGLAFLHH PHIIHRD+K+SN+LL+++
Sbjct: 938 SLETVLHEKTKKGGI-FLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQD 996
Query: 819 FEAKVADFGLARLISACETHVSTD-IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELV 877
F A+V+DFG+ARL+SA +TH+S +AGT GY+PPEY QS R T +GDVYS+GVILLEL+
Sbjct: 997 FVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELL 1056
Query: 878 TGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPM-MLKMLRIAGDCL 936
+GK+P PE + E NLVGW Q ++ + A++LDP ++T S + +L L+IA CL
Sbjct: 1057 SGKKPIDPE-EFGEDNNLVGWAKQLYREKRGAEILDPELVTDKSGDVELLHYLKIASQCL 1115
Query: 937 SDNPAMRPTMLHVLKFLKEI 956
D P RPTM+ V+ KE+
Sbjct: 1116 DDRPFKRPTMIQVMTMFKEL 1135
|
|
| TAIR|locus:2041150 BRL2 "BRI1-like 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1415 (503.2 bits), Expect = 8.4e-145, P = 8.4e-145
Identities = 368/998 (36%), Positives = 522/998 (52%)
Query: 2 LSFNALSGSLPEEL--SDLPILTFAAEKNQLSGSLPSW---LGNWNQMESLLLSSNQFIG 56
LS+N +G LP +L S + T N ++G + L + M L S N G
Sbjct: 159 LSYNNFTGKLPNDLFLSSKKLQTLDLSYNNITGPISGLTIPLSSCVSMTYLDFSGNSISG 218
Query: 57 KIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEG-VFEKCSN 115
I + NC+ LKS++LS N G IP+ + L+ +DL N LTG I + + C +
Sbjct: 219 YISDSLINCTNLKSLNLSYNNFDGQIPKSFGELKLLQSLDLSHNRLTGWIPPEIGDTCRS 278
Query: 116 LSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNS-ETLMEFSAANNLL 173
L L + N+ G IPE LS L LDL +NN +G P +I S +L +NNL+
Sbjct: 279 LQNLRLSYNNFTGVIPESLSSCSWLQSLDLSNNNISGPFPNTILRSFGSLQILLLSNNLI 338
Query: 174 EGSLPYEVGNAAALERLVLTNNMLKGHLPKEI-GNLSALSVLDLNSNLFDGIIPYELGDC 232
G P + +L ++N G +P ++ ++L L L NL G IP + C
Sbjct: 339 SGDFPTSISACKSLRIADFSSNRFSGVIPPDLCPGAASLEELRLPDNLVTGEIPPAISQC 398
Query: 233 ISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFI 292
L T+DL N L+G IP +I +L +L+ + +NN++G IP P++ +
Sbjct: 399 SELRTIDLSLNYLNGTIPPEIGNLQKLEQFIAWYNNIAGEIP------------PEIGKL 446
Query: 293 QHHGVFDLSYNRLSGPIPEELGSCXXXXXXXXXXXXXSGKIPGSLSRLTNLTTLDLSRNQ 352
Q+ L+ N+L+G IP E +C +G++P L+ L L L N
Sbjct: 447 QNLKDLILNNNQLTGEIPPEFFNCSNIEWVSFTSNRLTGEVPKDFGILSRLAVLQLGNNN 506
Query: 353 LTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLN--LTGNKLSGKVPTSFG 410
TG IP E G L L L N LTG IP LG G L+ L+GN ++ + G
Sbjct: 507 FTGEIPPELGKCTTLVWLDLNTNHLTGEIPPRLGRQPGSKALSGLLSGNTMA--FVRNVG 564
Query: 411 N-LKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMN 469
N K + L E G P L I +L SGP+ LF+ I ++
Sbjct: 565 NSCKGVGGLV----EFSGIRPERLLQIPSLKSCDFTR-MYSGPILSLFTRYQT--IEYLD 617
Query: 470 MSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPE 529
+S N G +P +G + L L+L N+ +GEIP +G L L D S NRL GQIPE
Sbjct: 618 LSYNQLRGKIPDEIGEMIALQVLELSHNQLSGEIPFTIGQLKNLGVFDASDNRLQGQIPE 677
Query: 530 TMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKII-----GSN----- 579
+ +LS L+ + L+ N L G +P+ G L N LCG + G+N
Sbjct: 678 SFSNLSFLVQIDLSNNELTGPIPQRGQLSTLPATQYANNPGLCGVPLPECKNGNNQLPAG 737
Query: 580 CQVKTFXXXXXXXXXXXXXXVVGCVFIVLTTVIALRKQIKRRSRCSDPEEIEET-KLNSF 638
+ V+G + + I + I R+R D ++ + L +
Sbjct: 738 TEEGKRAKHGTRAASWANSIVLGVLISAASVCILIVWAIAVRARRRDADDAKMLHSLQAV 797
Query: 639 SDHNLYFLSSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKA 698
+ + + + KEPLSIN+A F++ L +L ++EATN F ++IG GGFG V+KA
Sbjct: 798 NSATTWKIE--KEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASMIGHGGFGEVFKA 855
Query: 699 ALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758
L DG +VA+KKL + QG REF AEMETLGK+KH+NLVPLLGYC EE+LLVYE+M
Sbjct: 856 TLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQ 915
Query: 759 NGSLDLWLRN-RTGSLE-VLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN 816
GSL+ L RTG +LGW++R KIA GAA+GL FLHH PHIIHRD+K+SN+LL+
Sbjct: 916 YGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLD 975
Query: 817 EEFEAKVADFGLARLISACETHVSTD-IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLE 875
++ EA+V+DFG+ARLISA +TH+S +AGT GY+PPEY QS R T +GDVYS GV++LE
Sbjct: 976 QDMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLE 1035
Query: 876 LVTGKEPTGPE-FKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPM---------- 924
+++GK PT E F D NLVGW K ++G+ +V+D +L S
Sbjct: 1036 ILSGKRPTDKEEFGDT---NLVGWSKMKAREGKHMEVIDEDLLKEGSSESLNEKEGFEGG 1092
Query: 925 -----MLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957
ML+ L IA C+ D P+ RP ML V+ L+E++
Sbjct: 1093 VIVKEMLRYLEIALRCVDDFPSKRPNMLQVVASLRELR 1130
|
|
| TAIR|locus:2005498 BRI1 "BRASSINOSTEROID INSENSITIVE 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1399 (497.5 bits), Expect = 4.2e-143, P = 4.2e-143
Identities = 357/978 (36%), Positives = 516/978 (52%)
Query: 2 LSFNALSGSLPEELSDLPILTFA-AEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
+S N +SG + ++S L F N S +P +LG+ + ++ L +S N+ G
Sbjct: 207 ISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSR 263
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFE-KCSNLSQL 119
I C+ LK +++S+N G IP +SL+ + L N TG I C L+ L
Sbjct: 264 AISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGL 321
Query: 120 VIFRNHIYGSIPEYLSKLPLMV-LDLDSNNFTGIIPV-SIWNSETLMEFSAANNLLEGSL 177
+ NH YG++P + L+ L L SNNF+G +P+ ++ L + N G L
Sbjct: 322 DLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGEL 381
Query: 178 PYEVGN-AAALERLVLTNNMLKGH-LPKEIGN-LSALSVLDLNSNLFDGIIPYELGDCIS 234
P + N +A+L L L++N G LP N + L L L +N F G IP L +C
Sbjct: 382 PESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSE 441
Query: 235 LTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQH 294
L +L L N LSG IP + L++L+ L L N L G IP +L +++
Sbjct: 442 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ------------ELMYVKT 489
Query: 295 HGVFDLSYNRLSGPIPEELGSCXXXXXXXXXXXXXSGKIPGSLSRLTNLTTLDLSRNQLT 354
L +N L+G IP L +C +G+IP + RL NL L LS N +
Sbjct: 490 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 549
Query: 355 GPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKE 414
G IP+E GD L L L N G+IP ++ G + N K + +K+
Sbjct: 550 GNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKND--GMKK 607
Query: 415 LTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNL 474
H + E G L+ + + G F N+ + ++MS N+
Sbjct: 608 ECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF--LDMSYNM 665
Query: 475 FDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSL 534
G +P+ +G++ YL L+L N +G IP ++G+L L LD+S N+L G+IP+ M +L
Sbjct: 666 LSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 725
Query: 535 SNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCG----KIIGSNCQVKTFXXXXX 590
+ L + L+ N L G +P G + N LCG + SN
Sbjct: 726 TMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPSNADGYAHHQRSH 785
Query: 591 XX--XXXXXXXVVGCVF--IVLTTVIALRKQIKRRSRCSDPE-EIEETKLNSFSDH--NL 643
+G +F + + +I + +++++R R + E E+ + D N
Sbjct: 786 GRRPASLAGSVAMGLLFSFVCIFGLILVGREMRKRRRKKEAELEMYAEGHGNSGDRTANN 845
Query: 644 YFLSSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDG 703
+ KE LSIN+A FE+PL +LT +L+ATN F ++IG GGFG VYKA L DG
Sbjct: 846 TNWKLTGVKEALSINLAAFEKPLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDG 905
Query: 704 KTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLD 763
VA+KKL QG REF AEMET+GK+KH+NLVPLLGYC +E+LLVYE+M GSL+
Sbjct: 906 SAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLE 965
Query: 764 LWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823
L + + L W R KIA G+ARGLAFLHH +PHIIHRD+K+SN+LL+E EA+V
Sbjct: 966 DVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARV 1025
Query: 824 ADFGLARLISACETHVSTD-IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
+DFG+ARL+SA +TH+S +AGT GY+PPEY QS R +T+GDVYS+GV+LLEL+TGK P
Sbjct: 1026 SDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRP 1085
Query: 883 T-GPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADS--KPMMLKMLRIAGDCLSDN 939
T P+F D NLVGWV Q K + +DV DP ++ D + +L+ L++A CL D
Sbjct: 1086 TDSPDFGD---NNLVGWVKQHAKL-RISDVFDPELMKEDPALEIELLQHLKVAVACLDDR 1141
Query: 940 PAMRPTMLHVLKFLKEIK 957
RPTM+ V+ KEI+
Sbjct: 1142 AWRRPTMVQVMAMFKEIQ 1159
|
|
| UNIPROTKB|Q942F3 P0480C01.18-1 "cDNA clone:J033069J12, full insert sequence" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 1391 (494.7 bits), Expect = 2.9e-142, P = 2.9e-142
Identities = 351/915 (38%), Positives = 499/915 (54%)
Query: 71 ISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEG-VFEKCSNLSQLVIFRNHIYGS 129
+ L+ N +SG +P E L+ +DL GNL+ G + G C L L + NH+ G
Sbjct: 203 LDLALNRISG-VP-EFTNCSGLQYLDLSGNLIVGEVPGGALSDCRGLKVLNLSFNHLAGV 260
Query: 130 IPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNS-ETLMEFSAANNLLEGSLPYEVGNAAAL 187
P ++ L L L+L +NNF+G +P + + L S + N GS+P V + L
Sbjct: 261 FPPDIAGLTSLNALNLSNNNFSGELPGEAFAKLQQLTALSLSFNHFNGSIPDTVASLPEL 320
Query: 188 ERLVLTNNMLKGHLPKEIGN--LSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNL 245
++L L++N G +P + S L +L L +N G IP + +C SL +LDL N +
Sbjct: 321 QQLDLSSNTFSGTIPSSLCQDPNSKLHLLYLQNNYLTGGIPDAVSNCTSLVSLDLSLNYI 380
Query: 246 SGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRL 305
+G IP + DL LQ L+L N L G IP A++ + ++H L YN L
Sbjct: 381 NGSIPASLGDLGNLQDLILWQNELEGEIP---------ASLSRIQGLEH---LILDYNGL 428
Query: 306 SGPIPEELGSCXXXXXXXXXXXXXSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSI 365
+G IP EL C SG IP L +L+ L L LS N +GPIP E GD
Sbjct: 429 TGSIPPELAKCTKLNWISLASNRLSGPIPSWLGKLSYLAILKLSNNSFSGPIPPELGDCQ 488
Query: 366 KLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLT---------GNKLSGKVPTSFGNLKELT 416
L L L +NQL GSIP L G + + L ++LS + G+L E T
Sbjct: 489 SLVWLDLNSNQLNGSIPKELAKQSGKMNVGLIVGRPYVYLRNDELSSECRGK-GSLLEFT 547
Query: 417 HLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFD 476
+ ++L ++PS + N +Y+ G + F+ + + + +++S N D
Sbjct: 548 --SIRPDDLS-RMPSK--KLCNFTRMYV------GSTEYTFNKNGS--MIFLDLSYNQLD 594
Query: 477 GGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSN 536
+P LG++ YL ++L N +G IP L +L LD+S N+L G IP + +LS
Sbjct: 595 SAIPGELGDMFYLMIMNLGHNLLSGTIPSRLAEAKKLAVLDLSYNQLEGPIPNSFSALS- 653
Query: 537 LLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIG----SNCQVKTFXXXXXXX 592
L ++L+ N+L G +P G K N LCG + S+ +
Sbjct: 654 LSEINLSNNQLNGTIPELGSLATFPKSQYENNTGLCGFPLPPCDHSSPRSSNDHQSHRRQ 713
Query: 593 XXXXXXXVVG------CVFIVLTTVIALRKQIKRRSRCSDPEEIEETKLNSFSDHNLYFL 646
+G C+ +++ + + R+++K + + +++ +S + N +
Sbjct: 714 ASMASSIAMGLLFSLFCIIVIIIAIGSKRRRLKNEEASTSRDIYIDSRSHS-ATMNSDWR 772
Query: 647 SSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTV 706
+ LSIN+A FE+PL LTL ++EATN F IG GGFG VYKA L DGK V
Sbjct: 773 QNLSGTNLLSINLAAFEKPLQNLTLADLVEATNGFHIACQIGSGGFGDVYKAQLKDGKVV 832
Query: 707 AVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWL 766
A+KKL QG REFTAEMET+GK+KH+NLVPLLGYC EE+LLVY+YM GSL+ L
Sbjct: 833 AIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKAGEERLLVYDYMKFGSLEDVL 892
Query: 767 RNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADF 826
+R + L W+ R KIA GAARGLAFLHH PHIIHRD+K+SN+L++E+ EA+V+DF
Sbjct: 893 HDRKKIGKKLNWEARRKIAVGAARGLAFLHHNCIPHIIHRDMKSSNVLIDEQLEARVSDF 952
Query: 827 GLARLISACETHVSTD-IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGP 885
G+ARL+S +TH+S +AGT GY+PPEY QS R TT+GDVYS+GV+LLEL+TGK PT
Sbjct: 953 GMARLMSVVDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVVLLELLTGKPPT-- 1010
Query: 886 EFKDI-EGGNLVGWVFQKMKKGQAADVLDPTVLTAD-SKPM-MLKMLRIAGDCLSDNPAM 942
+ D E NLVGWV Q K + DV DP +L D S + +L+ L+IA CL D P+
Sbjct: 1011 DSADFGEDNNLVGWVKQHTKL-KITDVFDPELLKEDPSVELELLEHLKIACACLDDRPSR 1069
Query: 943 RPTMLHVLKFLKEIK 957
RPTML V+ KEI+
Sbjct: 1070 RPTMLKVMAMFKEIQ 1084
|
|
| TAIR|locus:2046525 AT2G33170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1375 (489.1 bits), Expect = 1.5e-140, P = 1.5e-140
Identities = 347/968 (35%), Positives = 500/968 (51%)
Query: 5 NALSGSLPEELSDLPILT-FAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIG 63
N LSG LPEE+ DL L A N L+G LP LGN N++ + N F G IP EIG
Sbjct: 167 NKLSGPLPEEIGDLYNLEELVAYTNNLTGPLPRSLGNLNKLTTFRAGQNDFSGNIPTEIG 226
Query: 64 NCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFR 123
C LK + L+ NF+SG +P+E+ L+E+ L N +G I ++L L ++
Sbjct: 227 KCLNLKLLGLAQNFISGELPKEIGMLVKLQEVILWQNKFSGFIPKDIGNLTSLETLALYG 286
Query: 124 NHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVG 182
N + G IP + + L L L N G IP + +ME + NLL G +P E+
Sbjct: 287 NSLVGPIPSEIGNMKSLKKLYLYQNQLNGTIPKELGKLSKVMEIDFSENLLSGEIPVELS 346
Query: 183 NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGN 242
+ L L L N L G +P E+ L L+ LDL+ N G IP + S+ L L +
Sbjct: 347 KISELRLLYLFQNKLTGIIPNELSKLRNLAKLDLSINSLTGPIPPGFQNLTSMRQLQLFH 406
Query: 243 NNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSY 302
N+LSG+IP+ + + L + S N LSG IP P +Q+N+ + +L
Sbjct: 407 NSLSGVIPQGLGLYSPLWVVDFSENQLSGKIP--PF-ICQQSNLI---------LLNLGS 454
Query: 303 NRLSGPIPEELGSCXXXXXXXXXXXXXSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFG 362
NR+ G IP + C +G+ P L +L NL+ ++L +N+ +GP+P E G
Sbjct: 455 NRIFGNIPPGVLRCKSLLQLRVVGNRLTGQFPTELCKLVNLSAIELDQNRFSGPLPPEIG 514
Query: 363 DSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSF 422
KLQ L+L NQ + ++P + L LV N++ N L+G +P+ N K L LDLS
Sbjct: 515 TCQKLQRLHLAANQFSSNLPNEISKLSNLVTFNVSSNSLTGPIPSEIANCKMLQRLDLSR 574
Query: 423 NELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRS 482
N G LP L ++ L L L N+ SG + N + + M NLF G +P
Sbjct: 575 NSFIGSLPPELGSLHQLEILRLSENRFSGNIPFTIGNLT--HLTELQMGGNLFSGSIPPQ 632
Query: 483 LGNLSYLT-NLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLS 541
LG LS L ++L N F+GEIPP++GNL L YL ++ N L G+IP T +LS+LL +
Sbjct: 633 LGLLSSLQIAMNLSYNDFSGEIPPEIGNLHLLMYLSLNNNHLSGEIPTTFENLSSLLGCN 692
Query: 542 LAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTFXXXXXXXXXXXXXXVV 601
+ N L G +P + I QN++ S GNK LCG + S C +
Sbjct: 693 FSYNNLTGQLPHTQIFQNMTLTSFLGNKGLCGGHLRS-CD-PSHSSWPHISSLKAGSARR 750
Query: 602 GCVFIVLTTVIALRKQIKRRSRCSDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSINIAM 661
G + I++++VI + + N Y KEP +
Sbjct: 751 GRIIIIVSSVIGGISLLLIAI-------VVHFLRNPVEPTAPYV----HDKEPFFQESDI 799
Query: 662 FEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHRE 721
+ P R T+ ILEAT F + I+G G GTVYKA +P GKT+AVKKL ++ +G+
Sbjct: 800 YFVPKERFTVKDILEATKGFHDSYIVGRGACGTVYKAVMPSGKTIAVKKL-ESNREGNNN 858
Query: 722 --------FTAEMETLGKVKHQNLVPLLGYCSFD--EEKLLVYEYMVNGSLDLWLRNRTG 771
F AE+ TLGK++H+N+V L +C LL+YEYM GSL L G
Sbjct: 859 NSNNTDNSFRAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELLHG--G 916
Query: 772 SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831
+ W R+ IA GAA GLA+LHH P IIHRDIK++NIL++E FEA V DFGLA++
Sbjct: 917 KSHSMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKV 976
Query: 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIE 891
I + + +AG++GYI PEY + + T + D+YSFGV+LLEL+TGK P P +
Sbjct: 977 IDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLE---Q 1033
Query: 892 GGNLVGWVFQKMKKGQ-AADVLDPTVLTADSKPM---MLKMLRIAGDCLSDNPAMRPTML 947
GG+L W ++ +++LDP + + + M+ + +IA C +P+ RPTM
Sbjct: 1034 GGDLATWTRNHIRDHSLTSEILDPYLTKVEDDVILNHMITVTKIAVLCTKSSPSDRPTMR 1093
Query: 948 HVLKFLKE 955
V+ L E
Sbjct: 1094 EVVLMLIE 1101
|
|
| TAIR|locus:2154344 AT5G48940 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 795 (284.9 bits), Expect = 2.7e-136, Sum P(2) = 2.7e-136
Identities = 198/574 (34%), Positives = 308/574 (53%)
Query: 1 MLSFNALSGSLPEELSDLP-ILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIP 59
++S L+G++ E+ D ++ N L G +PS LG ++ L L+SN GKIP
Sbjct: 112 VISNTNLTGAISSEIGDCSELIVIDLSSNSLVGEIPSSLGKLKNLQELCLNSNGLTGKIP 171
Query: 60 PEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNL-LTGTIEGVFEKCSNLSQ 118
PE+G+C LK++ + +N+LS ++P EL +LE I GN L+G I C NL
Sbjct: 172 PELGDCVSLKNLEIFDNYLSENLPLELGKISTLESIRAGGNSELSGKIPEEIGNCRNLKV 231
Query: 119 LVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSL 177
L + I GS+P L +L L L + S +G IP + N L+ +N L G+L
Sbjct: 232 LGLAATKISGSLPVSLGQLSKLQSLSVYSTMLSGEIPKELGNCSELINLFLYDNDLSGTL 291
Query: 178 PYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTT 237
P E+G LE+++L N L G +P+EIG + +L+ +DL+ N F G IP G+ +L
Sbjct: 292 PKELGKLQNLEKMLLWQNNLHGPIPEEIGFMKSLNAIDLSMNYFSGTIPKSFGNLSNLQE 351
Query: 238 LDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGV 297
L L +NN++G IP +++ +L + N +SG IP P++ ++ +
Sbjct: 352 LMLSSNNITGSIPSILSNCTKLVQFQIDANQISGLIP------------PEIGLLKELNI 399
Query: 298 FDLSYNRLSGPIPEELGSCXXXXXXXXXXXXXSGKIPGSLSRLTNLTTLDLSRNQLTGPI 357
F N+L G IP+EL C +G +P L +L NLT L L N ++G I
Sbjct: 400 FLGWQNKLEGNIPDELAGCQNLQALDLSQNYLTGSLPAGLFQLRNLTKLLLISNAISGVI 459
Query: 358 PSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTH 417
P E G+ L L L NN++TG IP +G L L L+L+ N LSG VP N ++L
Sbjct: 460 PLEIGNCTSLVRLRLVNNRITGEIPKGIGFLQNLSFLDLSENNLSGPVPLEISNCRQLQM 519
Query: 418 LDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDG 477
L+LS N L G LP SLS++ L L + N L+G + + + + + + +S N F+G
Sbjct: 520 LNLSNNTLQGYLPLSLSSLTKLQVLDVSSNDLTGKIPDSLGHLIS--LNRLILSKNSFNG 577
Query: 478 GLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEY-LDVSRNRLCGQIPETMCSLSN 536
+P SLG+ + L LDL N +G IP +L ++ L+ L++S N L G IPE + +L+
Sbjct: 578 EIPSSLGHCTNLQLLDLSSNNISGTIPEELFDIQDLDIALNLSWNSLDGFIPERISALNR 637
Query: 537 LLYLSLAENRLEG-MVPRSGICQNLSKISLTGNK 569
L L ++ N L G + SG+ +NL ++++ N+
Sbjct: 638 LSVLDISHNMLSGDLSALSGL-ENLVSLNISHNR 670
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LYN8 | EXS_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.5626 | 0.9416 | 0.7575 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh4_pm.C_LG_XII000448 | hypothetical protein (1237 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 959 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-105 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 5e-71 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-63 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 5e-50 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 1e-49 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 3e-48 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 7e-47 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 2e-45 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 1e-44 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 8e-43 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 1e-35 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 3e-33 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 6e-33 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 4e-32 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 2e-31 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 5e-31 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 6e-31 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-31 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 3e-30 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 5e-30 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 5e-29 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 8e-29 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 3e-28 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 7e-28 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 1e-27 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 5e-26 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 8e-26 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 1e-25 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 1e-25 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 1e-25 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 2e-25 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 2e-25 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 3e-25 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 3e-25 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 7e-25 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 1e-24 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 1e-24 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 3e-24 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 5e-24 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 5e-24 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 6e-24 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 7e-24 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 8e-24 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 1e-23 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 1e-23 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 1e-23 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 2e-23 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 2e-23 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 3e-23 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 3e-23 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 5e-23 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 5e-23 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 6e-23 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 7e-23 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 7e-23 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 1e-22 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 2e-22 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 3e-22 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 5e-22 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 1e-21 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 2e-21 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 3e-21 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 3e-21 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 3e-21 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 4e-21 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 5e-21 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 5e-21 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 6e-21 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 7e-21 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 8e-21 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 8e-21 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 1e-20 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 1e-20 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 4e-20 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 4e-20 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 5e-20 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 8e-20 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 9e-20 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 1e-19 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 1e-19 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 1e-19 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 1e-19 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 2e-19 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 2e-19 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 2e-19 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 3e-19 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 3e-19 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 3e-19 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 3e-19 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 3e-19 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 5e-19 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 5e-19 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 6e-19 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 7e-19 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 7e-19 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 8e-19 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 9e-19 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 9e-19 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 1e-18 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 2e-18 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 2e-18 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 2e-18 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 2e-18 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 3e-18 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 3e-18 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 3e-18 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 4e-18 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 4e-18 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 4e-18 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 5e-18 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 6e-18 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 6e-18 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 7e-18 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 7e-18 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 8e-18 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 1e-17 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 1e-17 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 2e-17 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 2e-17 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 2e-17 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 3e-17 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 3e-17 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 3e-17 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 3e-17 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 4e-17 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 4e-17 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 4e-17 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 5e-17 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 6e-17 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 9e-17 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 1e-16 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 1e-16 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 1e-16 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 2e-16 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 3e-16 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 3e-16 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 3e-16 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 4e-16 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 4e-16 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 5e-16 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 5e-16 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 7e-16 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 8e-16 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 8e-16 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 9e-16 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 1e-15 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 1e-15 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 1e-15 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 1e-15 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 2e-15 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 2e-15 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 2e-15 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 4e-15 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 5e-15 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 5e-15 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 6e-15 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 6e-15 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 6e-15 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 8e-15 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 8e-15 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 1e-14 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 1e-14 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 2e-14 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 2e-14 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 3e-14 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 4e-14 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 5e-14 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 5e-14 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 6e-14 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 6e-14 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 7e-14 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 8e-14 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 8e-14 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 9e-14 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 1e-13 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 1e-13 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 1e-13 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 1e-13 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 2e-13 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 2e-13 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 2e-13 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 2e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-13 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 3e-13 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 3e-13 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 3e-13 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 3e-13 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 4e-13 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 4e-13 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 5e-13 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 8e-13 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 8e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 9e-13 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 9e-13 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 9e-13 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 9e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-12 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 1e-12 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 1e-12 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 1e-12 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 2e-12 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 2e-12 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 2e-12 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 2e-12 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 3e-12 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 3e-12 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 3e-12 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 3e-12 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 3e-12 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 3e-12 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 3e-12 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 3e-12 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 4e-12 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 5e-12 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 7e-12 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 8e-12 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 9e-12 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 1e-11 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 1e-11 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 2e-11 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 2e-11 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 2e-11 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 2e-11 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 3e-11 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 3e-11 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 3e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-11 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 4e-11 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 4e-11 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 6e-11 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 7e-11 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 8e-11 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 9e-11 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 9e-11 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 1e-10 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 1e-10 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 1e-10 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 1e-10 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 1e-10 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 1e-10 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 2e-10 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 2e-10 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 2e-10 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 3e-10 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 3e-10 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 3e-10 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 4e-10 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 5e-10 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 5e-10 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 6e-10 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 1e-09 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 1e-09 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 1e-09 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 2e-09 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 2e-09 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 2e-09 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 2e-09 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 2e-09 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 2e-09 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 2e-09 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-09 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-09 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-09 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 3e-09 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 3e-09 | |
| cd05086 | 268 | cd05086, PTKc_Aatyk2, Catalytic domain of the Prot | 3e-09 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 4e-09 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 4e-09 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 5e-09 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 5e-09 | |
| cd05103 | 343 | cd05103, PTKc_VEGFR2, Catalytic domain of the Prot | 6e-09 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 6e-09 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 6e-09 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 7e-09 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 7e-09 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 8e-09 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 2e-08 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 2e-08 | |
| cd05105 | 400 | cd05105, PTKc_PDGFR_alpha, Catalytic domain of the | 2e-08 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 3e-08 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-08 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 4e-08 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 8e-08 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 1e-07 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 1e-07 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 1e-07 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 2e-07 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 3e-07 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 3e-07 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 3e-07 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 3e-07 | |
| cd05076 | 274 | cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do | 4e-07 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 4e-07 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 5e-07 | |
| cd05104 | 375 | cd05104, PTKc_Kit, Catalytic domain of the Protein | 6e-07 | |
| cd05107 | 401 | cd05107, PTKc_PDGFR_beta, Catalytic domain of the | 7e-07 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 8e-07 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 9e-07 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-06 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 1e-06 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 2e-06 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 2e-06 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 3e-06 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-06 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 6e-06 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 7e-06 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 2e-05 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 2e-05 | |
| cd00116 | 319 | cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo | 2e-05 | |
| cd05077 | 262 | cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do | 2e-05 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 2e-05 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 2e-05 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 2e-05 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 3e-05 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 3e-05 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 3e-05 | |
| cd05629 | 377 | cd05629, STKc_NDR_like_fungal, Catalytic domain of | 3e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 5e-05 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 7e-05 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 1e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 2e-04 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 3e-04 | |
| cd05626 | 381 | cd05626, STKc_LATS2, Catalytic domain of the Prote | 4e-04 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 4e-04 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 4e-04 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 5e-04 | |
| cd08226 | 328 | cd08226, PK_STRAD_beta, Pseudokinase domain of STE | 9e-04 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 0.001 | |
| cd05104 | 375 | cd05104, PTKc_Kit, Catalytic domain of the Protein | 0.001 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 0.001 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 0.001 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 0.001 | |
| cd00116 | 319 | cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo | 0.002 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 0.003 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 0.003 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 0.003 | |
| PRK15370 | 754 | PRK15370, PRK15370, E3 ubiquitin-protein ligase Sl | 0.003 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 0.003 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 349 bits (897), Expect = e-105
Identities = 298/958 (31%), Positives = 448/958 (46%), Gaps = 108/958 (11%)
Query: 37 WLG----NWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPREL-CTSES 91
W G N +++ S+ LS GKI I +++I+LSNN LSG IP ++ TS S
Sbjct: 60 WQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSS 119
Query: 92 LEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFT 150
L ++L N TG+I NL L + N + G IP + L VLDL N
Sbjct: 120 LRYLNLSNNNFTGSIPRGS--IPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLV 177
Query: 151 GIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSA 210
G IP S+ N +L + A+N L G +P E+G +L+ + L N L G +P EIG L++
Sbjct: 178 GKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTS 237
Query: 211 LSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270
L+ LDL N G IP LG+ +L L L N LSG IP I L +L L LS N+LS
Sbjct: 238 LNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLS 297
Query: 271 GPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLS 330
G IP + +Q+ + L N +G IP L S + L L +N S
Sbjct: 298 GEIPEL------------VIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFS 345
Query: 331 GKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGG 390
G+IP +L + NLT LDLS N LTG IP S L L L +N L G IP SLG+
Sbjct: 346 GEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRS 405
Query: 391 LVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLS 450
L ++ L N SG++P+ F L + LD+S N L G++ S ++ +L L L NK
Sbjct: 406 LRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFF 465
Query: 451 GPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNL 510
G + + F + ++ +++S N F G +PR LG+LS L L L ENK +GEIP +L +
Sbjct: 466 GGLPDSFGSK---RLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSC 522
Query: 511 MQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS----------GICQNL 560
+L LD+S N+L GQIP + + L L L++N+L G +P++ I N
Sbjct: 523 KKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNH 582
Query: 561 SKISL--------------TGNKDLCGKIIGSN---CQVKTFGKLALLHAFGLAGLVVGC 603
SL GN DLCG S C+ + C
Sbjct: 583 LHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWW--------FYITC 634
Query: 604 VF--IVLTTVIALRKQIKRRSRCSDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSINIAM 661
++ ++A R + + +E N L F S SK
Sbjct: 635 TLGAFLVLALVAFGFVFIRGRNNLELKRVE----NEDGTWELQFFDSKVSKS-------- 682
Query: 662 FEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHR 720
+T+ IL + + N+I G G YK ++ +G VK+++ +
Sbjct: 683 -------ITINDILSSLK---EENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSS 732
Query: 721 EFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDK 780
E +GK++H N+V L+G C ++ L++EY+ +L LRN L W++
Sbjct: 733 EIA----DMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN-------LSWER 781
Query: 781 RYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS 840
R KIA G A+ L FLH +P ++ ++ I+++ + E L + +
Sbjct: 782 RRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDE--------PHLRLSLPGLLC 833
Query: 841 TDIAGTF--GYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGW 898
TD Y+ PE ++ T + D+Y FG+IL+EL+TGK P EF G++V W
Sbjct: 834 TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG--VHGSIVEW 891
Query: 899 VFQKMKKGQAADVLDPTVLTADS--KPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954
+DP++ S + +++++ +A C + +P RP VLK L+
Sbjct: 892 ARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLE 949
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 254 bits (650), Expect = 5e-71
Identities = 175/481 (36%), Positives = 255/481 (53%), Gaps = 19/481 (3%)
Query: 2 LSFNALSGSLPEELSDLPIL-TFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
LS N +GS+P +P L T N LSG +P+ +G+++ ++ L L N +GKIP
Sbjct: 125 LSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPN 182
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
+ N + L+ ++L++N L G IPREL +SL+ I L N L+G I ++L+ L
Sbjct: 183 SLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLD 242
Query: 121 IFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPY 179
+ N++ G IP L L L L L N +G IP SI++ + L+ ++N L G +P
Sbjct: 243 LVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPE 302
Query: 180 EVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLD 239
V LE L L +N G +P + +L L VL L SN F G IP LG +LT LD
Sbjct: 303 LVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLD 362
Query: 240 LGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFD 299
L NNL+G IPE + L L+L N+L G IP L +
Sbjct: 363 LSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIP------------KSLGACRSLRRVR 410
Query: 300 LSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPS 359
L N SG +P E +V L ++NN L G+I + +L L L+RN+ G +P
Sbjct: 411 LQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPD 470
Query: 360 EFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLD 419
FG S +L+ L L NQ +G++P LGSL L++L L+ NKLSG++P + K+L LD
Sbjct: 471 SFG-SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLD 529
Query: 420 LSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGL 479
LS N+L GQ+P+S S + L L L N+LSG + + N + + +N+S+N G L
Sbjct: 530 LSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVES--LVQVNISHNHLHGSL 587
Query: 480 P 480
P
Sbjct: 588 P 588
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 231 bits (590), Expect = 4e-63
Identities = 147/409 (35%), Positives = 214/409 (52%), Gaps = 15/409 (3%)
Query: 2 LSFNALSGSLPEELSDLPILTFA-AEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
L+ N L G +P EL + L + N LSG +P +G + L L N G IP
Sbjct: 195 LASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPS 254
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
+GN L+ + L N LSG IP + + + L +DL N L+G I + + NL L
Sbjct: 255 SLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILH 314
Query: 121 IFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPY 179
+F N+ G IP L+ LP L VL L SN F+G IP ++ L + N L G +P
Sbjct: 315 LFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPE 374
Query: 180 EVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLD 239
+ ++ L +L+L +N L+G +PK +G +L + L N F G +P E + LD
Sbjct: 375 GLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLD 434
Query: 240 LGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFD 299
+ NNNL G I + D+ LQ L L+ N G +P F + +L D
Sbjct: 435 ISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPD----SFGSKRLENL---------D 481
Query: 300 LSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPS 359
LS N+ SG +P +LGS ++ L L+ N LSG+IP LS L +LDLS NQL+G IP+
Sbjct: 482 LSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPA 541
Query: 360 EFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTS 408
F + L L L NQL+G IP +LG++ LV++N++ N L G +P++
Sbjct: 542 SFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST 590
|
Length = 968 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 176 bits (450), Expect = 5e-50
Identities = 86/280 (30%), Positives = 130/280 (46%), Gaps = 39/280 (13%)
Query: 686 IIGDGGFGTVYKAALPDGK-----TVAVKKL-SQAKTQGHREFTAEMETLGKVKHQNLVP 739
+G+G FG VYK L VAVK L A Q EF E + K+ H N+V
Sbjct: 6 KLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVK 65
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF 799
LLG C+ +E ++V EYM G L +LR + L A ARG+ +L
Sbjct: 66 LLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRP--KELSLSDLLSFALQIARGMEYLESK- 122
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEY 854
+ IHRD+ A N L+ E K++DFGL+R + + + G +P PE
Sbjct: 123 --NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKG-----GKLPIRWMAPES 175
Query: 855 GQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913
+ G+ T++ DV+SFGV+L E+ T G+EP P + E V + +KKG L
Sbjct: 176 LKEGKFTSKSDVWSFGVLLWEIFTLGEEPY-PGMSNAE-------VLEYLKKG---YRLP 224
Query: 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953
++ ++ C +++P RPT +++ L
Sbjct: 225 K------PPNCPPELYKLMLQCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 175 bits (447), Expect = 1e-49
Identities = 82/275 (29%), Positives = 128/275 (46%), Gaps = 30/275 (10%)
Query: 686 IIGDGGFGTVYKAAL--PDGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVP 739
+G+G FG VYK L GK VAVK L + ++ EF E + K+ H N+V
Sbjct: 6 KLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVK 65
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF 799
LLG C+ +E +V EYM G L +LR L A ARG+ +L
Sbjct: 66 LLGVCTEEEPLYIVMEYMEGGDLLSYLRKNR---PKLSLSDLLSFALQIARGMEYLESK- 121
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGR 859
+ IHRD+ A N L+ E K++DFGL+R + + + ++ PE + G+
Sbjct: 122 --NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGK 179
Query: 860 STTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918
T++ DV+SFGV+L E+ T G++P P + E V + +K G L
Sbjct: 180 FTSKSDVWSFGVLLWEIFTLGEQPY-PGMSNEE-------VLEYLKNGY---RLPQ---- 224
Query: 919 ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953
++ + C +++P RPT +++ L
Sbjct: 225 --PPNCPPELYDLMLQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 172 bits (438), Expect = 3e-48
Identities = 84/287 (29%), Positives = 126/287 (43%), Gaps = 42/287 (14%)
Query: 685 NIIGDGGFGTVYKAALPDGKT----VAVKKL-SQAKTQGHREFTAEMETLGKVKHQNLVP 739
+G+G FG VYK L VAVK L A + ++F E + K+ H N+V
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLE-----VLGWDKRYKIACGAARGLAF 794
LLG C+ +E LV EYM G L +LR L A A+G+ +
Sbjct: 61 LLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY 120
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP--- 851
L +HRD+ A N L+ E+ K++DFGL+R + + + G +P
Sbjct: 121 LAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTG----GKLPIRW 173
Query: 852 --PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908
PE + G T++ DV+SFGV+L E+ T G P P + E V + ++KG
Sbjct: 174 MAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPY-PGLSNEE-------VLEYLRKGY- 224
Query: 909 ADVLD-PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954
L P + +ML C +P RPT +++ L+
Sbjct: 225 --RLPKPEYCPDELYELMLS-------CWQLDPEDRPTFSELVERLE 262
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 7e-47
Identities = 86/270 (31%), Positives = 128/270 (47%), Gaps = 27/270 (10%)
Query: 685 NIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQNLVPLLG 742
+G+G FG VY A GK VA+K + + K + RE E++ L K+KH N+V L
Sbjct: 5 EKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYD 64
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH-HGFTP 801
+++ LV EY G L L+ R G L + R+ L +LH G
Sbjct: 65 VFEDEDKLYLVMEYCEGGDLFDLLKKR-GRLSE--DEARF-YLRQILSALEYLHSKG--- 117
Query: 802 HIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRST 861
I+HRD+K NILL+E+ K+ADFGLAR + T GT Y+ PE
Sbjct: 118 -IVHRDLKPENILLDEDGHVKLADFGLARQLD--PGEKLTTFVGTPEYMAPEVLLGKGYG 174
Query: 862 TRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADS 921
D++S GVIL EL+TGK P F G + + +F+K+ K + ++ ++
Sbjct: 175 KAVDIWSLGVILYELLTGKPP----F---PGDDQLLELFKKIGKPKPPFPPPEWDISPEA 227
Query: 922 KPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
K ++ K+L +P R T L+
Sbjct: 228 KDLIRKLLVK-------DPEKRLTAEEALQ 250
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 164 bits (417), Expect = 2e-45
Identities = 88/271 (32%), Positives = 126/271 (46%), Gaps = 25/271 (9%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKL--SQAKTQGHREFTAEMETLGKVKHQNLVPLLG 742
+G G FGTVYKA GK VAVK L K++ + E+ L ++ H N+V L+
Sbjct: 6 KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH-HGFTP 801
+ LV EY G L +L L D+ KIA RGL +LH +G
Sbjct: 66 AFEDKDHLYLVMEYCEGGDLFDYLSRGG----PLSEDEAKKIALQILRGLEYLHSNG--- 118
Query: 802 HIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGR-S 860
IIHRD+K NILL+E K+ADFGLA+ + + T GT Y+ PE G
Sbjct: 119 -IIHRDLKPENILLDENGVVKIADFGLAKKLL-KSSSSLTTFVGTPWYMAPEVLLGGNGY 176
Query: 861 TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTAD 920
+ DV+S GVIL EL+TGK P F + Q +++ + +
Sbjct: 177 GPKVDVWSLGVILYELLTGKPP----FSGENILD----QLQLIRRILGPPLEFDEPKWSS 228
Query: 921 SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+++ CL+ +P+ RPT +L+
Sbjct: 229 GSEEAKDLIK---KCLNKDPSKRPTAEEILQ 256
|
Length = 260 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 1e-44
Identities = 76/209 (36%), Positives = 108/209 (51%), Gaps = 21/209 (10%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQNLVPLLGYC 744
+G+GGFGTVY A GK VA+K + + + E E+E L K+ H N+V L G
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH-HGFTPHI 803
+ LV EY GSL L+ G L D+ +I GL +LH +G I
Sbjct: 61 EDENHLYLVMEYCEGGSLKDLLKENEGKLS---EDEILRILLQILEGLEYLHSNG----I 113
Query: 804 IHRDIKASNILLNE-EFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRS-T 861
IHRD+K NILL+ + K+ADFGL++L+++ + + I GT Y+ PE +
Sbjct: 114 IHRDLKPENILLDSDNGKVKLADFGLSKLLTS-DKSLLKTIVGTPAYMAPEVLLGKGYYS 172
Query: 862 TRGDVYSFGVILLELVTGKEPTGPEFKDI 890
+ D++S GVIL EL PE KD+
Sbjct: 173 EKSDIWSLGVILYEL--------PELKDL 193
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 8e-43
Identities = 86/281 (30%), Positives = 133/281 (47%), Gaps = 43/281 (15%)
Query: 687 IGDGGFGTVYKA-ALPDGK----TVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPL 740
+G+G FG VYK DG+ VAVK L + ++ R EF E + K+ H N+V L
Sbjct: 7 LGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRL 66
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT 800
LG C+ E +V EYM G L +LR L + ++A A+G+ +L
Sbjct: 67 LGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLK---DLLQMALQIAKGMEYLESK-- 121
Query: 801 PHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYG 855
+ +HRD+ A N L+ E K++DFGL+R I + + G +P PE
Sbjct: 122 -NFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGG----GKLPIKWMAPESL 176
Query: 856 QSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914
+ G+ T++ DV+SFGV+L E+ T G++P P + E V + ++ G L
Sbjct: 177 KDGKFTSKSDVWSFGVLLWEIFTLGEQPY-PGMSNEE-------VLELLEDGY---RLPR 225
Query: 915 TVLTADSKPMMLK--MLRIAGDCLSDNPAMRPTMLHVLKFL 953
P L ML+ C + +P RPT +++ L
Sbjct: 226 PENC----PDELYELMLQ----CWAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 1e-35
Identities = 84/278 (30%), Positives = 123/278 (44%), Gaps = 36/278 (12%)
Query: 681 FCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVP 739
F IG GGFG VYKA GK VA+K + + + E++ L K KH N+V
Sbjct: 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIAC---GAARGLAFLH 796
G +E +V E+ GSL L++ +L +IA +GL +LH
Sbjct: 62 YYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTL------TESQIAYVCKELLKGLEYLH 115
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLA-RLISACETHVSTDIAGTFGYIPPEYG 855
+ IIHRDIKA+NILL + E K+ DFGL+ +L + + GT ++ PE
Sbjct: 116 ---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNT---MVGTPYWMAPEVI 169
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEPTG--PEFKDIEGGNLVGWVFQKMKKGQAADVLD 913
+ D++S G+ +EL GK P P K + K+ + +
Sbjct: 170 NGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF----------KIATNGPPGLRN 219
Query: 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
P + + K + K CL NP RPT +LK
Sbjct: 220 PEKWSDEFKDFLKK-------CLQKNPEKRPTAEQLLK 250
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 3e-33
Identities = 82/266 (30%), Positives = 131/266 (49%), Gaps = 25/266 (9%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF 746
+G G FG V++ + VA+K L ++F E++ L +++H++L+ L CS
Sbjct: 14 LGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSV 73
Query: 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHR 806
E ++ E M GSL +LR+ G +VL +AC A G+A+L + IHR
Sbjct: 74 GEPVYIITELMEKGSLLAFLRSPEG--QVLPVASLIDMACQVAEGMAYLE---EQNSIHR 128
Query: 807 DIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDV 866
D+ A NIL+ E+ KVADFGLARLI + ++S+D + + PE G +T+ DV
Sbjct: 129 DLAARNILVGEDLVCKVADFGLARLIKE-DVYLSSDKKIPYKWTAPEAASHGTFSTKSDV 187
Query: 867 YSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMM 925
+SFG++L E+ T G+ P G N V+ ++ G P + +M
Sbjct: 188 WSFGILLYEMFTYGQVP-------YPGMN-NHEVYDQITAGYRMPC--PAKCPQEIYKIM 237
Query: 926 LKMLRIAGDCLSDNPAMRPTMLHVLK 951
L+ C + P RP+ L+
Sbjct: 238 LE-------CWAAEPEDRPS-FKALR 255
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 6e-33
Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 29/214 (13%)
Query: 683 KTNIIGDGGFGTVYKAALPD-GKTVAVKK--LSQAKTQGHREFTAEMETLGKVKHQNLVP 739
+ ++G G FG+VY A D G+ +AVK LS + E+ L ++H N+V
Sbjct: 4 RGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVR 63
Query: 740 LLGYCSFDEEKLLVY---EYMVNGSLDLWLRNRTGSLE--VLGWDKRYKIACGAAR---- 790
G DEEK + EY+ GSL L + G L V+ ++Y R
Sbjct: 64 YYG-SERDEEKNTLNIFLEYVSGGSLSS-LLKKFGKLPEPVI---RKY------TRQILE 112
Query: 791 GLAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI-SACETHVSTDIAGTFG 848
GLA+LH +G I+HRDIK +NIL++ + K+ADFG A+ + + + GT
Sbjct: 113 GLAYLHSNG----IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPY 168
Query: 849 YIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
++ PE + D++S G ++E+ TGK P
Sbjct: 169 WMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPP 202
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 4e-32
Identities = 68/211 (32%), Positives = 106/211 (50%), Gaps = 23/211 (10%)
Query: 684 TNIIGDGGFGTVYKAAL--PDGK--TVAVKKL-SQAKTQGHREFTAEMETLGKVKHQNLV 738
+IG G FG V + L P K VA+K L + + + +F E +G+ H N++
Sbjct: 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNII 68
Query: 739 PLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HH 797
L G + +++ EYM NGSLD +LR G V + + G A G+ +L
Sbjct: 69 RLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVG---QLVGMLRGIASGMKYLSEM 125
Query: 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----P 852
+ +HRD+ A NIL+N KV+DFGL+R + E +T G G IP P
Sbjct: 126 NY----VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTT--KG--GKIPIRWTAP 177
Query: 853 EYGQSGRSTTRGDVYSFGVILLELVT-GKEP 882
E + T+ DV+SFG+++ E+++ G+ P
Sbjct: 178 EAIAYRKFTSASDVWSFGIVMWEVMSYGERP 208
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 2e-31
Identities = 72/197 (36%), Positives = 99/197 (50%), Gaps = 7/197 (3%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF 746
+G G FG V+ VAVK L T F E + + K++H LV L CS
Sbjct: 14 LGAGQFGEVWMGTWNGTTKVAVKTLKPG-TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSE 72
Query: 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHR 806
+E +V EYM GSL +L++ G L + +A A G+A+L + + IHR
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKSGEGK--KLRLPQLVDMAAQIAEGMAYLE---SRNYIHR 127
Query: 807 DIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDV 866
D+ A NIL+ E K+ADFGLARLI E + PE GR T + DV
Sbjct: 128 DLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDV 187
Query: 867 YSFGVILLELVT-GKEP 882
+SFG++L E+VT G+ P
Sbjct: 188 WSFGILLTEIVTYGRVP 204
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 5e-31
Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 13/207 (6%)
Query: 680 NFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQN 736
N+ ++IG G FG VYK L G VA+K++S K + + E++ L +KH N
Sbjct: 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSL-EVLGWDKRYKIACGAARGLAFL 795
+V +G + ++ EY NGSL + + G E L Y++ +GLA+L
Sbjct: 61 IVKYIGSIETSDSLYIILEYAENGSL-RQIIKKFGPFPESLVAVYVYQVL----QGLAYL 115
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG 855
H +IHRDIKA+NIL ++ K+ADFG+A ++ + + GT ++ PE
Sbjct: 116 H---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLND-VSKDDASVVGTPYWMAPEVI 171
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEP 882
+ ++T D++S G ++EL+TG P
Sbjct: 172 EMSGASTASDIWSLGCTVIELLTGNPP 198
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 6e-31
Identities = 73/213 (34%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 679 NNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQN 736
++ + ++G G G VYK P GK A+KK+ + R + E++TL +
Sbjct: 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPY 60
Query: 737 LVPLLGYCSFDEEKL--LVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAARGLA 793
+V Y +F +E +V EYM GSL DL + VL IA +GL
Sbjct: 61 VVKC--YGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLA-----YIARQILKGLD 113
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA----CETHVSTDIAGTFGY 849
+LH HIIHRDIK SN+L+N + E K+ADFG+++++ C T V GT Y
Sbjct: 114 YLHT--KRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFV-----GTVTY 166
Query: 850 IPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
+ PE Q + D++S G+ LLE GK P
Sbjct: 167 MSPERIQGESYSYAADIWSLGLTLLECALGKFP 199
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 7e-31
Identities = 84/270 (31%), Positives = 132/270 (48%), Gaps = 5/270 (1%)
Query: 5 NALSGSLPEEL---SDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPE 61
N SG +P+ L ++L +L + N L+G +P L + + L+L SN G+IP
Sbjct: 342 NKFSGEIPKNLGKHNNLTVLDLST--NNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKS 399
Query: 62 IGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVI 121
+G C L+ + L +N SG +P E + +D+ N L G I +L L +
Sbjct: 400 LGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSL 459
Query: 122 FRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEV 181
RN +G +P+ L LDL N F+G +P + + LM+ + N L G +P E+
Sbjct: 460 ARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDEL 519
Query: 182 GNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLG 241
+ L L L++N L G +P + LS LDL+ N G IP LG+ SL +++
Sbjct: 520 SSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNIS 579
Query: 242 NNNLSGLIPEKIADLAQLQCLVLSHNNLSG 271
+N+L G +P A LA V + +L G
Sbjct: 580 HNHLHGSLPSTGAFLAINASAVAGNIDLCG 609
|
Length = 968 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 3e-30
Identities = 88/283 (31%), Positives = 129/283 (45%), Gaps = 53/283 (18%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKL---SQAKTQGHREFTAEMETLGKVKHQNLVPLLGY 743
IG G FG V G+ VAVK L S A F AE + ++H NLV LLG
Sbjct: 14 IGKGEFGDVMLGDY-RGQKVAVKCLKDDSTAAQA----FLAEASVMTTLRHPNLVQLLGV 68
Query: 744 CSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHI 803
+V EYM GSL +LR+R + V+ ++ A G+ +L +
Sbjct: 69 VLQGNPLYIVTEYMAKGSLVDYLRSRGRA--VITLAQQLGFALDVCEGMEYLE---EKNF 123
Query: 804 IHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSG 858
+HRD+ A N+L++E+ AKV+DFGLA+ A + S G +P PE +
Sbjct: 124 VHRDLAARNVLVSEDLVAKVSDFGLAK--EASQGQDS-------GKLPVKWTAPEALREK 174
Query: 859 RSTTRGDVYSFGVILLELVT-GKEPTGPE-FKDIEGGNLVGWVFQKMKKG---QAADVLD 913
+ +T+ DV+SFG++L E+ + G+ P KD V ++KG +A +
Sbjct: 175 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---------VVPHVEKGYRMEAPEGCP 225
Query: 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
P V K M DC +PA RPT + + L I
Sbjct: 226 PEVY----KVMK--------DCWELDPAKRPTFKQLREQLALI 256
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 119 bits (301), Expect = 5e-30
Identities = 80/264 (30%), Positives = 121/264 (45%), Gaps = 32/264 (12%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF 746
+G G FG V++ + VAVK L + T ++F AE + + K++H L+ L C+
Sbjct: 14 LGAGQFGEVWEGLWNNTTPVAVKTL-KPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTL 72
Query: 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHR 806
+E +V E M GSL +L+ G L + +A A G+A+L + IHR
Sbjct: 73 EEPIYIVTELMKYGSLLEYLQGGAGR--ALKLPQLIDMAAQVASGMAYLE---AQNYIHR 127
Query: 807 DIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDV 866
D+ A N+L+ E KVADFGLAR+I + PE R + + DV
Sbjct: 128 DLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDV 187
Query: 867 YSFGVILLELVT-GKEP----TGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADS 921
+SFG++L E+VT G+ P T E V Q++ +G P +
Sbjct: 188 WSFGILLTEIVTYGRMPYPGMTNAE------------VLQQVDQGYRMPC--PPGCPKEL 233
Query: 922 KPMMLKMLRIAGDCLSDNPAMRPT 945
+ML DC ++P RPT
Sbjct: 234 YDIML-------DCWKEDPDDRPT 250
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 5e-29
Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 35/268 (13%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKK-LSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
+G G G V K P GK +AVK + ++ E++ L K +V G
Sbjct: 9 LGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAF 68
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSL--EVLGWDKRYKIACGAARGLAFLHHGFTPH 802
+ + + EYM GSLD L+ G + +LG KIA +GL +LH
Sbjct: 69 YNNGDISICMEYMDGGSLDKILKEVQGRIPERILG-----KIAVAVLKGLTYLHE--KHK 121
Query: 803 IIHRDIKASNILLNEEFEAKVADFGLA-RLISACETHVSTDIAGTFGYIPPEYGQSGRST 861
IIHRD+K SNIL+N + K+ DFG++ +L+++ ++ GT Y+ PE Q +
Sbjct: 122 IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS----LAKTFVGTSSYMAPERIQGNDYS 177
Query: 862 TRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD--PTVLTA 919
+ D++S G+ L+EL TG+ P PE +G +F+ ++ +++ P L +
Sbjct: 178 VKSDIWSLGLSLIELATGRFPYPPENDPPDG------IFELLQY-----IVNEPPPRLPS 226
Query: 920 D--SKPMMLKMLRIAGDCLSDNPAMRPT 945
S CL +P RP+
Sbjct: 227 GKFSPDFQD----FVNLCLIKDPRERPS 250
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 119 bits (298), Expect = 8e-29
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 24/278 (8%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKT---QGHREFTAEMETLGKVKHQ-NLVPLLG 742
+G+G FG VY A D K VA+K L++ + F E++ L + H N+V L
Sbjct: 8 LGEGSFGEVYLA--RDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYD 65
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH 802
+ + LV EY+ GSL+ L+ G L + I L +LH
Sbjct: 66 FFQDEGSLYLVMEYVDGGSLEDLLKKI-GRKGPLSESEALFILAQILSALEYLHSK---G 121
Query: 803 IIHRDIKASNILLNEE-FEAKVADFGLARLISACETHVS-----TDIAGTFGYIPPEYGQ 856
IIHRDIK NILL+ + K+ DFGLA+L+ + S + GT GY+ PE
Sbjct: 122 IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLL 181
Query: 857 S---GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913
+++ D++S G+ L EL+TG P F+ + + + + + +
Sbjct: 182 GLSLAYASSSSDIWSLGITLYELLTGLPP----FEGEKNSSATSQTLKIILELPTPSLAS 237
Query: 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
P + ++ + + + L+ +P R + L
Sbjct: 238 P-LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274
|
Length = 384 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 3e-28
Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 38/274 (13%)
Query: 683 KTNIIGDGGFGTVYKAA-LPDGKT----VAVKKLSQAKT-QGHREFTAEMETLGKVKHQN 736
K ++G G FGTVYK +P+G+ VA+K L + + + ++E E + V H +
Sbjct: 11 KIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPH 70
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRN---RTGSLEVLGWDKRYKIACGAARGLA 793
+V LLG C + L+ + M G L ++RN GS +L W A+G++
Sbjct: 71 VVRLLGIC-LSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNW------CVQIAKGMS 123
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGT-FGYIPP 852
+L ++HRD+ A N+L+ K+ DFGLA+L+ E + ++
Sbjct: 124 YLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMAL 180
Query: 853 EYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911
E T + DV+S+GV + EL+T G +P ++ I + ++KG+ +
Sbjct: 181 ESILHRIYTHKSDVWSYGVTVWELMTFGAKP----YEGIPAVE----IPDLLEKGER--L 230
Query: 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT 945
P + T D +++K C + RPT
Sbjct: 231 PQPPICTIDVYMVLVK-------CWMIDAESRPT 257
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 7e-28
Identities = 75/219 (34%), Positives = 105/219 (47%), Gaps = 39/219 (17%)
Query: 681 FCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHRE---FTA--EMETLGKVKH 734
+ K IG+G +G VYKA G+ VA+KK+ + + +E TA E++ L K++H
Sbjct: 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKI---RMENEKEGFPITAIREIKLLQKLRH 57
Query: 735 QNLVPLLGYCSFDEEK---LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAAR- 790
N+V L + K +V+EYM DL TG L+ K +
Sbjct: 58 PNIVRLKEIV-TSKGKGSIYMVFEYM---DHDL-----TGLLD----SPEVKFTESQIKC 104
Query: 791 -------GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDI 843
GL +LH I+HRDIK SNIL+N + K+ADFGLAR + + T+
Sbjct: 105 YMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNR 161
Query: 844 AGTFGYIPPE--YGQSGRSTTRGDVYSFGVILLELVTGK 880
T Y PPE G + R D++S G IL EL GK
Sbjct: 162 VITLWYRPPELLLGAT-RYGPEVDMWSVGCILAELFLGK 199
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 1e-27
Identities = 84/289 (29%), Positives = 127/289 (43%), Gaps = 45/289 (15%)
Query: 687 IGDGGFGTVYKAAL-----PDGKT-VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVP 739
+G G FG VY+ + +T VA+K +++ + R EF E + + ++V
Sbjct: 14 LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVR 73
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNR------TGSLEVLGWDKRYKIACGAARGLA 793
LLG S + L+V E M G L +LR+R L K ++A A G+A
Sbjct: 74 LLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMA 133
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDI--AGTFGYIP 851
+L +HRD+ A N ++ E+ K+ DFG+ R I TD G G +P
Sbjct: 134 YLA---AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIY------ETDYYRKGGKGLLP 184
Query: 852 -----PEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906
PE + G TT+ DV+SFGV+L E+ T E + E V
Sbjct: 185 VRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI--------- 235
Query: 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955
LD D +L+++R+ C NP MRPT L ++ LK+
Sbjct: 236 -DGGHLDLPENCPD---KLLELMRM---CWQYNPKMRPTFLEIVSSLKD 277
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 5e-26
Identities = 94/320 (29%), Positives = 141/320 (44%), Gaps = 60/320 (18%)
Query: 662 FEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAAL-----PDGK-TVAVKKL-SQA 714
+E P RLTL L G+G FG V KA P+ TVAVK L A
Sbjct: 7 WELPRDRLTLGKPL------------GEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA 54
Query: 715 KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSL 773
+ + +EME + + KH+N++ LLG C+ + +V EY +G+L +LR R
Sbjct: 55 TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPG 114
Query: 774 EVLGWDKRYKI------------ACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEA 821
E D A ARG+ FL + IHRD+ A N+L+ E+
Sbjct: 115 EYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLVTEDHVM 171
Query: 822 KVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLEL 876
K+ADFGLAR I + + T T G +P PE T + DV+SFGV+L E+
Sbjct: 172 KIADFGLARDIHHIDYYRKT----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEI 227
Query: 877 VTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCL 936
T G + I V +F+ +K+G ++ +++ DC
Sbjct: 228 FT---LGGSPYPGIP----VEELFKLLKEGYR---MEKPQNCTQELYHLMR------DCW 271
Query: 937 SDNPAMRPTMLHVLKFLKEI 956
+ P+ RPT +++ L +
Sbjct: 272 HEVPSQRPTFKQLVEDLDRM 291
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 8e-26
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 28/278 (10%)
Query: 680 NFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAK-TQGHREFT-AEMETLGKVKHQN 736
+ IG G FG VY DGK +K++ + ++ RE E++ L K+ H N
Sbjct: 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPN 60
Query: 737 LVPLLGYCSFDEEKLL--VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAF 794
++ Y SF+E+ L V EY G L ++ + + ++ L +
Sbjct: 61 IIKY--YESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKY 118
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY 854
LH + I+HRDIK NI L K+ DFG+++++S+ T + GT Y+ PE
Sbjct: 119 LH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKT-VVGTPYYLSPEL 174
Query: 855 GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914
Q+ + D++S G +L EL T K P F EG NL+ + K+ KGQ + P
Sbjct: 175 CQNKPYNYKSDIWSLGCVLYELCTLKHP----F---EGENLLE-LALKILKGQYPPI--P 224
Query: 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952
+ +++ + ++ +L+ +P RP++ +L+
Sbjct: 225 SQYSSELRNLVSSLLQK-------DPEERPSIAQILQS 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 1e-25
Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 28/218 (12%)
Query: 687 IGDGGFGTVYKAALPDGKT------VAVKKLSQ-AKTQGHREFTAEMETLGKVKHQNLVP 739
+G+G FG V+ + VAVK L + A ++F E E L +H+N+V
Sbjct: 13 LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR----------YKIACGAA 789
G C+ + ++V+EYM +G L+ +LR+ L +IA A
Sbjct: 73 FYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIA 132
Query: 790 RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGT--- 846
G+ +L + H +HRD+ N L+ + K+ DFG++R + + + + G
Sbjct: 133 SGMVYLA---SQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYY---RVGGHTML 186
Query: 847 -FGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 882
++PPE + TT DV+SFGV+L E+ T GK+P
Sbjct: 187 PIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQP 224
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 1e-25
Identities = 72/222 (32%), Positives = 118/222 (53%), Gaps = 34/222 (15%)
Query: 679 NNFCKTNIIGDGGFGTVYKAAL--PDGK--TVAVKKLSQAKTQGHR-EFTAEMETLGKVK 733
++ K +IG G FG V++ L P K VA+K L T+ R +F +E +G+
Sbjct: 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFS 64
Query: 734 HQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTG---SLEVLGWDKRYKIACGAAR 790
H N++ L G + + +++ EYM NG+LD +LR+ G S +++G + G A
Sbjct: 65 HHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLR------GIAA 118
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF--- 847
G+ +L + +HRD+ A NIL+N E KV+DFGL+R++ D GT+
Sbjct: 119 GMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVL-------EDDPEGTYTTS 168
Query: 848 -GYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 882
G IP PE + T+ DV+SFG+++ E+++ G+ P
Sbjct: 169 GGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERP 210
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 1e-25
Identities = 65/199 (32%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQNLVPLLGYCS 745
IG G FG VYK L VAVK + F E E L + H N+V L+G C
Sbjct: 3 IGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV 62
Query: 746 FDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIH 805
+ +V E + GSL +LR + L V K +++ AA G+ +L + + IH
Sbjct: 63 QKQPIYIVMELVPGGSLLTFLRKKKNRLTV---KKLLQMSLDAAAGMEYLE---SKNCIH 116
Query: 806 RDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRS 860
RD+ A N L+ E K++DFG++R VS IP PE GR
Sbjct: 117 RDLAARNCLVGENNVLKISDFGMSREEEGGIYTVS----DGLKQIPIKWTAPEALNYGRY 172
Query: 861 TTRGDVYSFGVILLELVTG 879
T+ DV+S+G++L E +
Sbjct: 173 TSESDVWSYGILLWETFSL 191
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-25
Identities = 85/279 (30%), Positives = 138/279 (49%), Gaps = 38/279 (13%)
Query: 683 KTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQA----KTQGH-REFTAEMETLGKVKHQN 736
K ++G G FG+VY+ L DG AVK++S A Q ++ E+ L K++H N
Sbjct: 4 KGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPN 63
Query: 737 LVPLLGYCSFDEEKLLVY-EYMVNGSLDLWLRNRTGSL--EVLGWDKRYKIACGAARGLA 793
+V LG +E+ L ++ E + GSL L+ + GS V+ R + GL
Sbjct: 64 IVQYLG-TEREEDNLYIFLELVPGGSLAKLLK-KYGSFPEPVIRLYTRQILL-----GLE 116
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE 853
+LH + +HRDIK +NIL++ K+ADFG+A+ + S G+ ++ PE
Sbjct: 117 YLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS--FKGSPYWMAPE 171
Query: 854 Y-GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912
Q G D++S G +LE+ TGK P + +EG V VF+ + + +
Sbjct: 172 VIAQQGGYGLAADIWSLGCTVLEMATGKPP----WSQLEG---VAAVFKIGRSKELPPI- 223
Query: 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
P L+ ++K +LK CL +P++RPT +L+
Sbjct: 224 -PDHLSDEAKDFILK-------CLQRDPSLRPTAAELLE 254
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 106 bits (265), Expect = 2e-25
Identities = 72/205 (35%), Positives = 103/205 (50%), Gaps = 12/205 (5%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF 746
+G G FG V+ VA+K L Q + F AE + +++H LV L +
Sbjct: 14 LGAGQFGEVWMGYYNGHTKVAIKSLKQG-SMSPEAFLAEANLMKQLQHPRLVRLYAVVT- 71
Query: 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHR 806
E ++ EYM NGSL +L+ G L +K +A A G+AF+ + IHR
Sbjct: 72 QEPIYIITEYMENGSLVDFLKTPEGI--KLTINKLIDMAAQIAEGMAFIER---KNYIHR 126
Query: 807 DIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDV 866
D++A+NIL++E K+ADFGLARLI E + PE G T + DV
Sbjct: 127 DLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 186
Query: 867 YSFGVILLELVT-GKEP----TGPE 886
+SFG++L E+VT G+ P T PE
Sbjct: 187 WSFGILLTEIVTYGRIPYPGMTNPE 211
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 3e-25
Identities = 68/205 (33%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFT---AEMETLGKVKHQNLVPLLG 742
+G G FG V GK A+K L + K +E E L ++ H +V L
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKL-- 58
Query: 743 YCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAARGLAFLH-H 797
+ +F EEKL LV EY G L L E + Y +I L +LH
Sbjct: 59 HYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSE--ERARFYAAEIVLA----LEYLHSL 112
Query: 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQS 857
G II+RD+K NILL+ + K+ DFGLA+ +S+ + +T GT Y+ PE
Sbjct: 113 G----IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNT-FCGTPEYLAPEVLLG 167
Query: 858 GRSTTRGDVYSFGVILLELVTGKEP 882
D +S GV+L E++TGK P
Sbjct: 168 KGYGKAVDWWSLGVLLYEMLTGKPP 192
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 106 bits (265), Expect = 3e-25
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 34/221 (15%)
Query: 687 IGDGGFGTVYKAA----LPDGKT--VAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPL 740
+G+G FG V+ A LP+ VAVK L +A ++F E E L ++HQ++V
Sbjct: 13 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEV-----------LGWDKRYKIACGAA 789
G C+ L+V+EYM +G L+ +LR+ ++ L + IA A
Sbjct: 73 YGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIA 132
Query: 790 RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFG- 848
G+ +L + H +HRD+ N L+ + K+ DFG++R I STD G
Sbjct: 133 SGMVYLA---SLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI------YSTDYYRVGGR 183
Query: 849 ------YIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 882
++PPE + TT D++SFGV+L E+ T GK+P
Sbjct: 184 TMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQP 224
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 7e-25
Identities = 80/269 (29%), Positives = 120/269 (44%), Gaps = 23/269 (8%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF 746
+G G FG V+ VA+K L + T F E + + K++H+ LV L S
Sbjct: 14 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS- 71
Query: 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHR 806
+E +V EYM GSL +L+ G L + +A A G+A++ + +HR
Sbjct: 72 EEPIYIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVER---MNYVHR 126
Query: 807 DIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDV 866
D++A+NIL+ E KVADFGLARLI E + PE GR T + DV
Sbjct: 127 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 186
Query: 867 YSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMML 926
+SFG++L EL T P + E V ++++G P +M
Sbjct: 187 WSFGILLTELTTKGRVPYPGMVNRE-------VLDQVERGYRMPC--PPECPESLHDLMC 237
Query: 927 KMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955
+ C P RPT ++ FL++
Sbjct: 238 Q-------CWRKEPEERPTFEYLQAFLED 259
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 104 bits (263), Expect = 1e-24
Identities = 90/307 (29%), Positives = 121/307 (39%), Gaps = 65/307 (21%)
Query: 681 FCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA----EMETLGKVKHQ 735
+ K +G+G +G VYKA G+ VA+KK+ + E+ L ++KH
Sbjct: 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLD--NEEEGIPSTALREISLLKELKHP 58
Query: 736 NLVPLLGYCSFDEEKL-LVYEYMVNGSLDLW--LRNRTGSLEVLGWDKRYKIACGAARGL 792
N+V LL E KL LV+EY +DL L R G L K RGL
Sbjct: 59 NIVKLLDVI-HTERKLYLVFEYC---DMDLKKYLDKRPGPLS-PNLIKSI--MYQLLRGL 111
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS---ACETHVSTDIAGTFGY 849
A+ H I+HRD+K NIL+N + K+ADFGLAR TH T Y
Sbjct: 112 AYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVV----TLWY 164
Query: 850 IPPE--YGQSGRSTTRGDVYSFGVILLELVTGK-----------------------EPTG 884
PE G ST D++S G I E++TGK E +
Sbjct: 165 RAPEILLGSKHYSTAV-DIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESW 223
Query: 885 PEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP 944
P + F K VL L + ++ KML+ NPA R
Sbjct: 224 PGVTKLPDYKP---TFPKFPPKDLEKVLPR--LDPEGIDLLSKMLQY-------NPAKRI 271
Query: 945 TMLHVLK 951
+ LK
Sbjct: 272 SAKEALK 278
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 1e-24
Identities = 82/273 (30%), Positives = 132/273 (48%), Gaps = 31/273 (11%)
Query: 686 IIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS 745
IG G FG V G VAVK + T + F AE + +++H NLV LLG
Sbjct: 13 TIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 746 FDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHII 804
++ L +V EYM GSL +LR+R S VLG D K + + +L + +
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEAMEYLE---ANNFV 124
Query: 805 HRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRG 864
HRD+ A N+L++E+ AKV+DFGL + S+ + + T PE + + +T+
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKS 180
Query: 865 DVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKP 923
DV+SFG++L E+ + G+ P P + V +++KG D D P
Sbjct: 181 DVWSFGILLWEIYSFGRVPY-PRIPLKD-------VVPRVEKGYKMDAPD------GCPP 226
Query: 924 MMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
++ +++ C + A RP+ L + + L+ I
Sbjct: 227 VVYDVMK---QCWHLDAATRPSFLQLREQLEHI 256
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 3e-24
Identities = 83/273 (30%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 685 NIIGDGGFGTVYKA-ALPDGKTVAVK--KLSQAKTQGHREFTAEMETLGKVKHQNLVPLL 741
N IG G FG VY A L G+ +AVK ++ + +E EM+ L +KH NLV
Sbjct: 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65
Query: 742 GYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP 801
G E+ + EY G+L+ L + G + + Y + GLA+LH +
Sbjct: 66 GVEVHREKVYIFMEYCSGGTLEELLEH--GRILDEHVIRVYTLQL--LEGLAYLH---SH 118
Query: 802 HIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVST---DIAGTFGYIPPEYGQSG 858
I+HRDIK +NI L+ K+ DFG A + T + +AGT Y+ PE G
Sbjct: 119 GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGG 178
Query: 859 RSTTRG---DVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK---GQAADVL 912
+ G D++S G ++LE+ TGK P E + FQ M G +
Sbjct: 179 KGKGHGRAADIWSLGCVVLEMATGKRPW-SELDN---------EFQIMFHVGAGHKPPIP 228
Query: 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT 945
D L+ + K CL +P RPT
Sbjct: 229 DSLQLSPEGK-------DFLDRCLESDPKKRPT 254
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 102 bits (254), Expect = 5e-24
Identities = 80/270 (29%), Positives = 128/270 (47%), Gaps = 25/270 (9%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF 746
+G G FG V+ VA+K L + T F E + + K++H LVPL S
Sbjct: 14 LGQGCFGEVWMGTWNGTTKVAIKTL-KPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS- 71
Query: 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHR 806
+E +V E+M GSL +L+ G + L + +A A G+A++ + IHR
Sbjct: 72 EEPIYIVTEFMGKGSLLDFLKEGDG--KYLKLPQLVDMAAQIADGMAYIER---MNYIHR 126
Query: 807 DIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDV 866
D++A+NIL+ + K+ADFGLARLI E + PE GR T + DV
Sbjct: 127 DLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 186
Query: 867 YSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMML 926
+SFG++L ELVT P + E V +++++G + P L
Sbjct: 187 WSFGILLTELVTKGRVPYPGMVNRE-------VLEQVERGY-------RMPCPQGCPESL 232
Query: 927 -KMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955
+++++ C +P RPT ++ FL++
Sbjct: 233 HELMKL---CWKKDPDERPTFEYIQSFLED 259
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 5e-24
Identities = 69/217 (31%), Positives = 111/217 (51%), Gaps = 24/217 (11%)
Query: 687 IGDGGFGTVYKAAL--PDGK----TVAVKKLSQ-AKTQGHREFTAEMETLGKVKHQNLVP 739
+G+G FG VYK L P+ + +VA+K L + A+ + +EF E E + ++H N+V
Sbjct: 13 LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNR------------TGSLEVLGWDKRYKIACG 787
LLG C+ ++ +++EY+ +G L +L L IA
Sbjct: 73 LLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQ 132
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI-SACETHVSTDIAGT 846
A G+ +L + H +HRD+ A N L+ E K++DFGL+R I SA V +
Sbjct: 133 IAAGMEYLS---SHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLP 189
Query: 847 FGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 882
++PPE G+ TT D++SFGV+L E+ + G +P
Sbjct: 190 VRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQP 226
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 6e-24
Identities = 78/269 (28%), Positives = 116/269 (43%), Gaps = 27/269 (10%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF 746
+G G FG V+ VA+K + + +F E + + K+ H NLV L G C+
Sbjct: 12 LGSGQFGVVHLGKWRGKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTK 70
Query: 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH-HGFTPHIIH 805
+V EYM NG L +LR R G LG + + + +L +GF IH
Sbjct: 71 QRPIFIVTEYMANGCLLNYLRERKG---KLGTEWLLDMCSDVCEAMEYLESNGF----IH 123
Query: 806 RDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGD 865
RD+ A N L+ E+ KV+DFGLAR + + S + PPE R +++ D
Sbjct: 124 RDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSD 183
Query: 866 VYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPM 924
V+SFGV++ E+ + GK P F + E V ++ + A V T
Sbjct: 184 VWSFGVLMWEVFSEGKMPY-ERFSNSEVVESVSAGYRLYRPKLAP----TEVYT------ 232
Query: 925 MLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953
I C + P RP +L L
Sbjct: 233 ------IMYSCWHEKPEDRPAFKKLLSQL 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 7e-24
Identities = 70/223 (31%), Positives = 103/223 (46%), Gaps = 30/223 (13%)
Query: 687 IGDGGFGTVYKAALP------DGKTVAVKKLSQ-AKTQGHREFTAEMETLGKVKHQNLVP 739
IG G FG V++A P VAVK L + A +F E + + H N+V
Sbjct: 13 IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRT---------GSLEVLGWDKRY-------- 782
LLG C+ + L++EYM G L+ +LR+R+ +
Sbjct: 73 LLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQ 132
Query: 783 -KIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI-SACETHVS 840
IA A G+A+L +HRD+ N L+ E K+ADFGL+R I SA S
Sbjct: 133 LCIAKQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAS 189
Query: 841 TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 882
+ A ++PPE R TT DV+++GV+L E+ + G +P
Sbjct: 190 ENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQP 232
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 8e-24
Identities = 81/269 (30%), Positives = 125/269 (46%), Gaps = 23/269 (8%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF 746
+G+G FG V+ VAVK L + T F E + + K++H LV L S
Sbjct: 14 LGNGQFGEVWMGTWNGNTKVAVKTL-KPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS- 71
Query: 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHR 806
+E +V EYM GSL +L++ G L +A A G+A++ + IHR
Sbjct: 72 EEPIYIVTEYMSKGSLLDFLKDGEG--RALKLPNLVDMAAQVAAGMAYIER---MNYIHR 126
Query: 807 DIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDV 866
D++++NIL+ + K+ADFGLARLI E + PE GR T + DV
Sbjct: 127 DLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 186
Query: 867 YSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMML 926
+SFG++L ELVT P + E V +++++G + P+ L
Sbjct: 187 WSFGILLTELVTKGRVPYPGMNNRE-------VLEQVERGY-------RMPCPQDCPISL 232
Query: 927 KMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955
L + C +P RPT ++ FL++
Sbjct: 233 HELML--QCWKKDPEERPTFEYLQSFLED 259
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 682 CKTNII-----GDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQ 735
+T+I G G +G VY+ TVAVK L + + EF E + ++KH
Sbjct: 4 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHP 62
Query: 736 NLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL 795
NLV LLG C+ + ++ E+M G+L +LR EV Y +A + + +L
Sbjct: 63 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLY-MATQISSAMEYL 120
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGT---FGYIPP 852
+ IHRD+ A N L+ E KVADFGL+RL++ +T+ T AG + P
Sbjct: 121 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAP 174
Query: 853 EYGQSGRSTTRGDVYSFGVILLELVT 878
E + + + DV++FGV+L E+ T
Sbjct: 175 ESLAYNKFSIKSDVWAFGVLLWEIAT 200
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 1e-23
Identities = 65/223 (29%), Positives = 99/223 (44%), Gaps = 32/223 (14%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKK--LSQAKTQGHREFTAEMETLGKVKHQN 736
+ + +G+G G+V K L + + K + ++ E+E K
Sbjct: 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPY 60
Query: 737 LVPLLGYCSFDEEKLL--VYEYMVNGSLD------LWLRNRTGSLEVLGWDKRYKIACGA 788
+V G + + EY GSLD R G +VLG KIA
Sbjct: 61 IVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGE-KVLG-----KIAESV 114
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA-RLISACETHVSTDIAGTF 847
+GL++LH + IIHRDIK SNILL + + K+ DFG++ L+++ +AGTF
Sbjct: 115 LKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS--------LAGTF 163
Query: 848 G----YIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 886
Y+ PE Q + DV+S G+ LLE+ + P PE
Sbjct: 164 TGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPE 206
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 89/286 (31%), Positives = 126/286 (44%), Gaps = 48/286 (16%)
Query: 685 NIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLG 742
+IG G VY A LP+ + VA+K++ K Q E E++ + + H N+V
Sbjct: 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKY-- 64
Query: 743 YCSF--DEEKLLVYEYMVNGS-LDLW-LRNRTGSL-EVLGWDKRYKIAC---GAARGLAF 794
Y SF +E LV Y+ GS LD+ G L E + IA +GL +
Sbjct: 65 YTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAI-------IATVLKEVLKGLEY 117
Query: 795 LH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA---CETHVSTDIAGTFGYI 850
LH +G IHRDIKA NILL E+ K+ADFG++ ++ V GT ++
Sbjct: 118 LHSNG----QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWM 173
Query: 851 PPEYGQSGRS-TTRGDVYSFGVILLELVTGKEP--TGPEFKDIEGGNLVGWVFQKMKKGQ 907
PE + + D++SFG+ +EL TG P P K V M Q
Sbjct: 174 APEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK----------VL--MLTLQ 221
Query: 908 AADVLDPTVL--TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
DP L AD K ++ CL +P+ RPT +LK
Sbjct: 222 N----DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 66/217 (30%), Positives = 95/217 (43%), Gaps = 43/217 (19%)
Query: 685 NIIGDGGFGTVYKAALPDGKTV-AVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPL 740
+IG G FG V D K + A+K +++ K R E L ++ H LV L
Sbjct: 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNL 65
Query: 741 LGYCSF-DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKI--------------A 785
+ SF DEE + Y+V +DL +LG D RY +
Sbjct: 66 --WYSFQDEENM----YLV---VDL----------LLGGDLRYHLSQKVKFSEEQVKFWI 106
Query: 786 CGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG 845
C L +LH + IIHRDIK NILL+E+ + DF +A ++ ++T +G
Sbjct: 107 CEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT--LTTSTSG 161
Query: 846 TFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
T GY+ PE + D +S GV E + GK P
Sbjct: 162 TPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRP 198
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 77/285 (27%), Positives = 123/285 (43%), Gaps = 47/285 (16%)
Query: 687 IGDGGFGTVYKAA--LPDGK--TVAVKKLSQAKTQ-GHREFTAEMETLGKVKHQNLVPLL 741
+G G FG+V K + GK VAVK L Q G +EF E + ++ H +V L+
Sbjct: 3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62
Query: 742 GYCSFDEEKLLVYEYMVNGSLDLWLRNR--TGSLEVLGWDKRYKIACGAARGLAFLHHGF 799
G C E +LV E G L +L+ R ++ A A G+A+L
Sbjct: 63 GVCK-GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKEL------AHQVAMGMAYLE--- 112
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF--GYIPPEYGQS 857
+ H +HRD+ A N+LL +AK++DFG++R + A + AG + + PE
Sbjct: 113 SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINY 172
Query: 858 GRSTTRGDVYSFGVILLELVT-GKEP----TGPE-FKDIEGGNLVGWVFQKMKKGQAADV 911
G+ +++ DV+S+GV L E + G +P G E +E G +++ +
Sbjct: 173 GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG-------ERLPR------ 219
Query: 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
P + +ML C P RPT + +
Sbjct: 220 --PEECPQEIYSIMLS-------CWKYRPEDRPTFSELESTFRRD 255
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 3e-23
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 683 KTNIIGDGGFGTVYKAAL--PDGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQN 736
+G+G FG V T VAVK L+ + + HR +F E+E L + H+N
Sbjct: 8 FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHEN 67
Query: 737 LVPLLGYCSFDEEK--LLVYEYMVNGSLDLWLR---NRTGSLEVLGWDKRYKIACGAARG 791
+V G C + L+ EY+ +GSL +L+ ++ +L + +G
Sbjct: 68 IVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLL------LFSSQICKG 121
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG---TFG 848
+ +L + IHRD+ A NIL+ E K++DFGLA+++ + + G F
Sbjct: 122 MDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFW 178
Query: 849 YIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPT 883
Y PE ++ + ++ DV+SFGV L EL T +P+
Sbjct: 179 Y-APECLRTSKFSSASDVWSFGVTLYELFTYGDPS 212
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 99.9 bits (249), Expect = 3e-23
Identities = 88/283 (31%), Positives = 134/283 (47%), Gaps = 35/283 (12%)
Query: 685 NIIGDGGFGTVYKAAL--PDGKTV--AVKKLSQ-AKTQGHREFTAEMETLGKVKHQNLVP 739
+IG G FG VY L DG+ + AVK L++ + +F E + H N++
Sbjct: 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLS 60
Query: 740 LLGYCSFDE-EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACG--AARGLAFLH 796
LLG C E L+V YM +G L ++R+ T + V + I G A+G+ +L
Sbjct: 61 LLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTV-----KDLIGFGLQVAKGMEYLA 115
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPE 853
+ +HRD+ A N +L+E F KVADFGLAR I E H T ++ E
Sbjct: 116 ---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALE 172
Query: 854 YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913
Q+ + TT+ DV+SFGV+L EL+T P P D++ ++ ++ Q + Q D
Sbjct: 173 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP---DVDSFDITVYLLQGRRLLQPEYCPD 229
Query: 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
P +ML C P MRPT ++ +++I
Sbjct: 230 PLY------EVMLS-------CWHPKPEMRPTFSELVSRIEQI 259
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 99 bits (250), Expect = 5e-23
Identities = 81/296 (27%), Positives = 124/296 (41%), Gaps = 63/296 (21%)
Query: 681 FCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQA---KTQGHREFTAEMETLGKVK-HQ 735
F K IIG+G F TV A K A+K L + K + + E E L ++ H
Sbjct: 5 FGK--IIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHP 62
Query: 736 NLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLW-LRNRTGSLEVLGWDKRYKIACGAARGL 792
++ L Y +F DEE L V EY NG +L + GSL+ R+ A L
Sbjct: 63 GIIKL--YYTFQDEENLYFVLEYAPNG--ELLQYIRKYGSLDEK--CTRFYAA-EILLAL 115
Query: 793 AFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIA------- 844
+LH G IIHRD+K NILL+++ K+ DFG A+++ + S
Sbjct: 116 EYLHSKG----IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQ 171
Query: 845 ------------GTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP--TGPEFKDI 890
GT Y+ PE + D+++ G I+ +++TGK P E+
Sbjct: 172 IEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL-- 229
Query: 891 EGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM 946
FQK+ K + P D+K ++ K+L + +P R +
Sbjct: 230 --------TFQKILK---LEYSFPPNFPPDAKDLIEKLLVL-------DPQDRLGV 267
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 99.3 bits (247), Expect = 5e-23
Identities = 65/197 (32%), Positives = 100/197 (50%), Gaps = 7/197 (3%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF 746
+G G FG V+ + VAVK L + T + F E + ++H LV L +
Sbjct: 14 LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 72
Query: 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHR 806
+E ++ EYM GSL +L++ G +L K + A G+A++ + IHR
Sbjct: 73 EEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIER---KNYIHR 127
Query: 807 DIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDV 866
D++A+N+L++E K+ADFGLAR+I E + PE G T + DV
Sbjct: 128 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 187
Query: 867 YSFGVILLELVT-GKEP 882
+SFG++L E+VT GK P
Sbjct: 188 WSFGILLYEIVTYGKIP 204
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 98.9 bits (246), Expect = 6e-23
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 14/200 (7%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF 746
IG G FG V+ + + VA+K + + +F E + + K+ H LV L G C+
Sbjct: 12 IGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTE 70
Query: 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLE---VLGWDKRYKIACGAARGLAFLHHGFTPHI 803
LV+E+M +G L +LR + G +LG + G+A+L ++
Sbjct: 71 RSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLG------MCLDVCEGMAYLESS---NV 121
Query: 804 IHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTR 863
IHRD+ A N L+ E KV+DFG+ R + + ST + PE + +++
Sbjct: 122 IHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSK 181
Query: 864 GDVYSFGVILLELVT-GKEP 882
DV+SFGV++ E+ + GK P
Sbjct: 182 SDVWSFGVLMWEVFSEGKTP 201
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 98.7 bits (246), Expect = 7e-23
Identities = 80/272 (29%), Positives = 125/272 (45%), Gaps = 30/272 (11%)
Query: 685 NIIGDGGFGTVYKAALP-DGKTVAVKK--LSQAKTQGHREFTAEMETLGKVKHQNLVPLL 741
N IG G FG V+K D + A+K+ LS+ + E E L K+ ++
Sbjct: 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRY- 64
Query: 742 GYCSFDEEKLL--VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF 799
Y SF ++ L V EY NG L L+ + G L D+ ++ GLA LH
Sbjct: 65 -YESFLDKGKLNIVMEYAENGDLHKLLKMQRGR--PLPEDQVWRFFIQILLGLAHLH--- 118
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGR 859
+ I+HRDIK+ N+ L+ K+ D G+A+L+S T+ + I GT Y+ PE +
Sbjct: 119 SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD-NTNFANTIVGTPYYLSPELCEDKP 177
Query: 860 STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919
+ DV++ GV+L E TGK P F G L+ K+ +G V P
Sbjct: 178 YNEKSDVWALGVVLYECCTGKHP----FDANNQGALI----LKIIRG----VFPPV---- 221
Query: 920 DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
S+ ++ ++ CL+ + RP +L+
Sbjct: 222 -SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 99.6 bits (249), Expect = 7e-23
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 23/213 (10%)
Query: 678 TNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN 736
+ IG+G G VYKA GK VA+KK+ K E+ + KH N
Sbjct: 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIIN-EILIMKDCKHPN 76
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY----KIA--CGAA- 789
+V +E +V EYM GSL +++ + +IA C
Sbjct: 77 IVDYYDSYLVGDELWVVMEYMDGGSLT----------DIITQNFVRMNEPQIAYVCREVL 126
Query: 790 RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGY 849
+GL +LH ++IHRDIK+ NILL+++ K+ADFG A ++ ++ ++ + GT +
Sbjct: 127 QGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNS-VVGTPYW 182
Query: 850 IPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
+ PE + + D++S G++ +E+ G+ P
Sbjct: 183 MAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPP 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 98.1 bits (245), Expect = 1e-22
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
+G+G +G+VYKA G+ VA+K + + +E E+ L + +V G
Sbjct: 10 KLGEGSYGSVYKAIHKETGQVVAIKVVPV--EEDLQEIIKEISILKQCDSPYIVKYYGSY 67
Query: 745 SFDEEKLLVYEYMVNGS-LDLW-LRNRTGSLEVLGWDKRYKIAC---GAARGLAFLHHGF 799
+ + +V EY GS D+ + N+T + E +IA +GL +LH
Sbjct: 68 FKNTDLWIVMEYCGAGSVSDIMKITNKTLTEE--------EIAAILYQTLKGLEYLH--- 116
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGR 859
+ IHRDIKA NILLNEE +AK+ADFG++ ++ +T I GT ++ PE Q
Sbjct: 117 SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVI-GTPFWMAPEVIQEIG 175
Query: 860 STTRGDVYSFGVILLELVTGKEP 882
+ D++S G+ +E+ GK P
Sbjct: 176 YNNKADIWSLGITAIEMAEGKPP 198
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 97.8 bits (244), Expect = 2e-22
Identities = 66/206 (32%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLG-YC 744
IG G +G VYKA + G+ VA+K + E+ L + +H N+V G Y
Sbjct: 11 IGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSY- 69
Query: 745 SFDEEKL-LVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIA---CGAARGLAFLHHGF 799
+KL +V EY GSL D++ R G L +IA +GLA+LH
Sbjct: 70 -LRRDKLWIVMEYCGGGSLQDIYQVTR-GPLS------ELQIAYVCRETLKGLAYLHE-- 119
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQ--- 856
IHRDIK +NILL E+ + K+ADFG++ ++A + I GT ++ PE
Sbjct: 120 -TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFI-GTPYWMAPEVAAVER 177
Query: 857 SGRSTTRGDVYSFGVILLELVTGKEP 882
G + D+++ G+ +EL + P
Sbjct: 178 KGGYDGKCDIWALGITAIELAELQPP 203
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 97.8 bits (243), Expect = 3e-22
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 23/216 (10%)
Query: 687 IGDGGFGTVYKA------ALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPL 740
+G+G FG V+ A D VAVK L ++F E E L ++H+++V
Sbjct: 13 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 72
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEV------------LGWDKRYKIACGA 788
G C + ++V+EYM +G L+ +LR + LG + IA
Sbjct: 73 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 132
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH-VSTDIAGTF 847
A G+ +L + H +HRD+ N L+ K+ DFG++R + + + + V
Sbjct: 133 ASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 189
Query: 848 GYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 882
++PPE + TT DV+SFGVIL E+ T GK+P
Sbjct: 190 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 225
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 96.5 bits (240), Expect = 5e-22
Identities = 79/282 (28%), Positives = 134/282 (47%), Gaps = 35/282 (12%)
Query: 686 IIGDGGFGTVYKAAL-PDGK---TVAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPL 740
+IG G FG V + L GK VA+K L T + R+F +E +G+ H N++ L
Sbjct: 11 VIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHL 70
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT 800
G + +++ E+M NG+LD +LR G V+ + + G A G+ +L
Sbjct: 71 EGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYLSE--- 124
Query: 801 PHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYG 855
+ +HRD+ A NIL+N KV+DFGL+R + +T T + G IP PE
Sbjct: 125 MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED-DTSDPTYTSSLGGKIPIRWTAPEAI 183
Query: 856 QSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914
+ T+ DV+S+G+++ E+++ G+ P + D+ +++ + Q + D P
Sbjct: 184 AYRKFTSASDVWSYGIVMWEVMSYGERP----YWDMSNQDVINAIEQDYRLPPPMDC--P 237
Query: 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
T L +ML DC + RP ++ L ++
Sbjct: 238 TAL----HQLML-------DCWQKDRNARPKFGQIVSTLDKM 268
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 95.8 bits (239), Expect = 1e-21
Identities = 67/218 (30%), Positives = 101/218 (46%), Gaps = 26/218 (11%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQ 735
N + ++G+G +G V K G+ VA+KK +++ + TA E++ L +++H+
Sbjct: 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHE 60
Query: 736 NLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL 795
N+V L LV+EY+ L+L + G L D + +A+
Sbjct: 61 NIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGG----LPPDAVRSYIWQLLQAIAYC 116
Query: 796 H-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE- 853
H H IIHRDIK NIL++E K+ DFG AR + A TD T Y PE
Sbjct: 117 HSHN----IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPEL 172
Query: 854 ------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGP 885
YG+ DV++ G I+ EL+ G EP P
Sbjct: 173 LVGDTNYGKP------VDVWAIGCIMAELLDG-EPLFP 203
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 96.1 bits (240), Expect = 2e-21
Identities = 79/209 (37%), Positives = 105/209 (50%), Gaps = 28/209 (13%)
Query: 687 IGDGGFGTVYKAALPD---GKTVAVKKLSQA---KTQGHREFTAEM--ETLGKVKHQNLV 738
+G G +G V+KA D + VA+KK+ A T R F M + LG H N+V
Sbjct: 15 LGKGAYGIVWKAI--DRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGD--HPNIV 70
Query: 739 PLLGYCSFDEEK--LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
LL + +K LV+EYM DL R LE + KRY I + L ++H
Sbjct: 71 KLLNVIKAENDKDIYLVFEYM---ETDLHAVIRANILEDV--HKRY-IMYQLLKALKYIH 124
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA----CETHVSTDIAGTFGYIPP 852
G ++IHRD+K SNILLN + K+ADFGLAR +S E V TD T Y P
Sbjct: 125 SG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAP 181
Query: 853 EYGQSGRSTTRG-DVYSFGVILLELVTGK 880
E T+G D++S G IL E++ GK
Sbjct: 182 EILLGSTRYTKGVDMWSVGCILGEMLLGK 210
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 95.1 bits (236), Expect = 3e-21
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 687 IGDGGFGTVYKAAL------PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPL 740
+G+G FG V+ A D VAVK L A ++F E E L ++H+++V
Sbjct: 13 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 72
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEV---------LGWDKRYKIACGAARG 791
G C + ++V+EYM +G L+ +LR + L + IA A G
Sbjct: 73 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAG 132
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH-VSTDIAGTFGYI 850
+ +L + H +HRD+ N L+ E K+ DFG++R + + + + V ++
Sbjct: 133 MVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 189
Query: 851 PPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 882
PPE + TT DV+S GV+L E+ T GK+P
Sbjct: 190 PPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 222
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 95.4 bits (237), Expect = 3e-21
Identities = 74/218 (33%), Positives = 107/218 (49%), Gaps = 36/218 (16%)
Query: 685 NIIGDGGFGTVYKAAL-PDG--KTVAVKKLSQAKTQG-HREFTAEMETLGKV-KHQNLVP 739
++IG+G FG V KA + DG A+K++ + ++ HR+F E+E L K+ H N++
Sbjct: 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 72
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLR--------------NRTGSLEVLGWDKRYKIA 785
LLG C L EY +G+L +LR N T S L + A
Sbjct: 73 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS--TLSSQQLLHFA 130
Query: 786 CGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG 845
ARG+ +L IHRD+ A NIL+ E + AK+ADFGL+R E +V
Sbjct: 131 ADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK---- 180
Query: 846 TFGYIPP-----EYGQSGRSTTRGDVYSFGVILLELVT 878
T G +P E TT DV+S+GV+L E+V+
Sbjct: 181 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 218
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 94.2 bits (234), Expect = 3e-21
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 22/209 (10%)
Query: 686 IIGDGGFGTVY--KAALPDGK--TVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPL 740
+IG G FG V + LP + VA+K L T+ R +F +E +G+ H N++ L
Sbjct: 11 VIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHL 70
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH-GF 799
G + + ++V EYM NGSLD +LR G V+ + + G A G+ +L G+
Sbjct: 71 EGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVI---QLVGMLRGIASGMKYLSDMGY 127
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEY 854
+HRD+ A NIL+N KV+DFGL+R++ E G IP PE
Sbjct: 128 ----VHRDLAARNILVNSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTAPEA 180
Query: 855 GQSGRSTTRGDVYSFGVILLELVT-GKEP 882
+ T+ DV+S+G+++ E+++ G+ P
Sbjct: 181 IAYRKFTSASDVWSYGIVMWEVMSYGERP 209
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 4e-21
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 32/272 (11%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLS-QAKTQGHREFTA-EMETLGKVKHQNLVPLLGY 743
+G G +G+VYK L D + A+K++ + +Q RE E+ L V H N++ Y
Sbjct: 8 LGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNII---SY 64
Query: 744 --CSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT 800
D KL +V EY G L + R +++ + ++I RGL LH
Sbjct: 65 KEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---E 121
Query: 801 PHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRS 860
I+HRD+K++NILL K+ D G++++ + T I GT Y+ PE +
Sbjct: 122 QKILHRDLKSANILLVANDLVKIGDLGISKV--LKKNMAKTQI-GTPHYMAPEVWKGRPY 178
Query: 861 TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTAD 920
+ + D++S G +L E+ T P E + ++ + K+++G+ + P + + D
Sbjct: 179 SYKSDIWSLGCLLYEMATFAPPF--EARSMQD------LRYKVQRGKYPPI--PPIYSQD 228
Query: 921 SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952
+ +R L P +RP +L
Sbjct: 229 ----LQNFIR---SMLQVKPKLRPNCDKILAS 253
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 5e-21
Identities = 73/282 (25%), Positives = 120/282 (42%), Gaps = 30/282 (10%)
Query: 686 IIGDGGFGTVYKAALP------DGKTVAVKKLSQAKTQG-HREFTAEMETLGKVKHQNLV 738
+G G FG V+ A V VK L + K + EF E++ K+ H+N+V
Sbjct: 12 TLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVV 71
Query: 739 PLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEV-----LGWDKRYKIACGAARGLA 793
LLG C E ++ EY G L +LR E L ++ + A G+
Sbjct: 72 RLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMD 131
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE 853
L +HRD+ A N L++ + E KV+ L++ + E + + ++ PE
Sbjct: 132 HL---SNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPE 188
Query: 854 YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913
Q +T+ DV+SFGV++ E+ T E D E V +++ G+ L+
Sbjct: 189 AVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE-------VLNRLQAGK----LE 237
Query: 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955
V + P L ++ C + NP RP+ ++ L E
Sbjct: 238 LPV--PEGCPSRLY--KLMTRCWAVNPKDRPSFSELVSALGE 275
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 94.1 bits (234), Expect = 5e-21
Identities = 78/266 (29%), Positives = 126/266 (47%), Gaps = 26/266 (9%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKK-LSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
+G G G+V K +P G +A K AK+ ++ E++ + + + +V G
Sbjct: 13 LGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAF 72
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTG--SLEVLGWDKRYKIACGAARGLAFLHHGFTPH 802
+ + E+M GSLD + + G +E+LG KIA GL +L++
Sbjct: 73 LNENNICMCMEFMDCGSLDRIYK-KGGPIPVEILG-----KIAVAVVEGLTYLYN--VHR 124
Query: 803 IIHRDIKASNILLNEEFEAKVADFGLA-RLI-SACETHVSTDIAGTFGYIPPEYGQSGRS 860
I+HRDIK SNIL+N + K+ DFG++ LI S +T V GT Y+ PE Q G+
Sbjct: 125 IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFV-----GTSTYMSPERIQGGKY 179
Query: 861 TTRGDVYSFGVILLELVTGKEP-TGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919
T + DV+S G+ ++EL GK P D + +G + ++ Q P + ++
Sbjct: 180 TVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMG-ILDLLQ--QIVQEPPPRLPSS 236
Query: 920 DSKPMMLKMLRIAGDCLSDNPAMRPT 945
D + + CL +P RPT
Sbjct: 237 DFPEDLRDFVDA---CLLKDPTERPT 259
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 93.6 bits (232), Expect = 6e-21
Identities = 83/290 (28%), Positives = 132/290 (45%), Gaps = 47/290 (16%)
Query: 687 IGDGGFGTVY----KAALPDG--KTVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVP 739
+G G FG VY K + D VA+K +++A + R EF E + + ++V
Sbjct: 14 LGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 73
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRN------RTGSLEVLGWDKRYKIACGAARGLA 793
LLG S + L++ E M G L +LR+ K ++A A G+A
Sbjct: 74 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMA 133
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-- 851
+L+ +HRD+ A N ++ E+F K+ DFG+ R I + + G G +P
Sbjct: 134 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 186
Query: 852 ---PEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908
PE + G TT DV+SFGV+L E+ T E +Q M Q
Sbjct: 187 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP----------------YQGMSNEQV 230
Query: 909 AD-VLDPTVL-TADSKP-MMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955
V++ +L D+ P M+ +++R+ C NP MRP+ L ++ +KE
Sbjct: 231 LRFVMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 277
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 93.8 bits (233), Expect = 7e-21
Identities = 78/286 (27%), Positives = 133/286 (46%), Gaps = 24/286 (8%)
Query: 683 KTNIIGDGGFGTV----YKAALPD-GKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQN 736
K ++G+G FG V Y A G+ VAVK L + Q + + E+ L + H+N
Sbjct: 8 KIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHEN 67
Query: 737 LVPLLGYCSFDEEK--LLVYEYMVNGSLDLWL-RNRTGSLEVLGWDKRYKIACGAARGLA 793
+V G CS K L+ EY+ GSL +L +++ ++L + ++ G+A
Sbjct: 68 IVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQ------ICEGMA 121
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH--VSTDIAGTFGYIP 851
+LH + H IHRD+ A N+LL+ + K+ DFGLA+ + + V D +
Sbjct: 122 YLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 178
Query: 852 PEYGQSGRSTTRGDVYSFGVILLELVTGKEPT-GPEFKDIEGGNLVGWVFQKMKKGQAAD 910
E + + + DV+SFGV L EL+T + P K E ++G +M + +
Sbjct: 179 VECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEE---MIGPKQGQMTVVRLIE 235
Query: 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+L+ + K ++ + +C RPT ++ LKE+
Sbjct: 236 LLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 93.1 bits (232), Expect = 8e-21
Identities = 75/270 (27%), Positives = 124/270 (45%), Gaps = 45/270 (16%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLS-----QAKTQGHREFTAEMETLGKVKHQNLVPL 740
+G GGFG V +T A+K + + Q H +E E L + H +V L
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEH--IFSEKEILEECNHPFIVKL 58
Query: 741 LGYCSF-DEEKL-LVYEYMVNGSLDLW--LRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
Y +F D++ + ++ EY + G +LW LR+R G + + R+ IAC +LH
Sbjct: 59 --YRTFKDKKYIYMLMEYCLGG--ELWTILRDR-GLFD--EYTARFYIAC-VVLAFEYLH 110
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI-SACETHVSTDIAGTFGYIPPEYG 855
+ II+RD+K N+LL+ K+ DFG A+ + S +T GT Y+ PE
Sbjct: 111 N---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWT---FCGTPEYVAPEII 164
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEP-TGPEFKDIEGGNLVGWVFQKMKKGQAADVLD- 913
+ D +S G++L EL+TG+ P + +E ++ + KG L+
Sbjct: 165 LNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPME-------IYNDILKGN--GKLEF 215
Query: 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMR 943
P + +K ++ ++LR NP R
Sbjct: 216 PNYIDKAAKDLIKQLLR-------RNPEER 238
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 93.5 bits (233), Expect = 8e-21
Identities = 71/207 (34%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 681 FCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQNL 737
+ K IG+G +G VYKA G+ VA+KK+ TA E++ L ++ H N+
Sbjct: 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI 60
Query: 738 VPLLGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
+ LL + L LV+E+M L + G E L Y++ G LAF H
Sbjct: 61 IKLLDVF-RHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQG----LAFCH 115
Query: 797 -HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE-- 853
HG I+HRD+K N+L+N E K+ADFGLAR + T T Y PE
Sbjct: 116 SHG----ILHRDLKPENLLINTEGVLKLADFGLARSFGS-PVRPYTHYVVTRWYRAPELL 170
Query: 854 YGQSGRSTTRGDVYSFGVILLELVTGK 880
G G ST D++S G I EL++ +
Sbjct: 171 LGDKGYSTPV-DIWSVGCIFAELLSRR 196
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 92.5 bits (230), Expect = 1e-20
Identities = 66/206 (32%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 685 NIIGDGGFGTVYKAAL------PDGKTVAVKKLSQ-AKTQGHREFTAEMETLGKVKHQNL 737
+G G FG VY+ VAVK L + Q +F E + K HQN+
Sbjct: 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNI 71
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWL---RNRTGSLEVLGWDKRYKIACGAARGLAF 794
V L+G + ++ E M G L +L R R L A A+G +
Sbjct: 72 VRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKY 131
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFE---AKVADFGLARLISACETHVSTDIAG-TFGYI 850
L H IHRDI A N LL + AK+ADFG+AR I + A ++
Sbjct: 132 LE---ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWM 188
Query: 851 PPEYGQSGRSTTRGDVYSFGVILLEL 876
PPE G T++ DV+SFGV+L E+
Sbjct: 189 PPEAFLDGIFTSKTDVWSFGVLLWEI 214
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 92.6 bits (231), Expect = 1e-20
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 24/204 (11%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVK-HQNLVPLLG 742
+GDG FG+VY A G+ VA+KK+ + K E E+++L K+ H N+V L
Sbjct: 7 LGDGTFGSVYLARNKETGELVAIKKMKK-KFYSWEECMNLREVKSLRKLNEHPNIVKLKE 65
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSL----EVLGWDKRYKIACGAARGLAFLH-H 797
++E V+EYM G+L +++R G + Y+I G LA +H H
Sbjct: 66 VFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSI--IYQILQG----LAHIHKH 118
Query: 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE-YGQ 856
GF HRD+K N+L++ K+ADFGLAR I + + TD T Y PE +
Sbjct: 119 GF----FHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY--TDYVSTRWYRAPEILLR 172
Query: 857 SGRSTTRGDVYSFGVILLELVTGK 880
S ++ D+++ G I+ EL T +
Sbjct: 173 STSYSSPVDIWALGCIMAELYTLR 196
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 91.5 bits (228), Expect = 4e-20
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 39/220 (17%)
Query: 680 NFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHRE---FTA--EMETLGKVK 733
+ K +G+G + VYKA G+ VA+KK+ + + ++ FTA E++ L ++K
Sbjct: 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK 60
Query: 734 HQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA---- 789
H N++ LL LV+E+M LE + DK I A
Sbjct: 61 HPNIIGLLDVFGHKSNINLVFEFM------------ETDLEKVIKDK--SIVLTPADIKS 106
Query: 790 ------RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDI 843
RGL +LH + I+HRD+K +N+L+ + K+ADFGLAR + ++ +
Sbjct: 107 YMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQV 163
Query: 844 AGTFGYIPPE--YGQSGRSTTRG-DVYSFGVILLELVTGK 880
T Y PE +G R G D++S G I EL+
Sbjct: 164 V-TRWYRAPELLFG--ARHYGVGVDMWSVGCIFAELLLRV 200
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 90.8 bits (226), Expect = 4e-20
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 22/212 (10%)
Query: 685 NIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAK-TQGHRE-FTAEMETLGKVKHQNLVPLL 741
IG G FGTV K DGK + K++ T+ ++ +E+ L ++KH N+V
Sbjct: 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIV--- 62
Query: 742 GYCS--FDEEKLLVY---EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
Y D +Y EY G L ++ + + + ++I L H
Sbjct: 63 RYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECH 122
Query: 797 HGFTPH--IIHRDIKASNILLNEEFEAKVADFGLARLI----SACETHVSTDIAGTFGYI 850
+ P ++HRD+K +NI L+ K+ DFGLA+++ S +T+V GT Y+
Sbjct: 123 NRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYV-----GTPYYM 177
Query: 851 PPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
PE + D++S G ++ EL P
Sbjct: 178 SPEQLNHMSYDEKSDIWSLGCLIYELCALSPP 209
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 91.2 bits (226), Expect = 5e-20
Identities = 89/307 (28%), Positives = 132/307 (42%), Gaps = 57/307 (18%)
Query: 686 IIGDGGFGTVYKA------ALPDGKTVAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLV 738
+G+G FG V KA TVAVK L + + R+ +E L +V H +++
Sbjct: 7 TLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVI 66
Query: 739 PLLGYCSFDEEKLLVYEYMVNGSLDLWLR--------------NRTGSL------EVLGW 778
L G CS D LL+ EY GSL +LR NR S L
Sbjct: 67 KLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTM 126
Query: 779 DKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838
A +RG+ +L ++HRD+ A N+L+ E + K++DFGL+R + +++
Sbjct: 127 GDLISFAWQISRGMQYLAE---MKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSY 183
Query: 839 VSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEG 892
V + G IP E TT+ DV+SFGV+L E+VT G P + I
Sbjct: 184 VKR----SKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP----YPGIAP 235
Query: 893 GNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952
L F +K G + + S+ M ML C P RPT + K
Sbjct: 236 ERL----FNLLKTGYRMERPENC-----SEEMYNLMLT----CWKQEPDKRPTFADISKE 282
Query: 953 LKEIKVE 959
L+++ V+
Sbjct: 283 LEKMMVK 289
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 90.8 bits (225), Expect = 8e-20
Identities = 93/298 (31%), Positives = 135/298 (45%), Gaps = 52/298 (17%)
Query: 687 IGDGGFGTVYKAAL-------PDGKT-VAVKKL-SQAKTQGHREFTAEMETLGKV-KHQN 736
+G+G FG V A P+ T VAVK L S A + + +EME + + KH+N
Sbjct: 26 LGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 85
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNR------------TGSLEVLGWDKRYKI 784
++ LLG C+ D ++ EY G+L +LR R E L +
Sbjct: 86 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSC 145
Query: 785 ACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIA 844
A ARG+ +L + IHRD+ A N+L+ E+ K+ADFGLAR I + + T
Sbjct: 146 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT--- 199
Query: 845 GTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGW 898
T G +P PE T + DV+SFGV+L E+ T G P G V
Sbjct: 200 -TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--------PGVPVEE 250
Query: 899 VFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+F+ +K+G D P+ T + MM DC P+ RPT +++ L I
Sbjct: 251 LFKLLKEGHRMD--KPSNCTNELYMMM-------RDCWHAVPSQRPTFKQLVEDLDRI 299
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 89.6 bits (222), Expect = 9e-20
Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 14/198 (7%)
Query: 686 IIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS 745
IIG+G FG V + G+ VAVK + T + F E + K+ H+NLV LLG
Sbjct: 13 IIGEGEFGAVLQGEYT-GQKVAVKNIKCDVTA--QAFLEETAVMTKLHHKNLVRLLGVI- 68
Query: 746 FDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIH 805
+V E M G+L +LR R +L + + + + A G+ +L + ++H
Sbjct: 69 LHNGLYIVMELMSKGNLVNFLRTRGRALVSVI--QLLQFSLDVAEGMEYLE---SKKLVH 123
Query: 806 RDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGD 865
RD+ A NIL++E+ AKV+DFGLAR+ S + + T PE + + +++ D
Sbjct: 124 RDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWT----APEALKHKKFSSKSD 179
Query: 866 VYSFGVILLELVT-GKEP 882
V+S+GV+L E+ + G+ P
Sbjct: 180 VWSYGVLLWEVFSYGRAP 197
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 89.5 bits (222), Expect = 1e-19
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 8/197 (4%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF 746
+G G FG V+ VA+K +++ +F E + + K+ H LV L G C+
Sbjct: 12 LGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQ 70
Query: 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHR 806
+ +V E+M NG L +LR R G L D + G+ +L IHR
Sbjct: 71 QKPLYIVTEFMENGCLLNYLRQRQG---KLSKDMLLSMCQDVCEGMEYLERN---SFIHR 124
Query: 807 DIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDV 866
D+ A N L++ KV+DFG+ R + E S+ + PPE + +++ DV
Sbjct: 125 DLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDV 184
Query: 867 YSFGVILLELVT-GKEP 882
+SFGV++ E+ T GK P
Sbjct: 185 WSFGVLMWEVFTEGKMP 201
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 90.2 bits (224), Expect = 1e-19
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 45/287 (15%)
Query: 686 IIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQNLVPLLG 742
++G+G +G V K + G+ VA+KK +++ + A E+ L +++H+NLV L+
Sbjct: 8 LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIE 67
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH 802
+ LV+E++ + LD + G L + K RG+ F H + +
Sbjct: 68 VFRRKKRLYLVFEFVDHTVLDDLEKYPNG----LDESRVRKYLFQILRGIEFCH---SHN 120
Query: 803 IIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE-------YG 855
IIHRDIK NIL+++ K+ DFG AR ++A V TD T Y PE YG
Sbjct: 121 IIHRDIKPENILVSQSGVVKLCDFGFARTLAA-PGEVYTDYVATRWYRAPELLVGDTKYG 179
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG--------GNLV---------GW 898
++ D+++ G ++ E++TG EP P DI+ GNL+
Sbjct: 180 RA------VDIWAVGCLVTEMLTG-EPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNP 232
Query: 899 VFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT 945
+F M+ + ++ ++L + + CL +P RP+
Sbjct: 233 LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAK---QCLRIDPDDRPS 276
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 91.4 bits (227), Expect = 1e-19
Identities = 69/227 (30%), Positives = 104/227 (45%), Gaps = 40/227 (17%)
Query: 677 ATNNFC---KTNIIGDGGFGTVYKAA-LPDGKTVAVKKL-SQAKTQGHREFTAEMETLGK 731
A + + N IG G GTVYK P G+ A+K + + R+ E+E L
Sbjct: 69 AAKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRD 128
Query: 732 VKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLG---WDKRY--KIAC 786
V H N+V + E ++ E+M GSL+ G D+++ +A
Sbjct: 129 VNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLE-------------GTHIADEQFLADVAR 175
Query: 787 GAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA----CETHVSTD 842
G+A+LH HI+HRDIK SN+L+N K+ADFG++R+++ C + V
Sbjct: 176 QILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSV--- 229
Query: 843 IAGTFGYIPPE-----YGQSGRSTTRGDVYSFGVILLELVTGKEPTG 884
GT Y+ PE GD++S GV +LE G+ P G
Sbjct: 230 --GTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFG 274
|
Length = 353 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 90.5 bits (224), Expect = 1e-19
Identities = 70/216 (32%), Positives = 103/216 (47%), Gaps = 32/216 (14%)
Query: 685 NIIGDGGFGTVYKAALP-DGK--TVAVKKLSQ-AKTQGHREFTAEMETLGKV-KHQNLVP 739
++IG+G FG V +A + DG A+K L + A HR+F E+E L K+ H N++
Sbjct: 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIIN 67
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRN------------RTGSLEVLGWDKRYKIACG 787
LLG C + EY G+L +LR G+ L + + A
Sbjct: 68 LLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASD 127
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF 847
A G+ +L IHRD+ A N+L+ E +K+ADFGL+R E +V T
Sbjct: 128 VATGMQYLSE---KQFIHRDLAARNVLVGENLASKIADFGLSR---GEEVYVKK----TM 177
Query: 848 GYIPP-----EYGQSGRSTTRGDVYSFGVILLELVT 878
G +P E TT+ DV+SFGV+L E+V+
Sbjct: 178 GRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVS 213
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 89.7 bits (223), Expect = 2e-19
Identities = 72/215 (33%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQNLVPLLGY 743
IG+G G V+KA G+TVA+KK++ + +G A E++ L +H +V LL
Sbjct: 8 IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDV 67
Query: 744 CSFDEEKLLVYEYMVNGSLDLW--LRNRTGSL---EVLGWDKRYKIACGAARGLAFLHHG 798
+LV EYM + DL LR+ L +V K Y +G+A++H
Sbjct: 68 FPHGSGFVLVMEYMPS---DLSEVLRDEERPLPEAQV----KSYMRML--LKGVAYMH-- 116
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE--YGQ 856
I+HRD+K +N+L++ + K+ADFGLARL S E + + T Y PE YG
Sbjct: 117 -ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGA 175
Query: 857 SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIE 891
+ D+++ G I EL+ G P P DIE
Sbjct: 176 R-KYDPGVDLWAVGCIFAELLNGS-PLFPGENDIE 208
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 89.0 bits (220), Expect = 2e-19
Identities = 72/216 (33%), Positives = 104/216 (48%), Gaps = 32/216 (14%)
Query: 685 NIIGDGGFGTVYKAALP-DG--KTVAVKKLSQ-AKTQGHREFTAEMETLGKVKHQ-NLVP 739
++IG+G FG V KA + DG A+K++ + A HR+F E+E L K+ H N++
Sbjct: 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 60
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRN------------RTGSLEVLGWDKRYKIACG 787
LLG C L EY +G+L +LR + L + A
Sbjct: 61 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 120
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF 847
ARG+ +L IHRD+ A NIL+ E + AK+ADFGL+R E +V T
Sbjct: 121 VARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK----TM 170
Query: 848 GYIPP-----EYGQSGRSTTRGDVYSFGVILLELVT 878
G +P E TT DV+S+GV+L E+V+
Sbjct: 171 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 206
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 88.4 bits (219), Expect = 2e-19
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 8/197 (4%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF 746
+G G FG V VA+K + + + EF E + + K+ H+ LV L G C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTK 70
Query: 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHR 806
+V EYM NG L +LR + + K C G+A+L + IHR
Sbjct: 71 QRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVC---EGMAYLE---SKQFIHR 124
Query: 807 DIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDV 866
D+ A N L++++ KV+DFGL+R + E S + PPE + +++ DV
Sbjct: 125 DLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDV 184
Query: 867 YSFGVILLELVT-GKEP 882
++FGV++ E+ + GK P
Sbjct: 185 WAFGVLMWEVYSLGKMP 201
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 88.8 bits (220), Expect = 3e-19
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 20/202 (9%)
Query: 685 NIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLG 742
I+G G GTVYKA L + +AVK + T + ++ +E+E L K ++ G
Sbjct: 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYG 66
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH 802
+ + E+M GSLD++ R VLG +IA +GL +L ++
Sbjct: 67 AFFVENRISICTEFMDGGSLDVY---RKIPEHVLG-----RIAVAVVKGLTYL---WSLK 115
Query: 803 IIHRDIKASNILLNEEFEAKVADFGLARLI--SACETHVSTDIAGTFGYIPPEYGQSGRS 860
I+HRD+K SN+L+N + K+ DFG++ + S +T+V GT Y+ PE +
Sbjct: 116 ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYV-----GTNAYMAPERISGEQY 170
Query: 861 TTRGDVYSFGVILLELVTGKEP 882
DV+S G+ +EL G+ P
Sbjct: 171 GIHSDVWSLGISFMELALGRFP 192
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 89.1 bits (221), Expect = 3e-19
Identities = 68/203 (33%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 687 IGDGGFGTVYKA---ALPD--GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLL 741
+G G FG+V L D G+ VAVKKL + + R+F E+E L ++H N+V
Sbjct: 12 LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYK 71
Query: 742 GYC-SFDEEKL-LVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG 798
G C S L LV EY+ GSL D ++R E L K A +G+ +L
Sbjct: 72 GVCYSAGRRNLRLVMEYLPYGSLRDYLQKHR----ERLDHRKLLLYASQICKGMEYLG-- 125
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG---TFGYIPPEYG 855
+ +HRD+ NIL+ E K+ DFGL +++ + + G F Y P
Sbjct: 126 -SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLT 184
Query: 856 QSGRSTTRGDVYSFGVILLELVT 878
+S + + DV+SFGV+L EL T
Sbjct: 185 ES-KFSVASDVWSFGVVLYELFT 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 89.3 bits (222), Expect = 3e-19
Identities = 75/233 (32%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 680 NFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQ------GHREFTAEMETLGKV 732
F K N IG+G +G VY+A G+ VA+KK+ + RE T L +
Sbjct: 8 EFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITL----LLNL 63
Query: 733 KHQNLVPLLGYCSFD--EEKLLVYEYMVN--GSLDLWLRNRTGSL---EVLGWDKRYKIA 785
+H N+V L + LV EY SL L N +V +
Sbjct: 64 RHPNIVELKEVVVGKHLDSIFLVMEYCEQDLASL---LDNMPTPFSESQVKC------LM 114
Query: 786 CGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG 845
RGL +LH F IIHRD+K SN+LL ++ K+ADFGLAR ++ +
Sbjct: 115 LQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVV- 170
Query: 846 TFGYIPPE--YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLV 896
T Y PE G TT D+++ G IL EL+ K P P +IE +L+
Sbjct: 171 TLWYRAPELLLG-CTTYTTAIDMWAVGCILAELLAHK-PLLPGKSEIEQLDLI 221
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 89.1 bits (221), Expect = 3e-19
Identities = 72/208 (34%), Positives = 102/208 (49%), Gaps = 29/208 (13%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGH---REFTAEMETLGKVKHQNLVPLLG 742
IG G FG VY A + + VA+KK+S + Q + ++ E+ L +++H N + G
Sbjct: 23 IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKG 82
Query: 743 YCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEV----LGWDKRYKIACGAARGLAFLHH 797
C E LV EY + + D+ LEV L + I GA +GLA+LH
Sbjct: 83 -CYLREHTAWLVMEYCLGSASDI--------LEVHKKPLQEVEIAAICHGALQGLAYLH- 132
Query: 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY--- 854
+ IHRDIKA NILL E K+ADFG A L+S + V GT ++ PE
Sbjct: 133 --SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFV-----GTPYWMAPEVILA 185
Query: 855 GQSGRSTTRGDVYSFGVILLELVTGKEP 882
G+ + DV+S G+ +EL K P
Sbjct: 186 MDEGQYDGKVDVWSLGITCIELAERKPP 213
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 89.3 bits (221), Expect = 3e-19
Identities = 70/203 (34%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGH---REFTAEMETLGKVKHQNLVPLLG 742
IG G FG VY A + VAVKK+S + Q + ++ E++ L ++KH N + G
Sbjct: 29 IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKG 88
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH 802
+ LV EY + + DL ++ EV + I GA +GLA+LH + +
Sbjct: 89 CYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEV----EIAAITHGALQGLAYLH---SHN 141
Query: 803 IIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY---GQSGR 859
+IHRDIKA NILL E + K+ADFG A S + V GT ++ PE G+
Sbjct: 142 MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFV-----GTPYWMAPEVILAMDEGQ 196
Query: 860 STTRGDVYSFGVILLELVTGKEP 882
+ DV+S G+ +EL K P
Sbjct: 197 YDGKVDVWSLGITCIELAERKPP 219
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 89.1 bits (222), Expect = 5e-19
Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 684 TNIIGDGGFGTVYKAA-LPDGKTVAVKKLS---QAKTQGHREFTAEMETLGKVKHQNLVP 739
IG G +G V A G+ VA+KK+S R E++ L ++H+N++
Sbjct: 5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILR-EIKLLRHLRHENIIG 63
Query: 740 LL------GYCSFDEEKLLVYEYMVNGSLDL--WLRNRTGSLEVLGWDKRYK-IACGAAR 790
LL F++ +V E M DL +++ + L D + R
Sbjct: 64 LLDILRPPSPEDFND-VYIVTELM---ETDLHKVIKSP----QPLT-DDHIQYFLYQILR 114
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI--SACETHVSTDIAGTFG 848
GL +LH + ++IHRD+K SNIL+N + K+ DFGLAR + E T+ T
Sbjct: 115 GLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRW 171
Query: 849 YIPPE-YGQSGRSTTRGDVYSFGVILLELVTGK 880
Y PE S R T D++S G I EL+T K
Sbjct: 172 YRAPELLLSSSRYTKAIDIWSVGCIFAELLTRK 204
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 88.1 bits (218), Expect = 5e-19
Identities = 76/279 (27%), Positives = 130/279 (46%), Gaps = 48/279 (17%)
Query: 683 KTNIIGDGGFGTVYKAA-LPDGKTVAVK---KLSQAKT--QGHREFTAEMETLGKVKHQN 736
K ++G G FGTV+K +P+G ++ + K Q ++ Q +E T M +G + H
Sbjct: 11 KLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAY 70
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLE---VLGWDKRYKIACGAARGLA 793
+V LLG C +L V + GSL +R SL+ +L W A+G+
Sbjct: 71 IVRLLGICPGASLQL-VTQLSPLGSLLDHVRQHRDSLDPQRLLNW------CVQIAKGMY 123
Query: 794 FLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET-HVSTDIAGTFGYIP 851
+L H ++HR++ A NILL + ++ADFG+A L+ + + ++ ++
Sbjct: 124 YLEEHR----MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMA 179
Query: 852 PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTG----PEFKDIEGGNLVGWVFQKMKKG 906
E GR T + DV+S+GV + E+++ G EP E D+ ++KG
Sbjct: 180 LESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDL------------LEKG 227
Query: 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT 945
+ + P + T D +M+K C + +RPT
Sbjct: 228 ER--LAQPQICTIDVYMVMVK-------CWMIDENVRPT 257
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 87.0 bits (215), Expect = 6e-19
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 7/191 (3%)
Query: 686 IIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYC 744
++G G FG V+K L D VAVK + Q + +F +E L + H N+V L+G C
Sbjct: 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC 61
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHII 804
+ + +V E + G +LR + L+ + K A AA G+A+L + + I
Sbjct: 62 TQRQPIYIVMELVPGGDFLSFLRKKKDELKT---KQLVKFALDAAAGMAYLE---SKNCI 115
Query: 805 HRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRG 864
HRD+ A N L+ E K++DFG++R S + PE GR ++
Sbjct: 116 HRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSES 175
Query: 865 DVYSFGVILLE 875
DV+S+G++L E
Sbjct: 176 DVWSYGILLWE 186
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 87.2 bits (216), Expect = 7e-19
Identities = 73/223 (32%), Positives = 106/223 (47%), Gaps = 35/223 (15%)
Query: 685 NIIGDGGFGTVYKAALPD-------GKTVAVKKLSQ-AKTQGHREFTAEMETLGKVKHQN 736
N +G G FG VY+ D VAVK L + A Q +EF E + H N
Sbjct: 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPN 60
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRN----RTGSLEVLGWDKRYKIACGAARGL 792
+V LLG C +E + ++ E M G L +LR+ R G +L + I A+G
Sbjct: 61 IVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGP-PLLTLKELLDICLDVAKGC 119
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEEFEA-----KVADFGLARLISACETHVSTDIAGTF 847
+L H IHRD+ A N L++E+ K+ DFGLAR I +D
Sbjct: 120 VYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDI------YKSDYYRKE 170
Query: 848 G-------YIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 882
G ++ PE G+ TT+ DV+SFGV++ E++T G++P
Sbjct: 171 GEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP 213
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 87.9 bits (218), Expect = 7e-19
Identities = 77/218 (35%), Positives = 107/218 (49%), Gaps = 37/218 (16%)
Query: 685 NIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHRE---FTA--EMETLGKVKHQNLV 738
IG+G +G VYKA D G+ VA+KK+ + +E TA E++ L ++ H+N+V
Sbjct: 13 GQIGEGTYGQVYKARDKDTGELVALKKV---RLDNEKEGFPITAIREIKILRQLNHRNIV 69
Query: 739 PLLGYC-----SFDEEK-----LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGA 788
L + D +K LV+EYM + DL G LE
Sbjct: 70 NLKEIVTDKQDALDFKKDKGAFYLVFEYMDH---DLM-----GLLESGLVHFSEDHIKSF 121
Query: 789 AR----GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIA 844
+ GL + H + +HRDIK SNILLN + + K+ADFGLARL ++ E+ T+
Sbjct: 122 MKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKV 178
Query: 845 GTFGYIPPE--YGQSGRSTTRGDVYSFGVILLELVTGK 880
T Y PPE G+ R DV+S G IL EL T K
Sbjct: 179 ITLWYRPPELLLGEE-RYGPAIDVWSCGCILGELFTKK 215
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 88.2 bits (218), Expect = 8e-19
Identities = 71/205 (34%), Positives = 105/205 (51%), Gaps = 23/205 (11%)
Query: 687 IGDGGFGTVYKAALPDGKT---VAVKKLSQAKTQGH---REFTAEMETLGKVKHQNLVPL 740
IG G FG VY A D +T VA+KK+S + Q + ++ E++ L ++KH N +
Sbjct: 33 IGHGSFGAVYFAR--DVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEY 90
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT 800
G + LV EY + + DL ++ EV + I GA +GLA+LH +
Sbjct: 91 KGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV----EIAAITHGALQGLAYLH---S 143
Query: 801 PHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY---GQS 857
++IHRDIKA NILL E + K+ADFG A + S + V GT ++ PE
Sbjct: 144 HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFV-----GTPYWMAPEVILAMDE 198
Query: 858 GRSTTRGDVYSFGVILLELVTGKEP 882
G+ + DV+S G+ +EL K P
Sbjct: 199 GQYDGKVDVWSLGITCIELAERKPP 223
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 87.4 bits (216), Expect = 9e-19
Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 41/279 (14%)
Query: 687 IGDGGFGTVYKAAL-----PDGKTVAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPL 740
+G+ FG +YK L + VA+K L EF E + ++ H N+V L
Sbjct: 13 LGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCL 72
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEV-------------LGWDKRYKIACG 787
LG + ++ +++EY+ G L +L R+ +V L IA
Sbjct: 73 LGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQ 132
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH-VSTDIAGT 846
A G+ +L F +H+D+ A NIL+ E+ K++D GL+R I + + + V
Sbjct: 133 IAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLP 189
Query: 847 FGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKK 905
++PPE G+ ++ D++SFGV+L E+ + G +P F + E V + ++K
Sbjct: 190 IRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPY-YGFSNQE-------VIEMVRK 241
Query: 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP 944
Q L P + D P M ++ +C + P+ RP
Sbjct: 242 RQ----LLPC--SEDCPPRMYSLMT---ECWQEGPSRRP 271
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 87.2 bits (216), Expect = 9e-19
Identities = 75/293 (25%), Positives = 125/293 (42%), Gaps = 59/293 (20%)
Query: 680 NFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHRE----------FTAEMET 728
+ K +IG G +G VY A + G+ +AVK++ T R +E+ET
Sbjct: 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIET 61
Query: 729 LGKVKHQNLVPLLGYCSFDEEKLLVY----EYMVNGSLDLWLRN---------RTGSLEV 775
L + H N+V LG+ E EY+ GS+ LR R + +V
Sbjct: 62 LKDLDHLNIVQYLGF----ETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQV 117
Query: 776 LGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835
L GLA+LH + I+HRD+KA N+L++ + K++DFG+++
Sbjct: 118 L-------------EGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKKSDDI 161
Query: 836 ETHVS-TDIAGTFGYIPPEYGQSGRSTTRG--DVYSFGVILLELVTGKEPTGPEFKDIEG 892
+ + G+ ++ PE S D++S G ++LE+ G+ P E
Sbjct: 162 YDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDE------ 215
Query: 893 GNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT 945
+ +F+ K A + P ++ + P+ L L C + NP RPT
Sbjct: 216 -EAIAAMFKLGNKRSAPPI--PPDVSMNLSPVALDFLN---ACFTINPDNRPT 262
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 86.5 bits (214), Expect = 1e-18
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 683 KTNIIGDGGFGTVYKAALPDGKTVAVKKLS------QAKTQGHREFTAEMETLGKVKHQN 736
K ++G G +GTVY G+ +AVK++ A + + + E++ L +KH N
Sbjct: 4 KGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVN 63
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
+V LG C D + E++ GS+ L NR G L + K K G+A+LH
Sbjct: 64 IVQYLGTCLDDNTISIFMEFVPGGSISSIL-NRFGPLPEPVFCKYTK---QILDGVAYLH 119
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS-----TDIAGTFGYIP 851
+ ++HRDIK +N++L K+ DFG AR ++ H + + GT ++
Sbjct: 120 NN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMA 176
Query: 852 PEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
PE + D++S G + E+ TGK P
Sbjct: 177 PEVINESGYGRKSDIWSIGCTVFEMATGKPP 207
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 87.0 bits (215), Expect = 2e-18
Identities = 91/302 (30%), Positives = 134/302 (44%), Gaps = 60/302 (19%)
Query: 687 IGDGGFGTVYKAAL--------PDGKTVAVKKLSQAKTQGH-REFTAEMETLGKV-KHQN 736
+G+G FG V A + TVAVK L T+ + +EME + + KH+N
Sbjct: 23 LGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 82
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIA----------- 785
++ LLG C+ D ++ EY G+L +LR R G + Y IA
Sbjct: 83 IINLLGACTQDGPLYVIVEYASKGNLREYLRAR----RPPGMEYSYDIARVPDEQMTFKD 138
Query: 786 ---CG--AARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS 840
C ARG+ +L + IHRD+ A N+L+ E K+ADFGLAR ++ + +
Sbjct: 139 LVSCTYQVARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKK 195
Query: 841 TDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGN 894
T T G +P PE T + DV+SFGV++ E+ T G P G
Sbjct: 196 T----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY--------PGI 243
Query: 895 LVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954
V +F+ +K+G D P T + MM DC P+ RPT +++ L
Sbjct: 244 PVEELFKLLKEGHRMD--KPANCTNELYMMM-------RDCWHAIPSHRPTFKQLVEDLD 294
Query: 955 EI 956
I
Sbjct: 295 RI 296
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 87.4 bits (216), Expect = 2e-18
Identities = 66/222 (29%), Positives = 110/222 (49%), Gaps = 22/222 (9%)
Query: 672 VHILEATNNFCKTNIIGDGGFGTVYKAA-LPDGKT----VAVKKLSQAKT-QGHREFTAE 725
+ IL+ T F K ++G G FGTVYK +P+G+ VA+K+L +A + + ++E E
Sbjct: 1 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 59
Query: 726 METLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLR---NRTGSLEVLGWDKRY 782
+ V + ++ LLG C L+ + M G L ++R + GS +L W
Sbjct: 60 AYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW---- 114
Query: 783 KIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD 842
A+G+ +L ++HRD+ A N+L+ K+ DFGLA+L+ A E +
Sbjct: 115 --CVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAE 169
Query: 843 IAGT-FGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 882
++ E T + DV+S+GV + EL+T G +P
Sbjct: 170 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 211
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 85.9 bits (213), Expect = 2e-18
Identities = 78/289 (26%), Positives = 129/289 (44%), Gaps = 34/289 (11%)
Query: 678 TNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKK-----LSQAKTQGHREFTAEMETLGK 731
NF IG G F VYKA L DG+ VA+KK + AK + ++ E++ L +
Sbjct: 1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKAR--QDCLKEIDLLKQ 58
Query: 732 VKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRN--RTGSL--EVLGWDKRYKIACG 787
+ H N++ L + E +V E G L +++ + L E W ++
Sbjct: 59 LDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLC-- 116
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF 847
L +H + I+HRDIK +N+ + K+ D GL R S+ +T + + GT
Sbjct: 117 --SALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS-KTTAAHSLVGTP 170
Query: 848 GYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907
Y+ PE + D++S G +L E+ + P F + NL + +K++K
Sbjct: 171 YYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP----FYG-DKMNLYS-LCKKIEKC- 223
Query: 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
D L AD L+ L C++ +P RP + +VL+ KE+
Sbjct: 224 -----DYPPLPADHYSEELRDL--VSRCINPDPEKRPDISYVLQVAKEM 265
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 86.3 bits (214), Expect = 2e-18
Identities = 76/273 (27%), Positives = 124/273 (45%), Gaps = 32/273 (11%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQNLVPLLGYCS 745
+GDG FG VYKA + A K+ Q +++ E F E++ L + KH N+V L
Sbjct: 13 LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF 72
Query: 746 FDEEKLLVYEYMVNGSLDLWLRNRTGSLE-VLGWDKRYKIACGAARGLAFLHHGFTPHII 804
++ + ++ E+ G+LD + LE L + + L FLH +I
Sbjct: 73 YENKLWILIEFCDGGALD----SIMLELERGLTEPQIRYVCRQMLEALNFLHSHK---VI 125
Query: 805 HRDIKASNILLNEEFEAKVADFGL-ARLISACETHVSTDIAGTFGYIPPEY--GQSGRST 861
HRD+KA NILL + + K+ADFG+ A+ S + T I GT ++ PE ++ +
Sbjct: 126 HRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR-DTFI-GTPYWMAPEVVACETFKDN 183
Query: 862 ---TRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918
+ D++S G+ L+EL EP E + V K+ K + + P+ +
Sbjct: 184 PYDYKADIWSLGITLIELAQ-MEPPHHELNPMR-------VLLKILKSEPPTLDQPSKWS 235
Query: 919 ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+ + CL +P RPT +LK
Sbjct: 236 SSFNDFLKS-------CLVKDPDDRPTAAELLK 261
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 85.4 bits (211), Expect = 3e-18
Identities = 81/282 (28%), Positives = 131/282 (46%), Gaps = 39/282 (13%)
Query: 680 NFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTAEMET--LGKVKHQN 736
+ IG+G FG +Y A A D + +K++ K + ++ E L K+KH N
Sbjct: 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPN 60
Query: 737 LVPLLGYCSFDEEKLL--VYEYMVNGSLDLWLRNRTGSL----EVLGWDKRYKIACGAAR 790
+V + SF E L V EY G L + + G L ++L W +I+ G
Sbjct: 61 IVTF--FASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSW--FVQISLG--- 113
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEE-FEAKVADFGLARLISACETHVSTDIAGTFGY 849
L H I+HRDIK+ NI L++ AK+ DFG+AR ++ ++ GT Y
Sbjct: 114 ----LKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND-SMELAYTCVGTPYY 168
Query: 850 IPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909
+ PE Q+ + D++S G +L EL T K P EG NL V K+ +G A
Sbjct: 169 LSPEICQNRPYNNKTDIWSLGCVLYELCTLKHP-------FEGNNLHQLVL-KICQGYFA 220
Query: 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+ P + D + ++ ++ +++ P RP++ +LK
Sbjct: 221 PI-SPN-FSRDLRSLISQLFKVS-------PRDRPSITSILK 253
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 86.2 bits (213), Expect = 3e-18
Identities = 79/291 (27%), Positives = 126/291 (43%), Gaps = 49/291 (16%)
Query: 687 IGDGGFGTVYKAALPD------GKTVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVP 739
+G G FG VY+ D VAVK ++++ + R EF E + ++V
Sbjct: 14 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 73
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLR-------NRTGSLEVLGWDKRYKIACGAARGL 792
LLG S + L+V E M +G L +LR N G + ++A A G+
Sbjct: 74 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT-LQEMIQMAAEIADGM 132
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP- 851
A+L+ +HRD+ A N ++ +F K+ DFG+ R I + + G G +P
Sbjct: 133 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPV 185
Query: 852 ----PEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907
PE + G TT D++SFGV+L E+ + E +Q + Q
Sbjct: 186 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----------------YQGLSNEQ 229
Query: 908 AAD-VLDPTVLT--ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955
V+D L + + ++R+ C NP MRPT L ++ LK+
Sbjct: 230 VLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 277
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 85.8 bits (213), Expect = 3e-18
Identities = 67/205 (32%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 685 NIIGDGGFGTVYKAA-LPDGKTVAVKKLS-QAKTQGHREFTA-EMETLGKVK---HQNLV 738
IG+G +GTVYKA L G+ VA+KK+ +G T E+ L +++ H N+V
Sbjct: 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIV 64
Query: 739 PLLGYCSF--DEEKL---LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLA 793
LL C + +L LV+E+ V+ L +L L + + RG+
Sbjct: 65 RLLDVCHGPRTDRELKLTLVFEH-VDQDLATYLSKCPKP--GLPPETIKDLMRQLLRGVD 121
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE 853
FLH + I+HRD+K NIL+ + + K+ADFGLAR+ S T + T Y PE
Sbjct: 122 FLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS--FEMALTSVVVTLWYRAPE 176
Query: 854 --YGQSGRSTTRGDVYSFGVILLEL 876
S + D++S G I EL
Sbjct: 177 VLLQSSYATPV--DMWSVGCIFAEL 199
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 85.1 bits (210), Expect = 4e-18
Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 12/205 (5%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF 746
+G G FG V+ A VAVK + + + F AE + ++H LV L +
Sbjct: 14 LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT- 71
Query: 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHR 806
E ++ E+M GSL +L++ GS + L K + A G+AF+ + IHR
Sbjct: 72 KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQ---RNYIHR 126
Query: 807 DIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDV 866
D++A+NIL++ K+ADFGLAR+I E + PE G T + DV
Sbjct: 127 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 186
Query: 867 YSFGVILLELVT-GKEP----TGPE 886
+SFG++L+E+VT G+ P + PE
Sbjct: 187 WSFGILLMEIVTYGRIPYPGMSNPE 211
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 85.3 bits (211), Expect = 4e-18
Identities = 74/286 (25%), Positives = 130/286 (45%), Gaps = 37/286 (12%)
Query: 680 NFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAK-TQGHREFTA-----EMETLGKV 732
+ K +G G F + Y+A + G +AVK+++ + T +E E+ + ++
Sbjct: 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL 60
Query: 733 KHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGL 792
H +++ +LG D L E+M GS+ L E + + ++ RGL
Sbjct: 61 NHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLL----RGL 116
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEEFE-AKVADFGLARLISACET---HVSTDIAGTFG 848
++LH IIHRD+K +N+L++ + ++ADFG A ++A T + GT
Sbjct: 117 SYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIA 173
Query: 849 YIPPEY--GQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK 905
++ PE G+ GRS DV+S G +++E+ T K P E + N + +F+
Sbjct: 174 FMAPEVLRGEQYGRSC---DVWSVGCVIIEMATAKPPWNAE----KHSNHLALIFKIASA 226
Query: 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
A + P L+ + + L+ CL P RP +LK
Sbjct: 227 TTAPSI--PEHLSPGLRDVTLR-------CLELQPEDRPPSRELLK 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 85.5 bits (211), Expect = 4e-18
Identities = 79/269 (29%), Positives = 127/269 (47%), Gaps = 41/269 (15%)
Query: 683 KTNIIGDGGFGTVYKAA-LPDGKT----VAVKKLSQAKT-QGHREFTAEMETLGKVKHQN 736
K ++G G FGTVYK +PDG+ VA+K L + + + ++E E + V
Sbjct: 11 KVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPY 70
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLR---NRTGSLEVLGWDKRYKIACGAARGLA 793
+ LLG C LV + M G L ++R +R GS ++L W A+G++
Sbjct: 71 VCRLLGIC-LTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNW------CVQIAKGMS 123
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE 853
+L ++HRD+ A N+L+ K+ DFGLARL+ ET D G +P +
Sbjct: 124 YLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHAD----GGKVPIK 176
Query: 854 YGQ-----SGRSTTRGDVYSFGVILLELVT-GKEP-TGPEFKDIEGGNLVGWVFQKMKKG 906
+ R T + DV+S+GV + EL+T G +P G ++I ++KG
Sbjct: 177 WMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIP---------DLLEKG 227
Query: 907 QAADVLDPTVLTADSKPMMLKMLRIAGDC 935
+ + P + T D +M+K I +C
Sbjct: 228 ER--LPQPPICTIDVYMIMVKCWMIDSEC 254
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 84.5 bits (209), Expect = 5e-18
Identities = 76/283 (26%), Positives = 132/283 (46%), Gaps = 44/283 (15%)
Query: 680 NFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQN 736
+ K ++G G FG V+ D K V +K++ + A E + L + H N
Sbjct: 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPN 60
Query: 737 LVPLLGYCSFDEEKLL--VYEYMVNGSLDLWLRNRTGSL----EVLGWDKRYKIACGAAR 790
++ Y +F E+K L V EY G+L +++ R SL +L + + +A
Sbjct: 61 IIEY--YENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLA----- 113
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNE-EFEAKVADFGLARLISACETHVSTDIAGTFGY 849
LHH T I+HRD+K NILL++ + K+ DFG+++++S+ ++ T + GT Y
Sbjct: 114 ----LHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS-KSKAYT-VVGTPCY 167
Query: 850 IPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA- 908
I PE + + D+++ G +L EL + K + E NL V + M A
Sbjct: 168 ISPELCEGKPYNQKSDIWALGCVLYELASLK-------RAFEAANLPALVLKIMSGTFAP 220
Query: 909 -ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVL 950
+D P D + ++L ML + +P+ RP + ++
Sbjct: 221 ISDRYSP-----DLRQLILSMLNL-------DPSKRPQLSQIM 251
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 84.6 bits (210), Expect = 6e-18
Identities = 67/214 (31%), Positives = 96/214 (44%), Gaps = 32/214 (14%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFT---AEMETLGKVKHQNLVPLLG 742
I G +G V+ A G A+K + +A + E + L + + +V L
Sbjct: 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKL-- 58
Query: 743 YCSFDEEK--LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH-HGF 799
Y SF +K LV EY+ G L L N GSL+ + Y IA L +LH +G
Sbjct: 59 YYSFQGKKNLYLVMEYLPGGDLASLLEN-VGSLDE-DVARIY-IA-EIVLALEYLHSNG- 113
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARL--------ISACETHVSTDIAGTFGYIP 851
IIHRD+K NIL++ K+ DFGL+++ ++ E I GT YI
Sbjct: 114 ---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE-DKRIVGTPDYIA 169
Query: 852 PEY--GQS-GRSTTRGDVYSFGVILLELVTGKEP 882
PE GQ ++ D +S G IL E + G P
Sbjct: 170 PEVILGQGHSKTV---DWWSLGCILYEFLVGIPP 200
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 85.8 bits (212), Expect = 6e-18
Identities = 90/297 (30%), Positives = 136/297 (45%), Gaps = 50/297 (16%)
Query: 687 IGDGGFGTVYKA-ALPDGK-------TVAVKKLSQAKT-QGHREFTAEMETLGKV-KHQN 736
+G+G FG V A A+ K TVAVK L T + + +EME + + KH+N
Sbjct: 20 LGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKN 79
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNR----------TGSL--EVLGWDKRYKI 784
++ LLG C+ D ++ EY G+L +LR R T L E L +
Sbjct: 80 IINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSC 139
Query: 785 ACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIA 844
A ARG+ +L + IHRD+ A N+L+ E+ K+ADFGLAR + + + T
Sbjct: 140 AYQVARGMEYLA---SQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKT--- 193
Query: 845 GTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWV 899
T G +P PE T + DV+SFGV+L E+ T G + I V +
Sbjct: 194 -TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT---LGGSPYPGIP----VEEL 245
Query: 900 FQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
F+ +K+G D P T + + I +C P+ RPT +++ L +
Sbjct: 246 FKLLKEGHRMD--KPANCTHE-------LYMIMRECWHAVPSQRPTFKQLVEDLDRV 293
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 84.5 bits (209), Expect = 7e-18
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 29/219 (13%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLS--QAKTQGHREFTA---EMETLGKV 732
N+ + ++G G FG VY D G+ +AVK++ + +E A E++ L +
Sbjct: 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL 61
Query: 733 KHQNLVPLLGYCSFDEEKLLVY-EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARG 791
+H+ +V G C D+E L ++ EYM GS+ L+ E + +I G
Sbjct: 62 QHERIVQYYG-CLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQIL----EG 116
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA--CETHVSTDIAGTFGY 849
+ +LH + I+HRDIK +NIL + K+ DFG ++ + + GT +
Sbjct: 117 VEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYW 173
Query: 850 IPPE------YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
+ PE YG+ + DV+S G ++E++T K P
Sbjct: 174 MSPEVISGEGYGR------KADVWSVGCTVVEMLTEKPP 206
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 84.7 bits (210), Expect = 7e-18
Identities = 72/228 (31%), Positives = 106/228 (46%), Gaps = 44/228 (19%)
Query: 683 KTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQNLVP 739
K + +G+G + TVYK + G+ VA+K++ +G FTA E L +KH N+V
Sbjct: 9 KLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG-APFTAIREASLLKDLKHANIVT 67
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA---------- 789
L + LV+EY+ DL K+Y CG
Sbjct: 68 LHDIIHTKKTLTLVFEYLDT---DL---------------KQYMDDCGGGLSMHNVRLFL 109
Query: 790 ----RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG 845
RGLA+ H ++HRD+K N+L++E E K+ADFGLAR S S ++
Sbjct: 110 FQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVV- 165
Query: 846 TFGYIPPE--YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIE 891
T Y PP+ G + ST+ D++ G I E+ TG+ P P D+E
Sbjct: 166 TLWYRPPDVLLGSTEYSTSL-DMWGVGCIFYEMATGR-PLFPGSTDVE 211
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 85.1 bits (210), Expect = 8e-18
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGH---REFTAEMETLGKVKHQNLVPLLG 742
IG G FG VY A + + + VA+KK+S + Q + ++ E+ L K++H N + G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH 802
+ LV EY + + DL ++ EV + + GA +GLA+LH + +
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV----EIAAVTHGALQGLAYLH---SHN 135
Query: 803 IIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY---GQSGR 859
+IHRD+KA NILL+E K+ DFG A +++ V GT ++ PE G+
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMDEGQ 190
Query: 860 STTRGDVYSFGVILLELVTGKEP 882
+ DV+S G+ +EL K P
Sbjct: 191 YDGKVDVWSLGITCIELAERKPP 213
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 83.7 bits (207), Expect = 1e-17
Identities = 78/279 (27%), Positives = 124/279 (44%), Gaps = 42/279 (15%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
++G G +G VY A L +A+K++ + ++ + E+ +KH+N+V LG
Sbjct: 15 VLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSD 74
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAAR---GLAFLHHGFTP 801
S + + E + GSL LR++ G L+ D I + GL +LH
Sbjct: 75 SENGFFKIFMEQVPGGSLSALLRSKWGPLK----DNEQTIIFYTKQILEGLKYLHDN--- 127
Query: 802 HIIHRDIKASNILLNE-EFEAKVADFG----LARLISACETHVSTDIAGTFGYIPPE--- 853
I+HRDIK N+L+N K++DFG LA + ET GT Y+ PE
Sbjct: 128 QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTET-----FTGTLQYMAPEVID 182
Query: 854 YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913
G G D++S G ++E+ TGK P IE G +F K G +
Sbjct: 183 KGPRGYGAP-ADIWSLGCTIVEMATGKPPF------IELGEPQAAMF---KVGMFKIHPE 232
Query: 914 -PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
P L+A++K +L+ C +P R + +L+
Sbjct: 233 IPESLSAEAKNFILR-------CFEPDPDKRASAHDLLQ 264
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 83.8 bits (208), Expect = 1e-17
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 681 FCKTNIIGDGGFGTVYKAA-LPDGKTVAVKK--LSQAKTQGHREFTAEMETLGKVKHQNL 737
F IG G FG VYKA + VA+K L +A+ + + E++ L + + +
Sbjct: 3 FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDE-IEDIQQEIQFLSQCRSPYI 61
Query: 738 VPLLGYCSF-DEEKL-LVYEYMVNGS-LDLWLRNRTGSLEVLGWDKRYKIAC---GAARG 791
G SF KL ++ EY GS LDL L+ D+ Y IA G
Sbjct: 62 TKYYG--SFLKGSKLWIIMEYCGGGSCLDL--------LKPGKLDETY-IAFILREVLLG 110
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
L +LH IHRDIKA+NILL+EE + K+ADFG++ +++ + +T GT ++
Sbjct: 111 LEYLHEEGK---IHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT-FVGTPFWMA 166
Query: 852 PEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
PE + + D++S G+ +EL G+ P
Sbjct: 167 PEVIKQSGYDEKADIWSLGITAIELAKGEPP 197
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 83.3 bits (206), Expect = 2e-17
Identities = 77/290 (26%), Positives = 126/290 (43%), Gaps = 42/290 (14%)
Query: 686 IIGDGGFGTVYKAAL--PDGKT--VAVKKLSQAKTQGH-----REFTAEMETLGKVKHQN 736
I+G+G FG+V + L DG VAVK + K H EF +E + H N
Sbjct: 6 ILGEGEFGSVMEGQLSQDDGSQLKVAVKTM---KLDIHTYSEIEEFLSEAACMKDFDHPN 62
Query: 737 LVPLLGYCSFDEEK------LLVYEYMVNGSLDLWL-RNRTGSL-EVLGWDKRYKIACGA 788
++ L+G C +++ +M +G L +L +R G L E L K
Sbjct: 63 VMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDI 122
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGT-F 847
A G+ +L + IHRD+ A N +L E+ VADFGL++ I + + + IA
Sbjct: 123 ALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPV 179
Query: 848 GYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKG 906
+I E T++ DV++FGV + E+ T G+ P + +E + ++ +
Sbjct: 180 KWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTP----YPGVENHEIYDYLRHGNRLK 235
Query: 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
Q D LD ++ + C +P RPT + + L+ I
Sbjct: 236 QPEDCLD-------------ELYDLMYSCWRADPKDRPTFTKLREVLENI 272
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 82.8 bits (205), Expect = 2e-17
Identities = 65/206 (31%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 687 IGDGGFGTVYKAAL--PDGKT--VAVKKLSQAKTQG-HREFTAEMETLGKVKHQNLVPLL 741
+GDG FG V + GK VAVK L K +F E + + H+NL+ L
Sbjct: 3 LGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLY 62
Query: 742 GYCSFDEEKLLVYEYMVNGSLDLWLR-NRTGSLEV-LGWDKRYKIACGAARGLAFLHHGF 799
G ++V E GSL LR + G + D +IA G + +L
Sbjct: 63 GVV-LTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANG----MRYLE--- 114
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH--VSTDIAGTFGYIPPEYGQS 857
+ IHRD+ A NILL + + K+ DFGL R + E H + + F + PE ++
Sbjct: 115 SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRT 174
Query: 858 GRSTTRGDVYSFGVILLELVT-GKEP 882
+ DV+ FGV L E+ T G+EP
Sbjct: 175 RTFSHASDVWMFGVTLWEMFTYGEEP 200
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 83.7 bits (207), Expect = 2e-17
Identities = 85/289 (29%), Positives = 126/289 (43%), Gaps = 35/289 (12%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKT-----VAVKKLSQAKTQGHRE-FTAE---MET 728
NN +G G FG V +A A K+ VAVK L RE +E M
Sbjct: 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSH 94
Query: 729 LGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGA 788
LG H+N+V LLG C+ L++ EY G L +LR + S L + +
Sbjct: 95 LGN--HENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESF--LTLEDLLSFSYQV 150
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG-TF 847
A+G+AFL + + IHRD+ A N+LL K+ DFGLAR I +V A
Sbjct: 151 AKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPV 207
Query: 848 GYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKG 906
++ PE + T DV+S+G++L E+ + G P P G V F K+ K
Sbjct: 208 KWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPY-P-------GMPVDSKFYKLIK- 258
Query: 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955
+ + P A+ +M C +P RPT +++ + +
Sbjct: 259 EGYRMAQPEHAPAEIYDIMKT-------CWDADPLKRPTFKQIVQLIGK 300
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 83.6 bits (206), Expect = 3e-17
Identities = 76/264 (28%), Positives = 125/264 (47%), Gaps = 33/264 (12%)
Query: 683 KTNIIGDGGFGTVYKAA-LPDGKTV----AVKKLSQAK-TQGHREFTAEMETLGKVKHQN 736
+ ++G G FGTVYK +P+G+TV A+K L++ + + EF E + + H +
Sbjct: 11 RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPH 70
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWL---RNRTGSLEVLGWDKRYKIACGAARGLA 793
LV LLG C LV + M +G L ++ ++ GS +L W A+G+
Sbjct: 71 LVRLLGVC-LSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNW------CVQIAKGMM 123
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGT-FGYIPP 852
+L ++HRD+ A N+L+ K+ DFGLARL+ E + D ++
Sbjct: 124 YLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 180
Query: 853 EYGQSGRSTTRGDVYSFGVILLELVT--GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910
E + T + DV+S+GV + EL+T GK G ++I ++KG+
Sbjct: 181 ECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIP---------DLLEKGER-- 229
Query: 911 VLDPTVLTADSKPMMLKMLRIAGD 934
+ P + T D +M+K I D
Sbjct: 230 LPQPPICTIDVYMVMVKCWMIDAD 253
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 82.7 bits (205), Expect = 3e-17
Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 32/227 (14%)
Query: 676 EATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKV-K 733
+ T F +IG+G +G VYKA G+ VA+K + + + E E L K
Sbjct: 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDE-EEEIKEEYNILRKYSN 61
Query: 734 HQNLVPLLGYCSF-------DEEKL-LVYEYMVNGSL-DL--WLRNRTGSL--EVLGWDK 780
H N+ G +F ++++L LV E GS+ DL LR + L E + +
Sbjct: 62 HPNIATFYG--AFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAY-- 117
Query: 781 RYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS 840
I RGLA+LH +IHRDIK NILL + E K+ DFG++ + + +
Sbjct: 118 ---ILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRN 171
Query: 841 TDIAGTFGYIPPEY---GQSGRST--TRGDVYSFGVILLELVTGKEP 882
T I GT ++ PE + ++ R DV+S G+ +EL GK P
Sbjct: 172 TFI-GTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPP 217
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 83.2 bits (205), Expect = 3e-17
Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 38/282 (13%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQNLVPLLGYCS 745
+GDG FG VYKA + +A K+ + K++ E + E+E L H +V LLG
Sbjct: 20 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY 79
Query: 746 FDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA-RGLAFLHHGFTPHII 804
+D + ++ E+ G++D + L + + ++ C L +LH + II
Sbjct: 80 WDGKLWIMIEFCPGGAVDAIMLELDRGLT----EPQIQVICRQMLEALQYLH---SMKII 132
Query: 805 HRDIKASNILLNEEFEAKVADFGL-ARLISACETHVSTDIAGTFGYIPPE--YGQSGRST 861
HRD+KA N+LL + + K+ADFG+ A+ + + S GT ++ PE ++ + T
Sbjct: 133 HRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDS--FIGTPYWMAPEVVMCETMKDT 190
Query: 862 T---RGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918
+ D++S G+ L+E+ EP E + V K+ K +P L+
Sbjct: 191 PYDYKADIWSLGITLIEMAQ-IEPPHHELNPMR-------VLLKIAKS------EPPTLS 236
Query: 919 ADSK--PMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKEI 956
SK L+ A L +P RP+ +L+ F+ +
Sbjct: 237 QPSKWSMEFRDFLKTA---LDKHPETRPSAAQLLEHPFVSSV 275
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 82.9 bits (205), Expect = 3e-17
Identities = 68/206 (33%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 680 NFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLS-QAKTQGHREFTA--EMETLGKVKHQ 735
NF K IG+G +G VYKA G+ VA+KK+ +T+G TA E+ L ++ H
Sbjct: 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-TAIREISLLKELNHP 59
Query: 736 NLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL 795
N+V LL + + LV+E++ + L ++ S L K Y +GLAF
Sbjct: 60 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASPLSGIPLPLIKSYLFQL--LQGLAFC 116
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG 855
H + ++HRD+K N+L+N E K+ADFGLAR + ++ T Y PE
Sbjct: 117 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 172
Query: 856 QSGR-STTRGDVYSFGVILLELVTGK 880
+ +T D++S G I E+VT +
Sbjct: 173 LGCKYYSTAVDIWSLGCIFAEMVTRR 198
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 83.5 bits (207), Expect = 4e-17
Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 29/211 (13%)
Query: 685 NIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFT-AEMETLGKVKHQNLVPLL- 741
+ IG+G +G V A P G VA+KK+S + Q + T E++ L + KH+N++ +L
Sbjct: 11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILD 70
Query: 742 -----GYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDK----RYKIACGAARGL 792
+ SF + +V E M DL+ +T + L D Y+I RGL
Sbjct: 71 IIRPPSFESF-NDVYIVQELM---ETDLYKLIKT---QHLSNDHIQYFLYQIL----RGL 119
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS--TDIAGTFGYI 850
++H + +++HRD+K SN+LLN + K+ DFGLAR+ H T+ T Y
Sbjct: 120 KYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYR 176
Query: 851 PPEYGQSGRSTTRG-DVYSFGVILLELVTGK 880
PE + + T+ D++S G IL E+++ +
Sbjct: 177 APEIMLNSKGYTKAIDIWSVGCILAEMLSNR 207
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 83.5 bits (207), Expect = 4e-17
Identities = 66/210 (31%), Positives = 94/210 (44%), Gaps = 35/210 (16%)
Query: 687 IGDGGFGTVYKAALPDGKT-VAVKKLS---QAKTQGHREFTAEMETLGKVKHQNLVPLLG 742
+G G +G V A VA+KKLS Q+ R + E+ L + H+N++ LL
Sbjct: 23 VGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYR-ELRLLKHMDHENVIGLLD 81
Query: 743 YCSFDEEKLLVYE-YMVNGSLDLWLRNRTGSLEVLGWDK----RYKIACGAARGLAFLHH 797
+ + Y+V + L N + L D Y+I RGL ++H
Sbjct: 82 VFTPASSLEDFQDVYLVTHLMGADL-NNIVKCQKLSDDHIQFLVYQIL----RGLKYIH- 135
Query: 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE---- 853
+ IIHRD+K SNI +NE+ E K+ DFGLAR T T Y PE
Sbjct: 136 --SAGIIHRDLKPSNIAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 189
Query: 854 ---YGQSGRSTTRGDVYSFGVILLELVTGK 880
Y Q+ D++S G I+ EL+TGK
Sbjct: 190 WMHYNQT------VDIWSVGCIMAELLTGK 213
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 83.1 bits (205), Expect = 4e-17
Identities = 84/298 (28%), Positives = 136/298 (45%), Gaps = 52/298 (17%)
Query: 687 IGDGGFGTVYKA-------ALPD-GKTVAVKKLS-QAKTQGHREFTAEMETLGKV-KHQN 736
+G+G FG V +A + PD TVAVK L A + + +EME + + KH+N
Sbjct: 20 LGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKN 79
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNR------------TGSLEVLGWDKRYKI 784
++ LLG C+ + ++ EY G+L +LR R E L +
Sbjct: 80 IINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSC 139
Query: 785 ACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIA 844
A ARG+ +L + IHRD+ A N+L+ E+ K+ADFGLAR + + + T
Sbjct: 140 AYQVARGMEYLE---SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKT--- 193
Query: 845 GTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGW 898
+ G +P PE T + DV+SFG+++ E+ T G P G V
Sbjct: 194 -SNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPY--------PGIPVEE 244
Query: 899 VFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+F+ +++G D P+ T + +M +C P RPT +++ L ++
Sbjct: 245 LFKLLREGHRMD--KPSNCTHELYMLMR-------ECWHAVPTQRPTFKQLVEALDKV 293
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 83.2 bits (205), Expect = 5e-17
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLS--QAKTQGHREFTAEMETLGKVKHQN 736
++F + + +G G G V K + +KL + K + E++ L +
Sbjct: 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 64
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRN-RTGSLEVLGWDKRYKIACGAARGLAFL 795
+V G D E + E+M GSLD L+ + E+LG K++ RGLA+L
Sbjct: 65 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-----KVSIAVLRGLAYL 119
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA-RLISACETHVSTDIAGTFGYIPPEY 854
I+HRD+K SNIL+N E K+ DFG++ +LI + ++ GT Y+ PE
Sbjct: 120 REKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPER 173
Query: 855 GQSGRSTTRGDVYSFGVILLELVTGKEPT-GPEFKDIEG 892
Q + + D++S G+ L+EL G+ P P+ K++E
Sbjct: 174 LQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEA 212
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 81.3 bits (201), Expect = 6e-17
Identities = 67/283 (23%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 680 NFCKTNIIGDGGFG--TVYKAALPDGKTVAVKK--LSQAKTQGHREFTAEMETLGKVKHQ 735
++ ++G G FG T+Y+ D V K+ L++ + R+ E+ L ++H
Sbjct: 1 HYIPIRVLGKGAFGEATLYRRT-EDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHP 59
Query: 736 NLVPLLGYCSFDEEKLLV--YEYMVNGSLDLWLRNRTGSL---EVLGWDKRYKIACGAAR 790
N++ F ++ L+ EY G+L + + G L E++ W Y +A
Sbjct: 60 NIIAYYN--HFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLW---YLFQIVSA- 113
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYI 850
++++H I+HRDIK NI L + K+ DFG+++++ + E ++ + GT Y+
Sbjct: 114 -VSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGS-EYSMAETVVGTPYYM 168
Query: 851 PPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910
PE Q + + D+++ G +L EL+T K + + N + V K+ +G
Sbjct: 169 SPELCQGVKYNFKSDIWALGCVLYELLTLK-------RTFDATNPLNLVV-KIVQGNYTP 220
Query: 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953
V+ +++ + L +P RPT VL
Sbjct: 221 VVS---------VYSSELISLVHSLLQQDPEKRPTADEVLDQP 254
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 84.5 bits (209), Expect = 9e-17
Identities = 42/93 (45%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 319 VVDLL-LNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQL 377
+D L L+N L G IP +S+L +L +++LS N + G IP G L+ L L N
Sbjct: 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSF 478
Query: 378 TGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFG 410
GSIP SLG L L LNL GN LSG+VP + G
Sbjct: 479 NGSIPESLGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 81.5 bits (201), Expect = 1e-16
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 15/224 (6%)
Query: 663 EQPLMRL-TLVHILEATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHR 720
E+ L +L T+V + + + + IG G GTVY A + G+ VA+K+++ +
Sbjct: 2 EEILEKLRTIVSVGDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKE 61
Query: 721 EFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWD 779
E+ + + KH N+V L +E +V EY+ GSL D+ E +
Sbjct: 62 LIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV-------VTETCMDE 114
Query: 780 KRYKIACGAA-RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838
+ C + L FLH + +IHRDIK+ NILL + K+ DFG I+ ++
Sbjct: 115 GQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171
Query: 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
ST + GT ++ PE + D++S G++ +E+V G+ P
Sbjct: 172 RST-MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 80.4 bits (198), Expect = 1e-16
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 17/196 (8%)
Query: 687 IGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYC 744
IG G FG V+ L D VAVK + + +F E L + H N+V L+G C
Sbjct: 3 IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 62
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHII 804
+ + +V E + G +LR L+V + ++ AA G+ +L + H I
Sbjct: 63 TQKQPIYIVMELVQGGDFLTFLRTEGPRLKV---KELIQMVENAAAGMEYLE---SKHCI 116
Query: 805 HRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGR 859
HRD+ A N L+ E+ K++DFG++R E G IP PE GR
Sbjct: 117 HRDLAARNCLVTEKNVLKISDFGMSRE----EEDGVYASTGGMKQIPVKWTAPEALNYGR 172
Query: 860 STTRGDVYSFGVILLE 875
++ DV+SFG++L E
Sbjct: 173 YSSESDVWSFGILLWE 188
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 81.0 bits (200), Expect = 1e-16
Identities = 75/272 (27%), Positives = 119/272 (43%), Gaps = 38/272 (13%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKK----LSQAKTQGHREFTAEMETLGKVKHQNLVPLL 741
+G G +G+VYK P G T+A+K+ L ++K + E++ L K +V
Sbjct: 9 LGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESK---FNQIIMELDILHKAVSPYIVDFY 65
Query: 742 GYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAARGLAFLHHGF 799
G + + EYM GSLD + G + G + +I +GL FL
Sbjct: 66 GAFFIEGAVYMCMEYMDAGSLD---KLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH 122
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGR 859
+IIHRD+K +N+L+N + K+ DFG++ + A + T+I G Y+ PE +SG
Sbjct: 123 --NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA--SLAKTNI-GCQSYMAPERIKSGG 177
Query: 860 STTRG------DVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913
DV+S G+ +LE+ G+ P PE +F ++ A D
Sbjct: 178 PNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN--------IFAQL---SAIVDGD 226
Query: 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT 945
P L + + CL+ P RPT
Sbjct: 227 PPTLPSGYSDDAQDFVAK---CLNKIPNRRPT 255
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 2e-16
Identities = 69/209 (33%), Positives = 103/209 (49%), Gaps = 33/209 (15%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLS-QAKTQGHREFTA--EMETLGKVKHQNLVPLLG 742
IG+G +G VYKA G+ VA+KK+ + + +G TA E+ L ++ H N+V LL
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPS-TAIREISLLKELNHPNIVRLLD 65
Query: 743 YCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKR------YKIACGAARGLAFL 795
E KL LV+E+ LDL L+ S + G D Y++ +G+A+
Sbjct: 66 VV-HSENKLYLVFEF-----LDLDLKKYMDSSPLTGLDPPLIKSYLYQLL----QGIAYC 115
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA---CETHVSTDIAGTFGYIPP 852
H + ++HRD+K N+L++ E K+ADFGLAR TH T Y P
Sbjct: 116 H---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVV----TLWYRAP 168
Query: 853 EYGQSGRS-TTRGDVYSFGVILLELVTGK 880
E R +T D++S G I E+V +
Sbjct: 169 EILLGSRQYSTPVDIWSIGCIFAEMVNRR 197
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 3e-16
Identities = 88/305 (28%), Positives = 130/305 (42%), Gaps = 53/305 (17%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQNLVPLLG- 742
+G+G FG VYKA + G+ VA+KK+ + TA E++ L K+KH N+VPL+
Sbjct: 16 LGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDM 75
Query: 743 -YCSFDEEK------LLVYEYMVNGSLDL--WLRNRTGSLEVLGWDKRYKIACGAAR--- 790
D+ K +V YM + DL L N + L I C +
Sbjct: 76 AVERPDKSKRKRGSVYMVTPYMDH---DLSGLLENPSVKLTESQ------IKCYMLQLLE 126
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE----------THVS 840
G+ +LH HI+HRDIKA+NIL++ + K+ADFGLAR T
Sbjct: 127 GINYLHEN---HILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKY 183
Query: 841 TDIAGTFGYIPPEY-GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLV--- 896
T++ T Y PPE R TT D++ G + E+ T + P DI+ +L+
Sbjct: 184 TNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRR-PILQGKSDIDQLHLIFKL 242
Query: 897 ----------GWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM 946
GW +G + P L + + L + LS +P R T
Sbjct: 243 CGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTA 302
Query: 947 LHVLK 951
L+
Sbjct: 303 SDALE 307
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 80.5 bits (198), Expect = 3e-16
Identities = 70/218 (32%), Positives = 111/218 (50%), Gaps = 16/218 (7%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQ 735
+++ K +G+G + TVYK + +GK VA+K + + +G FTA E L +KH
Sbjct: 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG-TPFTAIREASLLKGLKHA 63
Query: 736 NLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL 795
N+V L E LV+EY V+ L ++ G L + RGL+++
Sbjct: 64 NIVLLHDIIHTKETLTLVFEY-VHTDLCQYMDKHPGGLHP---ENVKLFLFQLLRGLSYI 119
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE-- 853
H + I+HRD+K N+L+++ E K+ADFGLAR S +H ++ T Y PP+
Sbjct: 120 HQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSV-PSHTYSNEVVTLWYRPPDVL 175
Query: 854 YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIE 891
G + ST D++ G I +E++ G P KDI+
Sbjct: 176 LGSTEYSTCL-DMWGVGCIFVEMIQGVAAF-PGMKDIQ 211
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 3e-16
Identities = 65/218 (29%), Positives = 99/218 (45%), Gaps = 41/218 (18%)
Query: 680 NFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLV 738
NF K IG+G G V A G+ VAVKK+ K Q E+ + +H N+V
Sbjct: 23 NFVK---IGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIV 79
Query: 739 PLLGYCSFDEEKLLVYEYMVNGSL-DLWLRNR-------TGSLEVLGWDKRYKIACGAAR 790
+ +E +V E++ G+L D+ R T L VL +
Sbjct: 80 EMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVL-------------K 126
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYI 850
L+FLH +IHRDIK+ +ILL + K++DFG +S E + GT ++
Sbjct: 127 ALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSK-EVPRRKSLVGTPYWM 182
Query: 851 PPE------YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
PE YG T D++S G++++E+V G+ P
Sbjct: 183 APEVISRLPYG------TEVDIWSLGIMVIEMVDGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 4e-16
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 17/149 (11%)
Query: 743 YCSF--DEEKLLVYEYMVNGSLDLWLRNRTGSL--EVLGWDKRYKIACGAARGLAFLHHG 798
Y +F D E + E+M GSLD L+ + G + +LG KI+ RGL +L
Sbjct: 65 YGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPENILG-----KISIAVLRGLTYLREK 118
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLA-RLISACETHVSTDIAGTFGYIPPEYGQS 857
I+HRD+K SNIL+N E K+ DFG++ +LI + ++ GT Y+ PE Q
Sbjct: 119 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQG 172
Query: 858 GRSTTRGDVYSFGVILLELVTGKEPTGPE 886
T + D++S G+ L+E+ G+ P P
Sbjct: 173 THYTVQSDIWSLGLSLVEMAIGRYPIPPP 201
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 79.3 bits (195), Expect = 4e-16
Identities = 74/275 (26%), Positives = 119/275 (43%), Gaps = 36/275 (13%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQNLVPLLGYCS 745
+GDG FG VYKA + +A K+ K++ E + E++ L H N+V LL
Sbjct: 13 LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 72
Query: 746 FDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA-RGLAFLHHGFTPHII 804
++ ++ E+ G++D + LE + + ++ C L +LH II
Sbjct: 73 YENNLWILIEFCAGGAVDAVML----ELERPLTEPQIRVVCKQTLEALNYLHEN---KII 125
Query: 805 HRDIKASNILLNEEFEAKVADFGLARLISACETHV---STDIAGTFGYIPPEYGQSGRST 861
HRD+KA NIL + + K+ADFG +SA T GT ++ PE S
Sbjct: 126 HRDLKAGNILFTLDGDIKLADFG----VSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSK 181
Query: 862 TR-----GDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916
R DV+S G+ L+E+ EP E + V K+ K + + P+
Sbjct: 182 DRPYDYKADVWSLGITLIEMAQ-IEPPHHELNPMR-------VLLKIAKSEPPTLAQPSR 233
Query: 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+++ K + K CL N R T +L+
Sbjct: 234 WSSEFKDFLKK-------CLEKNVDARWTTTQLLQ 261
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 79.0 bits (195), Expect = 5e-16
Identities = 73/298 (24%), Positives = 124/298 (41%), Gaps = 59/298 (19%)
Query: 681 FCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLS-QAKTQGHREFTAEMETLGKVKH---Q 735
+ + +IG G +G VY+ +P G+ VA+K ++ + E+ L +++
Sbjct: 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPP 62
Query: 736 NLVPLLGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAAR---- 790
N+ G +L ++ EY GS+ ++ G + ++Y R
Sbjct: 63 NITKYYG-SYLKGPRLWIIMEYAEGGSVRTLMK--AGPI-----AEKY--ISVIIREVLV 112
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYI 850
L ++H +IHRDIKA+NIL+ K+ DFG+A L++ + ST GT ++
Sbjct: 113 ALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRST-FVGTPYWM 168
Query: 851 PPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909
PE G+ T+ D++S G+ + E+ TG P A
Sbjct: 169 APEVITEGKYYDTKADIWSLGITIYEMATGNPP--------------------YSDVDAF 208
Query: 910 DVLDPTVLTADSKPMML------KMLR--IAGDCLSDNPAMRPTM--LHVLKFLKEIK 957
+ L SKP L K+LR +A CL + P R + L K++K
Sbjct: 209 RAMM---LIPKSKPPRLEDNGYSKLLREFVAA-CLDEEPKERLSAEELLKSKWIKAHS 262
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 78.7 bits (194), Expect = 5e-16
Identities = 66/216 (30%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 683 KTNIIGDGGFGTVYKAA-LPDGKTVAVKKL-----SQAKTQGHRE----FTAEMETLGKV 732
K +IG G FG+VY G+ +AVK++ S + R E+ L ++
Sbjct: 4 KGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL 63
Query: 733 KHQNLVPLLGYCSFDEEKLLVY-EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARG 791
+H+N+V LG S D + L ++ EY+ GS+ L N E L + +I +G
Sbjct: 64 QHENIVQYLG-SSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQIL----KG 118
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIA-----GT 846
L +LH IIHRDIK +NIL++ + K++DFG+++ + A T+ A G+
Sbjct: 119 LNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGS 175
Query: 847 FGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
++ PE + T + D++S G +++E++TGK P
Sbjct: 176 VFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHP 211
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 79.0 bits (195), Expect = 7e-16
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 49/294 (16%)
Query: 687 IGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQNLVPLLGY 743
IG+G +G V+K + G+ VA+KK +++ + A E+ L ++KH NLV L+
Sbjct: 9 IGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEV 68
Query: 744 CSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH-HGFTPH 802
+ LV+EY + L+ +N G E L KI + + F H H
Sbjct: 69 FRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLI----KKIIWQTLQAVNFCHKHN---- 120
Query: 803 IIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE-------YG 855
IHRD+K NIL+ ++ + K+ DFG AR+++ TD T Y PE YG
Sbjct: 121 CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDY-TDYVATRWYRAPELLVGDTQYG 179
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG--------GNLV---GWVFQKMK 904
DV++ G + EL+TG +P P D++ G+L+ +F +
Sbjct: 180 ------PPVDVWAIGCVFAELLTG-QPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQ 232
Query: 905 KGQAADVLDPTVLTADSKPMMLKM-------LRIAGDCLSDNPAMRPTMLHVLK 951
+ + +P +P+ K L CL +P R + +L+
Sbjct: 233 FFKGLSIPEPE----TREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 81.4 bits (201), Expect = 8e-16
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 458 SNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLD 517
S W I + + N G +P + L +L +++L N G IPP LG++ LE LD
Sbjct: 413 STKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLD 472
Query: 518 VSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS--GICQNLSKISLTGNKDLCG 573
+S N G IPE++ L++L L+L N L G VP + G + + + T N LCG
Sbjct: 473 LSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCG 530
|
Length = 623 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 78.7 bits (195), Expect = 8e-16
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 33/215 (15%)
Query: 680 NFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKT--QGHREFT-AEMETLGKVKHQ 735
F KT +G G FG V GK A+K LS+AK E E L ++H
Sbjct: 4 EFIKT--LGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHP 61
Query: 736 NLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAAR--- 790
LV L G SF D+ L LV EY+ G L LR ++G + Y AA+
Sbjct: 62 FLVNLYG--SFQDDSNLYLVMEYVPGGELFSHLR-KSGRFP-EPVARFY-----AAQVVL 112
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYI 850
L +LH I++RD+K N+LL+ + K+ DFG A+ + + T + GT Y+
Sbjct: 113 ALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRV---KGRTYT-LCGTPEYL 165
Query: 851 PPEYGQS---GRSTTRGDVYSFGVILLELVTGKEP 882
PE S G++ D ++ G+++ E++ G P
Sbjct: 166 APEIILSKGYGKAV---DWWALGILIYEMLAGYPP 197
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 9e-16
Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 42/225 (18%)
Query: 680 NFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLS-QAKTQGHREFTA-EMETLGKVKHQN 736
+ K IG+G +GTV+KA + VA+K++ +G E+ L ++KH+N
Sbjct: 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 60
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA------- 789
+V L D++ LV+EY DL K+Y +C
Sbjct: 61 IVRLYDVLHSDKKLTLVFEYC---DQDL---------------KKYFDSCNGDIDPEIVK 102
Query: 790 -------RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD 842
+GLAF H + +++HRD+K N+L+N+ E K+ADFGLAR S +
Sbjct: 103 SFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAE 159
Query: 843 IAGTFGYIPPE--YGQSGRSTTRGDVYSFGVILLELVTGKEPTGP 885
+ T Y PP+ +G ST+ D++S G I EL P P
Sbjct: 160 VV-TLWYRPPDVLFGAKLYSTSI-DMWSAGCIFAELANAGRPLFP 202
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 78.0 bits (192), Expect = 1e-15
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 687 IGDGGFGTVYKAALPDGKTVA---VKKL-SQAKTQGHREFTAEMETLGKVKHQNLVPLLG 742
IG+G FG V G + A VK+L + A F E++ ++ H N++ LG
Sbjct: 3 IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLG 62
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAARGLAFLHHGFT 800
C LLV E+ G L +LR+ G + + K ++AC A GL +LH
Sbjct: 63 QCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMA-QKDVLQRMACEVASGLLWLHQA-- 119
Query: 801 PHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD--IAGTFGYIPPEYGQSG 858
IH D+ N L + K+ D+GLA L E + T A ++ PE +
Sbjct: 120 -DFIHSDLALRNCQLTADLSVKIGDYGLA-LEQYPEDYYITKDCHAVPLRWLAPELVEIR 177
Query: 859 RS-------TTRGDVYSFGVILLELVTGKEPTGPEFKDIE 891
T + +++S GV + EL T + P+ D +
Sbjct: 178 GQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ 217
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 78.5 bits (193), Expect = 1e-15
Identities = 70/213 (32%), Positives = 107/213 (50%), Gaps = 24/213 (11%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQNLVPLLGY 743
+G+G + TVYK + +G+ VA+K +S +G FTA E L +KH N+V L
Sbjct: 13 LGEGSYATVYKGISRINGQLVALKVISMKTEEG-VPFTAIREASLLKGLKHANIVLLHDI 71
Query: 744 CSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIAC---GAARGLAFLHHGFT 800
E V+EYM + L ++ G L Y + RGLA++H
Sbjct: 72 IHTKETLTFVFEYM-HTDLAQYMIQHPGGLH------PYNVRLFMFQLLRGLAYIHG--- 121
Query: 801 PHIIHRDIKASNILLNEEFEAKVADFGLARLIS-ACETHVSTDIAGTFGYIPPE--YGQS 857
HI+HRD+K N+L++ E K+ADFGLAR S +T+ S + T Y PP+ G +
Sbjct: 122 QHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVV--TLWYRPPDVLLGAT 179
Query: 858 GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI 890
S+ D++ G I +E++ G +P P D+
Sbjct: 180 DYSSAL-DIWGAGCIFIEMLQG-QPAFPGVSDV 210
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 78.6 bits (193), Expect = 1e-15
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 12/215 (5%)
Query: 670 TLVHILEATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMET 728
T+V I + + + IG G GTV+ A + G+ VA+K+++ K E+
Sbjct: 10 TIVSIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILV 69
Query: 729 LGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACG 787
+ ++K+ N+V L +E +V EY+ GSL D+ ++ +
Sbjct: 70 MKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAA------VCRE 123
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF 847
+ L FLH +IHRDIK+ N+LL + K+ DFG I+ ++ ST + GT
Sbjct: 124 CLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTP 179
Query: 848 GYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
++ PE + D++S G++ +E+V G+ P
Sbjct: 180 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 78.9 bits (194), Expect = 1e-15
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLS--QAKTQGHREFTAEMETLGKVKHQN 736
++F K + +G G G V+K + + +KL + K + E++ L +
Sbjct: 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 64
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSL--EVLGWDKRYKIACGAARGLAF 794
+V G D E + E+M GSLD L+ + G + ++LG K++ +GL +
Sbjct: 65 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILG-----KVSIAVIKGLTY 118
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA-RLISACETHVSTDIAGTFGYIPPE 853
L I+HRD+K SNIL+N E K+ DFG++ +LI + ++ GT Y+ PE
Sbjct: 119 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPE 172
Query: 854 YGQSGRSTTRGDVYSFGVILLELVTGKEPT-GPEFKDIE 891
Q + + D++S G+ L+E+ G+ P P+ K++E
Sbjct: 173 RLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELE 211
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 2e-15
Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 44/283 (15%)
Query: 681 FCKTNIIGDGGFGTVYKAAL----PDGKTVAVKKLSQAKTQG--HREFTAEMETLGKVKH 734
+ K IG+G FG KA L DGK +K+++ +K E E+ L +KH
Sbjct: 2 YVKVKKIGEGSFG---KAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKH 58
Query: 735 QNLVPLLGYCSFDEEKLL--VYEYMVNGSLDLWLRNRTGSL----EVLGWDKRYKIACGA 788
N+V SF+E L V +Y G L + + G L ++L W + +A
Sbjct: 59 PNIVQYQE--SFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLA--- 113
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFG 848
L H I+HRDIK+ NI L ++ K+ DFG+AR++++ T I GT
Sbjct: 114 ------LKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCI-GTPY 166
Query: 849 YIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908
Y+ PE ++ + D+++ G +L E+ T K E GN+ V K+ +G
Sbjct: 167 YLSPEICENRPYNNKSDIWALGCVLYEMCTLKHA-------FEAGNMKNLVL-KIIRGSY 218
Query: 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
V + + D + ++ ++ + NP RP++ +L+
Sbjct: 219 PPV--SSHYSYDLRNLVSQLFK-------RNPRDRPSVNSILE 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 77.4 bits (190), Expect = 2e-15
Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 40/279 (14%)
Query: 681 FCKTNIIGDGGFGTVYKAALPDGKT---VAVKKLSQAKTQGHRE-FTAEMETLGKVKHQN 736
F K IG G FG V+K D +T VA+K + + + E E+ L +
Sbjct: 6 FTKLERIGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 63
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGS-LDLWLRNRTGSLEVLGWDKRYKIACGAA---RGL 792
+ G + ++ EY+ GS LDL R G + ++IA +GL
Sbjct: 64 VTKYYGSYLKGTKLWIIMEYLGGGSALDLL---RAGPFD------EFQIATMLKEILKGL 114
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
+LH + IHRDIKA+N+LL+E+ + K+ADFG+A ++ + +T GT ++ P
Sbjct: 115 DYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAP 170
Query: 853 EYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912
E Q ++ D++S G+ +EL G+ P M+
Sbjct: 171 EVIQQSAYDSKADIWSLGITAIELAKGEPPNSD--------------MHPMRVLFLIPKN 216
Query: 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+P LT + + + CL+ +P+ RPT +LK
Sbjct: 217 NPPTLTGEFSKPFKEFIDA---CLNKDPSFRPTAKELLK 252
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 2e-15
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 686 IIGDGGFGTVYKAALPDGK----TVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQNLVPL 740
IG+G FG VY+ + VAVK + RE F E + + H ++V L
Sbjct: 13 CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKL 72
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT 800
+G + + +V E G L +L+ SL++ A LA+L +
Sbjct: 73 IGVIT-ENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTA---LAYLE---S 125
Query: 801 PHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRS 860
+HRDI A N+L++ K+ DFGL+R + + ++ ++ PE R
Sbjct: 126 KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRF 185
Query: 861 TTRGDVYSFGVILLE-LVTGKEP 882
T+ DV+ FGV + E L+ G +P
Sbjct: 186 TSASDVWMFGVCMWEILMLGVKP 208
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 4e-15
Identities = 60/203 (29%), Positives = 88/203 (43%), Gaps = 17/203 (8%)
Query: 687 IGDGGFGTVYKAALPD-GKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLG 742
+G GGFG V + GK A KKL + K +G + E + L KV + L
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV-SSRFIVSLA 59
Query: 743 YCSFDEEKL-LVYEYMVNGSLDLWLRN--RTGSLEVLGWDKRYKIACGAARGLAFLHHGF 799
Y ++ L LV M G L + N G E +I CG L LH
Sbjct: 60 YAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICG----LEHLHQRR 115
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGR 859
I++RD+K N+LL++ +++D GLA + + AGT GY+ PE Q
Sbjct: 116 ---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK--IKGRAGTPGYMAPEVLQGEV 170
Query: 860 STTRGDVYSFGVILLELVTGKEP 882
D ++ G L E++ G+ P
Sbjct: 171 YDFSVDWFALGCTLYEMIAGRSP 193
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 76.9 bits (190), Expect = 5e-15
Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 60/239 (25%)
Query: 687 IGDGGFGTVYKA---ALPDGKTVAVKKLSQAKTQGH-------REFTAEMETLGKVKHQN 736
IG G +G VYKA DGK A+KK K Q RE + L ++KH+N
Sbjct: 8 IGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACRE----IALLRELKHEN 63
Query: 737 LVPLLGYCSFDEEKL--LVYEYMVNGSLDLWLRNRTGSLEVLGWDKR------------- 781
+V L+ +K L+++Y DLW +++ + ++
Sbjct: 64 VVSLVEVFLEHADKSVYLLFDY---AEHDLW--------QIIKFHRQAKRVSIPPSMVKS 112
Query: 782 --YKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEA----KVADFGLARLI-SA 834
++I G + +LH + ++HRD+K +NIL+ E K+ D GLARL +
Sbjct: 113 LLWQILNG----VHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAP 165
Query: 835 CETHVSTD-IAGTFGYIPPEYGQSGRSTTRG-DVYSFGVILLELVTGKEPTGPEFKDIE 891
+ D + T Y PE R T+ D+++ G I EL+T + P FK E
Sbjct: 166 LKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLE----PIFKGRE 220
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 75.8 bits (186), Expect = 5e-15
Identities = 68/242 (28%), Positives = 109/242 (45%), Gaps = 22/242 (9%)
Query: 687 IGDGGFGTVYKAALPDGKT---VAVK--KLSQAKTQGHREFTAEMETLGKVKHQNLVPLL 741
+G+G FG+V + L + VAVK K++ +F +E + + H N++ L+
Sbjct: 7 LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66
Query: 742 GYCSFDEEK------LLVYEYMVNGSL-DLWLRNRTGSLEV-LGWDKRYKIACGAARGLA 793
G C E +++ +M +G L L +R G L K A G+
Sbjct: 67 GVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGME 126
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGT-FGYIPP 852
+L + IHRD+ A N +LNE VADFGL++ I + + IA +I
Sbjct: 127 YLS---SKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAI 183
Query: 853 EYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911
E TT+ DV+SFGV + E+ T G+ P + +E + ++ Q + Q D
Sbjct: 184 ESLADRVYTTKSDVWSFGVTMWEIATRGQTP----YPGVENSEIYDYLRQGNRLKQPPDC 239
Query: 912 LD 913
LD
Sbjct: 240 LD 241
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 6e-15
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 680 NFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQN 736
NF + +G+G + TVYK G+ VA+K++ +G TA E+ + ++KH+N
Sbjct: 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPS-TAIREISLMKELKHEN 59
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRT--GSLE-VLGWDKRYKIACGAARGLA 793
+V L + + +LV+EYM + L ++ G+L+ Y++ +G+A
Sbjct: 60 IVRLHDVIHTENKLMLVFEYM-DKDLKKYMDTHGVRGALDPNTVKSFTYQLL----KGIA 114
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE 853
F H ++HRD+K N+L+N+ E K+ADFGLAR S ++ T Y P+
Sbjct: 115 FCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVV-TLWYRAPD 170
Query: 854 YGQSGRS-TTRGDVYSFGVILLELVTGK 880
R+ +T D++S G I+ E++TG+
Sbjct: 171 VLLGSRTYSTSIDIWSVGCIMAEMITGR 198
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 76.2 bits (187), Expect = 6e-15
Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 15/205 (7%)
Query: 681 FCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQNL 737
+ K + +G+G + TV+K + VA+K++ +G TA E+ L +KH N+
Sbjct: 7 YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG-APCTAIREVSLLKNLKHANI 65
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH 797
V L + LV+EY+ + L +L N G+L + K + RGL++ H
Sbjct: 66 VTLHDIIHTERCLTLVFEYL-DSDLKQYLDN-CGNLMSMHNVKIFMFQL--LRGLSYCHK 121
Query: 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE--YG 855
I+HRD+K N+L+NE+ E K+ADFGLAR S S ++ T Y PP+ G
Sbjct: 122 ---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVV-TLWYRPPDVLLG 177
Query: 856 QSGRSTTRGDVYSFGVILLELVTGK 880
+ ST D++ G IL E+ TG+
Sbjct: 178 STEYSTPI-DMWGVGCILYEMATGR 201
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 75.7 bits (186), Expect = 6e-15
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 18/206 (8%)
Query: 686 IIGDGGFGTVYKA--ALPDGKT--VAVKKL-SQAKTQGHREFTAEMETLGKVKHQNLVPL 740
I+G G FG + + LP + VA+ L + + R F AE TLG+ H N+V L
Sbjct: 12 ILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRL 71
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH-GF 799
G + ++V EYM NG+LD +LR G L + + G A G+ +L G+
Sbjct: 72 EGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAG---QLMGMLPGLASGMKYLSEMGY 128
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG--TFGYIPPEYGQS 857
+H+ + A +L+N + K++ F RL + T ++G + PE Q
Sbjct: 129 ----VHKGLAAHKVLVNSDLVCKISGFR--RLQEDKSEAIYTTMSGKSPVLWAAPEAIQY 182
Query: 858 GRSTTRGDVYSFGVILLELVT-GKEP 882
++ DV+SFG+++ E+++ G+ P
Sbjct: 183 HHFSSASDVWSFGIVMWEVMSYGERP 208
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 8e-15
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 30/218 (13%)
Query: 674 ILEATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQ--AKTQGHREFTAEMETLG 730
+ E TN + +G G FG V A G+ VA+KK+ + + + E++ L
Sbjct: 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLK 64
Query: 731 KVKHQNLVPLLG-YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR------YK 783
++H+N++ L + S E+ V E + DL + LE K+ Y+
Sbjct: 65 HLRHENIISLSDIFISPLEDIYFVTELL---GTDLHRLLTSRPLE-----KQFIQYFLYQ 116
Query: 784 IACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDI 843
I RGL ++H + ++HRD+K SNIL+NE + K+ DFGLAR+ + T
Sbjct: 117 IL----RGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARI----QDPQMTGY 165
Query: 844 AGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGK 880
T Y PE + + D++S G I E++ GK
Sbjct: 166 VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGK 203
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 75.5 bits (185), Expect = 8e-15
Identities = 77/276 (27%), Positives = 122/276 (44%), Gaps = 34/276 (12%)
Query: 681 FCKTNIIGDGGFGTVYKAALPDGK-TVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQNLV 738
F K IG G FG VYK K VA+K + + + E E+ L + +
Sbjct: 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 65
Query: 739 PLLGYCSFDEEKLLVYEYMVNGS-LDLWLRNRTGSLEVLGWDKRY--KIACGAARGLAFL 795
G + ++ EY+ GS LDL + G LE + Y I +GL +L
Sbjct: 66 RYYGSYLKGTKLWIIMEYLGGGSALDLL---KPGPLE-----ETYIATILREILKGLDYL 117
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG 855
H + IHRDIKA+N+LL+E+ + K+ADFG+A ++ + +T GT ++ PE
Sbjct: 118 H---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVI 173
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915
+ + D++S G+ +EL G+ P D+ ++ + + PT
Sbjct: 174 KQSAYDFKADIWSLGITAIELAKGEPP----NSDLHPMRVLFLIPKNSP---------PT 220
Query: 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+ SKP CL+ +P RPT +LK
Sbjct: 221 LEGQYSKPFK----EFVEACLNKDPRFRPTAKELLK 252
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 75.5 bits (185), Expect = 1e-14
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 676 EATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKH 734
E ++F K IG+G G V A GK VAVKK+ K Q E+ + H
Sbjct: 22 EYLDSFIK---IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHH 78
Query: 735 QNLVPLLGYCSFDEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAARGLA 793
+N+V + +E +V E++ G+L D+ R ++ + R L+
Sbjct: 79 ENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA------TVCLSVLRALS 132
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE 853
+LH +IHRDIK+ +ILL + K++DFG +S E + GT ++ PE
Sbjct: 133 YLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK-EVPKRKSLVGTPYWMAPE 188
Query: 854 YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
T D++S G++++E++ G+ P
Sbjct: 189 VISRLPYGTEVDIWSLGIMVIEMIDGEPP 217
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 75.1 bits (184), Expect = 1e-14
Identities = 80/277 (28%), Positives = 125/277 (45%), Gaps = 36/277 (12%)
Query: 681 FCKTNIIGDGGFGTVYKAALPDGKT---VAVKKLSQAKTQGHRE-FTAEMETLGKVKHQN 736
F K IG G FG V+K D +T VA+K + + + E E+ L +
Sbjct: 6 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 63
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGS-LDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL 795
+ G D + ++ EY+ GS LDL G L+ + I +GL +L
Sbjct: 64 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDE---TQIATILREILKGLDYL 117
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD-IAGTFGYIPPEY 854
H + IHRDIKA+N+LL+E E K+ADFG+A ++ +T + + GT ++ PE
Sbjct: 118 H---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEV 172
Query: 855 GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914
+ ++ D++S G+ +EL G EP E ++ V + K P
Sbjct: 173 IKQSAYDSKADIWSLGITAIELAKG-EPPHSELHPMK-------VLFLIPKNNP-----P 219
Query: 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
T+ SKP+ CL+ P+ RPT +LK
Sbjct: 220 TLEGNYSKPLK----EFVEACLNKEPSFRPTAKELLK 252
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 74.8 bits (184), Expect = 2e-14
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKL-SQAKTQGHREFTAEMETLGKVKH-QNLVPLLGY 743
+G G +G V K +P G +AVK++ + +Q + +++ + V G
Sbjct: 9 LGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYG- 67
Query: 744 CSFDEEKLLVYEYMVNGSLD-----LWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG 798
F E + + +++ SLD ++ + T ++LG KIA + L +LH
Sbjct: 68 ALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILG-----KIAVSIVKALEYLHSK 122
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLA-RLISACETHVSTDIAGTFGYIPPE---- 853
+IHRD+K SN+L+N + K+ DFG++ L+ ++ T AG Y+ PE
Sbjct: 123 L--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLV---DSVAKTIDAGCKPYMAPERINP 177
Query: 854 -YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
Q G + DV+S G+ ++EL TG+ P
Sbjct: 178 ELNQKGYD-VKSDVWSLGITMIELATGRFP 206
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 75.8 bits (186), Expect = 2e-14
Identities = 68/224 (30%), Positives = 102/224 (45%), Gaps = 51/224 (22%)
Query: 687 IGDGGFGTVYKAALPDGKT---VAVKKLSQAKTQGHREFTA---------EMETLGKVKH 734
+G G +GTV A D +T VA+KKL +R F + E+ L +KH
Sbjct: 23 VGSGAYGTVCSAL--DRRTGAKVAIKKL-------YRPFQSELFAKRAYRELRLLKHMKH 73
Query: 735 QNLVPLLGYCSFDE------EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGA 788
+N++ LL + D + LV +M DL + E L D+ +
Sbjct: 74 ENVIGLLDVFTPDLSLDRFHDFYLVMPFM---GTDL---GKLMKHEKLSEDRIQFLVYQM 127
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG--- 845
+GL ++H IIHRD+K N+ +NE+ E K+ DFGLAR +++ G
Sbjct: 128 LKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR-------QTDSEMTGYVV 177
Query: 846 TFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFK 888
T Y PE + T D++S G I+ E++TGK P FK
Sbjct: 178 TRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGK----PLFK 217
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 73.5 bits (180), Expect = 3e-14
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 24/207 (11%)
Query: 686 IIGDGGFGT--VYKAALPDGKTVAVKKL----SQAKTQGHREFTAEMETLGKVKHQNLVP 739
++G+G FG + + D K A+K++ S + + R+ E L K+KH N+V
Sbjct: 7 VVGEGSFGRALLVQHVNSDQK-YAMKEIRLPKSSSAVEDSRK---EAVLLAKMKHPNIVA 62
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSL----EVLGWDKRYKIACGAARGLAFL 795
D +V EY G L ++ + G L +L W + + +
Sbjct: 63 FKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLG---------V 113
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG 855
H ++HRDIK+ NI L + + K+ DFG ARL+++ + T + GT Y+PPE
Sbjct: 114 QHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYV-GTPYYVPPEIW 172
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEP 882
++ + D++S G IL EL T K P
Sbjct: 173 ENMPYNNKSDIWSLGCILYELCTLKHP 199
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 73.8 bits (181), Expect = 4e-14
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 32/269 (11%)
Query: 706 VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDL 764
VAVK L + R +F E++ L ++K N++ LLG C ++ ++ EYM NG L+
Sbjct: 49 VAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQ 108
Query: 765 WLRNR---------------TGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIK 809
+L + L + + +A A G+ +L + + +HRD+
Sbjct: 109 FLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFVHRDLA 165
Query: 810 ASNILLNEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYS 868
N L+ E K+ADFG++R + A + + + ++ E G+ TT DV++
Sbjct: 166 TRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWA 225
Query: 869 FGVILLEL--VTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMML 926
FGV L E+ + ++P G E D + G F+ +G+ + P +ML
Sbjct: 226 FGVTLWEILMLCKEQPYG-ELTDEQVIENAGEFFR--DQGRQVYLFRPPPCPQGLYELML 282
Query: 927 KMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955
+ C S + RP+ + FL E
Sbjct: 283 Q-------CWSRDCRERPSFSDIHAFLTE 304
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 73.5 bits (180), Expect = 5e-14
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 13/183 (7%)
Query: 706 VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDL 764
VAVK L T+ R +F E++ + ++K+ N++ LLG C D+ ++ EYM NG L+
Sbjct: 47 VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQ 106
Query: 765 WLRNR--------TGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN 816
+L R ++ + +A A G+ +L + + +HRD+ N L+
Sbjct: 107 FLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNCLVG 163
Query: 817 EEFEAKVADFGLAR-LISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLE 875
+ K+ADFG++R L S + ++ E G+ TT DV++FGV L E
Sbjct: 164 NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWE 223
Query: 876 LVT 878
+ T
Sbjct: 224 MFT 226
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 73.1 bits (179), Expect = 5e-14
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
++G+G +G VYK + G+ A+K + + + E E+ L K H + Y
Sbjct: 23 VVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDE-EEEIKLEINMLKKYSHHRNIATY-YG 80
Query: 745 SF--------DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
+F D++ LV E+ GS+ ++N G+ L D I RGLA LH
Sbjct: 81 AFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGN--ALKEDWIAYICREILRGLAHLH 138
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY-- 854
+IHRDIK N+LL E E K+ DFG++ + +T I GT ++ PE
Sbjct: 139 ---AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIA 194
Query: 855 -GQSGRST--TRGDVYSFGVILLELVTGKEP 882
++ +T R D++S G+ +E+ G P
Sbjct: 195 CDENPDATYDYRSDIWSLGITAIEMAEGAPP 225
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 73.2 bits (179), Expect = 6e-14
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 13/223 (5%)
Query: 663 EQPLMRL-TLVHILEATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHR 720
E+ L +L ++V + + + + IG G GTVY A + G+ VA+K+++ +
Sbjct: 2 EEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKE 61
Query: 721 EFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDK 780
E+ + + K+ N+V L +E +V EY+ GSL + E +
Sbjct: 62 LIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT------ETCMDEG 115
Query: 781 RYKIACGAA-RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839
+ C + L FLH + +IHRDIK+ NILL + K+ DFG I+ ++
Sbjct: 116 QIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 172
Query: 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
ST + GT ++ PE + D++S G++ +E+V G+ P
Sbjct: 173 ST-MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 73.1 bits (179), Expect = 6e-14
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 679 NNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNL 737
+NF K IG+G G V A + GK VAVKK+ K Q E+ + +H+N+
Sbjct: 23 DNFIK---IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
V + +E +V E++ G+L D+ R ++ + + L+ LH
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI------AAVCLAVLKALSVLH 133
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQ 856
+IHRDIK+ +ILL + K++DFG +S E + GT ++ PE
Sbjct: 134 ---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKSLVGTPYWMAPELIS 189
Query: 857 SGRSTTRGDVYSFGVILLELVTGKEP 882
D++S G++++E+V G+ P
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDGEPP 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 73.1 bits (179), Expect = 7e-14
Identities = 70/206 (33%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 687 IGDGGFGTVYKAALPD-GKTVAVKKLS-QAKTQGH-----REFTAEMETLGKVKHQNLVP 739
IG G +GTVYKA P G VA+K + Q G RE A ++ L H N+V
Sbjct: 8 IGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVRE-VALLKRLEAFDHPNIVR 66
Query: 740 LLGYCS---FDEEK--LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAF 794
L+ C+ D E LV+E+ V+ L +L L + + RGL F
Sbjct: 67 LMDVCATSRTDRETKVTLVFEH-VDQDLRTYLDKVPPP--GLPAETIKDLMRQFLRGLDF 123
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY 854
LH I+HRD+K NIL+ + K+ADFGLAR+ S C+ + T + T Y PE
Sbjct: 124 LH---ANCIVHRDLKPENILVTSGGQVKLADFGLARIYS-CQMAL-TPVVVTLWYRAPEV 178
Query: 855 GQSGRSTTRGDVYSFGVILLELVTGK 880
T D++S G I E+ K
Sbjct: 179 LLQSTYATPVDMWSVGCIFAEMFRRK 204
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 74.0 bits (182), Expect = 8e-14
Identities = 69/208 (33%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 687 IGDGGFGTVYKAALP-DGKTVAVKKLS---QAKTQGHREFTAEMETLGKVKHQNLVPLL- 741
IG G FG V+ P DGK VA+KK+ Q R F E++ L KH N++ L
Sbjct: 8 IGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFR-ELKMLCFFKHDNVLSALD 66
Query: 742 ----GYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDK----RYKIACGAARGLA 793
+ EE +V E M + L S + L D Y+I RGL
Sbjct: 67 ILQPPHIDPFEEIYVVTELMQSD-----LHKIIVSPQPLSSDHVKVFLYQIL----RGLK 117
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE 853
+LH + I+HRDIK N+L+N K+ DFGLAR+ E+ T T Y PE
Sbjct: 118 YLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPE 174
Query: 854 YGQSGRS-TTRGDVYSFGVILLELVTGK 880
R T+ D++S G I EL+ +
Sbjct: 175 ILMGSRHYTSAVDIWSVGCIFAELLGRR 202
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 8e-14
Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 50/294 (17%)
Query: 687 IGDGGFGTVYKAALPDGKTV-AVKKLS---QAKTQGHREFTAEMETLGKVKH-QNLVPLL 741
IG G FGTV K T+ AVK++ K Q + +++ + + +V
Sbjct: 12 IGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQ--KRLLMDLDVVMRSSDCPYIVKFY 69
Query: 742 GYCSFDEEKLLVYEYMVNGSLDLWLR------NRTGSLEVLGWDKRYKIACGAARGLAFL 795
G F E + +++ SLD + + E+LG KIA + L +L
Sbjct: 70 G-ALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILG-----KIAVATVKALNYL 123
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA-RLI-SACETHVSTDIAGTFGYIPPE 853
IIHRD+K SNILL+ K+ DFG++ +L+ S +T D AG Y+ PE
Sbjct: 124 KE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTR---D-AGCRPYMAPE 177
Query: 854 YGQSGRST---TRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910
R DV+S G+ L E+ TGK P P++ VF Q
Sbjct: 178 RIDPSARDGYDVRSDVWSLGITLYEVATGKFPY-PKWNS---------VFD-----QLTQ 222
Query: 911 VL--DPTVLTADSKPMM-LKMLRIAGDCLSDNPAMRPT--MLHVLKFLKEIKVE 959
V+ DP +L+ + + CL + + RP L F+K+ +
Sbjct: 223 VVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYEER 276
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 72.4 bits (177), Expect = 9e-14
Identities = 70/287 (24%), Positives = 121/287 (42%), Gaps = 30/287 (10%)
Query: 680 NFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLS---QAKTQGHREFTAEMETLGKVKHQ 735
NF IG G F VY+A L D K VA+KK+ + ++ E++ L ++ H
Sbjct: 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHP 62
Query: 736 NLVPLLGYCSFDEEKLLVYEYMVNGSLDLWL----RNRTGSLEVLGWDKRYKIACGAARG 791
N++ L D E +V E G L + + + E W K + C A
Sbjct: 63 NVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVW-KYFVQLCSA--- 118
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
+ H + ++HRDIK +N+ + K+ D GL R S+ +T + + GT Y+
Sbjct: 119 ---VEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS-KTTAAHSLVGTPYYMS 174
Query: 852 PEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911
PE + D++S G +L E+ + P + ++ F +K + D
Sbjct: 175 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL---------FSLCQKIEQCDY 225
Query: 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958
P + T K+ + C+ +P RP + +V + K++ V
Sbjct: 226 --PPLPTEHYSE---KLRELVSMCIYPDPDQRPDIGYVHQIAKQMHV 267
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 1e-13
Identities = 55/165 (33%), Positives = 80/165 (48%), Gaps = 30/165 (18%)
Query: 791 GLAFL------HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIA 844
GL F+ HH + H+IHRDIK++NILL K+ DFG +++ +A VS D+
Sbjct: 146 GLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAAT---VSDDVG 202
Query: 845 GTFG----YIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900
TF Y+ PE + + + D++S GV+L EL+T K P E ++E V
Sbjct: 203 RTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE--NMEE------VM 254
Query: 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT 945
K G+ DP L P +M I LS +P RP+
Sbjct: 255 HKTLAGR----YDP--LPPSISP---EMQEIVTALLSSDPKRRPS 290
|
Length = 496 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 1e-13
Identities = 67/223 (30%), Positives = 102/223 (45%), Gaps = 46/223 (20%)
Query: 680 NFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHRE---FTA--EMETLGKVK 733
+ K N I +G +G VY+A G+ VA+KKL K + +E T+ E+ L K++
Sbjct: 6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKL---KMEKEKEGFPITSLREINILLKLQ 62
Query: 734 HQNLVPL----LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGS----------LEVLGWD 779
H N+V + +G S ++ +V EY+ + L + L++L
Sbjct: 63 HPNIVTVKEVVVG--SNLDKIYMVMEYVEHDLKSL-METMKQPFLQSEVKCLMLQLL--- 116
Query: 780 KRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839
G+A LH + I+HRD+K SN+LLN K+ DFGLAR +
Sbjct: 117 ----------SGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGS-PLKP 162
Query: 840 STDIAGTFGYIPPE--YGQSGRSTTRGDVYSFGVILLELVTGK 880
T + T Y PE G +T D++S G I EL+T K
Sbjct: 163 YTQLVVTLWYRAPELLLGAK-EYSTAIDMWSVGCIFAELLTKK 204
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 1e-13
Identities = 61/230 (26%), Positives = 95/230 (41%), Gaps = 43/230 (18%)
Query: 683 KTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHRE------------FTA--EME 727
K +G+G +G V KA GK VA+KK+ + FT E++
Sbjct: 13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELK 72
Query: 728 TLGKVKHQNLVPLLG-YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYK-IA 785
+ ++KH+N++ L+ Y D L V + M L + + + + + K I
Sbjct: 73 IMNEIKHENIMGLVDVYVEGDFINL-VMDIM-ASDLKKVVDRK-----IRLTESQVKCIL 125
Query: 786 CGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR-------------LI 832
GL LH + +HRD+ +NI +N + K+ADFGLAR
Sbjct: 126 LQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDE 182
Query: 833 SACETHVSTDIAGTFGYIPPE--YGQSGRSTTRGDVYSFGVILLELVTGK 880
+ T T Y PE G + + D++S G I EL+TGK
Sbjct: 183 TMQRREEMTSKVVTLWYRAPELLMG-AEKYHFAVDMWSVGCIFAELLTGK 231
|
Length = 335 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 72.3 bits (177), Expect = 1e-13
Identities = 68/220 (30%), Positives = 102/220 (46%), Gaps = 45/220 (20%)
Query: 681 FCKTNIIGDGGFGTVYK--AALPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQN 736
+ K +G+G + TV+K + L + VA+K++ +G TA E+ L +KH N
Sbjct: 8 YIKLEKLGEGTYATVFKGRSKLTE-NLVALKEIRLEHEEG-APCTAIREVSLLKDLKHAN 65
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA------- 789
+V L D+ LV+EY+ DL K+Y CG
Sbjct: 66 IVTLHDIVHTDKSLTLVFEYL---DKDL---------------KQYMDDCGNIMSMHNVK 107
Query: 790 -------RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD 842
RGLA+ H ++HRD+K N+L+NE E K+ADFGLAR S S +
Sbjct: 108 IFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNE 164
Query: 843 IAGTFGYIPPE--YGQSGRSTTRGDVYSFGVILLELVTGK 880
+ T Y PP+ G S S T+ D++ G I E+ +G+
Sbjct: 165 VV-TLWYRPPDVLLGSSEYS-TQIDMWGVGCIFFEMASGR 202
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 72.7 bits (179), Expect = 2e-13
Identities = 68/240 (28%), Positives = 92/240 (38%), Gaps = 47/240 (19%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHRE-----FTAEMETLGKV 732
++F +IG G FG V+ D G+ A+K L K+ + AE + L
Sbjct: 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLR--KSDMIKRNQIAHVRAERDILADA 58
Query: 733 KHQNLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAAR 790
+V L Y SF DEE L LV EYM G L L R + Y A
Sbjct: 59 DSPWIVKL--YYSFQDEEHLYLVMEYMPGGDLMNLL-IRKDVFPE-ETARFY-----IAE 109
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA-RLISACETHVSTD------- 842
+ L IHRDIK NIL++ + K+ADFGL ++ A + +
Sbjct: 110 LVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLF 169
Query: 843 --------------------IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
GT YI PE + D +S GVIL E++ G P
Sbjct: 170 RDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPP 229
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 71.2 bits (174), Expect = 2e-13
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 20/213 (9%)
Query: 680 NFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLS---QAKTQGHREFTAEMETLGKVKHQ 735
NF IG G F VY+A L DG VA+KK+ + + E++ L ++ H
Sbjct: 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 62
Query: 736 NLVPLLGYCSFDEEKLL--VYEYMVNGSLDLWLRN----RTGSLEVLGWDKRYKIACGAA 789
N++ Y SF E+ L V E G L +++ + E W K + C A
Sbjct: 63 NVIKY--YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVW-KYFVQLCSA- 118
Query: 790 RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGY 849
L H + ++HRDIK +N+ + K+ D GL R S+ +T + + GT Y
Sbjct: 119 -----LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS-KTTAAHSLVGTPYY 172
Query: 850 IPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
+ PE + D++S G +L E+ + P
Sbjct: 173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 205
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 2e-13
Identities = 68/270 (25%), Positives = 114/270 (42%), Gaps = 42/270 (15%)
Query: 706 VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDL 764
VAVK L + R +F E++ L ++ N+ LLG C+ D ++ EYM NG L+
Sbjct: 49 VAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQ 108
Query: 765 WLRNRTGSLEVLGWDKR--------YKIACGAARGLAFL-HHGFTPHIIHRDIKASNILL 815
+L+ L + + Y +A A G+ +L F +HRD+ N L+
Sbjct: 109 FLQKHVAETSGLACNSKSLSFSTLLY-MATQIASGMRYLESLNF----VHRDLATRNCLV 163
Query: 816 NEEFEAKVADFGLARLISACETHVSTDIAGT----FGYIPPEYGQSGRSTTRGDVYSFGV 871
+ + K+ADFG++R + + + + + G ++ E G+ TT+ DV++FGV
Sbjct: 164 GKNYTIKIADFGMSRNLYSSDYY---RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGV 220
Query: 872 ILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD----VLD-PTVLTADSKPMM 925
L E++T +E D V + D L P D +M
Sbjct: 221 TLWEILTLCREQPYEHLTD-------QQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELM 273
Query: 926 LKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955
L+ C + RPT + FL+
Sbjct: 274 LE-------CWRRDEEDRPTFREIHLFLQR 296
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 71.3 bits (174), Expect = 2e-13
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 13/223 (5%)
Query: 663 EQPLMRL-TLVHILEATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHR 720
E+ L +L ++V + + + + IG G GTVY A + G+ VA+++++ +
Sbjct: 3 EEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62
Query: 721 EFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDK 780
E+ + + K+ N+V L +E +V EY+ GSL + E +
Sbjct: 63 LIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT------ETCMDEG 116
Query: 781 RYKIACGAA-RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839
+ C + L FLH + +IHRDIK+ NILL + K+ DFG I+ E
Sbjct: 117 QIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSK 172
Query: 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
+ + GT ++ PE + D++S G++ +E++ G+ P
Sbjct: 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 3e-13
Identities = 35/86 (40%), Positives = 49/86 (56%)
Query: 190 LVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLI 249
L L N L+G +P +I L L ++L+ N G IP LG SL LDL N+ +G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 250 PEKIADLAQLQCLVLSHNNLSGPIPS 275
PE + L L+ L L+ N+LSG +P+
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPA 508
|
Length = 623 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 70.9 bits (174), Expect = 3e-13
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 685 NIIGDGGFGTVYKAALPDGKT-----VAVKKLSQ--AKTQGHREFTAEMETLGKVKHQNL 737
+++ +G FG ++ L D K V VK + ++ Q E L + HQN+
Sbjct: 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTL-LLQESCLLYGLSHQNI 70
Query: 738 VPLLGYCSFDEEKLLV-YEYMVNGSLDLWLRN----RTGSLEVLGWDKRYKIACGAARGL 792
+P+L C D E V Y YM G+L L+L+ + + L + +A A G+
Sbjct: 71 LPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGM 130
Query: 793 AFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG-TFGYI 850
++LH G +IH+DI A N +++EE + K+ D L+R + + H D ++
Sbjct: 131 SYLHKRG----VIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWM 186
Query: 851 PPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 882
E + ++ DV+SFGV+L EL+T G+ P
Sbjct: 187 ALESLVNKEYSSASDVWSFGVLLWELMTLGQTP 219
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 71.3 bits (175), Expect = 3e-13
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 29/210 (13%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN----LVPLL 741
IG G G VYK G +AVK++ +T E + L V + +V
Sbjct: 23 IGSGTCGQVYKMRFKKTGHVMAVKQM--RRTGNKEENKRILMDLDVVLKSHDCPYIVKCY 80
Query: 742 GYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSL--EVLGWDKRYKIACGAARGLAFL--HH 797
GY D + + E M + LD L+ G + ++LG K+ + L +L H
Sbjct: 81 GYFITDSDVFICMELM-STCLDKLLKRIQGPIPEDILG-----KMTVAIVKALHYLKEKH 134
Query: 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLA-RLISACETHVSTDIAGTFGYIPPEY-- 854
G +IHRD+K SNILL+ K+ DFG++ RL+ ++ T AG Y+ PE
Sbjct: 135 G----VIHRDVKPSNILLDASGNVKLCDFGISGRLV---DSKAKTRSAGCAAYMAPERID 187
Query: 855 --GQSGRSTTRGDVYSFGVILLELVTGKEP 882
+ + R DV+S G+ L+EL TG+ P
Sbjct: 188 PPDPNPKYDIRADVWSLGISLVELATGQFP 217
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 71.2 bits (174), Expect = 3e-13
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNL 737
N+ K IG+G G V A G+ VAVK + K Q E+ + +HQN+
Sbjct: 24 ENYIK---IGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNV 80
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAA-RGLAFL 795
V + EE ++ E++ G+L D+ + R +++ C + + L +L
Sbjct: 81 VEMYKSYLVGEELWVLMEFLQGGALTDIVSQTRLN-------EEQIATVCESVLQALCYL 133
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG 855
H + +IHRDIK+ +ILL + K++DFG IS + + GT ++ PE
Sbjct: 134 H---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK-DVPKRKSLVGTPYWMAPEVI 189
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEP 882
T D++S G++++E+V G+ P
Sbjct: 190 SRTPYGTEVDIWSLGIMVIEMVDGEPP 216
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 71.0 bits (174), Expect = 3e-13
Identities = 66/209 (31%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 683 KTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQNLVP 739
K IG+G +G VYKA +T+A+KK+ + TA E+ L +++H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVR 65
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR------YKIACGAARGLA 793
L ++ LV+EY LDL L+ S + R Y+I RG+A
Sbjct: 66 LQDVVHSEKRLYLVFEY-----LDLDLKKHMDSSPDFAKNPRLIKTYLYQI----LRGIA 116
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEA-KVADFGLARLISACETHVSTDIAGTFGYIPP 852
+ H + ++HRD+K N+L++ A K+ADFGLAR T T Y P
Sbjct: 117 YCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF-GIPVRTFTHEVVTLWYRAP 172
Query: 853 EYGQSGRS-TTRGDVYSFGVILLELVTGK 880
E R +T D++S G I E+V K
Sbjct: 173 EILLGSRHYSTPVDIWSVGCIFAEMVNQK 201
|
Length = 294 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 4e-13
Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 17/206 (8%)
Query: 681 FCKTNIIGDGGFGTVYK--AALPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQN 736
+ K + +G+G + TVYK + L D VA+K++ +G TA E+ L +KH N
Sbjct: 8 YIKLDKLGEGTYATVYKGRSKLTD-NLVALKEIRLEHEEG-APCTAIREVSLLKDLKHAN 65
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
+V L ++ LV+EY+ + L +L + G+ + K + RGL + H
Sbjct: 66 IVTLHDIIHTEKSLTLVFEYL-DKDLKQYL-DDCGNSINMHNVKLFLFQL--LRGLNYCH 121
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE--Y 854
++HRD+K N+L+NE E K+ADFGLAR S S ++ T Y PP+
Sbjct: 122 R---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVV-TLWYRPPDILL 177
Query: 855 GQSGRSTTRGDVYSFGVILLELVTGK 880
G + S T+ D++ G I E+ TG+
Sbjct: 178 GSTDYS-TQIDMWGVGCIFYEMSTGR 202
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 4e-13
Identities = 71/221 (32%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 680 NFCKTNIIGDGGFGTVY---KAALPD-GKTVAVKKL------SQAKTQGHREFTAEMETL 729
NF ++G G +G V+ K D GK A+K L +AKT H E + L
Sbjct: 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTR--TERQVL 58
Query: 730 GKVKHQNLVPLLGYCSFDEEKL-LVYEYMVNGSL--DLWLRNRTGSLEVLGWDKRYKIAC 786
V+ + L Y + KL L+ +Y+ G L L+ R EV R IA
Sbjct: 59 EAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEV-----RVYIA- 112
Query: 787 GAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGT 846
L LH II+RDIK NILL+ E + DFGL++ A E + GT
Sbjct: 113 EIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGT 169
Query: 847 FGYIPPEYGQSGRSTTRG-----DVYSFGVILLELVTGKEP 882
Y+ PE + G + G D +S GV+ EL+TG P
Sbjct: 170 IEYMAPEVIRGG---SGGHDKAVDWWSLGVLTFELLTGASP 207
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 70.3 bits (172), Expect = 5e-13
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 687 IGDGGFGTVYKAAL-PDG----KTVAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPL 740
+G+G FG V P+G + VAVK L H + E+E L + H+N+V
Sbjct: 12 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71
Query: 741 LGYCSFDEEK--LLVYEYMVNGSLDLWL-RNRTGSLEVLGWDKRYKIACGAARGLAFLHH 797
G C+ D L+ E++ +GSL +L RN+ + ++ K A +G+ +L
Sbjct: 72 KGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNK----INLKQQLKYAVQICKGMDYLG- 126
Query: 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH--VSTDIAGTFGYIPPEYG 855
+ +HRD+ A N+L+ E + K+ DFGL + I + + V D+ + PE
Sbjct: 127 --SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECL 184
Query: 856 QSGRSTTRGDVYSFGVILLELVT 878
+ DV+SFGV L EL+T
Sbjct: 185 IQSKFYIASDVWSFGVTLYELLT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 70.5 bits (172), Expect = 8e-13
Identities = 74/229 (32%), Positives = 106/229 (46%), Gaps = 47/229 (20%)
Query: 674 ILEATNNFCKTNIIGDGGFGTVYKAALPDGKT---VAVKKLS---QAKTQGHREFTAEME 727
I E + + +G G +G+V A D KT VAVKKLS Q+ R + E+
Sbjct: 12 IWEVPERYQNLSPVGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELR 68
Query: 728 TLGKVKHQNLVPLLGY----CSFDE--EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR 781
L +KH+N++ LL S +E + LV M DL N + L D
Sbjct: 69 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM---GADL---NNIVKCQKLTDDHV 122
Query: 782 YKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVST 841
+ RGL ++H + IIHRD+K SN+ +NE+ E K+ DFGLAR H
Sbjct: 123 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDD 172
Query: 842 DIAG---TFGYIPPE-------YGQSGRSTTRGDVYSFGVILLELVTGK 880
++ G T Y PE Y Q+ D++S G I+ EL+TG+
Sbjct: 173 EMTGYVATRWYRAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGR 215
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 69.8 bits (171), Expect = 8e-13
Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 680 NFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQN 736
++ K IG+G +G VYK G+ VA+KK+ + TA E+ L +++H N
Sbjct: 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPN 60
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR----------YKIAC 786
+V L + L++E++ S+DL L+ L + Y+I
Sbjct: 61 IVCLQDVLMQESRLYLIFEFL---SMDL-----KKYLDSLPKGQYMDAELVKSYLYQIL- 111
Query: 787 GAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGT 846
+G+ F H + ++HRD+K N+L++ + K+ADFGLAR V T T
Sbjct: 112 ---QGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAF-GIPVRVYTHEVVT 164
Query: 847 FGYIPPE--YGQSGRSTTRGDVYSFGVILLELVTGK 880
Y PE G S R +T D++S G I E+ T K
Sbjct: 165 LWYRAPEVLLG-SPRYSTPVDIWSIGTIFAEMATKK 199
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 9e-13
Identities = 34/88 (38%), Positives = 50/88 (56%)
Query: 346 LDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKV 405
L L L G IP++ LQ + L N + G+IP SLGS+ L L+L+ N +G +
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 406 PTSFGNLKELTHLDLSFNELDGQLPSSL 433
P S G L L L+L+ N L G++P++L
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 70.3 bits (172), Expect = 9e-13
Identities = 67/218 (30%), Positives = 103/218 (47%), Gaps = 52/218 (23%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLS---QAKTQGHREFTAEMETLGKVKHQNLVPLL- 741
+G G +G+V A G+ VA+KKLS Q++ R + E+ L ++H+N++ LL
Sbjct: 23 VGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYR-ELTLLKHMQHENVIGLLD 81
Query: 742 ---GYCSFDE--EKLLVYEYMVNGSLDLWLRNRTGSLEVLGW----DKRYKIACGAARGL 792
S DE + LV YM +T +++G DK + GL
Sbjct: 82 VFTSAVSGDEFQDFYLVMPYM-----------QTDLQKIMGHPLSEDKVQYLVYQMLCGL 130
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG---TFGY 849
++H + IIHRD+K N+ +NE+ E K+ DFGLAR H ++ G T Y
Sbjct: 131 KYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWY 180
Query: 850 IPPE-------YGQSGRSTTRGDVYSFGVILLELVTGK 880
PE Y Q+ D++S G I+ E++TGK
Sbjct: 181 RAPEVILNWMHYNQT------VDIWSVGCIMAEMLTGK 212
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 9e-13
Identities = 64/207 (30%), Positives = 94/207 (45%), Gaps = 22/207 (10%)
Query: 686 IIGDGGFGTVYKAALPD-GKTVAVK-------KLSQAKTQGHREFTAEMETLGKVKHQNL 737
IIG GGFG VY D GK A+K K+ Q +T E M +L
Sbjct: 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERI--MLSLVSTGDCPF 58
Query: 738 VPLLGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
+ + Y +KL + + M G L L E + R+ A GL +H
Sbjct: 59 IVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEK---EMRF-YATEIILGLEHMH 114
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQ 856
+ F +++RD+K +NILL+E +++D GLA S + H S GT GY+ PE Q
Sbjct: 115 NRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQ 168
Query: 857 SGRS-TTRGDVYSFGVILLELVTGKEP 882
G + + D +S G +L +L+ G P
Sbjct: 169 KGTAYDSSADWFSLGCMLFKLLRGHSP 195
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 69.8 bits (171), Expect = 9e-13
Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 12/143 (8%)
Query: 743 YCSFDEEKLL--VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKI-ACGAARGLAFLHHGF 799
+C+F ++ L V EY+ G L +++ +G + + R + A GL FLH
Sbjct: 62 FCTFQTKEHLFFVMEYLNGGDLMFHIQS-SGRFD----EARARFYAAEIICGLQFLH--- 113
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGR 859
II+RD+K N+LL+++ K+ADFG+ + E ST GT YI PE + +
Sbjct: 114 KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST-FCGTPDYIAPEILKGQK 172
Query: 860 STTRGDVYSFGVILLELVTGKEP 882
D +SFGV+L E++ G+ P
Sbjct: 173 YNESVDWWSFGVLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 1e-12
Identities = 36/85 (42%), Positives = 48/85 (56%)
Query: 369 GLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQ 428
GL L N L G IP + L L +NL+GN + G +P S G++ L LDLS+N +G
Sbjct: 422 GLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGS 481
Query: 429 LPSSLSNILNLVGLYLQHNKLSGPV 453
+P SL + +L L L N LSG V
Sbjct: 482 IPESLGQLTSLRILNLNGNSLSGRV 506
|
Length = 623 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 1e-12
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 687 IGDGGFGTVYKAAL------PDGKTVAVKKLS-QAKTQGHREFTAEMETLGKVKHQNLVP 739
+G+ FG VYK L + VA+K L +A+ EF E +++H N+V
Sbjct: 13 LGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVC 72
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR------------YKIACG 787
LLG + ++ +++ Y + L +L R+ +V D I
Sbjct: 73 LLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQ 132
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH-VSTDIAGT 846
A G+ FL + H++H+D+ N+L+ ++ K++D GL R + A + + + +
Sbjct: 133 IAAGMEFLS---SHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLP 189
Query: 847 FGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 882
++ PE G+ + D++S+GV+L E+ + G +P
Sbjct: 190 IRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 226
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 69.0 bits (169), Expect = 1e-12
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 687 IGDGGFGTVYKAALPDGKT-VAVKKLS-----QAKTQGHREFTAEMETLGKVKHQNLVPL 740
+G G FG V+ + A+K ++ + K + H E L +V H ++ L
Sbjct: 9 VGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVH--NEKRVLKEVSHPFIIRL 66
Query: 741 LGYCSFDEEKLL--VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG 798
+ + +++ L + EY+ G L +LRN G +I C L +LH
Sbjct: 67 --FWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCA----LEYLH-- 118
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVST-DIAGTFGYIPPEYGQS 857
+ I++RD+K NILL++E K+ DFG A+ + T + GT Y+ PE QS
Sbjct: 119 -SKEIVYRDLKPENILLDKEGHIKLTDFGFAK-----KLRDRTWTLCGTPEYLAPEVIQS 172
Query: 858 GRSTTRGDVYSFGVILLELVTGKEP 882
D ++ G+++ E++ G P
Sbjct: 173 KGHNKAVDWWALGILIYEMLVGYPP 197
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 68.5 bits (167), Expect = 1e-12
Identities = 78/282 (27%), Positives = 127/282 (45%), Gaps = 41/282 (14%)
Query: 681 FCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA---EMETLGKVKHQN 736
+C ++G G +G V DGK +KKL+ + RE A E + L ++KH N
Sbjct: 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLN-LRNASRRERKAAEQEAQLLSQLKHPN 60
Query: 737 LVPLLGYCSFDEEKLLVYEYM---VNGSLDLWLRNRTGSL----EVLGWDKRYKIACGAA 789
+V S++ E L+Y M G L L+ + G L +V+ W + +A
Sbjct: 61 IVAYRE--SWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMA---- 114
Query: 790 RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGY 849
L +LH HI+HRD+K N+ L KV D G+AR++ ST I GT Y
Sbjct: 115 --LQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLI-GTPYY 168
Query: 850 IPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909
+ PE + + DV++ G + E+ T K F + +LV ++ +G+
Sbjct: 169 MSPELFSNKPYNYKSDVWALGCCVYEMATLKHA----FNAKDMNSLV----YRIIEGK-- 218
Query: 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
L P + D P + +++ LS P RP++ +L+
Sbjct: 219 --LPP--MPKDYSPELGELIATM---LSKRPEKRPSVKSILR 253
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 68.9 bits (168), Expect = 2e-12
Identities = 61/208 (29%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 681 FCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQN 736
F + ++G GGFG V + GK A KKL + K +G E + L KV +
Sbjct: 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRF 61
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLD--LWLRNRTGSLEVLGWDKRYKIACGAARGLAF 794
+V L + LV M G L ++ G E +I CG L
Sbjct: 62 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCG----LED 117
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY 854
LH I++RD+K NILL++ +++D GLA + E GT GY+ PE
Sbjct: 118 LHQ---ERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEV 172
Query: 855 GQSGRSTTRGDVYSFGVILLELVTGKEP 882
++ R T D ++ G +L E++ G+ P
Sbjct: 173 VKNERYTFSPDWWALGCLLYEMIAGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 2e-12
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS 745
+G G +G VYKA L G+ AVK + E+ + + KH N+V G
Sbjct: 17 VGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL 76
Query: 746 FDEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAA-RGLAFLHHGFTPHI 803
E+ + EY GSL D++ + TG L L + C +GLA+LH +
Sbjct: 77 SREKLWICMEYCGGGSLQDIY--HVTGPLSEL----QIAYVCRETLQGLAYLH---SKGK 127
Query: 804 IHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG---QSGRS 860
+HRDIK +NILL + + K+ADFG+A I+A + I GT ++ PE ++G
Sbjct: 128 MHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFI-GTPYWMAPEVAAVEKNGGY 186
Query: 861 TTRGDVYSFGVILLELVTGKEP 882
D+++ G+ +EL + P
Sbjct: 187 NQLCDIWAVGITAIELAELQPP 208
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 68.5 bits (167), Expect = 2e-12
Identities = 65/219 (29%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 680 NFCKTNIIGDGGFGTVY---KAALPD-GKTVAVKKL------SQAKTQGHREFTAEMETL 729
NF ++G G +G V+ K + D GK A+K L +AKT H E + L
Sbjct: 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTR--TERQVL 58
Query: 730 GKVKHQNLVPLLGYCSFDEEKL-LVYEYMVNGSL--DLWLRNRTGSLEVLGWDKRYKIAC 786
++ + L Y + KL L+ +Y+ G L L R R EV + +A
Sbjct: 59 EHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLA- 117
Query: 787 GAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGT 846
L H II+RDIK NILL+ + DFGL++ E + GT
Sbjct: 118 --------LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGT 169
Query: 847 FGYIPPEY---GQSGRSTTRGDVYSFGVILLELVTGKEP 882
Y+ P+ G G D +S GV++ EL+TG P
Sbjct: 170 IEYMAPDIVRGGDGGHDKAV-DWWSMGVLMYELLTGASP 207
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 68.5 bits (167), Expect = 2e-12
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 11/206 (5%)
Query: 681 FCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQN 736
F + ++G GGFG V + GK A K+L + K +G E + L KV Q
Sbjct: 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQF 61
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
+V L + LV M G L + N G+++ + AA L L
Sbjct: 62 VVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNP----GFEEE-RALFYAAEILCGLE 116
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQ 856
+ ++RD+K NILL++ +++D GLA + E GT GY+ PE
Sbjct: 117 DLHRENTVYRDLKPENILLDDYGHIRISDLGLA--VKIPEGESIRGRVGTVGYMAPEVLN 174
Query: 857 SGRSTTRGDVYSFGVILLELVTGKEP 882
+ R T D + G ++ E++ G+ P
Sbjct: 175 NQRYTLSPDYWGLGCLIYEMIEGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 3e-12
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 35/215 (16%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLL 741
IG G +G V A GK VA+KK+ A T R E++ L KH N++ +
Sbjct: 12 NIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLR-ELKILRHFKHDNIIAIR 70
Query: 742 GYCSFD----EEKLLVYEYMVNGSLDLW---LRNRTGSLEVLGWDK----RYKIACGAAR 790
D Y+V +DL L + S + L + Y++ R
Sbjct: 71 -----DILRPPGADFKDVYVV---MDLMESDLHHIIHSDQPLTEEHIRYFLYQLL----R 118
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS---TDIAGTF 847
GL ++H + ++IHRD+K SN+L+NE+ E ++ DFG+AR +S+ T T+ T
Sbjct: 119 GLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATR 175
Query: 848 GYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKE 881
Y PE S TT D++S G I E++ ++
Sbjct: 176 WYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQ 210
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 68.4 bits (167), Expect = 3e-12
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 686 IIGDGGFGTVYKAALP-DGKTVAVKKLSQ--AKTQGHREFTAEMETLGKVKHQNLVPLLG 742
++G G FG V A L G+ AVK L + E T + + + +N P L
Sbjct: 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWEN--PFLT 59
Query: 743 --YCSFD--EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAAR---GLAFL 795
YC+F E V E++ G L ++++ G ++ Y+ AA GL FL
Sbjct: 60 HLYCTFQTKEHLFFVMEFLNGGDLMFHIQDK-GRFDL------YRATFYAAEIVCGLQFL 112
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG 855
H + II+RD+K N++L+ + K+ADFG+ + + ST GT YI PE
Sbjct: 113 H---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAST-FCGTPDYIAPEIL 168
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEP 882
Q + T D +SFGV+L E++ G+ P
Sbjct: 169 QGLKYTFSVDWWSFGVLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 68.8 bits (168), Expect = 3e-12
Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 27/218 (12%)
Query: 680 NFCKTNIIGDGGFGTVY---KAALPD-GKTVAVKKL------SQAKTQGHREFTAEMETL 729
NF ++G G +G V+ K D GK A+K L +AKT H E L
Sbjct: 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTR--TERNVL 58
Query: 730 GKVKHQNLVPLLGYCSFDEEKL-LVYEYMVNGSL--DLWLRNRTGSLEVLGWDKRYKIAC 786
V+ + L Y E KL L+ +Y+ G + L+ R+ EV + +A
Sbjct: 59 EHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILA- 117
Query: 787 GAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGT 846
L H I++RDIK NILL+ E + DFGL++ + E + GT
Sbjct: 118 --------LEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGT 169
Query: 847 FGYIPPEY--GQSGRSTTRGDVYSFGVILLELVTGKEP 882
Y+ PE G+ G D +S G+++ EL+TG P
Sbjct: 170 IEYMAPEIIRGKGGHGKAV-DWWSLGILIFELLTGASP 206
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 68.0 bits (166), Expect = 3e-12
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 686 IIGDGGFGTVYKAALPD-GKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQN--LVP 739
IIG GGFG VY D GK A+K L + + QG E L V + +
Sbjct: 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 60
Query: 740 LLGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG 798
+ Y +KL + + M G L L E + R+ A GL +H+
Sbjct: 61 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA---EMRF-YAAEIILGLEHMHNR 116
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG 858
F +++RD+K +NILL+E +++D GLA S + H S GT GY+ PE Q G
Sbjct: 117 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKG 170
Query: 859 RS-TTRGDVYSFGVILLELVTGKEP 882
+ + D +S G +L +L+ G P
Sbjct: 171 VAYDSSADWFSLGCMLFKLLRGHSP 195
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 3e-12
Identities = 67/205 (32%), Positives = 99/205 (48%), Gaps = 26/205 (12%)
Query: 687 IGDGGFGTVYKAA-LPDG-KTVAVKKLS-QAKTQGH-----REFTAEMETLGKVKHQNLV 738
IG+G +G V+KA L +G + VA+K++ Q +G RE A + L +H N+V
Sbjct: 9 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFEHPNVV 67
Query: 739 PLLGYCSFD----EEKL-LVYEYMVNGSLDLWLRN--RTGSLEVLGWDKRYKIACGAARG 791
L C+ E KL LV+E+ V+ L +L G D +++ RG
Sbjct: 68 RLFDVCTVSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIKDMMFQLL----RG 122
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
L FLH + ++HRD+K NIL+ + K+ADFGLAR+ S T + T Y
Sbjct: 123 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWYRA 177
Query: 852 PEYGQSGRSTTRGDVYSFGVILLEL 876
PE T D++S G I E+
Sbjct: 178 PEVLLQSSYATPVDLWSVGCIFAEM 202
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 67.3 bits (164), Expect = 3e-12
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 687 IGDGGFGTVYKAALPDGKT---VAVKKLSQAKTQGHREFTAEMETLGKVKHQ----NLVP 739
+G G FG V K K VA+K L K + + EM ++ HQ +V
Sbjct: 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVL---KNENEKSVRDEMMREAEIMHQLDNPYIVR 59
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF 799
++G C E +LV E G L+ +L + + V ++ + G+ +L
Sbjct: 60 MIGVCE-AEALMLVMEMASGGPLNKFLSGKKDEITV---SNVVELMHQVSMGMKYLEG-- 113
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF--GYIPPEYGQS 857
+ +HRD+ A N+LL + AK++DFGL++ + A +++ AG + + PE
Sbjct: 114 -KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINF 172
Query: 858 GRSTTRGDVYSFGVILLELVT-GKEP----TGPEFKD-IEGG 893
+ ++R DV+S+G+ + E + G++P GPE IE G
Sbjct: 173 RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQG 214
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 3e-12
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 19/214 (8%)
Query: 680 NFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKL-----SQAKTQGHREFTAEMETLGKVK 733
N+ ++G G FG VY D G+ +AVK++ SQ ++ E++ L ++
Sbjct: 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR 62
Query: 734 HQNLVPLLGYCSFD--EEKLLVY-EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAAR 790
H +V G C D E+KL ++ EYM GS+ L+ E + +RY +
Sbjct: 63 HDRIVQYYG-CLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENV--TRRYTRQI--LQ 117
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA-RLISACETHVS-TDIAGTFG 848
G+++LH I+HRDIK +NIL + K+ DFG + R+ + C + + GT
Sbjct: 118 GVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPY 174
Query: 849 YIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
++ PE + DV+S ++E++T K P
Sbjct: 175 WMSPEVISGEGYGRKADVWSVACTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 67.4 bits (164), Expect = 3e-12
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 19/214 (8%)
Query: 680 NFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLS--QAKTQGHREFTA---EMETLGKVK 733
N+ + ++G G FG VY D G+ +A K++ + +E +A E++ L ++
Sbjct: 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ 62
Query: 734 HQNLVPLLGYCSFD--EEKLLVY-EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAAR 790
H+ +V G C D E+ L ++ EYM GS+ L+ E + +I
Sbjct: 63 HERIVQYYG-CLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQIL----E 117
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA-RLISACETHVST-DIAGTFG 848
G+++LH I+HRDIK +NIL + K+ DFG + RL + C + + GT
Sbjct: 118 GMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPY 174
Query: 849 YIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
++ PE + DV+S G ++E++T K P
Sbjct: 175 WMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 4e-12
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 686 IIGDGGFGTVYKAAL-PDGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLL 741
++G GGFG V + GK A KKL + K +G E L KV + +V L
Sbjct: 7 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSL- 65
Query: 742 GYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAAR--GLAFLHHG 798
Y ++ L LV M G L + N G+D++ I A GL L
Sbjct: 66 AYAYETKDALCLVLTIMNGGDLKFHIYNMGNP----GFDEQRAIFYAAELCCGLEDLQR- 120
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG 858
I++RD+K NILL++ +++D GLA I ET GT GY+ PE +
Sbjct: 121 --ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGR--VGTVGYMAPEVINNE 176
Query: 859 RSTTRGDVYSFGVILLELVTGKEP 882
+ T D + G ++ E++ G+ P
Sbjct: 177 KYTFSPDWWGLGCLIYEMIQGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 5e-12
Identities = 62/223 (27%), Positives = 88/223 (39%), Gaps = 25/223 (11%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFT---AEMETLGKVKHQNLVPLLG 742
I G FG+VY A G A+K L ++ + T AE + V L
Sbjct: 4 ISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKL- 62
Query: 743 YCSFDEEK--LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT 800
Y SF + LV EY+ G ++ G L W K+Y G+ LH
Sbjct: 63 YYSFQSKDYLYLVMEYLNGGDCASLIK-TLGGLP-EDWAKQY--IAEVVLGVEDLHQR-- 116
Query: 801 PHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRS 860
IIHRDIK N+L+++ K+ DFGL+R + GT Y+ PE
Sbjct: 117 -GIIHRDIKPENLLIDQTGHLKLTDFGLSRNG-----LENKKFVGTPDYLAPETILGVGD 170
Query: 861 TTRGDVYSFGVILLELVTGKEPTGPE-----FKDIEGGNLVGW 898
D +S G ++ E + G P E F +I + W
Sbjct: 171 DKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRR-INW 212
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 7e-12
Identities = 70/204 (34%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 686 IIGDGGFGTVY---KAALPD-GKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVP 739
++G G FG V+ K PD G+ A+K L +A K + E + L +V H +V
Sbjct: 3 VLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVK 62
Query: 740 LLGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG 798
L Y E KL L+ +++ G DL+ R S EV+ ++ K A LA L H
Sbjct: 63 L-HYAFQTEGKLYLILDFLRGG--DLFTRL---SKEVMFTEEDVKFYL-AELALA-LDHL 114
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG 858
+ II+RD+K NILL+EE K+ DFGL++ S + GT Y+ PE
Sbjct: 115 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMAPEVVNRR 173
Query: 859 RSTTRGDVYSFGVILLELVTGKEP 882
T D +SFGV++ E++TG P
Sbjct: 174 GHTQSADWWSFGVLMFEMLTGSLP 197
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 67.4 bits (165), Expect = 8e-12
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 28/217 (12%)
Query: 687 IGDGGFGTVYKA---ALPDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVK-HQNLVPL 740
+G G +G V A + +TVA+KK++ K + E++ L + H+N+ L
Sbjct: 8 LGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCL 67
Query: 741 LG-----YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL 795
+F+E L +YE ++ L +R+ + Y+I CG L ++
Sbjct: 68 YDMDIVFPGNFNE--LYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCG----LKYI 121
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS---TDIAGTFGYIPP 852
H + +++HRD+K N+L+N + E K+ DFGLAR S + T+ T Y P
Sbjct: 122 H---SANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAP 178
Query: 853 EYGQSGRSTTRG-DVYSFGVILLELVTGKEPTGPEFK 888
E S +S T+ DV+S G IL EL+ K P FK
Sbjct: 179 EIMLSFQSYTKAIDVWSVGCILAELLGRK----PVFK 211
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 66.1 bits (161), Expect = 9e-12
Identities = 64/212 (30%), Positives = 96/212 (45%), Gaps = 21/212 (9%)
Query: 687 IGDGGFGTVYKAALPDGKT---VAVKKL-SQAKTQGHREFTAEMETLGKVKHQNLVPLLG 742
IG+G FG V + G T V VK+L A Q +F E + ++H NL+ LG
Sbjct: 3 IGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLG 62
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR--YKIACGAARGLAFLH-HGF 799
C+ LLV E+ G L +LR+ + E++ D ++AC A GL LH + F
Sbjct: 63 QCTEVTPYLLVMEFCPLGDLKGYLRSCRKA-ELMTPDPTTLQRMACEIALGLLHLHKNNF 121
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD-IAGTFGYIPPEYGQSG 858
IH D+ N LL + K+ D+GL+ + +V+ D + +I PE
Sbjct: 122 ----IHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEV 177
Query: 859 RS-------TTRGDVYSFGVILLELVT-GKEP 882
T +V+S GV + EL G +P
Sbjct: 178 HGNLLVVDQTKESNVWSLGVTIWELFELGSQP 209
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 1e-11
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 28/208 (13%)
Query: 687 IGDGGFGTVYKAALPD-GKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLV---- 738
IG G +G V A + + VA+KK++ A + R E++ L + H+N++
Sbjct: 13 IGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLR-EIKLLRHLDHENVIAIKD 71
Query: 739 --PLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDK----RYKIACGAARGL 792
P +F + +VYE M D L S + L D Y++ RGL
Sbjct: 72 IMPPPHREAF-NDVYIVYELM-----DTDLHQIIRSSQTLSDDHCQYFLYQLL----RGL 121
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
++H + +++HRD+K SN+LLN + K+ DFGLAR S ++ + + P
Sbjct: 122 KYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPE 178
Query: 853 EYGQSGRSTTRGDVYSFGVILLELVTGK 880
TT DV+S G I EL+ K
Sbjct: 179 LLLNCSEYTTAIDVWSVGCIFAELLGRK 206
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 67.3 bits (164), Expect = 1e-11
Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 31/240 (12%)
Query: 724 AEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYK 783
+E+ L H +V D++ LL+ EY G L+ ++ R E L + + Y+
Sbjct: 114 SELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLK--EHLPF-QEYE 170
Query: 784 IACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDI 843
+ + + L + ++HRD+K++NI L K+ DFG ++ S VS D+
Sbjct: 171 VGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYS---DSVSLDV 227
Query: 844 AGTFG----YIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP-TGPEFKDIEGGNLVGW 898
A +F Y+ PE + R + + D++S GVIL EL+T P GP ++I
Sbjct: 228 ASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREI-------- 279
Query: 899 VFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVL--KFLKEI 956
Q++ G+ DP P+ M + LS NPA+RPT +L +FLK +
Sbjct: 280 -MQQVLYGK----YDPFPC-----PVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329
|
Length = 478 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 65.5 bits (159), Expect = 2e-11
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 18/209 (8%)
Query: 686 IIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKH-QNLVPLLGYC 744
++G+G +G VYK +A K+ E E+ L K H +N+ G
Sbjct: 13 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 72
Query: 745 ------SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG 798
D++ LV E+ GS+ ++N G+ W I RGL+ LH
Sbjct: 73 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSHLHQH 130
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY---- 854
+IHRDIK N+LL E E K+ DFG++ + +T I GT ++ PE
Sbjct: 131 ---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIACD 186
Query: 855 -GQSGRSTTRGDVYSFGVILLELVTGKEP 882
+ D++S G+ +E+ G P
Sbjct: 187 ENPDATYDFKSDLWSLGITAIEMAEGAPP 215
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 2e-11
Identities = 67/268 (25%), Positives = 122/268 (45%), Gaps = 37/268 (13%)
Query: 687 IGDGGFGTVYKA---ALPDGKTVAVKKLSQAKTQG--HREFTAEMETLGKVKHQNLVPLL 741
+G G FGTV K KTVAVK L E E + ++ + +V ++
Sbjct: 3 LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMI 62
Query: 742 GYCSFDEEKLLVYEYMVNGSLDLWL-RNRTGSLEVLGWDKRYKIACGAARGLAFLH-HGF 799
G C E +LV E G L+ +L +N+ + + + ++ + G+ +L F
Sbjct: 63 GICE-AESWMLVMELAELGPLNKFLQKNKHVTEKNI-----TELVHQVSMGMKYLEETNF 116
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF--GYIPPEYGQS 857
+HRD+ A N+LL + AK++DFGL++ + A E + G + + PE
Sbjct: 117 ----VHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNY 172
Query: 858 GRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916
+ +++ DV+SFGV++ E + G++P +K ++G V Q ++ G+ +
Sbjct: 173 YKFSSKSDVWSFGVLMWEAFSYGQKP----YKGMKGNE----VTQMIESGERMEC----- 219
Query: 917 LTADSKPMMLKMLRIAGDCLSDNPAMRP 944
P M ++++ C + RP
Sbjct: 220 -PQRCPPEMYDLMKL---CWTYGVDERP 243
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 66.2 bits (161), Expect = 2e-11
Identities = 67/213 (31%), Positives = 96/213 (45%), Gaps = 41/213 (19%)
Query: 687 IGDGGFGTVYKAALPDGKT---VAVKKLS---QAKTQGHREFTAEMETLGKVKHQNLVPL 740
+G G +G+V A D + VAVKKLS Q+ R + E+ L +KH+N++ L
Sbjct: 23 VGSGAYGSVCSAY--DTRLRQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHMKHENVIGL 79
Query: 741 LGY----CSFDE--EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAF 794
L S + E LV M DL N + L + + RGL +
Sbjct: 80 LDVFTPATSIENFNEVYLVTNLM---GADL---NNIVKCQKLSDEHVQFLIYQLLRGLKY 133
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE- 853
+H + IIHRD+K SN+ +NE+ E ++ DFGLAR T T Y PE
Sbjct: 134 IH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD----DEMTGYVATRWYRAPEI 186
Query: 854 ------YGQSGRSTTRGDVYSFGVILLELVTGK 880
Y Q+ D++S G I+ EL+ GK
Sbjct: 187 MLNWMHYNQT------VDIWSVGCIMAELLKGK 213
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 2e-11
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 44/222 (19%)
Query: 683 KTNIIGDGGFGTVYKAA-LPDGKTVAVKK-LSQAKTQGHREFTA--EMETLGKVKHQNLV 738
K IG G FG V+KA + VA+KK L + + +G TA E++ L +KH+N+V
Sbjct: 16 KLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGF-PITALREIKILQLLKHENVV 74
Query: 739 PLLGYCS--------FDEEKLLVYEYMVNGSLDL--WLRNR--TGSLEVLGWDKRYKIAC 786
L+ C + LV+E+ + DL L N+ +L + K+
Sbjct: 75 NLIEICRTKATPYNRYKGSFYLVFEFCEH---DLAGLLSNKNVKFTLSEIK-----KVMK 126
Query: 787 GAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET---HVSTDI 843
GL ++H I+HRD+KA+NIL+ ++ K+ADFGLAR S + + T+
Sbjct: 127 MLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNR 183
Query: 844 AGTFGYIPPE-------YGQSGRSTTRGDVYSFGVILLELVT 878
T Y PPE YG D++ G I+ E+ T
Sbjct: 184 VVTLWYRPPELLLGERDYG------PPIDMWGAGCIMAEMWT 219
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 3e-11
Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 38/276 (13%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREF--------TAEMETLGKVKHQNLV 738
+G G FGTVY + D K VA ++L K E E + L K+ H +V
Sbjct: 8 LGKGSFGTVY--LVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIV 65
Query: 739 PLLGYCSFDEEK--LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
+ SF E ++ EY LD L + + L ++ + G+ ++H
Sbjct: 66 KF--HASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH 123
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR-LISACETHVSTDIAGTFGYIPPEYG 855
I+HRD+KA NI L K+ DFG++R L+ +C+ ++T GT Y+ PE
Sbjct: 124 ---QRRILHRDLKAKNIFLKNNL-LKIGDFGVSRLLMGSCD--LATTFTGTPYYMSPEAL 177
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915
+ ++ D++S G IL E+ EG N + V ++ +G P+
Sbjct: 178 KHQGYDSKSDIWSLGCILYEMCCLAHA-------FEGQNFLSVVL-RIVEGPT-----PS 224
Query: 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+ S+ + M + L+ +P++RP+ +L+
Sbjct: 225 LPETYSRQLNSIMQSM----LNKDPSLRPSAAEILR 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 65.8 bits (160), Expect = 3e-11
Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 35/258 (13%)
Query: 680 NFCKTNIIGDGGFGTVYKAALPDGK--TVAVKKLSQAKTQGHREFT---AEMETLGKVKH 734
NF +T +G G FG V A + VA+K+ ++K ++ +E + L + H
Sbjct: 33 NFIRT--LGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH 90
Query: 735 QNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACG---AARG 791
V L G + LV E+++ G +LR +KR+ G AA+
Sbjct: 91 PFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRR----------NKRFPNDVGCFYAAQI 140
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
+ + + +I++RD+K N+LL+++ K+ DFG A+++ +T T + GT YI
Sbjct: 141 VLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVV---DTRTYT-LCGTPEYIA 196
Query: 852 PEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911
PE + D ++ G+ + E++ G P N ++QK+ +G +
Sbjct: 197 PEILLNVGHGKAADWWTLGIFIYEILVGCPPF--------YANEPLLIYQKILEGI---I 245
Query: 912 LDPTVLTADSKPMMLKML 929
P L + K +M K+L
Sbjct: 246 YFPKFLDNNCKHLMKKLL 263
|
Length = 340 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 64.4 bits (157), Expect = 3e-11
Identities = 67/278 (24%), Positives = 117/278 (42%), Gaps = 51/278 (18%)
Query: 687 IGDGGFGTVYKAAL---PDGKTVA----VKKLSQAKTQGHREFTAEMET---LGKVKHQN 736
+G G F +YK L D V V + + HR+ A ET + ++ H++
Sbjct: 3 LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKH 62
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
LV L G C DE ++V EY+ G LD++L ++ L W + +A A L +L
Sbjct: 63 LVKLYGVCVRDE-NIMVEEYVKFGPLDVFLHREKNNVS-LHW--KLDVAKQLASALHYLE 118
Query: 797 HGFTPHIIHRDIKASNILL-----NEEFE--AKVADFGLARLISACETHVSTDIAGTFGY 849
++H ++ NIL+ NE + K++D G+ + + E V I +
Sbjct: 119 DK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVE-RIP----W 170
Query: 850 IPPEYGQSGRSTTR--GDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKG 906
I PE ++G+++ D +SFG LLE+ + G+EP + + ++
Sbjct: 171 IAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEP----LSTLS--------SSEKERF 218
Query: 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP 944
D L + ++ C + +P RP
Sbjct: 219 YQ----DQHRLPMPDCAELANLIN---QCWTYDPTKRP 249
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 4e-11
Identities = 31/81 (38%), Positives = 51/81 (62%)
Query: 170 NNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYEL 229
N L G +P ++ L+ + L+ N ++G++P +G++++L VLDL+ N F+G IP L
Sbjct: 427 NQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESL 486
Query: 230 GDCISLTTLDLGNNNLSGLIP 250
G SL L+L N+LSG +P
Sbjct: 487 GQLTSLRILNLNGNSLSGRVP 507
|
Length = 623 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 4e-11
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 17/207 (8%)
Query: 686 IIGDGGFGTVYKAALPD-GKTVAVKKL--SQAKTQGHREFTA---EMETLGKVKHQNLVP 739
++G G FG VY D G+ +AVK++ + +E A E++ L + H+ +V
Sbjct: 9 LLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQ 68
Query: 740 LLGYCSFDEEKLL--VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH 797
G E+ L E+M GS+ +++ S L + K G+++LH
Sbjct: 69 YYGCLRDPMERTLSIFMEHMPGGSI----KDQLKSYGALTENVTRKYTRQILEGVSYLH- 123
Query: 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLA-RLISACETHVS-TDIAGTFGYIPPEYG 855
+ I+HRDIK +NIL + K+ DFG + RL + C + + GT ++ PE
Sbjct: 124 --SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVI 181
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEP 882
+ D++S G ++E++T K P
Sbjct: 182 SGEGYGRKADIWSVGCTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 4e-11
Identities = 71/251 (28%), Positives = 110/251 (43%), Gaps = 28/251 (11%)
Query: 686 IIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLG-- 742
++G G FG V+ A L + A+K L + + M + P L
Sbjct: 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHL 61
Query: 743 YCSFD--EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAARGLAFLHHG 798
YC+F E V EY+ G DL ++ L Y +I CG L FLH
Sbjct: 62 YCTFQTKENLFFVMEYLNGG--DLMFHIQSCHKFDLPRATFYAAEIICG----LQFLH-- 113
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG 858
+ I++RD+K NILL+ + K+ADFG+ + + T GT YI PE
Sbjct: 114 -SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCT-FCGTPDYIAPEILLGQ 171
Query: 859 RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918
+ T D +SFGV+L E++ G+ P F + L FQ ++ + P LT
Sbjct: 172 KYNTSVDWWSFGVLLYEMLIGQSP----FHGHDEEEL----FQSIR---MDNPCYPRWLT 220
Query: 919 ADSKPMMLKML 929
++K +++K+
Sbjct: 221 REAKDILVKLF 231
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 65.1 bits (159), Expect = 6e-11
Identities = 72/252 (28%), Positives = 105/252 (41%), Gaps = 62/252 (24%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQA----KTQ-GHREFTAEMETLGKV 732
++F +IG G FG V D G A+KKL ++ K Q H AE + L +
Sbjct: 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAH--VRAERDILAEA 58
Query: 733 KHQNLVPLLGYCSF-DEEKL-LVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAA 789
+ +V L Y SF DE L L+ EY+ G + L ++ T + E R+ IA
Sbjct: 59 DNPWVVKL--YYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEE----TRFYIA-ETI 111
Query: 790 RGLAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGL-------------------- 828
+ +H G+ IHRDIK N+LL+ + K++DFGL
Sbjct: 112 LAIDSIHKLGY----IHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHAL 167
Query: 829 --ARLISACETHVSTDIA---------------GTFGYIPPE-YGQSGRSTTRGDVYSFG 870
L + S A GT YI PE + Q+G + D +S G
Sbjct: 168 PSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKE-CDWWSLG 226
Query: 871 VILLELVTGKEP 882
VI+ E++ G P
Sbjct: 227 VIMYEMLVGYPP 238
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 7e-11
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 44/203 (21%)
Query: 703 GKTVAVKKLSQAKTQGHRE---FTAEMETLGKVKHQNLVPLL--GYCSFDEEKLL--VYE 755
G VA+K L + + F E ++ H N+V LL G LL V+E
Sbjct: 3 GHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEA---PPGLLFAVFE 59
Query: 756 YMVNGSLDLWLRNR-------TGSL--EVLGWDKRYKIACGAARGLAFLHHGFTPHIIHR 806
Y+ +L L TG L +VL +AC +G I+HR
Sbjct: 60 YVPGRTLREVLAADGALPAGETGRLMLQVLD-----ALACAHNQG-----------IVHR 103
Query: 807 DIKASNILLNE---EFEAKVADFGLARLIS----ACETHVS--TDIAGTFGYIPPEYGQS 857
D+K NI++++ AKV DFG+ L+ A ++ T++ GT Y PE +
Sbjct: 104 DLKPQNIMVSQTGVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRG 163
Query: 858 GRSTTRGDVYSFGVILLELVTGK 880
T D+Y++G+I LE +TG+
Sbjct: 164 EPVTPNSDLYAWGLIFLECLTGQ 186
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 64.6 bits (157), Expect = 8e-11
Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 20/235 (8%)
Query: 200 HLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQL 259
+ + NL L LDLN N I EL + +LT+LDL NNN++ + P + L
Sbjct: 84 DGSENLLNLLPLPSLDLNLNRLRSNIS-ELLELTNLTSLDLDNNNITDIPPLIGLLKSNL 142
Query: 260 QCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVV 319
+ L LS N + S N+P+L + DLS+N LS +P+ L + +
Sbjct: 143 KELDLSDNKIE-------SLPSPLRNLPNLKNL------DLSFNDLSD-LPKLLSNLSNL 188
Query: 320 VDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTG 379
+L L+ N +S +P + L+ L LDLS N + + S + L GL L NN+L
Sbjct: 189 NNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE- 245
Query: 380 SIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLS 434
+P S+G+L L L+L+ N++S +S G+L L LDLS N L LP
Sbjct: 246 DLPESIGNLSNLETLDLSNNQISS--ISSLGSLTNLRELDLSGNSLSNALPLIAL 298
|
Length = 394 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 63.4 bits (154), Expect = 9e-11
Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 46/292 (15%)
Query: 686 IIGDGGFGTVYKAALP----DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVP 739
++G G FG+V +A L + VAVK L + EF E + + H N++
Sbjct: 6 MLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIK 65
Query: 740 LLGYCSFDEEK------LLVYEYMVNGSLDLWL-RNRTG------SLEVLGWDKRYKIAC 786
L+G K +++ +M +G L +L +R G L+ L +
Sbjct: 66 LIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTL-----VRFMI 120
Query: 787 GAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG- 845
A G+ +L + + IHRD+ A N +LNE VADFGL++ I + + + +
Sbjct: 121 DIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKL 177
Query: 846 TFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMK 904
++ E TT DV++FGV + E++T G+ P + +E + ++ + +
Sbjct: 178 PVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTP----YAGVENSEIYNYLIKGNR 233
Query: 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
Q D L+ D +M + C S P RP+ H+ L+ I
Sbjct: 234 LKQPPDCLE------DVYELMCQ-------CWSPEPKCRPSFQHLRDQLELI 272
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 9e-11
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 12/182 (6%)
Query: 706 VAVKKL-SQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDL 764
VAVK L A +F E++ + ++K N++ LL C + ++ EYM NG L+
Sbjct: 49 VAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQ 108
Query: 765 WLRNRTGSLEVLGWDKRY-------KIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE 817
+L D +A A G+ +L + + +HRD+ N L+ +
Sbjct: 109 FLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRNCLVGK 165
Query: 818 EFEAKVADFGLAR-LISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLEL 876
+ K+ADFG++R L S + ++ E G+ TT DV++FGV L E+
Sbjct: 166 NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEI 225
Query: 877 VT 878
+T
Sbjct: 226 LT 227
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 1e-10
Identities = 65/211 (30%), Positives = 93/211 (44%), Gaps = 37/211 (17%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLS---QAKTQGHREFTAEMETLGKVKHQNLVPLLG 742
IG G G V A G+ VA+KKLS Q T R + E+ + V H+N++ LL
Sbjct: 24 IGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYR-ELVLMKLVNHKNIIGLLN 82
Query: 743 YC----SFDE--EKLLVYEYM-------VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA 789
S +E + LV E M + LD R L Y++ CG
Sbjct: 83 VFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLD---HERMSYL-------LYQMLCG-- 130
Query: 790 RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGY 849
+ LH + IIHRD+K SNI++ + K+ DFGLAR +A + + T T Y
Sbjct: 131 --IKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 183
Query: 850 IPPEYGQSGRSTTRGDVYSFGVILLELVTGK 880
PE D++S G I+ E++ G
Sbjct: 184 RAPEVILGMGYKENVDIWSVGCIMGEMIRGT 214
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 63.9 bits (156), Expect = 1e-10
Identities = 70/260 (26%), Positives = 109/260 (41%), Gaps = 43/260 (16%)
Query: 686 IIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEM------ETLGKVKHQNLV 738
++G G FG V A G+ A+K L + E + M ET +H LV
Sbjct: 6 VLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLV 65
Query: 739 PLLGYCSFDEEKLLVYEYMVNGSL------DLWLRNRTGSLEVLGWDKRYKIACGAARGL 792
L ++ V EY G L D++ R + AC GL
Sbjct: 66 NLFACFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEPRA----------VFYAAC-VVLGL 114
Query: 793 AFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
+LH + I++RD+K N+LL+ E K+ADFGL + ST GT ++
Sbjct: 115 QYLHENK----IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTST-FCGTPEFLA 169
Query: 852 PEYGQSGRSTTRG-DVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910
PE + S TR D + GV++ E++ G+ P F G+ VF + +
Sbjct: 170 PEV-LTETSYTRAVDWWGLGVLIYEMLVGESP----FP----GDDEEEVFDSI---VNDE 217
Query: 911 VLDPTVLTADSKPMMLKMLR 930
V P L+ ++ +M ++LR
Sbjct: 218 VRYPRFLSREAISIMRRLLR 237
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 1e-10
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 686 IIGDGGFGTVYKAAL-PDGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLL 741
++G GGFG V + GK A KKL + K +G E + L KV + +V L
Sbjct: 7 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL- 65
Query: 742 GYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT 800
Y ++ L LV M G L + N + G+D+ + AA L
Sbjct: 66 AYAYETKDALCLVLTLMNGGDLKFHIYN----MGNPGFDEE-RAVFYAAEITCGLEDLHR 120
Query: 801 PHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRS 860
I++RD+K NILL++ +++D GLA I ET GT GY+ PE ++ R
Sbjct: 121 ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGR--VGTVGYMAPEVVKNERY 178
Query: 861 TTRGDVYSFGVILLELVTGKEP 882
T D + G ++ E++ GK P
Sbjct: 179 TFSPDWWGLGCLIYEMIEGKSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 1e-10
Identities = 59/204 (28%), Positives = 91/204 (44%), Gaps = 16/204 (7%)
Query: 687 IGDGGFGTVYKAAL-PDGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLG 742
+G GGFG V + GK A KKL++ K +G+ E L KV + +V L
Sbjct: 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLA- 59
Query: 743 YCSFDE--EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA--RGLAFLHHG 798
+F + LV M G L + N E G+ + A GL LH
Sbjct: 60 -YAFQTKTDLCLVMTIMNGGDLRYHIYNV--DEENPGFPEPRACFYTAQIISGLEHLHQR 116
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG 858
II+RD+K N+LL+ + +++D GLA + ++ + AGT G++ PE Q
Sbjct: 117 ---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK-TKGYAGTPGFMAPELLQGE 172
Query: 859 RSTTRGDVYSFGVILLELVTGKEP 882
D ++ GV L E++ + P
Sbjct: 173 EYDFSVDYFALGVTLYEMIAARGP 196
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 1e-10
Identities = 70/256 (27%), Positives = 113/256 (44%), Gaps = 33/256 (12%)
Query: 686 IIGDGGFGTVYKAALPDG----KTVAVKKLSQAKTQGHREFTA----EMETLGKVKHQNL 737
++G GG+G V++ G K A+K L +A +++ TA E L VKH +
Sbjct: 3 VLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFI 62
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAF-LH 796
V L+ + L+ EY+ G L + L +E AC ++ L
Sbjct: 63 VDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFME--------DTACFYLSEISLALE 114
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQ 856
H II+RD+K NILL+ + K+ DFGL + S E V+ GT Y+ PE
Sbjct: 115 HLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKE-SIHEGTVTHTFCGTIEYMAPEILM 173
Query: 857 SGRSTTRGDVYSFGVILLELVTGKEPTGPEF--KDIEGGNLVGWVFQKMKKGQAADVLDP 914
D +S G ++ +++TG P E K I+ K+ KG+ P
Sbjct: 174 RSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTID----------KILKGKLN---LP 220
Query: 915 TVLTADSKPMMLKMLR 930
LT +++ ++ K+L+
Sbjct: 221 PYLTPEARDLLKKLLK 236
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 1e-10
Identities = 70/213 (32%), Positives = 93/213 (43%), Gaps = 43/213 (20%)
Query: 687 IGDGGFGTVYKAALPD--GKTVAVKKLS---QAKTQGHREFTAEMETLGKVKHQNLVPLL 741
IG G G V AA G VAVKKLS Q +T R + E+ L V H+N++ LL
Sbjct: 29 IGSGAQGIVC-AAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLL 86
Query: 742 GYCSFDEEK--------LLVYEYM-------VNGSLDLWLRNRTGSLEVLGWDKRYKIAC 786
F +K LV E M ++ LD R L Y++ C
Sbjct: 87 NV--FTPQKSLEEFQDVYLVMELMDANLCQVIHMELD---HERMSYL-------LYQMLC 134
Query: 787 GAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGT 846
G + H + IIHRD+K SNI++ + K+ DFGLAR +AC + T T
Sbjct: 135 G-------IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TACTNFMMTPYVVT 185
Query: 847 FGYIPPEYGQSGRSTTRGDVYSFGVILLELVTG 879
Y PE D++S G I+ ELV G
Sbjct: 186 RYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 218
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 2e-10
Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 27/208 (12%)
Query: 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQ-----AKTQGHREFTAEMETLGKVKHQNLV 738
+G G FG V A G+ A+K L + K H E L ++ H +V
Sbjct: 24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQH--VAQEKSILMELSHPFIV 81
Query: 739 PLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAF-- 794
+ CSF DE ++ + E++V G L LR + G + K A LAF
Sbjct: 82 NM--MCSFQDENRVYFLLEFVVGGELFTHLR-KAGRFP----NDVAKFYH-AELVLAFEY 133
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY 854
LH + II+RD+K N+LL+ + KV DFG A+ + + + GT Y+ PE
Sbjct: 134 LH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKV----PDRTFTLCGTPEYLAPEV 186
Query: 855 GQSGRSTTRGDVYSFGVILLELVTGKEP 882
QS D ++ GV+L E + G P
Sbjct: 187 IQSKGHGKAVDWWTMGVLLYEFIAGYPP 214
|
Length = 329 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 2e-10
Identities = 67/234 (28%), Positives = 96/234 (41%), Gaps = 15/234 (6%)
Query: 660 AMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQG 718
+F L L + + T+ + IG G +G VYK DG AVK L
Sbjct: 3 GLFPYNSSMLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDV- 61
Query: 719 HREFTAEMETLGKV-KHQNLVPLLG-YCSFDE----EKLLVYEYMVNGSLDLWLRNRTGS 772
E AE L + H N+V G + D+ + LV E GS+ ++
Sbjct: 62 DEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLIC 121
Query: 773 LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832
+ L I GA GL LH+ IIHRD+K +NILL E K+ DFG++ +
Sbjct: 122 GQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVSAQL 178
Query: 833 SACETHVSTDIAGTFGYIPP----EYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
++ +T + F P E R DV+S G+ +EL G P
Sbjct: 179 TSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPP 232
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 2e-10
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 790 RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR--LISACETHVSTDIAGTF 847
R L ++H T ++ HRD+K NIL N + + K+ DFGLAR TD T
Sbjct: 114 RALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATR 170
Query: 848 GYIPPEYGQS--GRSTTRGDVYSFGVILLELVTGK 880
Y PE S + T D++S G I E++TGK
Sbjct: 171 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK 205
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 3e-10
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 20/102 (19%)
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIA---- 844
A GL FLH + II+RD+K N++L+ E K+ADFG+ C+ ++
Sbjct: 111 AIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGM------CKENIFGGKTTRTF 161
Query: 845 -GTFGYIPPE---YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
GT YI PE Y G+S D ++FGV+L E++ G+ P
Sbjct: 162 CGTPDYIAPEIIAYQPYGKSV---DWWAFGVLLYEMLAGQPP 200
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 3e-10
Identities = 67/237 (28%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 659 IAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTV-AVKKLSQ---A 714
++ +E+ ++T + + + K +IG G FG V K V A+K LS+
Sbjct: 25 LSRYEKAAEKITKLRMKAEDFDVIK--VIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMI 82
Query: 715 KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL--VYEYMVNGSLDLWLRNRTGS 772
K F E + + + +V L + +F ++K L V EYM G L N +
Sbjct: 83 KRSDSAFFWEERDIMAHANSEWIVQL--HYAFQDDKYLYMVMEYMPGGDL----VNLMSN 136
Query: 773 LEVL-GWDKRYKIACGAARGLAFLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGLA- 829
++ W + Y A L +H GF IHRD+K N+LL++ K+ADFG
Sbjct: 137 YDIPEKWARFYTAEVVLA--LDAIHSMGF----IHRDVKPDNMLLDKSGHLKLADFGTCM 190
Query: 830 RLISACETHVSTDIAGTFGYIPPEY----GQSGRSTTRGDVYSFGVILLELVTGKEP 882
++ + T + GT YI PE G G D +S GV L E++ G P
Sbjct: 191 KMDANGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 246
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 62.6 bits (152), Expect = 3e-10
Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 20/203 (9%)
Query: 690 GGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749
G G V+ A P V K+ Q T E L V H +++ +
Sbjct: 77 GSEGRVFVATKPGQPDPVVLKIGQKGTT-----LIEAMLLQNVNHPSVIRMKDTLVSGAI 131
Query: 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIK 809
+V + + L +L R+ L + D+ I GL +LH IIHRD+K
Sbjct: 132 TCMVLPHY-SSDLYTYLTKRSRPLPI---DQALIIEKQILEGLRYLH---AQRIIHRDVK 184
Query: 810 ASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSF 869
NI +N+ + + D G A+ + +AGT PE + ++ D++S
Sbjct: 185 TENIFINDVDQVCIGDLGAAQFPVVAPAFLG--LAGTVETNAPEVLARDKYNSKADIWSA 242
Query: 870 GVILLELVT------GKEPTGPE 886
G++L E++ P+ PE
Sbjct: 243 GIVLFEMLAYPSTIFEDPPSTPE 265
|
Length = 357 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 4e-10
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS 745
IG G +G VYKA + G+ A+K + + E+ + KH N+V G
Sbjct: 17 IGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL 76
Query: 746 FDEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHII 804
++ + E+ GSL D++ + TG L + ++ +GL +LH + +
Sbjct: 77 RRDKLWICMEFCGGGSLQDIY--HVTGPLSES---QIAYVSRETLQGLYYLH---SKGKM 128
Query: 805 HRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG---QSGRST 861
HRDIK +NILL + K+ADFG++ I+A + I GT ++ PE + G
Sbjct: 129 HRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFI-GTPYWMAPEVAAVERKGGYN 187
Query: 862 TRGDVYSFGVILLELVTGKEP 882
D+++ G+ +EL + P
Sbjct: 188 QLCDIWAVGITAIELAELQPP 208
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 5e-10
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 36/223 (16%)
Query: 681 FCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVP 739
+ +G G G V+ A D K VAVKK+ Q + E++ + ++ H N+V
Sbjct: 7 YMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 66
Query: 740 L---LGYCSFDEEKLL-----------VYEYMVNGSLDLWLRNRTGSLEVLGWDKR---Y 782
+ LG D + + V EYM + L N + R Y
Sbjct: 67 VYEVLGPSGSDLTEDVGSLTELNSVYIVQEYM-----ETDLANVLEQGPLSEEHARLFMY 121
Query: 783 KIACGAARGLAFLHHGFTPHIIHRDIKASNILLN-EEFEAKVADFGLARLISACETH--- 838
++ RGL ++H + +++HRD+K +N+ +N E+ K+ DFGLAR++ +H
Sbjct: 122 QLL----RGLKYIH---SANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGY 174
Query: 839 VSTDIAGTFGYIPPEYGQSGRSTTRG-DVYSFGVILLELVTGK 880
+S + + Y P S + T+ D+++ G I E++TGK
Sbjct: 175 LSEGLVTKW-YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 216
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 5e-10
Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 679 NNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKK-LSQAKTQGHREFT-AEMETLGKVKHQ 735
+ + K IG+G +G VYKA GK VA+KK + +G E+ L +
Sbjct: 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSES 60
Query: 736 N-LVPLLGYCSFDEEK-----LLVYEYMVNGSLDLWL-RNRTGSLEVLGWDKRYKIACGA 788
+V LL +E+ LV+EY+ + L ++ N G L
Sbjct: 61 IYIVRLLDVEHVEEKNGKPSLYLVFEYL-DSDLKKFMDSNGRGPGRPLPAKTIKSFMYQL 119
Query: 789 ARGLAFLH-HGFTPHIIHRDIKASNILLNEEFEA-KVADFGLARLISACETHVSTDIAGT 846
+G+A H HG ++HRD+K N+L++++ K+AD GL R S + +I T
Sbjct: 120 LKGVAHCHKHG----VMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIV-T 174
Query: 847 FGYIPPE--YGQSGRSTTRGDVYSFGVILLELVTG 879
Y PE G + ST D++S G I E+
Sbjct: 175 LWYRAPEVLLGSTHYSTPV-DIWSVGCIFAEMSRK 208
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 6e-10
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 687 IGDGGFGTVYKAALPDG-------KTVAVKKLSQAKTQGHRE-----FTAEMETLGK-VK 733
+G G FG VYK + K + V + K + R+ +E+ + + ++
Sbjct: 8 LGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLR 67
Query: 734 HQNLVPLLGYCSFDE-EKLLVYEYMVNGSLDLWLRNRTGSLEVLGW----DKRYKIACGA 788
H N+V Y +F E ++L + ++ G+ L SL+ ++ + I
Sbjct: 68 HPNIVRY--YKTFLENDRLYIVMDLIEGAP---LGEHFNSLKEKKQRFTEERIWNIFVQM 122
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFG 848
L +LH I+HRD+ +NI+L E+ + + DFGLA+ T + GT
Sbjct: 123 VLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQ--PESKLTSVVGTIL 178
Query: 849 YIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
Y PE ++ + DV++FG IL ++ T + P
Sbjct: 179 YSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPP 212
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 1e-09
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 11/216 (5%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKT-VAVKKLSQAKTQGHREFTA--EMETLGKVKHQ 735
N F ++G+G +G V K + K VA+KK ++ + T E++ L +K +
Sbjct: 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE 60
Query: 736 NLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL 795
N+V L + LV+EY+ L+L G +K + + +
Sbjct: 61 NIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPP----EKVRSYIYQLIKAIHWC 116
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG 855
H I+HRDIK N+L++ K+ DFG AR +S T+ T Y PE
Sbjct: 117 HKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELL 173
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIE 891
D++S G IL EL G +P P +I+
Sbjct: 174 LGAPYGKAVDMWSVGCILGELSDG-QPLFPGESEID 208
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 60.5 bits (146), Expect = 1e-09
Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 26/230 (11%)
Query: 682 CKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQG-HREFTAEMETLGKVKHQNLVPL 740
CK +G G +G VYKA DGK L Q + G E+ L ++KH N++ L
Sbjct: 7 CK---VGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISL 63
Query: 741 LG-YCSFDEEKL-LVYEYMVNGSLDLW--LRNRTGSLEVLGWDKRYKIACGAARGLAF-- 794
+ S + K+ L+++Y DLW ++ S K ++ G + L +
Sbjct: 64 QKVFLSHADRKVWLLFDY---AEHDLWHIIKFHRAS---KANKKPVQLPRGMVKSLLYQI 117
Query: 795 ---LHHGFTPHIIHRDIKASNILL----NEEFEAKVADFGLARLI-SACETHVSTD-IAG 845
+H+ ++HRD+K +NIL+ E K+AD G ARL S + D +
Sbjct: 118 LDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVV 177
Query: 846 TFGYIPPEYGQSGRSTTRG-DVYSFGVILLELVTGKEPTGPEFKDIEGGN 894
TF Y PE R T+ D+++ G I EL+T + +DI+ N
Sbjct: 178 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN 227
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 1e-09
Identities = 63/208 (30%), Positives = 98/208 (47%), Gaps = 25/208 (12%)
Query: 685 NIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGY 743
NIIG+G FG VY+A D + VA+KK+ Q +R E+ + + H N++ L Y
Sbjct: 72 NIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNR----ELLIMKNLNHINIIFLKDY 127
Query: 744 ----CSFDEEKLL----VYEYM---VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGL 792
C EK + V E++ V+ + + RN L Y++ R L
Sbjct: 128 YYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQL----CRAL 183
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEEFEA-KVADFGLARLISACETHVSTDIAGTFGYIP 851
A++H F I HRD+K N+L++ K+ DFG A+ + A + VS I F P
Sbjct: 184 AYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSY-ICSRFYRAP 239
Query: 852 PEYGQSGRSTTRGDVYSFGVILLELVTG 879
+ TT D++S G I+ E++ G
Sbjct: 240 ELMLGATNYTTHIDLWSLGCIIAEMILG 267
|
Length = 440 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 2e-09
Identities = 76/243 (31%), Positives = 110/243 (45%), Gaps = 34/243 (13%)
Query: 321 DLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGS 380
L LN N L L LTNLT+LDL N +T P L+ L L +N++ S
Sbjct: 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIE-S 154
Query: 381 IPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLV 440
+P L +L L L+L+ N LS +P NL L +LDLS N++ LP + + L
Sbjct: 155 LPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKI-SDLPPEIELLSALE 212
Query: 441 GLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFT 500
L L +N + L SL NL L+ L+L NK
Sbjct: 213 ELDLSNNSII---------------------------ELLSSLSNLKNLSGLELSNNKLE 245
Query: 501 GEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNL 560
++P +GNL LE LD+S N++ ++ SL+NL L L+ N L +P + L
Sbjct: 246 -DLPESIGNLSNLETLDLSNNQIS--SISSLGSLTNLRELDLSGNSLSNALPLIALLLLL 302
Query: 561 SKI 563
++
Sbjct: 303 LEL 305
|
Length = 394 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 2e-09
Identities = 54/167 (32%), Positives = 79/167 (47%), Gaps = 21/167 (12%)
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV-STDIAGTF 847
ARG+ FL + IHRD+ A NILL+E K+ DFGLAR I +V D
Sbjct: 183 ARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 239
Query: 848 GYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKG 906
++ PE TT+ DV+SFGV+L E+ + G P G + +++K+G
Sbjct: 240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASP-------YPGVQIDEEFCRRLKEG 292
Query: 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953
+ P T + +ML DC +NP RPT +++ L
Sbjct: 293 --TRMRAPEYATPEIYSIML-------DCWHNNPEDRPTFSELVEIL 330
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 2e-09
Identities = 66/204 (32%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 686 IIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGK-VKHQNLVPL 740
+IG G FG V A DGK AVK L + K + + AE L K VKH LV L
Sbjct: 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGL 61
Query: 741 LGYCSFD-EEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG 798
+ SF +KL V +Y+ G L L+ E +IA L +LH
Sbjct: 62 --HYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASA----LGYLH-- 113
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG 858
+ +II+RD+K NILL+ + + DFGL + ST GT Y+ PE +
Sbjct: 114 -SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTST-FCGTPEYLAPEVLRKQ 171
Query: 859 RSTTRGDVYSFGVILLELVTGKEP 882
D + G +L E++ G P
Sbjct: 172 PYDRTVDWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 2e-09
Identities = 62/217 (28%), Positives = 93/217 (42%), Gaps = 22/217 (10%)
Query: 679 NNFCKTNIIGDGGFGTVY----KAALPDGKTVAVKKLSQAKT--QGHREFTAEMETLGKV 732
+F +++G G FG V KA G A+K + ++ Q F E + +
Sbjct: 1 KDFDVKSLVGRGHFGEVQVVREKAT---GDIYAMKVMKKSVLLAQETVSFFEEERDILSI 57
Query: 733 KHQNLVPLLGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARG 791
+ +P L Y D++ L LV EY G L L L NR + Y A
Sbjct: 58 SNSPWIPQLQYAFQDKDNLYLVMEYQPGGDL-LSLLNRYEDQFDEDMAQFY-----LAEL 111
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
+ +H +HRDIK N+L++ K+ADFG A ++A + S GT YI
Sbjct: 112 VLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIA 171
Query: 852 PEYGQSGRSTTRG------DVYSFGVILLELVTGKEP 882
PE + +G D +S GVI E++ G+ P
Sbjct: 172 PEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSP 208
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 2e-09
Identities = 67/234 (28%), Positives = 105/234 (44%), Gaps = 34/234 (14%)
Query: 682 CKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQG-HREFTAEMETLGKVKHQNLVPL 740
CK +G G +G VYKA DGK L Q + G E+ L ++KH N++ L
Sbjct: 7 CK---VGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIAL 63
Query: 741 LG-YCSFDEEKL-LVYEYMVNGSLDLWL-----RNRTGSLEVLGWDKR------YKIACG 787
+ S + K+ L+++Y DLW R + + + + Y+I
Sbjct: 64 QKVFLSHSDRKVWLLFDY---AEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQIL-- 118
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILL----NEEFEAKVADFGLARLI-SACETHVSTD 842
G+ +LH + ++HRD+K +NIL+ E K+AD G ARL S + D
Sbjct: 119 --DGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLD 173
Query: 843 -IAGTFGYIPPEYGQSGRSTTRG-DVYSFGVILLELVTGKEPTGPEFKDIEGGN 894
+ TF Y PE R T+ D+++ G I EL+T + +DI+ N
Sbjct: 174 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN 227
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 2e-09
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 791 GLAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGY 849
GL FLH G II+RD+K N+LL+ E K+ADFG+ + ++ GT Y
Sbjct: 108 GLQFLHERG----IIYRDLKLDNVLLDSEGHIKIADFGMCKE-GILGGVTTSTFCGTPDY 162
Query: 850 IPPE---YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
I PE Y G + D ++ GV+L E++ G+ P
Sbjct: 163 IAPEILSYQPYGPAV---DWWALGVLLYEMLAGQSP 195
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 59.5 bits (144), Expect = 2e-09
Identities = 72/266 (27%), Positives = 110/266 (41%), Gaps = 37/266 (13%)
Query: 686 IIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEME-----TLGKVKHQNLVP 739
++G G FG V A L G+ AVK L + + M +L + H L
Sbjct: 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-NHPFLTQ 60
Query: 740 LLGYCSFD--EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH 797
L YC F + V E++ G L ++ E + A L FLH
Sbjct: 61 L--YCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDE----ARARFYAAEITSALMFLH- 113
Query: 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQS 857
II+RD+K N+LL+ E K+ADFG+ + ++ GT YI PE Q
Sbjct: 114 --DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKE-GIFNGKTTSTFCGTPDYIAPEILQE 170
Query: 858 GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917
D ++ GV+L E++ G P E +D +F+ + + V+ PT L
Sbjct: 171 MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD--------LFEAILNDE---VVYPTWL 219
Query: 918 TADSKPMMLKMLRIAGDCLSDNPAMR 943
+ D+ +LK ++ NP MR
Sbjct: 220 SQDAVD-ILKAF------MTKNPTMR 238
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 3e-09
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 28 NQ-LSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPREL 86
NQ L G +P+ + ++S+ LS N G IPP +G+ + L+ + LS N +GSIP L
Sbjct: 427 NQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESL 486
Query: 87 CTSESLEEIDLDGNLLTGTIEG 108
SL ++L+GN L+G +
Sbjct: 487 GQLTSLRILNLNGNSLSGRVPA 508
|
Length = 623 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 3e-09
Identities = 30/89 (33%), Positives = 48/89 (53%)
Query: 142 LDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHL 201
L LD+ G IP I L + + N + G++P +G+ +LE L L+ N G +
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 202 PKEIGNLSALSVLDLNSNLFDGIIPYELG 230
P+ +G L++L +L+LN N G +P LG
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 3e-09
Identities = 41/125 (32%), Positives = 53/125 (42%), Gaps = 36/125 (28%)
Query: 238 LDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGV 297
L L N L G IP I+ L LQ + LS N++ G IP P L I V
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIP------------PSLGSITSLEV 470
Query: 298 FDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPI 357
DLSYN +G IP SL +LT+L L+L+ N L+G +
Sbjct: 471 LDLSYNSFNG------------------------SIPESLGQLTSLRILNLNGNSLSGRV 506
Query: 358 PSEFG 362
P+ G
Sbjct: 507 PAALG 511
|
Length = 623 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 3e-09
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFG 848
+ GL FLH II+RD+K N++L+ E K+ADFG+ + + + GT
Sbjct: 111 SVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-HMVDGVTTRTFCGTPD 166
Query: 849 YIPPE---YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKD 889
YI PE Y G+S D +++GV+L E++ G+ P E +D
Sbjct: 167 YIAPEIIAYQPYGKSV---DWWAYGVLLYEMLAGQPPFDGEDED 207
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 58.8 bits (142), Expect = 3e-09
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 687 IGDGGFGTVYKAALPD-GKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLG 742
+G GGFG V + + GK A KKL + K G + E E L KV +V L
Sbjct: 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNL-A 59
Query: 743 YCSFDEEK--LLVYEYMVNGSLDLWLRN-RTGSLE---VLGWDKRYKIACGAARGLAFLH 796
Y +F+ + LV M G L + N LE V+ + +I CG +
Sbjct: 60 Y-AFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSA--QITCG-------IL 109
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQ 856
H + I++RD+K N+LL+++ +++D GLA + + T AGT GY+ PE +
Sbjct: 110 HLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLA--VELKDGKTITQRAGTNGYMAPEILK 167
Query: 857 SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKD 889
+ D ++ G + E+V G+ P FKD
Sbjct: 168 EEPYSYPVDWFAMGCSIYEMVAGRTP----FKD 196
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 3e-09
Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 29/224 (12%)
Query: 687 IGDGGFGTVYKAALPDGKTVA---VKKL-SQAKTQGHREFTAEMETLGKVKHQNLVPLLG 742
IG+G FG V + + VA VK+L + A ++ EF + + ++H N++ LG
Sbjct: 3 IGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLG 62
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRN-----RTGSLEVLGWDKRYKIACGAARGLAFLH- 796
C LLV+EY G L +L R L +L ++AC A G+ +H
Sbjct: 63 QCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLL-----QRMACEIAAGVTHMHK 117
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFG--YIPPEY 854
H F +H D+ N L + KV D+G+ E ++ T+ ++ PE
Sbjct: 118 HNF----LHSDLALRNCFLTSDLTVKVGDYGIG-PSRYKEDYIETEDDKCVPLRWLAPEL 172
Query: 855 GQS-------GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIE 891
T +V++ GV L EL D E
Sbjct: 173 VGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE 216
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 59.3 bits (143), Expect = 4e-09
Identities = 63/211 (29%), Positives = 92/211 (43%), Gaps = 28/211 (13%)
Query: 686 IIGDGGFGTV----YKAALPDGKTVAVKKLSQ---AKTQGHREFTAEMETLGKVKHQNLV 738
+IG G FG V +K++ K A+K LS+ K F E + + +V
Sbjct: 50 VIGRGAFGEVQLVRHKSS---QKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 106
Query: 739 PLLGYCSFDEEKLL--VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
L +C+F ++K L V EYM G L + N + W K Y A + L
Sbjct: 107 QL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK---WAKFY-----TAEVVLALD 156
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLA-RLISACETHVSTDIAGTFGYIPPEY- 854
+ +IHRD+K N+LL++ K+ADFG ++ T + GT YI PE
Sbjct: 157 AIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAV-GTPDYISPEVL 215
Query: 855 ---GQSGRSTTRGDVYSFGVILLELVTGKEP 882
G G D +S GV L E++ G P
Sbjct: 216 KSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 246
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 4e-09
Identities = 67/205 (32%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 686 IIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHRE---FTAEMETLGK-VKHQNLVPL 740
+IG G FG V A DGK AVK L + +E AE L K VKH LV L
Sbjct: 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGL 61
Query: 741 LGYCSFDE-EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKI-ACGAARGLAFLHHG 798
+ SF EKL VNG + R S + R + A A L +LH
Sbjct: 62 --HYSFQTTEKLYFVLDFVNGGELFFHLQRERSFP----EPRARFYAAEIASALGYLH-- 113
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARL-ISACETHVSTDIAGTFGYIPPEYGQS 857
+ +I++RD+K NILL+ + + DFGL + I+ +T +T GT Y+ PE +
Sbjct: 114 -SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDT--TTTFCGTPEYLAPEVIRK 170
Query: 858 GRSTTRGDVYSFGVILLELVTGKEP 882
D + G +L E++ G P
Sbjct: 171 QPYDNTVDWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 5e-09
Identities = 50/154 (32%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 733 KHQNLVPLLGYCSFDEEKLL--VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKI-ACGAA 789
KH L L +C F + L V EY VNG ++ R+ + + R + A
Sbjct: 54 KHPFLTAL--HCCFQTKDRLFFVMEY-VNGGDLMFQIQRSRKFD----EPRSRFYAAEVT 106
Query: 790 RGLAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFG 848
L FLH HG +I+RD+K NILL+ E K+ADFG+ + +T GT
Sbjct: 107 LALMFLHRHG----VIYRDLKLDNILLDAEGHCKLADFGMCKE-GILNGVTTTTFCGTPD 161
Query: 849 YIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
YI PE Q D ++ GV++ E++ G+ P
Sbjct: 162 YIAPEILQELEYGPSVDWWALGVLMYEMMAGQPP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 5e-09
Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG-TF 847
ARG+ FL + IHRD+ A NILL+E K+ DFGLAR I +V A
Sbjct: 184 ARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPL 240
Query: 848 GYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKG 906
++ PE TT+ DV+SFGV+L E+ + G P G + Q++K G
Sbjct: 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASP-------YPGVQINEEFCQRLKDG 293
Query: 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
P T + +ML C +P RPT +++ L ++
Sbjct: 294 TRMRA--PENATPEIYRIML-------ACWQGDPKERPTFSALVEILGDL 334
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 6e-09
Identities = 53/167 (31%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVST-DIAGTF 847
A+G+ FL + IHRD+ A NILL+E K+ DFGLAR I +V D
Sbjct: 189 AKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 245
Query: 848 GYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKG 906
++ PE T + DV+SFGV+L E+ + G P D E +++K+G
Sbjct: 246 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-------FCRRLKEG 298
Query: 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953
D T + M ML DC P+ RPT +++ L
Sbjct: 299 TRMRAPDYT-----TPEMYQTML----DCWHGEPSQRPTFSELVEHL 336
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 6e-09
Identities = 59/229 (25%), Positives = 96/229 (41%), Gaps = 39/229 (17%)
Query: 686 IIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQG---HREFTAEMETLGKVKHQNLVPLL 741
+IG GG G VY A P + VA+KK+ + ++ + F E + + H +VP+
Sbjct: 9 LIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVY 68
Query: 742 GYCSFDEEKLLVYEYM--VNG-SLDLWLRNRTGSLEVLGWDKRYKIACGA--------AR 790
CS + VY M + G +L L++ E L + K + GA
Sbjct: 69 SICS---DGDPVYYTMPYIEGYTLKSLLKS-VWQKESLSKELAEKTSVGAFLSIFHKICA 124
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH------------ 838
+ ++H + ++HRD+K NILL E + D+G A E
Sbjct: 125 TIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNIC 181
Query: 839 -----VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
+ I GT Y+ PE ++ D+Y+ GVIL +++T P
Sbjct: 182 YSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFP 230
|
Length = 932 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 58.6 bits (141), Expect = 6e-09
Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 687 IGDGGFGTV---YKAALPDGKTVAVKKLS---QAKTQGHREFTAEMETLGKVKHQNLVPL 740
IG G G V Y A L + VA+KKLS Q +T R + E+ + V H+N++ L
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 81
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR-----YKIACGAARGLAFL 795
L F +K L V ++L N +++ +R Y++ CG +
Sbjct: 82 LNV--FTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG-------I 132
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG 855
H + IIHRD+K SNI++ + K+ DFGLAR +A + + T T Y PE
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVI 190
Query: 856 QSGRSTTRGDVYSFGVILLELVTGK 880
D++S G I+ E+V K
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHK 215
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 58.0 bits (140), Expect = 7e-09
Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 14/201 (6%)
Query: 687 IGDGGFGTVYKAALPDGKTV-AVKKLSQAKTQGHREFT---AEMETLGKVKHQNLVPLLG 742
IG G FG V + D + + A+K + +A E T AE L +V +VPL
Sbjct: 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPL-- 58
Query: 743 YCSFDE-EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP 801
SF EKL + +NG R G ++ + A L L +
Sbjct: 59 KFSFQSPEKLYLVLAFINGGELFHHLQREGRFDL------SRARFYTAELLCALENLHKF 112
Query: 802 HIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRST 861
++I+RD+K NILL+ + + DFGL +L + + + GT Y+ PE T
Sbjct: 113 NVIYRDLKPENILLDYQGHIALCDFGLCKL-NMKDDDKTNTFCGTPEYLAPELLLGHGYT 171
Query: 862 TRGDVYSFGVILLELVTGKEP 882
D ++ GV+L E++TG P
Sbjct: 172 KAVDWWTLGVLLYEMLTGLPP 192
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 58.4 bits (141), Expect = 7e-09
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 28/210 (13%)
Query: 687 IGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLV--PLLGY 743
IG G FG VY+ D + A+K LS+ +E A+ E + +N++ LL
Sbjct: 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSK------KEIVAKKEVAHTIGERNILVRTLLDE 54
Query: 744 CSF----------DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLA 793
F D + LV +YM G L W + G + R K A +
Sbjct: 55 SPFIVGLKFSFQTDSDLYLVTDYMSGGEL-FWHLQKEGRFS----EDRAKFYI--AELVL 107
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE 853
L H I++RD+K NILL+ + DFGL++ + + + GT Y+ PE
Sbjct: 108 ALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSK-ANLTDNKTTNTFCGTTEYLAPE 166
Query: 854 YGQSGRSTTRG-DVYSFGVILLELVTGKEP 882
+ T+ D +S GV++ E+ G P
Sbjct: 167 VLLDEKGYTKHVDFWSLGVLVFEMCCGWSP 196
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 8e-09
Identities = 67/205 (32%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 686 IIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGK-VKHQNLVPL 740
+IG G FG V A DG AVK L + K + AE L K +KH LV L
Sbjct: 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGL 61
Query: 741 LGYCSFD-EEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKI-ACGAARGLAFLHH 797
+ SF EKL V +Y+ G L L+ LE R + A A + +LH
Sbjct: 62 --HYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLE-----PRARFYAAEVASAIGYLH- 113
Query: 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQS 857
+ +II+RD+K NILL+ + + DFGL + E ST GT Y+ PE +
Sbjct: 114 --SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTST-FCGTPEYLAPEVLRK 170
Query: 858 GRSTTRGDVYSFGVILLELVTGKEP 882
D + G +L E++ G P
Sbjct: 171 EPYDRTVDWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 2e-08
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFG 848
A GL FLH + II+RD+K N++L+ E K+ADFG+ + + + + GT
Sbjct: 111 AIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NMWDGVTTKTFCGTPD 166
Query: 849 YIPPE---YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKD 889
YI PE Y G+S D ++FGV+L E++ G+ P E +D
Sbjct: 167 YIAPEIIAYQPYGKSV---DWWAFGVLLYEMLAGQAPFEGEDED 207
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 57.0 bits (137), Expect = 2e-08
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 687 IGDGGFGTV---YKAALPDGKTVAVKKLS---QAKTQGHREFTAEMETLGKVKHQNLVPL 740
IG G G V Y A L + VA+KKLS Q +T R + E+ + V H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR-----YKIACGAARGLAFL 795
L F +K L V ++L N +++ +R Y++ CG +
Sbjct: 89 LNV--FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG-------I 139
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG 855
H + IIHRD+K SNI++ + K+ DFGLAR +A + + T T Y PE
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 856 QSGRSTTRGDVYSFGVILLELVTGK 880
D++S G I+ E++ G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGG 222
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Score = 57.0 bits (137), Expect = 2e-08
Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 25/165 (15%)
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF- 847
ARG+ FL + + +HRD+ A N+LL + K+ DFGLAR I +VS TF
Sbjct: 247 ARGMEFLA---SKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSK--GSTFL 301
Query: 848 --GYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF-QKMK 904
++ PE TT DV+S+G++L E+ + P G +V F K+K
Sbjct: 302 PVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYP-------GMIVDSTFYNKIK 354
Query: 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHV 949
G + P T + +M+K C + P RP+ LH+
Sbjct: 355 SGYR--MAKPDHATQEVYDIMVK-------CWNSEPEKRPSFLHL 390
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 3e-08
Identities = 63/204 (30%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 687 IGDGGFGTVYKAALPD-GKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLG 742
+G GG+G V+ A D G+ VA+K++ ++ K R E + L K + LV LL
Sbjct: 9 VGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLL- 67
Query: 743 YCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH-GFT 800
Y D+E L L EY+ G L N G L + Y A + LH G
Sbjct: 68 YAFQDDEYLYLAMEYVPGGDFRTLLNN-LGVLSE-DHARFYMAEMFEA--VDALHELG-- 121
Query: 801 PHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE--YGQSG 858
IHRD+K N L++ K+ DFGL++ I + + G+ Y+ PE G+
Sbjct: 122 --YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----YANSVVGSPDYMAPEVLRGKGY 175
Query: 859 RSTTRGDVYSFGVILLELVTGKEP 882
T D +S G +L E + G P
Sbjct: 176 DFTV--DYWSLGCMLYEFLCGFPP 197
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 4e-08
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 29/137 (21%)
Query: 394 LNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPV 453
L L L G +P L+ L ++LS N + G +P SL +I +L L L +N +G +
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 454 DELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGN-LMQ 512
P SLG L+ L L+L+ N +G +P LG L+
Sbjct: 483 --------------------------PESLGQLTSLRILNLNGNSLSGRVPAALGGRLLH 516
Query: 513 LEYLDVSRNR-LCGQIP 528
+ + N LCG IP
Sbjct: 517 RASFNFTDNAGLCG-IP 532
|
Length = 623 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 4e-08
Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG-TF 847
A+G+ FL + + IHRD+ A N+LL + AK+ DFGLAR I +V A
Sbjct: 222 AQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPV 278
Query: 848 GYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKM-KK 905
++ PE T + DV+S+G++L E+ + GK P P G LV F KM K+
Sbjct: 279 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPY-P-------GILVNSKFYKMVKR 330
Query: 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955
G D P ++ I C + P RPT + + ++
Sbjct: 331 GYQMS-------RPDFAP--PEIYSIMKMCWNLEPTERPTFSQISQLIQR 371
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 8e-08
Identities = 63/229 (27%), Positives = 97/229 (42%), Gaps = 13/229 (5%)
Query: 33 SLPSWLGN-WNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSES 91
+P +G + ++ L LS N+ I +P + N LK++ LS N LS +P+ L +
Sbjct: 130 DIPPLIGLLKSNLKELDLSDNK-IESLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSN 187
Query: 92 LEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTG 151
L +DL GN ++ + E S L +L + N I + LS L + SNN
Sbjct: 188 LNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE 245
Query: 152 IIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEI-GNLSA 210
+P SI N L +NN + S+ G+ L L L+ N L LP L
Sbjct: 246 DLPESIGNLSNLETLDLSNNQIS-SISSL-GSLTNLRELDLSGNSLSNALPLIALLLLLL 303
Query: 211 LSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQL 259
+L+L L EL L ++ +N PE ++ L L
Sbjct: 304 ELLLNLLLTL----KALELKLNSILLNNNILSNGE-TSSPEALSILESL 347
|
Length = 394 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 54.7 bits (131), Expect = 1e-07
Identities = 65/253 (25%), Positives = 105/253 (41%), Gaps = 33/253 (13%)
Query: 686 IIGDGGFGTVY----KAALPDGKTVAVKKLSQ----AKTQGHREFTAEMETLGKVKHQNL 737
++G G FG V KA+ GK A+K L + AK + T E L +H L
Sbjct: 2 LLGKGTFGKVILVREKAS---GKYYAMKILKKEVIIAKDEVAHTLT-ESRVLKNTRHPFL 57
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWL-RNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
L + V EY+ G L L R R V D+ L +LH
Sbjct: 58 TSLKYSFQTKDRLCFVMEYVNGGELFFHLSRER-----VFSEDRTRFYGAEIVSALDYLH 112
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQ 856
G I++RD+K N++L+++ K+ DFGL + + GT Y+ PE +
Sbjct: 113 SG---KIVYRDLKLENLMLDKDGHIKITDFGLCKE-GITDAATMKTFCGTPEYLAPEVLE 168
Query: 857 SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916
D + GV++ E++ G+ P F + + L + + D+ P
Sbjct: 169 DNDYGRAVDWWGLGVVMYEMMCGRLP----FYNQDHEKLFELILME-------DIKFPRT 217
Query: 917 LTADSKPMMLKML 929
L+AD+K ++ +L
Sbjct: 218 LSADAKSLLSGLL 230
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 1e-07
Identities = 23/59 (38%), Positives = 30/59 (50%)
Query: 211 LSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNL 269
L LDL++N I +L LDL NNL+ + PE + L L+ L LS NNL
Sbjct: 2 LKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 1e-07
Identities = 72/263 (27%), Positives = 109/263 (41%), Gaps = 45/263 (17%)
Query: 686 IIGDGGFGTV----YKAALPDGKTVAVKKLSQ---AKTQGHREFTAEMETLGKVKHQNLV 738
+IG G FG V +K+ K A+K LS+ K F E + + +V
Sbjct: 50 VIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 106
Query: 739 PLLGYCSFDEEKLL--VYEYMVNGSLDLWLRNRTGSLEVLG-WDKRYK----IACGAARG 791
L + +F +++ L V EYM G L N + +V W + Y +A A
Sbjct: 107 QL--FYAFQDDRYLYMVMEYMPGGDL----VNLMSNYDVPEKWARFYTAEVVLALDAIHS 160
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIA-GTFGYI 850
+ F IHRD+K N+LL++ K+ADFG ++ E V D A GT YI
Sbjct: 161 MGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTPDYI 210
Query: 851 PPEY----GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906
PE G G D +S GV L E++ G P +LVG + M
Sbjct: 211 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP-------FYADSLVGTYSKIMNHK 263
Query: 907 QAADVLDPTVLTADSKPMMLKML 929
+ D ++ ++K ++ L
Sbjct: 264 NSLTFPDDNDISKEAKNLICAFL 286
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 2e-07
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 45/232 (19%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKT-VAVKKLSQA----KTQGHREFTAEMETLGKVK 733
+F +I +G +G VY + + A+KK+++ + Q + F E + L +
Sbjct: 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVF-VERDILTFAE 59
Query: 734 HQNLVPLLGYCSFDEEKLL--VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARG 791
+ +V + +CSF+ ++ L V EY+ G L+N G+L V D
Sbjct: 60 NPFVVSM--FCSFETKRHLCMVMEYVEGGDCATLLKN-IGALPV---DMARMYFAETVLA 113
Query: 792 LAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR--LISAC----ETHVSTD-- 842
L +LH +G I+HRD+K N+L+ K+ DFGL++ L+S E H+ D
Sbjct: 114 LEYLHNYG----IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTR 169
Query: 843 ------IAGTFGYIPPE------YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
+ GT YI PE YG+ D ++ G+IL E + G P
Sbjct: 170 EFLDKQVCGTPEYIAPEVILRQGYGKP------VDWWAMGIILYEFLVGCVP 215
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 3e-07
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 28/204 (13%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVK-HQNLVPLLG 742
IG+G F V KA + GK A+K + + + + E++ L ++ H N++ L+
Sbjct: 7 IGEGTFSEVLKAQSRKTGKYYAIKCMKK-HFKSLEQVNNLREIQALRRLSPHPNILRLIE 65
Query: 743 YCSFDEE--KL-LVYEYMVNGSLDLWLRNRT---GSLEVLGWDKRYKIACGAARGLAFLH 796
FD + +L LV+E M + +L ++ R V + Y++ L +H
Sbjct: 66 -VLFDRKTGRLALVFELM-DMNLYELIKGRKRPLPEKRVKSY--MYQLLKS----LDHMH 117
Query: 797 -HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE-Y 854
+G I HRDIK NIL+ ++ K+ADFG R T+ T Y PE
Sbjct: 118 RNG----IFHRDIKPENILIKDD-ILKLADFGSCR--GIYSKPPYTEYISTRWYRAPECL 170
Query: 855 GQSGRSTTRGDVYSFGVILLELVT 878
G + D+++ G + E+++
Sbjct: 171 LTDGYYGPKMDIWAVGCVFFEILS 194
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 3e-07
Identities = 64/218 (29%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKK-------LSQAKTQGHREFTAEMETLGK 731
++F +IG G FG V + + + K L +A+T RE E L
Sbjct: 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFRE---ERNVLVN 57
Query: 732 VKHQNLVPLLGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSL-EVLGWDKRYKIACGAA 789
Q + L Y DE L LV +Y V G L L L E + R+ IA
Sbjct: 58 GDCQ-WITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMA---RFYIA---- 109
Query: 790 RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGY 849
+ +H H +HRDIK N+LL+ ++ADFG ++ T S+ GT Y
Sbjct: 110 EMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDY 169
Query: 850 IPPEYGQS-----GRSTTRGDVYSFGVILLELVTGKEP 882
I PE Q+ G+ D +S GV + E++ G+ P
Sbjct: 170 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 3e-07
Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 29/213 (13%)
Query: 686 IIGDGGFGTVYKAALPD-GKTVAVK------KLSQAKTQGHREFTAEMETLGKVKHQNLV 738
+IG G FG V + + G+ A+K L +A+T RE E + L + +
Sbjct: 8 VIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFRE---ERDVLVNGDRR-WI 63
Query: 739 PLLGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWD-KRYKIA--CGAARGLAF 794
L Y DE L LV +Y V G L L L ++ + L D R+ +A A +
Sbjct: 64 TNLHYAFQDENNLYLVMDYYVGGDL-LTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQ 120
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY 854
L + +HRDIK N+LL++ ++ADFG + A T S GT YI PE
Sbjct: 121 LGY------VHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEI 174
Query: 855 GQS-----GRSTTRGDVYSFGVILLELVTGKEP 882
Q+ GR D +S GV + E++ G+ P
Sbjct: 175 LQAMEDGKGRYGPECDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 3e-07
Identities = 64/214 (29%), Positives = 88/214 (41%), Gaps = 31/214 (14%)
Query: 686 IIGDGGFGTVYKAALPDGKTVAVKK-------LSQAKTQGHREFTAEMETLGKVKHQN-L 737
+IG G FG V L + V K L +A+T RE E + L V N
Sbjct: 8 VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFRE---ERDVL--VNGDNQW 62
Query: 738 VPLLGYCSFDEEKL-LVYEYMVNGSLDLWL---RNRTGSLEVLGWDKRYKIACGAARGLA 793
+ L Y DE L LV +Y V G L L +R + IA + L
Sbjct: 63 ITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL- 121
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE 853
H +HRDIK NIL++ ++ADFG + T S+ GT YI PE
Sbjct: 122 --------HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPE 173
Query: 854 YGQS-----GRSTTRGDVYSFGVILLELVTGKEP 882
Q+ G+ D +S GV + E++ G+ P
Sbjct: 174 ILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 4e-07
Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 51/252 (20%)
Query: 719 HREFT-AEMET---LGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLE 774
HR+ A ET + +V H +L + G C E ++V E++ +G LD+ LR G +
Sbjct: 56 HRDIALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVP 115
Query: 775 VLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL-------NEEFEAKVADFG 827
V W + +A A L++L +++H ++ A NILL K++D G
Sbjct: 116 V-AW--KITVAQQLASALSYLED---KNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPG 169
Query: 828 LARLISACETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLEL-----VTGKE 881
++ + E V +I PE G S +T D +SFG LLE+ V KE
Sbjct: 170 VSFTALSREERVE-----RIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKE 224
Query: 882 PTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPA 941
T E + ++K + +P ++ + CL+ P
Sbjct: 225 RTPSEKERF---------YEKKHRLP--------------EPSCKELATLISQCLTYEPT 261
Query: 942 MRPTMLHVLKFL 953
RP+ +L+ L
Sbjct: 262 QRPSFRTILRDL 273
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 4e-07
Identities = 65/211 (30%), Positives = 91/211 (43%), Gaps = 17/211 (8%)
Query: 684 TNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLL 741
IG G +G V+K +G AVK L E AE L + H N+V
Sbjct: 23 IETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI-DEEIEAEYNILKALSDHPNVVKFY 81
Query: 742 G-YCSFD----EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
G Y D ++ LV E GS+ ++ E + I A GL LH
Sbjct: 82 GMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH 141
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY-- 854
T IHRD+K +NILL E K+ DFG++ +++ +T + GT ++ PE
Sbjct: 142 VNKT---IHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSV-GTPFWMAPEVIA 197
Query: 855 -GQSGRST--TRGDVYSFGVILLELVTGKEP 882
Q ST R DV+S G+ +EL G P
Sbjct: 198 CEQQLDSTYDARCDVWSLGITAIELGDGDPP 228
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 5e-07
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 687 IGDGGFGTVYKAA---LPDG----KTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQNLV 738
+G G F ++K + D KT + K+ + + E F + ++ H++LV
Sbjct: 3 LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62
Query: 739 PLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAF-LHH 797
G C +E ++V EY+ GSLD +L+ + + +K+ A+ LA+ LH
Sbjct: 63 LNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINIS-----WKLE--VAKQLAWALHF 115
Query: 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLARL----ISACETHVSTDI-AGTFGYIPP 852
+ H ++ A N+LL E + K + +L IS T + +I ++PP
Sbjct: 116 LEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI--TVLPKEILLERIPWVPP 173
Query: 853 EYGQSGRS-TTRGDVYSFGVILLELVTG 879
E ++ ++ + D +SFG L E+ +G
Sbjct: 174 ECIENPQNLSLAADKWSFGTTLWEIFSG 201
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 6e-07
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG-TF 847
A+G++FL + + IHRD+ A NILL K+ DFGLAR I +V A
Sbjct: 224 AKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPV 280
Query: 848 GYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKG 906
++ PE + T DV+S+G++L E+ + G P G V F KM K
Sbjct: 281 KWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPY--------PGMPVDSKFYKMIK- 331
Query: 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955
+ +L P + P +M I C +P RPT +++ +++
Sbjct: 332 EGYRMLSP-----ECAP--SEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375 |
| >gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 7e-07
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF- 847
A G+ FL + + +HRD+ A N+L+ E K+ DFGLAR I ++S TF
Sbjct: 249 ANGMEFLA---SKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISK--GSTFL 303
Query: 848 --GYIPPEYGQSGRSTTRGDVYSFGVILLELVT 878
++ PE + TT DV+SFG++L E+ T
Sbjct: 304 PLKWMAPESIFNNLYTTLSDVWSFGILLWEIFT 336
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 8e-07
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 7 LSGSLPEELSDLPIL-TFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNC 65
L G +P ++S L L + N + G++P LG+ +E L LS N F G IP +G
Sbjct: 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQL 489
Query: 66 SMLKSISLSNNFLSGSIPREL 86
+ L+ ++L+ N LSG +P L
Sbjct: 490 TSLRILNLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 9e-07
Identities = 71/258 (27%), Positives = 99/258 (38%), Gaps = 73/258 (28%)
Query: 681 FCKTNIIGDGGFGTVYKAALPDGKTV-AVKKLSQA----KTQ-GHREFTAEMETLGKVKH 734
F K IG G FG V D + A+K L +A + Q H AE + L + +
Sbjct: 3 FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAH--VKAERDILAEADN 60
Query: 735 QNLVPLLGYCSF-DEEKL-LVYEYMVNGSL-DLWLRNRTGSLEVLGWD-KRYKIACGAAR 790
+ +V L Y SF D++ L V +Y+ G + L +R L + D R+ IA
Sbjct: 61 EWVVKL--YYSFQDKDNLYFVMDYIPGGDMMSLLIR-----LGIFEEDLARFYIA-ELTC 112
Query: 791 GLAFLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGL--------------------- 828
+ +H GF IHRDIK NIL++ + K+ DFGL
Sbjct: 113 AIESVHKMGF----IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQ 168
Query: 829 ------------------------ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRG 864
R C H + GT YI PE T
Sbjct: 169 DSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAH---SLVGTPNYIAPEVLLRTGYTQLC 225
Query: 865 DVYSFGVILLELVTGKEP 882
D +S GVIL E++ G+ P
Sbjct: 226 DWWSVGVILYEMLVGQPP 243
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 1e-06
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 39 GNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLD 98
G W ++ L L + G IP +I L+SI+LS N + G+IP L + SLE +DL
Sbjct: 416 GKW-FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLS 474
Query: 99 GNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPL 139
N G+I + ++L L + N + G +P L L
Sbjct: 475 YNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLL 515
|
Length = 623 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 1e-06
Identities = 59/202 (29%), Positives = 86/202 (42%), Gaps = 13/202 (6%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQA---KTQGHREFTAEMETLGK-VKHQNLVPL 740
+IG G FG V A + K AVK L + K + + +E L K VKH LV L
Sbjct: 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 61
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT 800
++ V +Y+ G L L+ LE + A A L +LH +
Sbjct: 62 HFSFQTADKLYFVLDYINGGELFYHLQRERCFLE----PRARFYAAEIASALGYLH---S 114
Query: 801 PHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRS 860
+I++RD+K NILL+ + + DFGL + ST GT Y+ PE
Sbjct: 115 LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTST-FCGTPEYLAPEVLHKQPY 173
Query: 861 TTRGDVYSFGVILLELVTGKEP 882
D + G +L E++ G P
Sbjct: 174 DRTVDWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 46.0 bits (110), Expect = 2e-06
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 390 GLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKL 449
L L+L+ N+L+ +F L L LDLS N L P + S + +L L L N L
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 2e-06
Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 26/188 (13%)
Query: 702 DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGS 761
K V VK ++ KT G E++ L + H+ ++ L+ + K V M
Sbjct: 118 QRKKVIVKAVTGGKTPG-----REIDILKTISHRAIINLIHAYRW---KSTVCMVMPKYK 169
Query: 762 LDLWLR-NRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE 820
DL+ +R+G L + ++ I LA+LH IIHRD+K NI L+E
Sbjct: 170 CDLFTYVDRSGPLPL---EQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPEN 223
Query: 821 AKVADFGLARLISACETHVSTDI------AGTFGYIPPEYGQSGRSTTRGDVYSFGVILL 874
A + DFG +AC+ D +GT PE + D++S G++L
Sbjct: 224 AVLGDFG-----AACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLF 278
Query: 875 ELVTGKEP 882
E+
Sbjct: 279 EMSVKNVT 286
|
Length = 392 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 3e-06
Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 11/166 (6%)
Query: 718 GHREFTA-EMETLGKVKHQNLVPLLGYCSFDEEKLLVY-EYMVNGSLDLWLRNRTGSLEV 775
G R TA E L + H +++ L G ++++ L+ Y + L + ++
Sbjct: 125 GQRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYKTDLYCYLAAKRNIAICDI 184
Query: 776 LGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835
L I R + +LH IIHRDIKA NI +N + + DFG A
Sbjct: 185 LA------IERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI 235
Query: 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKE 881
+ AGT PE D++S G++L E+ T +
Sbjct: 236 NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHD 281
|
Length = 391 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 5e-06
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 128 GSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAA 186
G IP +SKL L ++L N+ G IP S+ + +L + N GS+P +G +
Sbjct: 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTS 491
Query: 187 LERLVLTNNMLKGHLPKEIG 206
L L L N L G +P +G
Sbjct: 492 LRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 6e-06
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 20/99 (20%)
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL-ISACETHVSTDIAGTFGYI 850
L FLH II+RD+K N+LL+ E K+ D+G+ + I +T ++ GT YI
Sbjct: 109 LNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDT--TSTFCGTPNYI 163
Query: 851 PPEYGQSGRSTTRGDVYSF-------GVILLELVTGKEP 882
PE RG+ Y F GV++ E++ G+ P
Sbjct: 164 APE-------ILRGEDYGFSVDWWALGVLMFEMMAGRSP 195
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 7e-06
Identities = 65/250 (26%), Positives = 90/250 (36%), Gaps = 69/250 (27%)
Query: 681 FCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLS----QAKTQGHREFTAEMETLGKVKHQ 735
F K ++G G G V+ L GK A+K L + + R T E E L + H
Sbjct: 3 FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLT-EQEILATLDHP 61
Query: 736 NLVPLLGYCSFDEEK--LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAAR--- 790
L L Y SF E LV +Y G L L+ + G K AR
Sbjct: 62 FLPTL--YASFQTETYLCLVMDYCPGGELFRLLQRQPG--------KCLSEE--VARFYA 109
Query: 791 -----GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV------ 839
L +LH I++RD+K NILL+E ++DF L++ S E
Sbjct: 110 AEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQ-SDVEPPPVSKALR 165
Query: 840 -----------------------STDIAGTFGYIPPE----YGQSGRSTTRGDVYSFGVI 872
S GT YI PE G D ++ G++
Sbjct: 166 KGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAV----DWWTLGIL 221
Query: 873 LLELVTGKEP 882
L E++ G P
Sbjct: 222 LYEMLYGTTP 231
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 42.5 bits (101), Expect = 2e-05
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 187 LERLVLTNNMLKGHLPKEI-GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNL 245
L+ L L+NN L +P L L VLDL+ N I P SL +LDL NNL
Sbjct: 2 LKSLDLSNNRLT-VIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 2e-05
Identities = 61/214 (28%), Positives = 91/214 (42%), Gaps = 38/214 (17%)
Query: 686 IIGDGGFGTVY----KAALPDGKTVAVKKLSQ----AKTQGHREFTAEMETLGKVKHQNL 737
++G G FG V KA GK A+K L + AK + T E L +H L
Sbjct: 2 LLGKGTFGKVILVREKAT---GKYYAMKILKKEVIIAKDEVAHTLT-ESRVLQNTRHPFL 57
Query: 738 VPLLGYCSFDEEKLL--VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL 795
L Y SF L V EY NG + +R V D+ L +L
Sbjct: 58 TAL-KY-SFQTHDRLCFVMEY-ANGGELFFHLSRER---VFSEDRARFYGAEIVSALGYL 111
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL-ISACETHVSTDIAGTFGYIPPE- 853
H +++RD+K N++L+++ K+ DFGL + IS T GT Y+ PE
Sbjct: 112 HSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEV 166
Query: 854 -----YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
YG++ D + GV++ E++ G+ P
Sbjct: 167 LEDNDYGRA------VDWWGLGVVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 2e-05
Identities = 62/278 (22%), Positives = 92/278 (33%), Gaps = 46/278 (16%)
Query: 66 SMLKSISLSNNFLSGS----IPRELCTSESLEEIDLDGNLLTGTIEGV------FEKCSN 115
L+ + L N L + L SL+E+ L N G+ K
Sbjct: 23 LCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82
Query: 116 LSQLVIFRN----HIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIW------NSETLME 165
L +L + N G + L L L L +NN G + + L +
Sbjct: 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKL-NNNGLGDRGLRLLAKGLKDLPPALEK 141
Query: 166 FSAANNLLEGSLPYEVGNAA----ALERLVLTNNMLKG----HLPKEIGNLSALSVLDLN 217
N LEG+ + A L+ L L NN + L + + L VLDLN
Sbjct: 142 LVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLN 201
Query: 218 SNLF----DGIIPYELGDCISLTTLDLGNNNLSGLIPEKIAD-----LAQLQCLVLSHNN 268
+N + L SL L+LG+NNL+ +A L L LS N+
Sbjct: 202 NNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCND 261
Query: 269 LSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLS 306
++ + A L DL N+
Sbjct: 262 ITDDGAKDLAEV--LAEKESLLE------LDLRGNKFG 291
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319 |
| >gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 2e-05
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 25/182 (13%)
Query: 708 VKKLSQAKTQGHREFT-AEMET---LGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLD 763
+K + + HR+ + A ET + +V H+++V L G C D E ++V E++ G LD
Sbjct: 33 IKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLD 92
Query: 764 LWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE----- 818
L++ ++ +VL ++K+A A L++L ++H ++ NILL E
Sbjct: 93 LFMHRKS---DVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGE 146
Query: 819 ---FEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILL 874
F K++D G+ + + + V +I PE + ++ + D +SFG L
Sbjct: 147 CGPF-IKLSDPGIPITVLSRQECVE-----RIPWIAPECVEDSKNLSIAADKWSFGTTLW 200
Query: 875 EL 876
E+
Sbjct: 201 EI 202
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 2e-05
Identities = 47/154 (30%), Positives = 68/154 (44%), Gaps = 21/154 (13%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQA----KTQGHREFTAEMETLGKVKHQNLVPLL 741
I G FG VY + K AVK + +A K H + AE + L K +V L
Sbjct: 12 ISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVH-QVQAERDALALSKSPFIVHLY 70
Query: 742 GYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGW---DKRYKIACGAARGLAFLH-H 797
LV EY++ G + L + G+ + K A L +LH H
Sbjct: 71 YSLQSANNVYLVMEYLIGGDV-------KSLLHIYGYFDEEMAVKYISEVALALDYLHRH 123
Query: 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831
G IIHRD+K N+L++ E K+ DFGL+++
Sbjct: 124 G----IIHRDLKPDNMLISNEGHIKLTDFGLSKV 153
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 2e-05
Identities = 54/206 (26%), Positives = 86/206 (41%), Gaps = 22/206 (10%)
Query: 686 IIGDGGFGTVY----KAALPDGKTVAVKKLSQ----AKTQGHREFTAEMETLGKVKHQNL 737
++G G FG V KA G+ A+K L + AK + T E L +H L
Sbjct: 2 LLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHPFL 57
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWL-RNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
L + V EY G L L R R V ++ L +LH
Sbjct: 58 TALKYAFQTHDRLCFVMEYANGGELFFHLSRER-----VFTEERARFYGAEIVSALEYLH 112
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQ 856
+ +++RDIK N++L+++ K+ DFGL + + + T GT Y+ PE +
Sbjct: 113 ---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLE 168
Query: 857 SGRSTTRGDVYSFGVILLELVTGKEP 882
D + GV++ E++ G+ P
Sbjct: 169 DNDYGRAVDWWGLGVVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 2e-05
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL-ISACETHVSTDIAGTFGY 849
L FLH II+RD+K N+LL+ + K+ D+G+ + + +T ++ GT Y
Sbjct: 108 ALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT--TSTFCGTPNY 162
Query: 850 IPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
I PE + D ++ GV++ E++ G+ P
Sbjct: 163 IAPEILRGEEYGFSVDWWALGVLMFEMMAGRSP 195
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 3e-05
Identities = 62/224 (27%), Positives = 92/224 (41%), Gaps = 15/224 (6%)
Query: 2 LSFNALSGSLPEELSDLPILTF-AAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
LS N + SLP L +LP L N LS LP L N + + +L LS N+ I +PP
Sbjct: 147 LSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNK-ISDLPP 203
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
EI S L+ + LSNN + + L ++L ++L N L E + SNL L
Sbjct: 204 EIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDLPESI-GNLSNLETLD 261
Query: 121 IFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSI--WNSETLMEFSAANNLLEGSLP 178
N+ SI S L LDL N+ + +P+ L+
Sbjct: 262 -LSNNQISSISSLGSLTNLRELDLSGNSLSNALPLIALLLLLLELLLNLLLTL-----KA 315
Query: 179 YEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFD 222
E+ + L + +N P+ + L +L+ L N D
Sbjct: 316 LELKLNSILLNNNILSNGE-TSSPEALSILESLNNLWTLDNALD 358
|
Length = 394 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 3e-05
Identities = 51/219 (23%), Positives = 83/219 (37%), Gaps = 30/219 (13%)
Query: 688 GDGGFGTVYKAALPDGKTVAVKK--LSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS 745
D + K P VAVKK L + + E+ T +++H N++P +
Sbjct: 11 EDLMIVHLAKHK-PTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFI 69
Query: 746 FDEEKLLVYEYMVNGSLDLWLRNR--TGSLEVLGWDKRYKIAC---GAARGLAFLHHGFT 800
D E +V M GS + L+ G E+ IA L ++H
Sbjct: 70 VDSELYVVSPLMAYGSCEDLLKTHFPEGLPELA-------IAFILKDVLNALDYIHSK-- 120
Query: 801 PHIIHRDIKASNILLNEEFEAKVADFGLAR-LISACETHVSTDIAGTFG-----YIPPEY 854
IHR +KAS+ILL+ + + ++ + +I + ++ PE
Sbjct: 121 -GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEV 179
Query: 855 GQSGRS--TTRGDVYSFGVILLELVTGKEPTGPEFKDIE 891
Q + D+YS G+ EL G P FKD+
Sbjct: 180 LQQNLQGYNEKSDIYSVGITACELANGHVP----FKDMP 214
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 3e-05
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 803 IIHRDIKASNILLNEEFEAKVADFGLARLISAC-ETHVSTDIAGTFGYIPPEYGQSGRST 861
IIHRDIK N+L+N + + DFG A T IAGT PE T
Sbjct: 281 IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYT 340
Query: 862 TRGDVYSFGVILLE 875
D++S G+++ E
Sbjct: 341 PSVDIWSAGLVIFE 354
|
Length = 461 |
| >gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 3e-05
Identities = 49/160 (30%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 679 NNFCKTNIIGDGGFGTV-YKAALPDGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKH 734
+F +IG G FG V GK A+K L ++ K AE + L +
Sbjct: 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDS 60
Query: 735 QNLVPLLGYCSFDEEKLL--VYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIA-CGAAR 790
+V L Y SF + + L + E++ G L + ++ T S +V R+ +A C A
Sbjct: 61 PWVVSL--YYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDV----TRFYMAECVLA- 113
Query: 791 GLAFLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829
+ +H GF IHRDIK NIL++ K++DFGL+
Sbjct: 114 -IEAVHKLGF----IHRDIKPDNILIDRGGHIKLSDFGLS 148
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 5e-05
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 24/84 (28%)
Query: 342 NLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKL 401
NL +LDLS N+LT IP + L L L+L+GN L
Sbjct: 1 NLKSLDLSNNRLTV-IPDG-----------------------AFKGLPNLKVLDLSGNNL 36
Query: 402 SGKVPTSFGNLKELTHLDLSFNEL 425
+ P +F L L LDLS N L
Sbjct: 37 TSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 7e-05
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 803 IIHRDIKASNILLNEEFEAKVADFGLARL-ISACETHVSTDIAGTFGYIPPEYGQSGRST 861
II+RD+K N+LL+ E K+ D+G+ + + +T ++ GT YI PE +
Sbjct: 117 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAPEILRGEDYG 174
Query: 862 TRGDVYSFGVILLELVTGKEP 882
D ++ GV++ E++ G+ P
Sbjct: 175 FSVDWWALGVLMFEMMAGRSP 195
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 1e-04
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 402 SGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSA 461
S + NL L LDL+ N L S L + NL L L +N ++ + +
Sbjct: 82 SLDGSENLLNLLPLPSLDLNLNRLRS-NISELLELTNLTSLDLDNNNITDIPPLIGLLKS 140
Query: 462 AWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRN 521
+ +++S+N LP L NL L NLDL N + ++P L NL L LD+S N
Sbjct: 141 --NLKELDLSDNKI-ESLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGN 196
Query: 522 RLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNK 569
++ +P + LS L L L+ N + ++ +NLS + L+ NK
Sbjct: 197 KI-SDLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNK 243
|
Length = 394 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 2e-04
Identities = 23/56 (41%), Positives = 27/56 (48%)
Query: 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQL 377
L L+NN L+ G+ L NL LDLS N LT P F L+ L L N L
Sbjct: 5 LDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 3e-04
Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 21/206 (10%)
Query: 686 IIGDGGFGTVY----KAALPDGKTVAVKKLSQ----AKTQGHREFTAEMETLGKVKHQNL 737
++G G FG V KA G+ A+K L + AK + T E L +H L
Sbjct: 2 LLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLT-ENRVLQNSRHPFL 57
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWL-RNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
L + V EY G L L R R V D+ L +LH
Sbjct: 58 TALKYSFQTHDRLCFVMEYANGGELFFHLSRER-----VFSEDRARFYGAEIVSALDYLH 112
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQ 856
++++RD+K N++L+++ K+ DFGL + + T GT Y+ PE +
Sbjct: 113 S--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLE 169
Query: 857 SGRSTTRGDVYSFGVILLELVTGKEP 882
D + GV++ E++ G+ P
Sbjct: 170 DNDYGRAVDWWGLGVVMYEMMCGRLP 195
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 4e-04
Identities = 78/302 (25%), Positives = 117/302 (38%), Gaps = 71/302 (23%)
Query: 681 FCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFT---AEMETLGKVKHQN 736
F K +G G FG V A D A+K L + + AE + L + ++
Sbjct: 3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEW 62
Query: 737 LVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSL-EVLGWDKRYKIACGAARGLA 793
+V L Y SF D++ L V +Y+ G + + L R EVL R+ IA +
Sbjct: 63 VVKL--YYSFQDKDNLYFVMDYIPGGDM-MSLLIRMEVFPEVLA---RFYIA-ELTLAIE 115
Query: 794 FLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGLA----------------------- 829
+H GF IHRDIK NIL++ + K+ DFGL
Sbjct: 116 SVHKMGF----IHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSM 171
Query: 830 ----------------RLIS----ACETH---VSTDIAGTFGYIPPEYGQSGRSTTRGDV 866
RL + A + H ++ + GT YI PE T D
Sbjct: 172 EPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDW 231
Query: 867 YSFGVILLELVTGK------EPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTAD 920
+S GVIL E++ G+ PT + K I N + Q +A D++ +A+
Sbjct: 232 WSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAE 291
Query: 921 SK 922
+
Sbjct: 292 ER 293
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 4e-04
Identities = 55/280 (19%), Positives = 105/280 (37%), Gaps = 60/280 (21%)
Query: 695 VYKAALPDGKTVAVKKLSQAKTQGH----REFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750
+YK + K V ++ + GH E++ L ++ N++ + G+ +
Sbjct: 36 IYKGIF-NNKEVIIRTFKKFHK-GHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDD 93
Query: 751 L----LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF-TPHIIH 805
L L+ EY G L L + L + + +A +GL L+ P+
Sbjct: 94 LPRLSLILEYCTRGYLREVLDKE----KDLSFKTKLDMAIDCCKGLYNLYKYTNKPY--- 146
Query: 806 RDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP--------EYGQS 857
+++ + + L+ E ++ K+ GL +++S+ + Y EY
Sbjct: 147 KNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMV----YFSYKMLNDIFSEY--- 199
Query: 858 GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917
T + D+YS GV+L E+ TGK P F+ + ++ D +
Sbjct: 200 ---TIKDDIYSLGVVLWEIFTGKIP-----------------FENL---TTKEIYDLIIN 236
Query: 918 TADSKPMMLKMLR----IAGDCLSDNPAMRPTMLHVLKFL 953
+S + L I C S + RP + +L L
Sbjct: 237 KNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNL 276
|
Length = 283 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 4e-04
Identities = 69/259 (26%), Positives = 95/259 (36%), Gaps = 71/259 (27%)
Query: 681 FCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHR----EFTAEMETLGKVKHQN 736
F K +G G FG V A D K + K + K R AE + L + ++
Sbjct: 3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEW 62
Query: 737 LVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSL-EVLGWDKRYKIACGAARGLA 793
+V L Y SF D++ L V +Y+ G + + L R G E L ++ C
Sbjct: 63 VVRL--YYSFQDKDNLYFVMDYIPGGDM-MSLLIRMGIFPEDLARFYIAELTCAVES--- 116
Query: 794 FLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGL------------------------ 828
+H GF IHRDIK NIL++ + K+ DFGL
Sbjct: 117 -VHKMGF----IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSM 171
Query: 829 -------------------------ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTR 863
AR C H + GT YI PE T
Sbjct: 172 DFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAH---SLVGTPNYIAPEVLLRTGYTQL 228
Query: 864 GDVYSFGVILLELVTGKEP 882
D +S GVIL E++ G+ P
Sbjct: 229 CDWWSVGVILYEMLVGQPP 247
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 42.5 bits (101), Expect = 5e-04
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 32/149 (21%)
Query: 791 GLAFLH-HGFTPHIIHRDIKASNILLNE-EFEAKVADFGLARLISACETHVSTDIAGTFG 848
L LH H +IIH DIK N+L + + + D+GL ++I + D GT
Sbjct: 121 ALNDLHKH----NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCY---D--GTLD 171
Query: 849 YIPPEYGQSGRSTTRGDVY--SF-----GVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901
Y PE +G Y SF GV+ EL+TGK P FK+ E L +
Sbjct: 172 YFSPE-------KIKGHNYDVSFDWWAVGVLTYELLTGKHP----FKEDEDEEL---DLE 217
Query: 902 KMKKGQAADVLDPTVLTADSKPMMLKMLR 930
+ K Q + ++ ++ + ML+
Sbjct: 218 SLLKRQQKKLPFIKNVSKNANDFVQSMLK 246
|
Length = 267 |
| >gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 9e-04
Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 31/155 (20%)
Query: 784 IACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDI 843
I GA RGL +LH IHR+IKAS+IL++ + V+ GL+ L S +
Sbjct: 106 ILFGALRGLNYLHQN---GYIHRNIKASHILISG--DGLVSLSGLSHLYSLVRNGQKAKV 160
Query: 844 AGTF--------GYIPPE------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKD 889
F ++ PE YG + +S D+YS G+ EL TG+ P F+D
Sbjct: 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKS----DIYSVGITACELATGRVP----FQD 212
Query: 890 IEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPM 924
+ + + QK+ KG LD T + M
Sbjct: 213 MLRTQM---LLQKL-KGPPYSPLDITTFPCEESRM 243
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 0.001
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 687 IGDGGFGTVYKAAL------PDGKTVAVKKLSQAKTQG-HREFTAEMETLGKVKHQ-NLV 738
+G G FG V +A+ +TVAVK L + T ++ E++ L + H N+V
Sbjct: 15 LGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVV 74
Query: 739 PLLGYCSFDEEKLLV-YEYMVNGSLDLWLRNR 769
LLG C+ L+V EY G+L +LR++
Sbjct: 75 NLLGACTKPGGPLMVIVEYCKFGNLSNYLRSK 106
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 0.001
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 679 NNFCKTNIIGDGGFG-----TVYKAALPDGK-TVAVKKLSQAKTQGHRE-FTAEMETLGK 731
N +G G FG T Y D TVAVK L + RE +E++ L
Sbjct: 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 94
Query: 732 V-KHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSL 773
+ H N+V LLG C+ L++ EY G L +LR + S
Sbjct: 95 LGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSF 137
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 0.001
Identities = 69/251 (27%), Positives = 104/251 (41%), Gaps = 65/251 (25%)
Query: 680 NFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQA----KTQ-GH----REFTAEMETL 729
+F +IG G FG V D G A+K L +A K Q GH R+ E ++L
Sbjct: 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSL 61
Query: 730 GKVKHQNLVPLLGYCSFDEEKL-LVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACG 787
VK + Y D+ L L+ E++ G + L ++ T + E + ++ IA
Sbjct: 62 WVVK-------MFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEE----ETQFYIA-E 109
Query: 788 AARGLAFLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGLAR-LISACET-------- 837
+ +H GF IHRDIK N+LL+ + K++DFGL L A T
Sbjct: 110 TVLAIDSIHQLGF----IHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNH 165
Query: 838 -------------------------HVSTDIAGTFGYIPPE-YGQSGRSTTRGDVYSFGV 871
++ GT YI PE + Q+G + D +S GV
Sbjct: 166 SLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKL-CDWWSLGV 224
Query: 872 ILLELVTGKEP 882
I+ E++ G P
Sbjct: 225 IMYEMLIGYPP 235
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 32/148 (21%), Positives = 56/148 (37%), Gaps = 16/148 (10%)
Query: 686 IIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNL-VP-LLGY 743
++ G VY D +K + RE E+ L + + L VP +L
Sbjct: 5 LLKGGLTNRVYLLGTKDED-YVLKINPSREKGADRE--REVAILQLLARKGLPVPKVLAS 61
Query: 744 CSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHI 803
D L+ E+ + G +L+ + +++ IA A LA LH +
Sbjct: 62 GESDGWSYLLMEW-IEGE----------TLDEVSEEEKEDIAEQLAELLAKLHQLPLLVL 110
Query: 804 IHRDIKASNILLNEEFEAKVADFGLARL 831
H D+ NIL+++ + D+ A
Sbjct: 111 CHGDLHPGNILVDDGKILGIIDWEYAGY 138
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 0.001
Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 53/246 (21%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFT---AEMETLGKVKH 734
++F +IG G FG V D G A+K L +A + AE + L +
Sbjct: 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG 60
Query: 735 QNLVPLLGYCSFDEEK--LLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAARG 791
+V + + SF +++ L+ E++ G + L ++ T S E ++ IA
Sbjct: 61 AWVVKM--FYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEE----ATQFYIAETVLAI 114
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE--------TH----- 838
A GF IHRDIK N+LL+ + K++DFGL + TH
Sbjct: 115 DAIHQLGF----IHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSD 170
Query: 839 ---------------------VSTDIAGTFGYIPPE-YGQSGRSTTRGDVYSFGVILLEL 876
++ GT YI PE + Q+G + D +S GVI+ E+
Sbjct: 171 FSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKL-CDWWSLGVIMYEM 229
Query: 877 VTGKEP 882
+ G P
Sbjct: 230 LIGYPP 235
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.002
Identities = 77/344 (22%), Positives = 110/344 (31%), Gaps = 92/344 (26%)
Query: 201 LPKEIGNLSALSVLDLNSNLFDGIIPYELGDCIS-------LTTLDLGNNNLSGLIPEKI 253
L + +L L L S G IP L + L LDL +N L +
Sbjct: 43 LASALRPQPSLKELCL-SLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVL 101
Query: 254 ADLAQ---LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIP 310
L + LQ L L++N L G + + + P L L NRL G
Sbjct: 102 ESLLRSSSLQELKLNNNGL-GDRGLRLLAKGLKDLPPALE------KLVLGRNRLEGASC 154
Query: 311 EELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGP-IPS---EFGDSIK 366
E L +L +L L+L+ N + I + +
Sbjct: 155 EALA--------------------KALRANRDLKELNLANNGIGDAGIRALAEGLKANCN 194
Query: 367 LQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELD 426
L+ L L NN LT + + L+ + + LK L L+L
Sbjct: 195 LEVLDLNNNGLT----------------DEGASALAETLAS----LKSLEVLNLG----- 229
Query: 427 GQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNN-LFDGG---LPRS 482
N L G + L P L T+++S N + D G L
Sbjct: 230 -------DNNLTDAGAAALASALLSPNISL---------LTLSLSCNDITDDGAKDLAEV 273
Query: 483 LGNLSYLTNLDLHENKFTGEIPPDLGNLM-----QLEYLDVSRN 521
L L LDL NKF E L + +LE L V +
Sbjct: 274 LAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDD 317
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.003
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 686 IIGDGGFGTVYKAAL------PDGKTVAVKKLSQAKTQG-HREFTAEMETLGKV-KHQNL 737
++G G FG V +A+ TVAVK L + T H+ +E++ L + H N+
Sbjct: 14 VLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNV 73
Query: 738 VPLLGYCSFDEEKLLV-YEYMVNGSLDLWLRNR 769
V LLG C+ L+V E+ G+L +LR +
Sbjct: 74 VNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAK 106
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.003
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 686 IIGDGGFGTVYKA-ALPDGK-----TVAVKKL-SQAKTQGHREFTAEMETLGKV-KHQNL 737
+G G FG V +A A GK VAVK L + A T +E++ L + +H+N+
Sbjct: 45 TLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNI 104
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNR 769
V LLG C+ L++ EY G L +LR +
Sbjct: 105 VNLLGACTHGGPVLVITEYCCYGDLLNFLRKK 136
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 36.8 bits (86), Expect = 0.003
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 68 LKSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHI 126
LKS+ LSNN L+ IP +L+ +DL GN LT F +L L + N++
Sbjct: 2 LKSLDLSNNRLT-VIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|185268 PRK15370, PRK15370, E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 0.003
Identities = 65/284 (22%), Positives = 114/284 (40%), Gaps = 70/284 (24%)
Query: 249 IPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGP 308
IP I + Q+ L+L +N L S P + Q N+ L + N+L+
Sbjct: 193 IPACIPE--QITTLILDNNELK----SLPENL--QGNIKTLY---------ANSNQLTS- 234
Query: 309 IPEELGSCVVVVDLLLNNNM-LSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKL 367
IP L + ++L +N L ++P +L +LDL N+++ +P + ++
Sbjct: 235 IPATLPDTIQEMELSINRITELPERLPSALQ------SLDLFHNKISC-LPENLPEELRY 287
Query: 368 QGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDG 427
+Y +N + ++P L S G+ LN+ N L+ T LK L + + L
Sbjct: 288 LSVY--DNSIR-TLPAHLPS--GITHLNVQSNSLTALPETLPPGLKTLEAGENALTSLPA 342
Query: 428 QLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLS 487
LP L L + N+++ LP +L
Sbjct: 343 SLPPELQV------LDVSKNQIT---------------------------VLPETLP--P 367
Query: 488 YLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETM 531
+T LD+ N T +P +L L+ + SRN L ++PE++
Sbjct: 368 TITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESL 407
|
Length = 754 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.003
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 19/179 (10%)
Query: 708 VKKLSQAKTQGHREFTAEMETLGKVKHQNLV--------PLLGYCSFDEEKLLVYEYMVN 759
+ K +A ++ + E+ LG++ H+N++ Y + +Y +M +
Sbjct: 196 IAKRVKAGSRAAIQLENEILALGRLNHENILKIEEILRSEANTYMITQKYDFDLYSFMYD 255
Query: 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF 819
+ D W ++R L R I + ++H +IHRDIK NI LN +
Sbjct: 256 EAFD-W-KDRP-----LLKQTR-AIMKQLLCAVEYIH---DKKLIHRDIKLENIFLNCDG 304
Query: 820 EAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT 878
+ + DFG A GT PE D++S G+ILL++++
Sbjct: 305 KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLS 363
|
Length = 501 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 36.0 bits (84), Expect = 0.004
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270
+L +LDL NN L+ + L L+ L LS NNL+
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLT 37
|
Length = 60 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 959 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.98 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.98 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.98 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.98 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.98 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.98 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.98 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.98 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.98 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.98 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.98 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.97 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.97 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.97 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.97 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.97 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.97 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.97 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.97 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.97 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.97 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.97 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.97 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.96 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.96 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.96 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.96 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.95 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.95 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.95 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.95 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.95 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.94 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.94 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.94 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.93 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.93 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.91 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.91 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.9 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.9 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.9 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.89 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.89 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.89 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.88 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.87 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.87 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.84 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.84 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.83 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.83 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.82 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.82 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.81 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.8 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.8 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.8 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.79 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.79 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.78 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.78 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.76 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.76 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.73 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.73 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.72 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.7 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.69 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.68 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.68 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.67 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.64 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.63 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.56 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.56 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.51 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.47 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.45 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.43 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.42 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.42 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.4 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.39 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.36 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.36 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.34 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.31 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.22 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.21 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.19 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.18 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.17 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.12 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.11 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.1 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.1 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 99.09 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.08 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.06 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 99.04 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.04 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.03 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.02 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.98 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.96 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.95 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.89 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.86 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.83 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.8 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.8 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.75 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.74 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.73 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.65 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.61 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.6 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 98.53 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.52 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.48 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 98.43 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.42 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-103 Score=987.00 Aligned_cols=868 Identities=30% Similarity=0.490 Sum_probs=726.3
Q ss_pred hhcCCcccCCCcccCCCccccEEecCCCcccccCCcCcc-CCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCcccc
Q 002155 25 AEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIG-NCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLT 103 (959)
Q Consensus 25 ~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 103 (959)
...+++.+.+|..|..++.|++|+|++|++.+.+|..+. .+++|++|+|++|++++.+|. +.+++|++|+|++|.++
T Consensus 76 L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~ 153 (968)
T PLN00113 76 LSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLS 153 (968)
T ss_pred ecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCccc
Confidence 345778889999999999999999999999988988765 999999999999999988886 55899999999999999
Q ss_pred ccCCcccccCCCCceeeecccccccccCcccCCC-cccEEeccCCccccccCcccccccceeEEEccccccccccCcccc
Q 002155 104 GTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVG 182 (959)
Q Consensus 104 ~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 182 (959)
+..|..++.+++|++|+|++|.+.+.+|..+..+ +|++|++++|++++.+|..++++++|++|++++|.+.+.+|..|+
T Consensus 154 ~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~ 233 (968)
T PLN00113 154 GEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIG 233 (968)
T ss_pred ccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHh
Confidence 9999999999999999999999999999888777 599999999999999999999999999999999999999999999
Q ss_pred CCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCee
Q 002155 183 NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCL 262 (959)
Q Consensus 183 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 262 (959)
++++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+|..+.++++|++|+|++|.+.+.+|..+..+++|+.|
T Consensus 234 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 313 (968)
T PLN00113 234 GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEIL 313 (968)
T ss_pred cCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEE
Confidence 99999999999999999999999999999999999999998999999999999999999999999999999999999999
Q ss_pred EcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCC
Q 002155 263 VLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTN 342 (959)
Q Consensus 263 ~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~ 342 (959)
++++|.+.+.+|. .+..+++|+.|++++|.+.+.+|..++.+.+|+.|++++|++++..|..+..+++
T Consensus 314 ~l~~n~~~~~~~~------------~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~ 381 (968)
T PLN00113 314 HLFSNNFTGKIPV------------ALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGN 381 (968)
T ss_pred ECCCCccCCcCCh------------hHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCC
Confidence 9999999876653 2445678899999999999999999999999999999999999999999999999
Q ss_pred CCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCC
Q 002155 343 LTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSF 422 (959)
Q Consensus 343 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 422 (959)
|+.|++++|.+.+..|..+..+++|+.|++++|++++..|..+..+++|+.|++++|.+++..+..+..+++|++|++++
T Consensus 382 L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 461 (968)
T PLN00113 382 LFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLAR 461 (968)
T ss_pred CCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeecccccccc
Q 002155 423 NELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGE 502 (959)
Q Consensus 423 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 502 (959)
|++.+.+|..+ ..++|+.|++++|++++..+..|..+. .++.|++++|.+.+.+|..+.++++|++|+|++|.+++.
T Consensus 462 n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 538 (968)
T PLN00113 462 NKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLS--ELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQ 538 (968)
T ss_pred ceeeeecCccc-ccccceEEECcCCccCCccChhhhhhh--ccCEEECcCCcceeeCChHHcCccCCCEEECCCCccccc
Confidence 99998888766 468999999999999998888777665 789999999999999999999999999999999999999
Q ss_pred CCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccCCCccccccCCCCCCCCCCC---CC
Q 002155 503 IPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIG---SN 579 (959)
Q Consensus 503 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~~~~---~~ 579 (959)
+|..+..+++|++|||++|++++.+|..+..+++|+.|++++|++.+.+|..+.+..+...++.||+.+||.... ..
T Consensus 539 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~ 618 (968)
T PLN00113 539 IPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPP 618 (968)
T ss_pred CChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCC
Confidence 999999999999999999999999999999999999999999999999999888888999999999999986542 24
Q ss_pred ccccccCccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhccccCCChhhhhhhccCcccCCccccccCCCCCCcccccc
Q 002155 580 CQVKTFGKLALLHAFGLAGLVVGCVFIVLTTVIALRKQIKRRSRCSDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSINI 659 (959)
Q Consensus 580 c~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (959)
|......... .++++++++++++++++.+++++.+.+++......+. + .. . +..
T Consensus 619 c~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~-~-------------------~~~ 672 (968)
T PLN00113 619 CKRVRKTPSW---WFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVEN-E--DG-T-------------------WEL 672 (968)
T ss_pred Ccccccccee---eeehhHHHHHHHHHHHHHHHHHHHHhhhccccccccc-c--cc-c-------------------ccc
Confidence 5432111111 1112222222222111111112111111110000000 0 00 0 000
Q ss_pred cccc-cCccccCHHHHHHHhcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCce
Q 002155 660 AMFE-QPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNL 737 (959)
Q Consensus 660 ~~~~-~~~~~~~~~~~~~~~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni 737 (959)
..+. .....++..++ ...|...++||+|+||.||+|++ .+++.||||++...... ..+|++.+++++||||
T Consensus 673 ~~~~~~~~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnI 745 (968)
T PLN00113 673 QFFDSKVSKSITINDI---LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNI 745 (968)
T ss_pred cccccccchhhhHHHH---HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCc
Confidence 0000 00112233333 34577788999999999999987 47899999998654322 2346889999999999
Q ss_pred eccccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC
Q 002155 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE 817 (959)
Q Consensus 738 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 817 (959)
|+++++|..++..++||||+++|+|.++++. ++|.++.+++.|+++|++|||+.++++|+|||+||+||+++.
T Consensus 746 v~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~ 818 (968)
T PLN00113 746 VKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN-------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG 818 (968)
T ss_pred ceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc-------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC
Confidence 9999999999999999999999999999953 788999999999999999999766789999999999999999
Q ss_pred CCcEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHH
Q 002155 818 EFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVG 897 (959)
Q Consensus 818 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~ 897 (959)
++.+++. ||.+..... .....+++.|+|||++.+..++.++|||||||++|||+||+.||+.... ....+..
T Consensus 819 ~~~~~~~-~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~--~~~~~~~ 890 (968)
T PLN00113 819 KDEPHLR-LSLPGLLCT-----DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG--VHGSIVE 890 (968)
T ss_pred CCceEEE-ecccccccc-----CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC--CCCcHHH
Confidence 9888775 665543221 1223678999999999999999999999999999999999999865432 2345666
Q ss_pred HHHHHhhcCccccccCccccC--CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 898 WVFQKMKKGQAADVLDPTVLT--ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
|+...........+.++.... ....+...++.+++.+||+.||++||+|+|+++.|+++.
T Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~ 952 (968)
T PLN00113 891 WARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESAS 952 (968)
T ss_pred HHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhh
Confidence 665554444344444544422 234566678899999999999999999999999999874
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-60 Score=596.81 Aligned_cols=516 Identities=38% Similarity=0.547 Sum_probs=484.7
Q ss_pred CccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccC-CCCCCcEEEccCccccccCCcccccCCCCcee
Q 002155 41 WNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELC-TSESLEEIDLDGNLLTGTIEGVFEKCSNLSQL 119 (959)
Q Consensus 41 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 119 (959)
..+++.|+|++|++.+.+|..|..+++|+.|+|++|++++.+|..+. .+++|++|+|++|.+++..|. +.+++|++|
T Consensus 68 ~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L 145 (968)
T PLN00113 68 SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETL 145 (968)
T ss_pred CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEE
Confidence 35799999999999999999999999999999999999988887755 899999999999999987765 468999999
Q ss_pred eecccccccccCcccCCC-cccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCccc
Q 002155 120 VIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLK 198 (959)
Q Consensus 120 ~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 198 (959)
+|++|.+.+.+|..+..+ +|++|++++|.+.+..|..+.++++|++|++++|.+.+.+|..++++++|++|+|++|.++
T Consensus 146 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 225 (968)
T PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225 (968)
T ss_pred ECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccC
Confidence 999999999999888877 5999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCc
Q 002155 199 GHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPS 278 (959)
Q Consensus 199 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 278 (959)
+.+|..|+++++|++|++++|.+.+.+|..++++++|++|+|++|++++..|..+..+++|+.|++++|.+.+.+|..
T Consensus 226 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~-- 303 (968)
T PLN00113 226 GEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPEL-- 303 (968)
T ss_pred CcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChh--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998766642
Q ss_pred chhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCC
Q 002155 279 SYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIP 358 (959)
Q Consensus 279 ~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 358 (959)
+..+.+|+.|++++|.+.+..|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|++.+..|
T Consensus 304 ----------~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p 373 (968)
T PLN00113 304 ----------VIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIP 373 (968)
T ss_pred ----------HcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCC
Confidence 3456788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccc
Q 002155 359 SEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILN 438 (959)
Q Consensus 359 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 438 (959)
..+..+.+|+.|++++|.+.+..|..+..+++|+.|++++|++++..|..|.++++|+.|++++|.+++.+|..+..+++
T Consensus 374 ~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 453 (968)
T PLN00113 374 EGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPS 453 (968)
T ss_pred hhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeC
Q 002155 439 LVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDV 518 (959)
Q Consensus 439 L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 518 (959)
|+.|++++|++.+..+..+.. ..++.|++++|++.+..|..|.++++|+.|+|++|++++.+|..+..+++|++|+|
T Consensus 454 L~~L~L~~n~~~~~~p~~~~~---~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 530 (968)
T PLN00113 454 LQMLSLARNKFFGGLPDSFGS---KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDL 530 (968)
T ss_pred CcEEECcCceeeeecCccccc---ccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEEC
Confidence 999999999999877766543 37999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCCCccccCCCCccEEecccCcCcccCCCC-cccCCCccccccCCCCCCC
Q 002155 519 SRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS-GICQNLSKISLTGNKDLCG 573 (959)
Q Consensus 519 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~ 573 (959)
++|++++.+|..+..+++|+.|+|++|++.+.+|.. ..+..|+.+++++|+..+.
T Consensus 531 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~ 586 (968)
T PLN00113 531 SHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGS 586 (968)
T ss_pred CCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceee
Confidence 999999999999999999999999999999877754 5578899999999997763
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-48 Score=424.35 Aligned_cols=289 Identities=48% Similarity=0.816 Sum_probs=251.2
Q ss_pred CccccCHHHHHHHhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccce
Q 002155 665 PLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744 (959)
Q Consensus 665 ~~~~~~~~~~~~~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 744 (959)
+...+++.++..||++|...++||+|+||.||+|...+|+.||||++.........+|..|+.++++++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45679999999999999999999999999999999999999999988754433145599999999999999999999999
Q ss_pred ecCC-ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEE
Q 002155 745 SFDE-EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 745 ~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 823 (959)
.+.+ +.++|||||++|+|.++++..... +++|.+|++||.++|+||+|||+.+.+.||||||||+|||+|+++++||
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl 218 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL 218 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence 9988 599999999999999999886543 7899999999999999999999877778999999999999999999999
Q ss_pred cccccccccccccccccccc-cccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 824 ADFGLARLISACETHVSTDI-AGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
+|||+|+......... ... .||.+|+|||+...+..+.|+|||||||++.|++||+.|.+... ......+..|+...
T Consensus 219 sDFGLa~~~~~~~~~~-~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~-~~~~~~l~~w~~~~ 296 (361)
T KOG1187|consen 219 SDFGLAKLGPEGDTSV-STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSR-PRGELSLVEWAKPL 296 (361)
T ss_pred cCccCcccCCccccce-eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCC-CcccccHHHHHHHH
Confidence 9999996543211111 112 79999999999999999999999999999999999998876543 22334589999999
Q ss_pred hhcCccccccCcccc-CCCCH-HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 903 MKKGQAADVLDPTVL-TADSK-PMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 903 ~~~~~~~~~~~~~~~-~~~~~-~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
+..+...+.+||.+. ..... ....++..++..|++.+|.+||+|.||++.|+.+.
T Consensus 297 ~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 297 LEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 999999999999976 44443 68888999999999999999999999999997664
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=383.22 Aligned_cols=252 Identities=29% Similarity=0.438 Sum_probs=209.6
Q ss_pred CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCC-ceEEEEEec
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE-EKLLVYEYM 757 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~ 757 (959)
.+..++||+|..|+||+++++ +++.+|+|++... +....+++.+|++++++.+||+||.+||.|..+. +..++||||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM 160 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM 160 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence 445778999999999999876 6889999999543 4556778999999999999999999999999888 599999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++|+|++++...+ .+++....+|+.+|++||.|||+ +++||||||||+|||++..|+|||||||.++.....
T Consensus 161 DgGSLd~~~k~~g----~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-- 232 (364)
T KOG0581|consen 161 DGGSLDDILKRVG----RIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-- 232 (364)
T ss_pred CCCCHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--
Confidence 9999999998753 58999999999999999999995 489999999999999999999999999999887543
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
....++||..|||||.+.+..|+.++||||||++++|+.+|+.||.+..++ ...+.+.+..... +. |+..
T Consensus 233 -~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~--~~~~~~Ll~~Iv~-~p------pP~l 302 (364)
T KOG0581|consen 233 -IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP--YLDIFELLCAIVD-EP------PPRL 302 (364)
T ss_pred -hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC--CCCHHHHHHHHhc-CC------CCCC
Confidence 556789999999999999999999999999999999999999999765111 1122222222111 11 1111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+.. .+..++..++..|+++||.+||++.|++++
T Consensus 303 P~~--~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 303 PEG--EFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred Ccc--cCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 111 366678889999999999999999999875
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-46 Score=362.00 Aligned_cols=258 Identities=25% Similarity=0.400 Sum_probs=211.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccc--cchhhHHHHHHHHHHHhcCCCCceecccc-ceecCCc-eEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQ--AKTQGHREFTAEMETLGKVKHQNLVPLLG-YCSFDEE-KLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~-~~~~~~~-~~lv 753 (959)
.+|.+.++||+|+||+||++.. .+|..+|.|.+.- .+.....+..+|+.++++++|||||++++ -+.++.+ .++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 3466788999999999999974 5899999998863 24555677889999999999999999998 4555555 7999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC-eEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH-IIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||++|+|..+++......+.+++.++|+++.|+++||.++|....+| |+||||||.||+++++|.|||+|||+++.+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 9999999999999988777788999999999999999999999533232 889999999999999999999999999988
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
... .......+|||.||+||.+.+.+|+++|||||+||++|||+.-++||.+. ++ ....+.+..+.....
T Consensus 179 ~s~-~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-------n~-~~L~~KI~qgd~~~~- 248 (375)
T KOG0591|consen 179 SSK-TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-------NL-LSLCKKIEQGDYPPL- 248 (375)
T ss_pred cch-hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-------cH-HHHHHHHHcCCCCCC-
Confidence 753 33445689999999999999999999999999999999999999999753 22 223444544422111
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 953 (959)
...-....+..+|..|+.+||+.||+.-.++..+
T Consensus 249 -------p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 249 -------PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred -------cHHHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 1244666788899999999999999855444443
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-44 Score=390.05 Aligned_cols=253 Identities=34% Similarity=0.555 Sum_probs=206.6
Q ss_pred CCCeeccCCCeEEEEEEcCCCCEEEEEEccccchh--hHHHHHHHHHHHhcCCCCceeccccceecCC-ceEEEEEeccC
Q 002155 683 KTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQ--GHREFTAEMETLGKVKHQNLVPLLGYCSFDE-EKLLVYEYMVN 759 (959)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~ 759 (959)
..+.||+|+||+||+|.+.....||||++...... ..++|.+|+.+|++++|||||+++|+|.... ..++||||+++
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~ 124 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG 124 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence 35569999999999999965445999999754322 2568999999999999999999999998877 79999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC-eEeCCCCCCCEEECCCC-cEEEcccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH-IIHRDIKASNILLNEEF-EAKVADFGLARLISACET 837 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~~~~~~ 837 (959)
|+|.++++.. ....+++..+..||.|||+|+.||| +.+ |||||+||+|||++.++ ++||+|||+++......
T Consensus 125 GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~- 198 (362)
T KOG0192|consen 125 GSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK- 198 (362)
T ss_pred CcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc-
Confidence 9999999874 2246999999999999999999999 778 99999999999999997 99999999998754321
Q ss_pred cccccccccccccCCCcCC--CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 838 HVSTDIAGTFGYIPPEYGQ--SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||..... ......+ ...+ .+|.
T Consensus 199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~----~~~~~~v---~~~~-----~Rp~ 266 (362)
T KOG0192|consen 199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP----VQVASAV---VVGG-----LRPP 266 (362)
T ss_pred ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH----HHHHHHH---HhcC-----CCCC
Confidence 3334468999999999999 66899999999999999999999999865322 1111111 1111 1122
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
+ +..+...+..++.+||+.||++||++.+++..|+.+.
T Consensus 267 ~----p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~ 304 (362)
T KOG0192|consen 267 I----PKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIM 304 (362)
T ss_pred C----CccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHH
Confidence 1 1225557888899999999999999999999999774
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-44 Score=386.97 Aligned_cols=248 Identities=28% Similarity=0.445 Sum_probs=212.8
Q ss_pred cCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.+|+.+++||+|||+.||.+++ .+|+.||+|++.+. +....+...+|+++.+.++|||||+++++|.+.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5799999999999999999998 68999999999763 3445677889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
|+|+.++|..+++.+. ++++.+++.+..||+.|+.||| +.+|+|||+|-.|++++++.+|||+|||+|+.+..
T Consensus 98 ELC~~~sL~el~Krrk----~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRK----PLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EecCCccHHHHHHhcC----CCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecC
Confidence 9999999999998554 7899999999999999999999 89999999999999999999999999999998865
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. .+.....+|||.|.|||++.....+..+||||+||++|-|++|++||.... .......++ ..+...|
T Consensus 171 ~-~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~--------vkety~~Ik---~~~Y~~P 238 (592)
T KOG0575|consen 171 D-GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT--------VKETYNKIK---LNEYSMP 238 (592)
T ss_pred c-ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch--------HHHHHHHHH---hcCcccc
Confidence 3 344566899999999999999999999999999999999999999996531 112233333 2333333
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. .......+||.+++++||.+|||+++|+.+
T Consensus 239 ~-------~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 239 S-------HLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred c-------ccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 3 233355678889999999999999999864
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-44 Score=368.67 Aligned_cols=200 Identities=33% Similarity=0.500 Sum_probs=181.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
..+|...+.||+|+||+||+|+++ ++..||||.+.+. .....+-+..|+.+++.++|||||++++++..++..|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 467888899999999999999875 6899999999776 4556677889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC------CcEEEccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE------FEAKVADFGL 828 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~------~~~kl~Dfg~ 828 (959)
|||.||||.+|++.++ .+++.++..++.|+|.|+++|| +++||||||||.|||++.. ..+||+|||+
T Consensus 89 EyC~gGDLs~yi~~~~----~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG----RLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EeCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 9999999999999875 5899999999999999999999 8999999999999999765 5689999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 886 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~ 886 (959)
|+.+.. .......+|++-|||||++....|+.|+|+||+|+++|+|++|++||+..
T Consensus 162 AR~L~~--~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 162 ARFLQP--GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred hhhCCc--hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 998863 34445679999999999999999999999999999999999999999753
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-45 Score=387.72 Aligned_cols=251 Identities=31% Similarity=0.496 Sum_probs=211.1
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCHH
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLD 763 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~ 763 (959)
.+.||+|.||+||.|++.....||+|.++.. .-..++|.+|+++|++++|++||+++|+|..++..+||||||+.|+|.
T Consensus 211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl 289 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLL 289 (468)
T ss_pred HHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHH
Confidence 5679999999999999987779999998754 233467889999999999999999999999988999999999999999
Q ss_pred HHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccccccc
Q 002155 764 LWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDI 843 (959)
Q Consensus 764 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 843 (959)
+|++... ...+...+.+.++.|||+|++||+ ++++||||+.++||||+++..|||+|||+|+.............
T Consensus 290 ~yLr~~~--~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~ 364 (468)
T KOG0197|consen 290 DYLRTRE--GGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGG 364 (468)
T ss_pred HHhhhcC--CCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCC
Confidence 9999833 346788899999999999999999 89999999999999999999999999999996544333333334
Q ss_pred cccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCH
Q 002155 844 AGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSK 922 (959)
Q Consensus 844 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (959)
.-+..|+|||.+..+.|+.|||||||||++||++| |+.||..... ..+.+.+.++.... .+.
T Consensus 365 kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn--------~ev~~~le~GyRlp---------~P~ 427 (468)
T KOG0197|consen 365 KFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN--------EEVLELLERGYRLP---------RPE 427 (468)
T ss_pred CCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH--------HHHHHHHhccCcCC---------CCC
Confidence 44669999999999999999999999999999999 7888654321 22455555554322 223
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 923 PMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 923 ~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.++..+.++|..||+.+|++|||++.+...++++.
T Consensus 428 ~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~ 462 (468)
T KOG0197|consen 428 GCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF 462 (468)
T ss_pred CCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence 35567889999999999999999999999999875
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-44 Score=367.87 Aligned_cols=253 Identities=28% Similarity=0.408 Sum_probs=210.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccch-------hhHHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKT-------QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
.+.|.+.+.+|+|+||.|-+|.. ++|+.||||.+.+... .......+|+++|++++||+||+++++|...+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 45677889999999999999975 4799999999864321 112335689999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC---CcEEEccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE---FEAKVADF 826 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Df 826 (959)
.|+||||++||+|.+++-... .+.+..-..+++|++.|+.||| +.||+||||||+|||+..+ -.+||+||
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk----~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANK----YLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred eEEEEEEecCccHHHHHHhcc----ccccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEeccc
Confidence 999999999999999997765 4667777899999999999999 8999999999999999766 67999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCCCC---CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHh
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSGRS---TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKM 903 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (959)
|+|+..+ ....+..++||+.|.|||++.++.+ ..++|+||+||++|-+++|.+||.....+.. ..+++
T Consensus 324 GlAK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s-------l~eQI 394 (475)
T KOG0615|consen 324 GLAKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS-------LKEQI 394 (475)
T ss_pred chhhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc-------HHHHH
Confidence 9999876 4455677899999999999887754 4578999999999999999999976544421 34455
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..+.... .+..+.....+..++|.+|+..||++|||+.|++++
T Consensus 395 ~~G~y~f------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 395 LKGRYAF------GPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred hcCcccc------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 5543322 233456677788999999999999999999999875
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=361.72 Aligned_cols=249 Identities=29% Similarity=0.395 Sum_probs=204.4
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
..++|++.++||+|+||+||.++.+ +++.||+|++++.. ..+.+...+|..++.+++||.||+++..|++.+..|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 3468999999999999999999865 58899999998654 3345667889999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
|+||+.||.|..++++.. .+++..+..++.+|+.||.||| +.||||||+||+|||+|.+|+++|+|||+|+..
T Consensus 103 Vld~~~GGeLf~hL~~eg----~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREG----RFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred EEeccCCccHHHHHHhcC----CcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 999999999999998755 5889999999999999999999 999999999999999999999999999999865
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
-.. ......++||+.|||||++.+.+|+.++|+||+|+++|||++|.+||...... .+.+.+..+.. ..
T Consensus 176 ~~~-~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~--------~~~~~I~~~k~--~~ 244 (357)
T KOG0598|consen 176 LKD-GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK--------KMYDKILKGKL--PL 244 (357)
T ss_pred ccC-CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH--------HHHHHHhcCcC--CC
Confidence 432 23345589999999999999999999999999999999999999999654221 12233333221 00
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCC----CHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP----TMLHVL 950 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp----s~~ell 950 (959)
.|. -......+++.+.+..||++|. ++.+|.
T Consensus 245 ~p~-------~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik 279 (357)
T KOG0598|consen 245 PPG-------YLSEEARDLLKKLLKRDPRQRLGGPGDAEEIK 279 (357)
T ss_pred CCc-------cCCHHHHHHHHHHhccCHHHhcCCCCChHHhh
Confidence 111 1223456778888999999995 455543
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=395.92 Aligned_cols=258 Identities=30% Similarity=0.494 Sum_probs=218.5
Q ss_pred CCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccchh-hHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAKTQ-GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
+....+.||+|+||+||+|+.. +...||||.++..... ...+|++|+++++.++|||||+++|+|.+++..++
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M 566 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM 566 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE
Confidence 3445778999999999999853 3567999999876655 78899999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCC------c----cccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEE
Q 002155 753 VYEYMVNGSLDLWLRNRTGS------L----EVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAK 822 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~------~----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 822 (959)
|+|||..|||.+|++.+... . .+++..+.+.||.|||.|++||- ++.+||||+.++|+||+++..||
T Consensus 567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~VK 643 (774)
T KOG1026|consen 567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLVVK 643 (774)
T ss_pred EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceEEE
Confidence 99999999999999875532 1 23788999999999999999999 88999999999999999999999
Q ss_pred Ecccccccccccccccccc-cccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHH
Q 002155 823 VADFGLARLISACETHVST-DIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 823 l~Dfg~~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 900 (959)
|+|||+++.....+.+... ...-..+|||||.+..++|+++||||||||++||+++ |+.||..-..+ .|.
T Consensus 644 IsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~--------EVI 715 (774)
T KOG1026|consen 644 ISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ--------EVI 715 (774)
T ss_pred ecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH--------HHH
Confidence 9999999877655444433 2234569999999999999999999999999999999 99998653222 355
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
+.++.+.. -+++.+++.++++||..||+.+|.+||+++||-..|++.-
T Consensus 716 e~i~~g~l---------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~ 763 (774)
T KOG1026|consen 716 ECIRAGQL---------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWA 763 (774)
T ss_pred HHHHcCCc---------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHH
Confidence 55665543 2345667789999999999999999999999999998753
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-47 Score=384.50 Aligned_cols=494 Identities=29% Similarity=0.345 Sum_probs=353.9
Q ss_pred CccchhhhhhcCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEE
Q 002155 17 DLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEID 96 (959)
Q Consensus 17 ~~~~~~~~~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 96 (959)
..+..+++.++|.+. .+-+.+.++..+.+|++++|++. ++|++++.+..++.|++|+|+++ .+|+.+..+.+|+.|+
T Consensus 44 qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~ 120 (565)
T KOG0472|consen 44 QVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLD 120 (565)
T ss_pred hcchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhh
Confidence 334445566655554 67777888888999999999887 88888999999999999999988 7888888888999999
Q ss_pred ccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccc
Q 002155 97 LDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGS 176 (959)
Q Consensus 97 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~ 176 (959)
.++|.++ ..+..++.+..|..++..+|++...+++.++..++..|++.+|+++...|..+. ++.|++|+..+|.++ .
T Consensus 121 ~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-t 197 (565)
T KOG0472|consen 121 CSSNELK-ELPDSIGRLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-T 197 (565)
T ss_pred cccccee-ecCchHHHHhhhhhhhccccccccCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-c
Confidence 9999888 566777888888899988998887777777777888899999998866555555 888999999999888 8
Q ss_pred cCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCcc-ccCCCCCCEEEcccccCCCCCchhhhc
Q 002155 177 LPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYE-LGDCISLTTLDLGNNNLSGLIPEKIAD 255 (959)
Q Consensus 177 ~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~ 255 (959)
+|..++.+.+|+.|+|.+|+|. .+| +|.+++.|++|+++.|+|+ .+|.+ ..+++++.+|||.+|+++ ..|+.++-
T Consensus 198 lP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~cl 273 (565)
T KOG0472|consen 198 LPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICL 273 (565)
T ss_pred CChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHH
Confidence 8888999999999999999998 566 8889999999999999998 44544 458889999999999998 45888888
Q ss_pred ccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcc--cccEEE--ccCCcCcc
Q 002155 256 LAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCV--VVVDLL--LNNNMLSG 331 (959)
Q Consensus 256 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~--~L~~L~--L~~n~i~~ 331 (959)
+.+|.+||+|+|.|++-.+ .+..+ +|+.|.+.+|.+.+.-.+.+..-+ -|++|. +..-.++.
T Consensus 274 LrsL~rLDlSNN~is~Lp~-------------sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~ 339 (565)
T KOG0472|consen 274 LRSLERLDLSNNDISSLPY-------------SLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQ 339 (565)
T ss_pred hhhhhhhcccCCccccCCc-------------ccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCC
Confidence 9999999999888873222 12333 444455555544322111111110 011110 00000000
Q ss_pred cCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCC---CcEEEccCCcCCCCCCCc
Q 002155 332 KIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGG---LVKLNLTGNKLSGKVPTS 408 (959)
Q Consensus 332 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~---L~~L~L~~N~i~~~~~~~ 408 (959)
. +.=.-+.-............+.+.+.|++++-+++ .+|+....... +..++++.|++. ..|..
T Consensus 340 s-----------e~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~ 406 (565)
T KOG0472|consen 340 S-----------EGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKR 406 (565)
T ss_pred C-----------cccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhh
Confidence 0 00000000000011112234557888888888888 44544332223 778889999988 67887
Q ss_pred cCCcccc-cccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCcc
Q 002155 409 FGNLKEL-THLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLS 487 (959)
Q Consensus 409 ~~~l~~L-~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~ 487 (959)
+..++.+ +.+++++|.+. .+|..++.+++|..|+|++|.+..+|.+.++-. .++.||+|+|+|. .+|+.+..+.
T Consensus 407 L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln~LP~e~~~lv---~Lq~LnlS~NrFr-~lP~~~y~lq 481 (565)
T KOG0472|consen 407 LVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLNDLPEEMGSLV---RLQTLNLSFNRFR-MLPECLYELQ 481 (565)
T ss_pred hHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhhhcchhhhhhh---hhheecccccccc-cchHHHhhHH
Confidence 7777764 45666666665 888889999999999999999888887766543 3777888888777 6777777777
Q ss_pred ccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCC
Q 002155 488 YLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS 554 (959)
Q Consensus 488 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 554 (959)
.|+.+-.++|++....|..+.+|.+|..|||.+|.|. .+|+.++++.+|++|++.||+|. .|+..
T Consensus 482 ~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr-~Pr~~ 546 (565)
T KOG0472|consen 482 TLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR-QPRHQ 546 (565)
T ss_pred HHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC-CCHHH
Confidence 7777777778887544555888888888888888887 67778888888888888888887 44443
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=341.32 Aligned_cols=266 Identities=26% Similarity=0.327 Sum_probs=202.8
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
+.|+...++|+|+||+||+++.+ +|+.||||++..... ...+-..+|++++++++|||+|.++.+|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 46778889999999999999987 599999999865433 223446789999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
||+..-|.+ +.... .-.+.+.+.+++.|++.|+.|+| +.+++||||||+|||++.+|.+||||||+|+....
T Consensus 82 ~~dhTvL~e-Le~~p---~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~- 153 (396)
T KOG0593|consen 82 YCDHTVLHE-LERYP---NGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA- 153 (396)
T ss_pred ecchHHHHH-HHhcc---CCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcC-
Confidence 998855544 44333 23677889999999999999999 89999999999999999999999999999998874
Q ss_pred cccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCcccc-------CCchHHHHHHHhhcCc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIE-------GGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~-------~~~~~~~~~~~~~~~~ 907 (959)
.....+.++.|.+|+|||.+.+ .+|+..+||||+||++.||++|.+-|.+..+-+. -+++...-........
T Consensus 154 pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~ 233 (396)
T KOG0593|consen 154 PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNP 233 (396)
T ss_pred CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCC
Confidence 2334466789999999998776 7899999999999999999999988755322110 0111111111111111
Q ss_pred c-ccccCcc-----ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 A-ADVLDPT-----VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~-~~~~~~~-----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ....-|. ...........-+++++..|++.||++|++-+|++.+
T Consensus 234 ~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 234 FFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred ceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 1 1111111 1111223344567899999999999999999998753
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-47 Score=384.30 Aligned_cols=495 Identities=28% Similarity=0.384 Sum_probs=394.7
Q ss_pred CccccCCCCCcCccccCccchhhhhhcCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCC
Q 002155 1 MLSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSG 80 (959)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 80 (959)
.||+|.++ ++-++++++.-++.+..+++...++|++++.+..++.|+.++|++. ++|++++.+.+|+.|+.+.|.+.
T Consensus 51 ils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~- 127 (565)
T KOG0472|consen 51 ILSHNDLE-VLREDLKNLACLTVLNVHDNKLSQLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK- 127 (565)
T ss_pred hhccCchh-hccHhhhcccceeEEEeccchhhhCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-
Confidence 37899999 9999999999998888888888899999999999999999999998 99999999999999999999999
Q ss_pred CCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCcccccc
Q 002155 81 SIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNS 160 (959)
Q Consensus 81 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~ 160 (959)
.+|++++.+-+|+.|+..+|+++ ..|+++..+.+|..|++.+|+++..+|+.+....|++||..+|-+. .+|..++.+
T Consensus 128 el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l 205 (565)
T KOG0472|consen 128 ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPPELGGL 205 (565)
T ss_pred ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCChhhcch
Confidence 78889999999999999999999 5778889999999999999999999999999667999999999988 678889999
Q ss_pred cceeEEEccccccccccCccccCCcCCceEeccCCcccccCCcccc-CCCCCCEEEccCCcCCccCCccccCCCCCCEEE
Q 002155 161 ETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIG-NLSALSVLDLNSNLFDGIIPYELGDCISLTTLD 239 (959)
Q Consensus 161 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 239 (959)
.+|.-|++++|+|. .+| +|.++..|++|+++.|+|+ .+|++.+ ++.+|.+|||+.|+++ ..|+.++-+++|++||
T Consensus 206 ~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLD 281 (565)
T KOG0472|consen 206 ESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLD 281 (565)
T ss_pred hhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhc
Confidence 99999999999999 778 8999999999999999999 6777665 9999999999999999 7899999999999999
Q ss_pred cccccCCCCCchhhhcccCCCeeEcccccCCCC---CCCCCcchhhccCCCCccccccccce--ecCCCc----CCC---
Q 002155 240 LGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGP---IPSKPSSYFRQANMPDLSFIQHHGVF--DLSYNR----LSG--- 307 (959)
Q Consensus 240 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~~~~~~~~~~l~~l~~L~~l--~L~~n~----l~~--- 307 (959)
+|+|.|++. |..++++ .|+.|-+.+|.+... +-..+.. .-+.++.. ..- -++..+ -..
T Consensus 282 lSNN~is~L-p~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~-------~vLKyLrs-~~~~dglS~se~~~e~~~t~~ 351 (565)
T KOG0472|consen 282 LSNNDISSL-PYSLGNL-HLKFLALEGNPLRTIRREIISKGTQ-------EVLKYLRS-KIKDDGLSQSEGGTETAMTLP 351 (565)
T ss_pred ccCCccccC-Ccccccc-eeeehhhcCCchHHHHHHHHcccHH-------HHHHHHHH-hhccCCCCCCcccccccCCCC
Confidence 999999965 7789999 999999999987621 1000000 00001100 000 000000 000
Q ss_pred -CCCcccCCcccccEEEccCCcCcccCCccccCC--CCCCEEEccCCCCCCCCCCCcCCCCcceE-EEeeCcccCCcccc
Q 002155 308 -PIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRL--TNLTTLDLSRNQLTGPIPSEFGDSIKLQG-LYLGNNQLTGSIPW 383 (959)
Q Consensus 308 -~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~-L~L~~n~l~~~~~~ 383 (959)
........+.+.+.|.+++-+++..+...|..- .-.+..+++.|++. ..|..+..+..+.+ +.+++|.+. .+|.
T Consensus 352 ~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~ 429 (565)
T KOG0472|consen 352 SESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPL 429 (565)
T ss_pred CCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchH
Confidence 011112234566777777777775444444332 23778899999998 56766666665444 555666555 8888
Q ss_pred ccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhh
Q 002155 384 SLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAW 463 (959)
Q Consensus 384 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~ 463 (959)
.+..+++|..|+|++|-+. .+|..++.+..|+.|+++.|++. ..|..+..+..++.+-.++|++..+++
T Consensus 430 ~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~--------- 498 (565)
T KOG0472|consen 430 ELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDP--------- 498 (565)
T ss_pred HHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccCh---------
Confidence 8999999999999999998 68889999999999999999998 888888887777777777788875543
Q ss_pred hhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecc
Q 002155 464 KIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLA 543 (959)
Q Consensus 464 ~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 543 (959)
..+.++.+|..|||.+|.+. .+|+.++++++|++|++++|.+. .++..+-.......|..-
T Consensus 499 -----------------~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr-~Pr~~iLmkgT~aiL~yl 559 (565)
T KOG0472|consen 499 -----------------SGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR-QPRHQILMKGTAAILSYL 559 (565)
T ss_pred -----------------HHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC-CCHHHHhccChHHHHHHh
Confidence 33567788888999999888 88889999999999999999987 454444433444444433
Q ss_pred cCc
Q 002155 544 ENR 546 (959)
Q Consensus 544 ~N~ 546 (959)
.++
T Consensus 560 rdr 562 (565)
T KOG0472|consen 560 RDR 562 (565)
T ss_pred ccc
Confidence 333
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=363.18 Aligned_cols=250 Identities=26% Similarity=0.389 Sum_probs=210.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
..|...++||+|+.|.||.|+.. +++.||||++........+-+.+|+.+|+..+|+|||++++.|..+++.|+||||+
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 45666788999999999999754 68899999998776666677889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
+||+|.|.+.... +++.++..|+.+++.||+||| ..||+|||||.+|||++.+|.+||+|||+|..+.....
T Consensus 353 ~ggsLTDvVt~~~-----~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~ 424 (550)
T KOG0578|consen 353 EGGSLTDVVTKTR-----MTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS 424 (550)
T ss_pred CCCchhhhhhccc-----ccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence 9999999998754 889999999999999999999 99999999999999999999999999999988865443
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
.....+|||+|||||++....|++++||||||++++||+-|.+||-.+.+- -+ ++ .+...-. |.
T Consensus 425 -KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl------rA-ly-LIa~ng~-----P~-- 488 (550)
T KOG0578|consen 425 -KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL------RA-LY-LIATNGT-----PK-- 488 (550)
T ss_pred -ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH------HH-HH-HHhhcCC-----CC--
Confidence 445678999999999999999999999999999999999999998642211 00 11 1111111 11
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
-.........+.+++.+|++.||++|++|.|+|++
T Consensus 489 lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 489 LKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred cCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 11233455578889999999999999999999975
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=367.63 Aligned_cols=376 Identities=26% Similarity=0.265 Sum_probs=316.1
Q ss_pred CCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcc
Q 002155 186 ALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLS 265 (959)
Q Consensus 186 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 265 (959)
.-+.|++++|+++...+..|.++++|+++++.+|.++ .+|.......+|+.|+|.+|.|+.+-.+.++.++.|+.||||
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 3456777777777777777778888888888888777 566555555568888888888877777778888888888888
Q ss_pred cccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCE
Q 002155 266 HNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTT 345 (959)
Q Consensus 266 ~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 345 (959)
.|.|+.. ..+.+..-.+++.|+|+.|+|+......|.++.+|..|-|++|+|+..++.+|.++++|+.
T Consensus 158 rN~is~i------------~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~ 225 (873)
T KOG4194|consen 158 RNLISEI------------PKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLES 225 (873)
T ss_pred hchhhcc------------cCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhh
Confidence 8877621 1122223345677888888888888888888899999999999999888899999999999
Q ss_pred EEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccc
Q 002155 346 LDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNEL 425 (959)
Q Consensus 346 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 425 (959)
|+|..|+|.-+.--.|.++++|+.|.|..|.|...-...|..+.++++|+|+.|+++.....++.+|++|+.|+||+|.|
T Consensus 226 LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI 305 (873)
T KOG4194|consen 226 LDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAI 305 (873)
T ss_pred hhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhh
Confidence 99999999865567899999999999999999988888899999999999999999988888999999999999999999
Q ss_pred cCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCC-
Q 002155 426 DGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIP- 504 (959)
Q Consensus 426 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p- 504 (959)
....+++.+-+++|++|+|+.|+|+.++++.|..+. .|+.|+|++|.+...-..+|..+++|++|||++|.++..+.
T Consensus 306 ~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~--~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IED 383 (873)
T KOG4194|consen 306 QRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLS--QLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIED 383 (873)
T ss_pred heeecchhhhcccceeEeccccccccCChhHHHHHH--HhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEec
Confidence 988889999999999999999999999999888777 78899999999998888899999999999999999987665
Q ss_pred --cCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccCCCccccccCCCCCCCCCC
Q 002155 505 --PDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKII 576 (959)
Q Consensus 505 --~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~~~ 576 (959)
..|.+|++|+.|+|.+|+|..+.-.+|..+++|++|||.+|.|.++-|....-..|+.|.+..-..+|||.+
T Consensus 384 aa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDCql 457 (873)
T KOG4194|consen 384 AAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCDCQL 457 (873)
T ss_pred chhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEEeccH
Confidence 447789999999999999997777899999999999999999999988876656899999998889997643
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-43 Score=369.12 Aligned_cols=403 Identities=22% Similarity=0.215 Sum_probs=306.8
Q ss_pred CcEEEcCCCcCCCCCCcccCC--CCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEecc
Q 002155 68 LKSISLSNNFLSGSIPRELCT--SESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLD 145 (959)
Q Consensus 68 L~~L~Ls~n~l~~~~p~~~~~--l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls 145 (959)
-+.||.+++.+...--..+.+ ...-++||+++|++..+.+..|.++++|+.++|.+|.++
T Consensus 54 ~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt------------------ 115 (873)
T KOG4194|consen 54 TRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT------------------ 115 (873)
T ss_pred ceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh------------------
Confidence 356777777776321111111 123456888888888777777788888887777777665
Q ss_pred CCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccC
Q 002155 146 SNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGII 225 (959)
Q Consensus 146 ~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 225 (959)
.+|........|++|+|.+|.|..+-.+++..++.|+.||||.|.|+.+.-.+|..-.++++|+|++|+|+.+.
T Consensus 116 ------~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~ 189 (873)
T KOG4194|consen 116 ------RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLE 189 (873)
T ss_pred ------hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccc
Confidence 34444444555666666666666666677888888888888988888666667888788999999999998888
Q ss_pred CccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcC
Q 002155 226 PYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRL 305 (959)
Q Consensus 226 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l 305 (959)
.+.|.++.+|.+|.|++|+|+.+.+..|.++++|+.|+|..|+|.-
T Consensus 190 ~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~iri---------------------------------- 235 (873)
T KOG4194|consen 190 TGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRI---------------------------------- 235 (873)
T ss_pred cccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceee----------------------------------
Confidence 8889999999999999999998888889999999999998888751
Q ss_pred CCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCcccccc
Q 002155 306 SGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSL 385 (959)
Q Consensus 306 ~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 385 (959)
.---.|..+.+|+.|.|..|.|.....++|..+.++++|+|+.|+++.+..+++.++.+|+.|+||+|.|..+.++.+
T Consensus 236 --ve~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~W 313 (873)
T KOG4194|consen 236 --VEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSW 313 (873)
T ss_pred --ehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchh
Confidence 011234556666777777777777777788888888888888888887777777888888888888888887777777
Q ss_pred ccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhh
Q 002155 386 GSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKI 465 (959)
Q Consensus 386 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l 465 (959)
...++|++|+|++|+|+...+.+|..|..|++|.|++|+|+......|..+.+|+.|+|++|.|+....+
T Consensus 314 sftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IED---------- 383 (873)
T KOG4194|consen 314 SFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIED---------- 383 (873)
T ss_pred hhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEec----------
Confidence 7778888888888888877777787787888888888888766667777778888888888877755443
Q ss_pred ceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccC
Q 002155 466 ATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAEN 545 (959)
Q Consensus 466 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 545 (959)
-...|.+|++|+.|+|.+|++..+.-.+|.+++.|++|||.+|.|.++.|++|..+ .|+.|.+..-
T Consensus 384 -------------aa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSs 449 (873)
T KOG4194|consen 384 -------------AAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSS 449 (873)
T ss_pred -------------chhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhccc
Confidence 12457778999999999999986656789999999999999999999999999998 8998888777
Q ss_pred cCcccCCCC
Q 002155 546 RLEGMVPRS 554 (959)
Q Consensus 546 ~l~~~~~~~ 554 (959)
.+-+...-.
T Consensus 450 sflCDCql~ 458 (873)
T KOG4194|consen 450 SFLCDCQLK 458 (873)
T ss_pred ceEEeccHH
Confidence 666554433
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=346.30 Aligned_cols=262 Identities=24% Similarity=0.359 Sum_probs=209.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccch-hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|+..++||.|..++||+|+. +.+..||||++.-+.. .+.+.+.+|++.|+.++||||++++..|..+...|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 46789999999999999999985 4689999999976543 335789999999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
||.+|++.+.++.... .-+++..+..|.+++++||.||| ..|.||||||+.|||++.+|.|||+|||.+..+...
T Consensus 105 fMa~GS~ldIik~~~~--~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYP--DGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred hhcCCcHHHHHHHHcc--ccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 9999999999988653 34889999999999999999999 899999999999999999999999999998765433
Q ss_pred ccccc---ccccccccccCCCcCCC--CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 836 ETHVS---TDIAGTFGYIPPEYGQS--GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 836 ~~~~~---~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
..... ..++||++|||||++.. ..|+.|+||||||++..|+.+|..||....+- ......+... ...
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm-------kvLl~tLqn~-pp~ 251 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM-------KVLLLTLQND-PPT 251 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH-------HHHHHHhcCC-CCC
Confidence 32111 45689999999998433 36999999999999999999999999653221 1111222111 110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.............+...+.+++..|+++||.+||||++++++
T Consensus 252 ~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 252 LLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred cccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 000011112233455578899999999999999999999864
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=357.80 Aligned_cols=253 Identities=26% Similarity=0.363 Sum_probs=207.4
Q ss_pred HHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcC-CCCceeccccceecCCc
Q 002155 675 LEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 675 ~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 749 (959)
....++|.+++.||+|+|++||+|+.+ +++.||||++.+.- ..-.+-+..|-.+|.++ .||.|++++..|+++..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 445688999999999999999999865 68999999986532 11223355688888888 89999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.|+|+||+++|+|.++++..+ .+++..++.++.+|+.|++||| +.|||||||||+|||+|.|+++||+|||.|
T Consensus 149 LYFvLe~A~nGdll~~i~K~G----sfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsA 221 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYG----SFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSA 221 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhC----cchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeecccc
Confidence 999999999999999999875 5889999999999999999999 999999999999999999999999999999
Q ss_pred ccccccccc------------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHH
Q 002155 830 RLISACETH------------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVG 897 (959)
Q Consensus 830 ~~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~ 897 (959)
+.+.+.... ....++||..|.+||++.....++.+|+|+|||++|+|+.|.+||....+-
T Consensus 222 K~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney-------- 293 (604)
T KOG0592|consen 222 KILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY-------- 293 (604)
T ss_pred ccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH--------
Confidence 887532111 114589999999999999999999999999999999999999999764322
Q ss_pred HHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 898 WVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+.+.+..... ..+..+.....+|+.+.+..||.+|++++||.++
T Consensus 294 liFqkI~~l~y----------~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 294 LIFQKIQALDY----------EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred HHHHHHHHhcc----------cCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 12222222111 1112222456788889999999999999998775
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-41 Score=351.20 Aligned_cols=254 Identities=28% Similarity=0.456 Sum_probs=203.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCC-CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCC--ceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE--EKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 755 (959)
.+|...+.||+|+||.||.+...+ |...|||.+........+.+.+|+.++++++|||||+++|...... ..++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 456678899999999999998764 8999999987654333567889999999999999999999855544 5899999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-CCcEEEccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE-EFEAKVADFGLARLISA 834 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~ 834 (959)
|+++|+|.+++....+ .+++..+..++.||++||+||| ++|||||||||+|||++. ++.+||+|||.++....
T Consensus 97 y~~~GsL~~~~~~~g~---~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG---KLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred ccCCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 9999999999988663 5899999999999999999999 999999999999999999 79999999999987653
Q ss_pred --ccccccccccccccccCCCcCCCCC-CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 835 --CETHVSTDIAGTFGYIPPEYGQSGR-STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 835 --~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
..........||+.|||||++..+. ..+++||||+||++.||+||++||..- .....++........
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~------~~~~~~~~~ig~~~~---- 240 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF------FEEAEALLLIGREDS---- 240 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh------cchHHHHHHHhccCC----
Confidence 2223344578999999999998643 345999999999999999999998542 122333333332221
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 953 (959)
.|.+ +........+++.+|+..||++||||++++.+-
T Consensus 241 -~P~i----p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 241 -LPEI----PDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred -CCCC----CcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 1211 222344566788899999999999999999864
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=357.22 Aligned_cols=253 Identities=24% Similarity=0.303 Sum_probs=204.9
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
..++|+..++||+|+||+||.|+.+ +|..+|+|++++.. ....+....|-.+|...++|+||++|..|++.+..|+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 5688999999999999999999865 69999999998753 3445567889999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||++|||+..++.... .+++..+..++.+++.|++.+| +.|+|||||||+|+|||..|++||+|||+|.-.
T Consensus 219 iMEylPGGD~mTLL~~~~----~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKD----TLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEEecCCccHHHHHHhcC----cCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchh
Confidence 999999999999998765 6899999999999999999999 899999999999999999999999999998432
Q ss_pred cc----------------------cccc------------------------ccccccccccccCCCcCCCCCCCCcCcc
Q 002155 833 SA----------------------CETH------------------------VSTDIAGTFGYIPPEYGQSGRSTTRGDV 866 (959)
Q Consensus 833 ~~----------------------~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv 866 (959)
.. .+.. .....+|||.|||||++.+..|+..+|+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw 371 (550)
T KOG0605|consen 292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW 371 (550)
T ss_pred hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence 10 0000 0012469999999999999999999999
Q ss_pred hhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC-
Q 002155 867 YSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT- 945 (959)
Q Consensus 867 wslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps- 945 (959)
||+|||+|||+.|.+||..+.+...-..+..|...-. .|. ..+...+..++|.+|+. ||++|..
T Consensus 372 WSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~---------fP~-----~~~~s~eA~DLI~rll~-d~~~RLG~ 436 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLK---------FPE-----EVDLSDEAKDLITRLLC-DPENRLGS 436 (550)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc---------CCC-----cCcccHHHHHHHHHHhc-CHHHhcCc
Confidence 9999999999999999987655533333333321111 111 11122466788889999 9999974
Q ss_pred --HHHHHH
Q 002155 946 --MLHVLK 951 (959)
Q Consensus 946 --~~ell~ 951 (959)
++||.+
T Consensus 437 ~G~~EIK~ 444 (550)
T KOG0605|consen 437 KGAEEIKK 444 (550)
T ss_pred ccHHHHhc
Confidence 666654
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-42 Score=357.71 Aligned_cols=262 Identities=24% Similarity=0.305 Sum_probs=205.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHH-HHHHHHHHHhcCC-CCceeccccceecCC-ceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHR-EFTAEMETLGKVK-HQNLVPLLGYCSFDE-EKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~-~~~~e~~~l~~l~-h~niv~~~~~~~~~~-~~~lv 753 (959)
.++|.+.++||.|.||.||+|+-. +|..||||++++.-..+.+ .-.+|+..++++. ||||+++.+++.+.+ ..++|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 467888999999999999999854 6899999998764333222 2358999999998 999999999998888 89999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
||||+. +|.++++++. ..+++.++..|+.||++||+|+| .+|+.|||+||+|||+.....+||+|||+|+...
T Consensus 89 fE~Md~-NLYqLmK~R~---r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 89 FEFMDC-NLYQLMKDRN---RLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred HHhhhh-hHHHHHhhcC---CcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccccc
Confidence 999966 9999998874 68999999999999999999999 8999999999999999999999999999999886
Q ss_pred cccccccccccccccccCCCcC-CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc---
Q 002155 834 ACETHVSTDIAGTFGYIPPEYG-QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA--- 909 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 909 (959)
.... .+.++.|.+|+|||++ ..+.|+.+.||||+|||++|+.+-++-|.+..+-++- ..+.+.+......
T Consensus 162 SkpP--YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi----~KIc~VLGtP~~~~~~ 235 (538)
T KOG0661|consen 162 SKPP--YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQI----YKICEVLGTPDKDSWP 235 (538)
T ss_pred cCCC--cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHH----HHHHHHhCCCccccch
Confidence 5443 3567889999999965 5566899999999999999999999988664332111 1111111111110
Q ss_pred ---------cccCccccC----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 910 ---------DVLDPTVLT----ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 910 ---------~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...-|...+ .-........++++.+|+.+||++||||+|++++
T Consensus 236 eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 236 EGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred hHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 111111111 1122356678889999999999999999999874
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-42 Score=375.05 Aligned_cols=257 Identities=26% Similarity=0.473 Sum_probs=215.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
....+.++||.|.||+||+|+++ ....||||.++.. ......+|..|+.+|.+++||||+++.|+.......++|
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi 708 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII 708 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence 34556789999999999999975 2457999999864 355667899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
+|||++|+|+.|++.+.++ +.+-+...++.+||.|+.||- +.++||||+.++|||++.+..+|++|||+++...
T Consensus 709 TEyMENGsLDsFLR~~DGq---ftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvle 782 (996)
T KOG0196|consen 709 TEYMENGSLDSFLRQNDGQ---FTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 782 (996)
T ss_pred hhhhhCCcHHHHHhhcCCc---eEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeecc
Confidence 9999999999999998754 677789999999999999999 8999999999999999999999999999999876
Q ss_pred cccccccccccc--cccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 834 ACETHVSTDIAG--TFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 834 ~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
.+.....+...| ..+|.|||.+..++++.+|||||||++|||.++ |..||.... .++.+ ..+..+
T Consensus 783 dd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS----NQdVI----kaIe~g---- 850 (996)
T KOG0196|consen 783 DDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS----NQDVI----KAIEQG---- 850 (996)
T ss_pred cCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccc----hHHHH----HHHHhc----
Confidence 544333333333 569999999999999999999999999999998 999975432 22222 222222
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.+-+.+.+++..+.+||..||++|-.+||.+.||+..|.++..
T Consensus 851 -----yRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 851 -----YRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred -----cCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 1223355677789999999999999999999999999999854
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=320.73 Aligned_cols=262 Identities=26% Similarity=0.365 Sum_probs=209.5
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh--hHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ--GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
++|...+++|+|.||.||+|++. +|+.||||+++..... ......+|++.++.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 46888899999999999999864 7999999998754322 23456789999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|++. +|+..+++.. ..+...++..++.++.+|++||| .+.|+|||+||.|+|++++|.+||+|||+|+.+.+.
T Consensus 82 fm~t-dLe~vIkd~~---i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKN---IILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred eccc-cHHHHhcccc---cccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 9965 9999998765 46788999999999999999999 899999999999999999999999999999998765
Q ss_pred cccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
..... ..+.|.+|+|||.+.+. .|+..+||||.|||+.||+-|.+-|.+. .+-+....+.+.........+.+.
T Consensus 155 ~~~~~-~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~----sDidQL~~If~~LGTP~~~~WP~~ 229 (318)
T KOG0659|consen 155 NRIQT-HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGD----SDIDQLSKIFRALGTPTPDQWPEM 229 (318)
T ss_pred Ccccc-cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCC----chHHHHHHHHHHcCCCCcccCccc
Confidence 44333 33779999999976654 6899999999999999999987765442 222334444455444443333332
Q ss_pred cccCC--------------CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTA--------------DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~--------------~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...+. .-.......++++.+|+..||.+|++++|++++
T Consensus 230 ~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 230 TSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 11111 112344456899999999999999999999864
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=355.03 Aligned_cols=263 Identities=28% Similarity=0.337 Sum_probs=208.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecC--CceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD--EEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 752 (959)
.+.|+..++||+|.||.||+|++ .+|+.||+|+++.+. ........+|+.+|++++||||+++.+...+. ...|+
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 45677888999999999999986 479999999987654 44455567999999999999999999998776 68999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
|+|||++ ||..++.... ..+++.++..+++|++.||+|+| .+||+|||||.+|||+|.+|.+||+|||+|+.+
T Consensus 196 VFeYMdh-DL~GLl~~p~---vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPG---VKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFY 268 (560)
T ss_pred EEecccc-hhhhhhcCCC---cccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeec
Confidence 9999988 8988887654 45889999999999999999999 999999999999999999999999999999988
Q ss_pred ccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc-
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD- 910 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 910 (959)
........+..+-|.+|+|||++.+. .|+.++|+||.|||+.||++|++.|.+..+- +....+.+.........
T Consensus 269 ~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEv----eQl~kIfklcGSP~e~~W 344 (560)
T KOG0600|consen 269 TPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEV----EQLHKIFKLCGSPTEDYW 344 (560)
T ss_pred cCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHH----HHHHHHHHHhCCCChhcc
Confidence 87666667788899999999977665 6999999999999999999999998764221 11111211111111111
Q ss_pred ---------ccCcccc-----CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 911 ---------VLDPTVL-----TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 911 ---------~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
.+.|... ......+....++|+..++..||++|.||.+++.
T Consensus 345 ~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 345 PVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 1111110 0012234456788999999999999999999875
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=351.28 Aligned_cols=249 Identities=27% Similarity=0.398 Sum_probs=209.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
..|+..+.||+|+||.||+|.+. .++.||+|++.-+. ..+.+++.+|+.++++++++||.++|+.|..+...|++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 45777889999999999999865 68899999997543 44567899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
|.||++.+.++... .+++.....++.++..|+.|+| ..+.+|||||+.||++..+|.||++|||++.......
T Consensus 93 ~~gGsv~~lL~~~~----~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGN----ILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred hcCcchhhhhccCC----CCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 99999999998654 3477778889999999999999 8999999999999999999999999999998876533
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
. ....++||+.|||||++....|+.|+||||+|++.+||.+|.+|+....+- .....+....
T Consensus 166 ~-rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm-----------------rvlflIpk~~ 227 (467)
T KOG0201|consen 166 K-RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM-----------------RVLFLIPKSA 227 (467)
T ss_pred h-ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc-----------------eEEEeccCCC
Confidence 3 336789999999999999889999999999999999999999998653221 1111112222
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+....++...+.+++..|+++||+.||+|.+++++
T Consensus 228 PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 228 PPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred CCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 222233666678899999999999999999999875
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=352.09 Aligned_cols=247 Identities=30% Similarity=0.425 Sum_probs=209.5
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
++|.+.+.||+|+||.||||+.+ +.+.||+|.+.+.. ..+.+.+.+|+++++.++|||||.++++|....+.|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 57888899999999999999876 68899999987643 3456678999999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+.| +|..++.... .++++.+..++.+++.||.||| +.+|.|||+||.|||++.++.+|+||||+|+..+.
T Consensus 82 ~a~g-~L~~il~~d~----~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~- 152 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG----KLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST- 152 (808)
T ss_pred hhhh-hHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhccc-
Confidence 9987 9999998765 5899999999999999999999 89999999999999999999999999999998764
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
.....+...|||.|||||+..+++|+..+|.||+||++||+++|++||... .+...+...... |.
T Consensus 153 ~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-------si~~Lv~~I~~d--------~v 217 (808)
T KOG0597|consen 153 NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-------SITQLVKSILKD--------PV 217 (808)
T ss_pred CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-------HHHHHHHHHhcC--------CC
Confidence 344455678999999999999999999999999999999999999999642 222222222211 11
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. .+......+..++...+.+||.+|.+..+++.+
T Consensus 218 ~---~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 218 K---PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred C---CcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 1 122455678888899999999999999998754
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-40 Score=321.98 Aligned_cols=236 Identities=26% Similarity=0.369 Sum_probs=198.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh---hHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ---GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|+..+.||.|+||.|..++.+ +|..||+|++.+.... ..+....|..+++.+.||+++++++.|.+.+..|+||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 56888999999999999999976 5889999999765433 2344567999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||++||.|..+++..+ ++++..+..+|.||+.|++||| +.+|++||+||+|||+|.+|.+||+|||+|+....
T Consensus 124 eyv~GGElFS~Lrk~~----rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSG----RFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred eccCCccHHHHHHhcC----CCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 9999999999999865 6888999999999999999999 89999999999999999999999999999998753
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. .-..+|||.|+|||++.+++|..++|+|||||++|||+.|.+||....+ ..+.+.+-.+... .|
T Consensus 197 r----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--------~~iY~KI~~~~v~---fP 261 (355)
T KOG0616|consen 197 R----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--------IQIYEKILEGKVK---FP 261 (355)
T ss_pred c----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--------HHHHHHHHhCccc---CC
Confidence 2 4457999999999999999999999999999999999999999976433 1234444443221 22
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCC
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMR 943 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~R 943 (959)
...+ ..+.+++...++.|-.+|
T Consensus 262 ~~fs-------~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 262 SYFS-------SDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred cccC-------HHHHHHHHHHHhhhhHhh
Confidence 2222 345566667777788777
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=345.33 Aligned_cols=264 Identities=26% Similarity=0.395 Sum_probs=213.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhh-HHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQG-HREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.....+.++||+|.||+|..+....+..||||+++...... ..+|.+|+++|.+++|||||+++|+|..++..++++||
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 34566789999999999999999878999999998765544 47899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++|+|..|+....... .....-.+|+.||+.|++||. +.++||||+.++|+|++.++++||+|||+++.+...+
T Consensus 617 mEnGDLnqFl~aheapt--~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELPT--AETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HhcCcHHHHHHhccCcc--cccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCC
Confidence 99999999998764221 344556789999999999999 8899999999999999999999999999999765544
Q ss_pred ccccc-cccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh--CCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 837 THVST-DIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT--GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 837 ~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.+... ..+-+.+|||||.+.-+++++++|||+||+++||+++ ...||....++ ...+..-...+.. .
T Consensus 692 yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e----~vven~~~~~~~~------~ 761 (807)
T KOG1094|consen 692 YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE----QVVENAGEFFRDQ------G 761 (807)
T ss_pred ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH----HHHHhhhhhcCCC------C
Confidence 44433 3345679999999999999999999999999999976 77887543222 1221111111111 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
+......+.-+..++++++..||+.|-++||+++++...|.+.
T Consensus 762 ~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 762 RQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1222334455667899999999999999999999999998875
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=352.31 Aligned_cols=257 Identities=28% Similarity=0.453 Sum_probs=206.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+++..++.||+|+||+||+|+|. -.||||++.... .+..+.|+.|+.++++-+|.||+-+.|||..+.. .||+.|
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqw 468 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQW 468 (678)
T ss_pred HHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehh
Confidence 34556789999999999999994 359999987543 4456789999999999999999999999988777 999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc-
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC- 835 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~- 835 (959)
|+|-+|..+++... ..++..+...||+|||+|+.||| .++|||||+|+.||++.+++.|||+|||++..-...
T Consensus 469 CeGsSLY~hlHv~e---tkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~ 542 (678)
T KOG0193|consen 469 CEGSSLYTHLHVQE---TKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWS 542 (678)
T ss_pred ccCchhhhhccchh---hhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccceeeeeeec
Confidence 99999999998766 46888999999999999999999 999999999999999999999999999999654322
Q ss_pred cccccccccccccccCCCcCCCC---CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSG---RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
.........|...|||||++..+ +|++.+||||||+++|||+||..||.....+. +.-++.++... .
T Consensus 543 g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq--------IifmVGrG~l~--p 612 (678)
T KOG0193|consen 543 GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ--------IIFMVGRGYLM--P 612 (678)
T ss_pred cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh--------eEEEecccccC--c
Confidence 11222233578899999987643 68999999999999999999999997432221 11112222111 1
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
| ......++...|.+|+..||..+|++||.+.+|+..|+++.
T Consensus 613 d---~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~ 654 (678)
T KOG0193|consen 613 D---LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELL 654 (678)
T ss_pred c---chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhh
Confidence 1 12223456667888999999999999999999999888763
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=346.16 Aligned_cols=239 Identities=27% Similarity=0.446 Sum_probs=200.9
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCHH
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLD 763 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~ 763 (959)
.+.+|.|+.|.||.|+++ ++.||||+++.-+ ..+++-+++++||||+.+.|+|.....+|||||||..|-|.
T Consensus 129 LeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 567999999999999994 7889999986432 24788899999999999999999999999999999999999
Q ss_pred HHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccccccc
Q 002155 764 LWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDI 843 (959)
Q Consensus 764 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 843 (959)
..++... ++.......|..+||.|+.||| ...|||||+|.-||||..+..|||+|||.++..... ..++.+
T Consensus 201 ~VLka~~----~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMSF 271 (904)
T KOG4721|consen 201 EVLKAGR----PITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMSF 271 (904)
T ss_pred HHHhccC----ccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhhh
Confidence 9998765 6777888999999999999999 889999999999999999999999999999887643 445678
Q ss_pred cccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHH
Q 002155 844 AGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKP 923 (959)
Q Consensus 844 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (959)
+||..|||||++...+.+.|+|||||||++|||+||..||... .. . .+.-+.....+ .-+.+..
T Consensus 272 aGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdV----ds---s-----AIIwGVGsNsL----~LpvPst 335 (904)
T KOG4721|consen 272 AGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDV----DS---S-----AIIWGVGSNSL----HLPVPST 335 (904)
T ss_pred hhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCcccc----ch---h-----eeEEeccCCcc----cccCccc
Confidence 9999999999999999999999999999999999999998532 10 0 11111111111 1123444
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 924 MMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 924 ~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
++..|.-|+++||+..|..||++.+|+.+|+-
T Consensus 336 cP~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 336 CPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred CchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 55677788999999999999999999999864
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=350.94 Aligned_cols=250 Identities=28% Similarity=0.435 Sum_probs=205.6
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc----ch-hhHHHHHHHHHHHhcCC-CCceeccccceecCCc
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA----KT-QGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEE 749 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~----~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~ 749 (959)
..++|.+++.||+|+||+|+.|... +++.||+|.+... .. ...+.+.+|+.+++.++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 4568999999999999999999754 6899999977653 12 23445678999999999 9999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC-CcEEEccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE-FEAKVADFGL 828 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~ 828 (959)
.++||||+.||+|.+++.... ++.+.++.+++.|++.|++|+| ++||+||||||+|++++.+ +.+||+|||+
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g----~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~ 167 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKG----RLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGL 167 (370)
T ss_pred EEEEEEecCCccHHHHHHHcC----CCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEecccc
Confidence 999999999999999998843 5788999999999999999999 8999999999999999999 9999999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCC-CC-CcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGR-ST-TRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
+.... .........+||+.|+|||++.+.. |+ .++||||+||++|-|++|..||... +... ....+..+
T Consensus 168 s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~-------~~~~-l~~ki~~~ 238 (370)
T KOG0583|consen 168 SAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS-------NVPN-LYRKIRKG 238 (370)
T ss_pred ccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc-------cHHH-HHHHHhcC
Confidence 98763 2334456679999999999999977 74 8999999999999999999999752 1111 22223332
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
... -|.... ......++.+|+..||.+|+++.+|+.
T Consensus 239 ~~~---~p~~~~------S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 239 EFK---IPSYLL------SPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred Ccc---CCCCcC------CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 111 111110 456788999999999999999999983
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-39 Score=356.84 Aligned_cols=262 Identities=29% Similarity=0.445 Sum_probs=204.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc------CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecC-C
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL------PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFD-E 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-~ 748 (959)
.++|++.++||+|+||.||+|.+ .+++.||||++.... ......+.+|+.+++.+ +||||++++++|... +
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 46789999999999999999974 235689999987533 23345688999999999 899999999988654 4
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCC--------------------------------------------------------
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGS-------------------------------------------------------- 772 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~-------------------------------------------------------- 772 (959)
..++||||+++|+|.++++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 678999999999999999753211
Q ss_pred --ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc-cccccccccc
Q 002155 773 --LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV-STDIAGTFGY 849 (959)
Q Consensus 773 --~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y 849 (959)
..++++.++..++.||++||+||| +.||+||||||+||+++.++.+||+|||+++......... .....+++.|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 134778889999999999999999 8999999999999999999999999999997653322211 1223456789
Q ss_pred cCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHH
Q 002155 850 IPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKM 928 (959)
Q Consensus 850 ~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 928 (959)
+|||++.+..++.++|||||||++|||++ |..||...... ..+...+..+.... . +......+
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~-------~~~~~~~~~~~~~~-----~----~~~~~~~l 306 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN-------EEFCQRLKDGTRMR-----A----PENATPEI 306 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc-------HHHHHHHhcCCCCC-----C----CCCCCHHH
Confidence 99999998899999999999999999997 99998643211 11122222221110 0 11233467
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 929 LRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 929 ~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.+++.+||+.||++|||+.|+++.|+++..
T Consensus 307 ~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 307 YRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 899999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=326.00 Aligned_cols=248 Identities=23% Similarity=0.373 Sum_probs=210.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchh---hHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQ---GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
..+|++.+.||+|.||+|-+|.. ..|+.||||.+++.... +.-.+++|+++|+.++||||+.+|.+|...+...+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 45788889999999999999985 57999999999876543 444578999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||..+|.|.||+..++ .+++.++.+++.||..|+.|+| ..++||||+|.+|||+|+++.+||+|||++-.+.
T Consensus 132 MEYaS~GeLYDYiSer~----~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG----SLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEecCCccHHHHHHHhc----cccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhc
Confidence 99999999999998876 5899999999999999999999 8999999999999999999999999999998775
Q ss_pred cccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
. ...-..++|++-|.+||++.+.+| ++.+|.||+||++|-++.|..||++... ..+.+++..+...+
T Consensus 205 ~--~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh--------k~lvrQIs~GaYrE-- 272 (668)
T KOG0611|consen 205 D--KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH--------KRLVRQISRGAYRE-- 272 (668)
T ss_pred c--ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH--------HHHHHHhhcccccC--
Confidence 3 334457899999999999999998 6899999999999999999999975321 12334444443332
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 953 (959)
|...+ ...-+|++|+..+|++|.|+.+|..+-
T Consensus 273 -P~~PS--------dA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 273 -PETPS--------DASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred -CCCCc--------hHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 22111 234578899999999999999998763
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-39 Score=350.03 Aligned_cols=243 Identities=26% Similarity=0.385 Sum_probs=202.4
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 751 (959)
..++|...++||+|+||+|+.|..+ +++.||||++++.. .++.+....|.+++... +||.+++++..|++.++.|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 4578999999999999999999876 57899999998754 34556677788887777 5999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||+.||++..+.+. +.+++..+..+|..|+.||.||| ++||||||+|-+|||+|.+|++||+|||+|+.
T Consensus 446 fvmey~~Ggdm~~~~~~-----~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIHT-----DVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEEecCCCcEEEEEec-----ccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccccc
Confidence 99999999995554443 35899999999999999999999 89999999999999999999999999999986
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
--. ......+++|||.|||||++.+..|+.++|+|||||++|||+.|..||.++.++ .+.+.+....
T Consensus 518 ~m~-~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe--------e~FdsI~~d~---- 584 (694)
T KOG0694|consen 518 GMG-QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE--------EVFDSIVNDE---- 584 (694)
T ss_pred cCC-CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHhcCC----
Confidence 432 223456789999999999999999999999999999999999999999764332 2333333321
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM 946 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 946 (959)
..++.-+..+.+.++++++.++|++|.-+
T Consensus 585 ------~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 585 ------VRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ------CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 12233455677888999999999999865
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=376.76 Aligned_cols=258 Identities=30% Similarity=0.470 Sum_probs=209.0
Q ss_pred CCCCCCeeccCCCeEEEEEEcC--CCC----EEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP--DGK----TVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~--~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
..+..+.||+|+||.||.|... +|. .||||.+.+. +.++..+|.+|..+|++++|||||+++|+|.+....++
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 3445788999999999999864 343 4999998765 46667889999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcC---CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTG---SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
++|||++|+|..|+++... ....+...+...++.|||+|+.||+ ++++|||||.++|+|++....|||+|||+|
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccchh
Confidence 9999999999999998632 2345788899999999999999999 899999999999999999999999999999
Q ss_pred cccccccccccccc-cccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 830 RLISACETHVSTDI-AGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 830 ~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
+.....+.+..... .-...|||||.+..+.|+.|+|||||||++||++| |..||... ...+....+ .+.+
T Consensus 850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~----~n~~v~~~~---~~gg- 921 (1025)
T KOG1095|consen 850 RDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSR----SNFEVLLDV---LEGG- 921 (1025)
T ss_pred HhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCc----chHHHHHHH---HhCC-
Confidence 96554444433333 22469999999999999999999999999999999 77887542 222222211 1211
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
-+ +.+.-+...+.++|.+||+.+|++||++..|++.+.++.
T Consensus 922 ---RL------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~ 962 (1025)
T KOG1095|consen 922 ---RL------DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAIS 962 (1025)
T ss_pred ---cc------CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhh
Confidence 11 123334557889999999999999999999999887763
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=306.61 Aligned_cols=263 Identities=25% Similarity=0.319 Sum_probs=212.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEE-cCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCC-----ceE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE-----EKL 751 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~ 751 (959)
.++|++.+.+|+|||+-||.++ ..+++.||+|++.....++.+...+|++..++++||||++++++...+. +.|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 4689999999999999999998 4578999999998777777888999999999999999999999875443 489
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH--IIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
++++|...|+|.+.++....+...+++.+.++|+.+|++||++|| +.. +.||||||.||++.+.+.+++.|||.+
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH---~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALH---EKEPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHh---ccCCcccccCCCcceeEecCCCceEEEeccCc
Confidence 999999999999999988877778999999999999999999999 555 999999999999999999999999998
Q ss_pred cccccccc--------cccccccccccccCCCcCCC---CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHH
Q 002155 830 RLISACET--------HVSTDIAGTFGYIPPEYGQS---GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGW 898 (959)
Q Consensus 830 ~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 898 (959)
+...-.-. +.......|..|+|||.+.- ...+.++|||||||++|+|+.|..||...... ++.+.-
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~--GgSlaL- 253 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ--GGSLAL- 253 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc--CCeEEE-
Confidence 76431100 00112246889999997543 34689999999999999999999999765442 111110
Q ss_pred HHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 899 VFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
....+...-+........+.+++.+|+++||.+||++.+++.++.++.
T Consensus 254 -----------Av~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 254 -----------AVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred -----------eeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 111112222222336678999999999999999999999999998764
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=317.30 Aligned_cols=264 Identities=26% Similarity=0.293 Sum_probs=204.2
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhh--HHHHHHHHHHHhcCCCCceeccccceec--CCceE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQG--HREFTAEMETLGKVKHQNLVPLLGYCSF--DEEKL 751 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~ 751 (959)
..++|++.+.|++|.||.||+|+++ +++.||+|+++...... .-.-.+|+.++.+++|||||.+-.+... -+..|
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 3467888999999999999999976 68899999998654322 2235689999999999999999877643 46799
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+|||||+. ||...++... +++...++..+..|+++|++||| ...|+|||+||+|+|+...|.+||+|||+|+.
T Consensus 154 ~VMe~~Eh-DLksl~d~m~---q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ 226 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMETMK---QPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLARE 226 (419)
T ss_pred eeHHHHHh-hHHHHHHhcc---CCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhh
Confidence 99999987 9999998876 57888999999999999999999 88999999999999999999999999999999
Q ss_pred cccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
++.. ....+..+-|.+|+|||.+.+. .|+++.||||+|||+.|++++++-|.+..+- +....+.+.+.......
T Consensus 227 ygsp-~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~----dQl~~If~llGtPte~i 301 (419)
T KOG0663|consen 227 YGSP-LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI----DQLDKIFKLLGTPSEAI 301 (419)
T ss_pred hcCC-cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH----HHHHHHHHHhCCCcccc
Confidence 8754 3344567889999999977665 5899999999999999999999988654321 12222333332222111
Q ss_pred ccCccc--------cCCCC----------HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 VLDPTV--------LTADS----------KPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 ~~~~~~--------~~~~~----------~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+..-.. .+..+ ......-++++...+..||.+|.||+|.+++
T Consensus 302 wpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 302 WPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred CCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 111000 00000 0022345678888999999999999998864
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=328.38 Aligned_cols=280 Identities=30% Similarity=0.438 Sum_probs=217.0
Q ss_pred ccCCCCCCcccccccccccCccccCHHHHHHHhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHH
Q 002155 646 LSSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAE 725 (959)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e 725 (959)
.|+|.+..|+.++.++..+ ....+.||+|.||+||+|+|+ |+.||||++...++ +...+|
T Consensus 194 tSGSGSGlplLVQRTiarq----------------I~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE---~SWfrE 253 (513)
T KOG2052|consen 194 TSGSGSGLPLLVQRTIARQ----------------IVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDE---RSWFRE 253 (513)
T ss_pred cCCCCCCchhHhHHhhhhe----------------eEEEEEecCccccceeecccc-CCceEEEEecccch---hhhhhH
Confidence 4566666666665554433 345788999999999999995 89999999975333 234455
Q ss_pred HHHHh--cCCCCceeccccceecC----CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC
Q 002155 726 METLG--KVKHQNLVPLLGYCSFD----EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF 799 (959)
Q Consensus 726 ~~~l~--~l~h~niv~~~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ 799 (959)
.++++ .++|+||..+++.-..+ .+.|+|++|.+.|+|.||+.... ++....++++..+|.||+|||...
T Consensus 254 tEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~t-----v~~~~ml~LalS~AsGLaHLH~eI 328 (513)
T KOG2052|consen 254 TEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNT-----VTTEGMLKLALSIASGLAHLHMEI 328 (513)
T ss_pred HHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhcc-----CCHHHHHHHHHHHhhhHHHHHHHH
Confidence 55555 45999999999875433 36799999999999999998743 788999999999999999999332
Q ss_pred -----CCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc---cccccccccccCCCcCCCCC----C--CCcCc
Q 002155 800 -----TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV---STDIAGTFGYIPPEYGQSGR----S--TTRGD 865 (959)
Q Consensus 800 -----~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~----~--~~~~D 865 (959)
+++|.|||||+.|||+..++.+.|+|+|+|.......... .+..+||.+|||||++...- + -..+|
T Consensus 329 ~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~AD 408 (513)
T KOG2052|consen 329 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRAD 408 (513)
T ss_pred hcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHH
Confidence 6789999999999999999999999999998776543322 34568999999999876542 1 34689
Q ss_pred chhHHHHHHHHHhC----------CCCCCCCCccccCCchHHHHHHHhhcCccccccCccccC-CCCHHHHHHHHHHHHH
Q 002155 866 VYSFGVILLELVTG----------KEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT-ADSKPMMLKMLRIAGD 934 (959)
Q Consensus 866 vwslG~il~elltg----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~ 934 (959)
|||||.++||+..+ +.||....+.+. -.+.++.....+..+|.+.. ....+.+..+.++|+.
T Consensus 409 IYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP-------s~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMke 481 (513)
T KOG2052|consen 409 IYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP-------SFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKE 481 (513)
T ss_pred HHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC-------CHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHH
Confidence 99999999999864 356654433222 13445555566666666644 3467788899999999
Q ss_pred cccCCCCCCCCHHHHHHHHHhhh
Q 002155 935 CLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 935 cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
||..+|..|.||-.+.+.|.++.
T Consensus 482 CW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 482 CWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred hhcCCchhhhHHHHHHHHHHHHh
Confidence 99999999999999999999875
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=352.02 Aligned_cols=252 Identities=31% Similarity=0.467 Sum_probs=204.2
Q ss_pred CCCCCeeccCCCeEEEEEEcCC--C--CE-EEEEEccc---cchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 681 FCKTNIIGDGGFGTVYKAALPD--G--KT-VAVKKLSQ---AKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~~--~--~~-vavK~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
....++||+|+||.||+|+++. + .. ||||..+. .......++.+|+++|++++|||||++||++..+...++
T Consensus 159 v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~i 238 (474)
T KOG0194|consen 159 IELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLML 238 (474)
T ss_pred ccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEE
Confidence 3446899999999999998652 2 23 89999875 335567789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
|||+|.||+|.++++...+ .++..++..++.++|+||+||| +.+++||||.++|+|++.++.+||+|||+++..
T Consensus 239 vmEl~~gGsL~~~L~k~~~---~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 239 VMELCNGGSLDDYLKKNKK---SLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAG 312 (474)
T ss_pred EEEecCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCccccccCC
Confidence 9999999999999998763 5888999999999999999999 899999999999999999999999999998754
Q ss_pred cccccccccc-c-cccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHh-hcCcc
Q 002155 833 SACETHVSTD-I-AGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKM-KKGQA 908 (959)
Q Consensus 833 ~~~~~~~~~~-~-~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~ 908 (959)
. .+.... . .-+.+|+|||.+..+.|+.++|||||||++||+++ |..||.+.... .+...+ ..+..
T Consensus 313 ~---~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--------~v~~kI~~~~~r 381 (474)
T KOG0194|consen 313 S---QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--------EVKAKIVKNGYR 381 (474)
T ss_pred c---ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--------HHHHHHHhcCcc
Confidence 3 111111 1 24569999999999999999999999999999999 88887653221 233333 22211
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
... +...+..+..++.+||..||++||+|.++.+.++.+..
T Consensus 382 ~~~---------~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~ 422 (474)
T KOG0194|consen 382 MPI---------PSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEK 422 (474)
T ss_pred CCC---------CCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHh
Confidence 111 11233456677889999999999999999999998753
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=342.45 Aligned_cols=247 Identities=25% Similarity=0.352 Sum_probs=206.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.-|+.++-||+|+.|.|..|+. .+|+.+|||.+.+.. ......+.+|+-+|+-+.||||+++|+++....+.|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 3467788999999999999986 479999999987652 223455789999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||++||-|.+++...+ ++++.++.+++.||+.|++|+| ..+|+|||+||+|+|+|..+++||+|||+|.....
T Consensus 92 Eyv~gGELFdylv~kG----~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKG----PLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP 164 (786)
T ss_pred EecCCchhHHHHHhhC----CCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecccC
Confidence 9999999999998776 5888999999999999999999 88999999999999999999999999999976432
Q ss_pred ccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
...-.+.+|+|.|.|||++.+.+| +.++||||+|||+|.|+||+.||+.+. .......+..+... .
T Consensus 165 --gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN--------ir~LLlKV~~G~f~---M 231 (786)
T KOG0588|consen 165 --GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN--------IRVLLLKVQRGVFE---M 231 (786)
T ss_pred --CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc--------HHHHHHHHHcCccc---C
Confidence 233345699999999999999998 689999999999999999999997421 22234444444221 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
|.. ......+|+.+|++.||++|.|++||+++
T Consensus 232 Ps~-------Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 232 PSN-------ISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred CCc-------CCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 222 22356678888999999999999999986
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=338.64 Aligned_cols=247 Identities=19% Similarity=0.311 Sum_probs=198.8
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhh---HHHHHHHHHHHhcCCCCceeccccceec----CCceEEEEEe
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQG---HREFTAEMETLGKVKHQNLVPLLGYCSF----DEEKLLVYEY 756 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~ 756 (959)
...||+|++|.||+|.+ +|+.||||+++...... .+.+.+|+.++++++||||+++++++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999998 68999999987653332 4667899999999999999999999866 3467899999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++|+|.++++... .+++..+..++.|++.|++|+|. ..+++||||||+||+++.++.+||+|||+++......
T Consensus 104 ~~~g~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~ 177 (283)
T PHA02988 104 CTRGYLREVLDKEK----DLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP 177 (283)
T ss_pred CCCCcHHHHHhhCC----CCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc
Confidence 99999999997643 57889999999999999999993 2488999999999999999999999999997654221
Q ss_pred ccccccccccccccCCCcCCC--CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 837 THVSTDIAGTFGYIPPEYGQS--GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
....|+..|+|||++.+ ..++.++|||||||++|||++|+.||...... + +...+..... .+
T Consensus 178 ----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~----~----~~~~i~~~~~----~~ 241 (283)
T PHA02988 178 ----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK----E----IYDLIINKNN----SL 241 (283)
T ss_pred ----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH----H----HHHHHHhcCC----CC
Confidence 23457889999999876 67899999999999999999999999643211 1 1122211111 11
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. .+.++...+.+++.+||+.||++|||++|+++.|++++
T Consensus 242 ~----~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 242 K----LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred C----CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 1 11123456889999999999999999999999999875
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=303.06 Aligned_cols=249 Identities=27% Similarity=0.403 Sum_probs=209.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++++.||+|.||.||.|+.+ ++-.||+|++.+.. .....++.+|+++-+.++||||.++|++|.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 467999999999999999999865 57889999986543 23346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
+||.++|.+...++... ...+++...+.+..|+|.|+.|+| .++|+||||||+|+|++.++..|++|||.+..-.
T Consensus 101 lEya~~gel~k~L~~~~--~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGR--MKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred EEecCCchHHHHHHhcc--cccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 99999999999998544 346888899999999999999999 8999999999999999999999999999996542
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.......+||..|.|||...+...+..+|+|++|++.||++.|.+||..... +...+.++.- +...
T Consensus 176 ---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~--------~etYkrI~k~---~~~~ 241 (281)
T KOG0580|consen 176 ---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH--------SETYKRIRKV---DLKF 241 (281)
T ss_pred ---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh--------HHHHHHHHHc---cccC
Confidence 3344567999999999999999999999999999999999999999965332 2223333332 2223
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
|.. ......++|.+|+..+|.+|..-.|++.+
T Consensus 242 p~~-------is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 242 PST-------ISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred Ccc-------cChhHHHHHHHHhccCccccccHHHHhhh
Confidence 322 23356788999999999999999999876
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=338.31 Aligned_cols=252 Identities=24% Similarity=0.374 Sum_probs=213.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCc-eEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE-KLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~lv 753 (959)
.++|+..+++|+|+||.++.++.+ +++.||+|.+..+. ....+...+|+.++++++|||||.+.+.|.+++. .+||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 357888999999999999999865 67899999987554 3334457789999999999999999999999988 9999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|+||+||++.+.+.+.. ...++++++..|+.|++.|+.||| +.+|+|||+|+.||+++.++.|||+|||+|+...
T Consensus 83 m~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~ 157 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILN 157 (426)
T ss_pred EeecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcC
Confidence 99999999999998876 346899999999999999999999 8999999999999999999999999999999887
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
... ......+||+.||.||.+.+.+|..|+||||+||++|||++-+++|... ++...+.+..+..
T Consensus 158 ~~~-~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~-------~m~~Li~ki~~~~------- 222 (426)
T KOG0589|consen 158 PED-SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS-------NMSELILKINRGL------- 222 (426)
T ss_pred Cch-hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc-------chHHHHHHHhhcc-------
Confidence 543 2345578999999999999999999999999999999999999998643 2233333322221
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..+.+......+..++..|++.+|+.||++.+++++
T Consensus 223 ---~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 ---YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ---CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 122344455678889999999999999999999876
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=322.93 Aligned_cols=253 Identities=22% Similarity=0.291 Sum_probs=204.8
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCC-CCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
+.|+..+.||+|.-|+||.++.++ +..+|+|++.+.. .....+...|.++|+.++||.++.+|+.|..+...|+||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 346667889999999999999874 5889999997654 333455678999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
|||+||+|....+...+ ..+++..+..+|.+|+.||+||| ..|||+||+||+||||.++|++.|+||.++.....
T Consensus 157 eyCpGGdL~~LrqkQp~--~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPG--KRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred ecCCCccHHHHHhhCCC--CccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 99999999999987664 46899999999999999999999 99999999999999999999999999998754310
Q ss_pred ---------------------------------c-c---------------------ccccccccccccccCCCcCCCCC
Q 002155 835 ---------------------------------C-E---------------------THVSTDIAGTFGYIPPEYGQSGR 859 (959)
Q Consensus 835 ---------------------------------~-~---------------------~~~~~~~~gt~~y~aPE~~~~~~ 859 (959)
. . ....+.++||..|.|||++.+..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0 0 01123467999999999999999
Q ss_pred CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCC
Q 002155 860 STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDN 939 (959)
Q Consensus 860 ~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 939 (959)
.+.++|+|+|||++|||+.|..||.+...... ....+.+ ...-+..........+||++.+.+|
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~T-------l~NIv~~---------~l~Fp~~~~vs~~akDLIr~LLvKd 375 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKET-------LRNIVGQ---------PLKFPEEPEVSSAAKDLIRKLLVKD 375 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCchhh-------HHHHhcC---------CCcCCCCCcchhHHHHHHHHHhccC
Confidence 99999999999999999999999976543321 1111111 1111112245567789999999999
Q ss_pred CCCCCC----HHHHHHH
Q 002155 940 PAMRPT----MLHVLKF 952 (959)
Q Consensus 940 P~~Rps----~~ell~~ 952 (959)
|.+|.. |+||.++
T Consensus 376 P~kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 376 PSKRLGSKRGAAEIKRH 392 (459)
T ss_pred hhhhhccccchHHhhcC
Confidence 999997 8887654
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=337.89 Aligned_cols=256 Identities=24% Similarity=0.375 Sum_probs=213.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC---CCC--EEEEEEccc-cchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP---DGK--TVAVKKLSQ-AKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~---~~~--~vavK~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
+..+..+.||.|.||.||+|.+. .|+ .||||..+. ...+..+.|.+|..+|+.++||||++++|+|.+ ...|+
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wi 467 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWI 467 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeE
Confidence 34455678999999999999853 233 588898876 445567789999999999999999999999974 67899
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
|||.++-|.|..|++.+. ..++..+...++.||+.||+||| +..+|||||..+|||+....-||++|||+++.+
T Consensus 468 vmEL~~~GELr~yLq~nk---~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQNK---DSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYL 541 (974)
T ss_pred EEecccchhHHHHHHhcc---ccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhc
Confidence 999999999999999876 45788899999999999999999 899999999999999999999999999999998
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.....+......-+..|||||.+.-..++.+||||-|||++||++. |..||......+ ....
T Consensus 542 ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD-----------------VI~~ 604 (974)
T KOG4257|consen 542 EDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD-----------------VIGH 604 (974)
T ss_pred cccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc-----------------eEEE
Confidence 7655554443334568999999999999999999999999999988 999997643221 1112
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
+....+.+.++.|+..+..++.+||..+|.+||.+.|+...|+++..
T Consensus 605 iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 605 IENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred ecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 22233344455666788899999999999999999999999998865
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=309.61 Aligned_cols=252 Identities=25% Similarity=0.354 Sum_probs=206.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
+++|++-++||+|.|+.||++.. .+|+.+|+|.+... ...+.+++.+|+++-+.++|||||++.+.+..+...|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 35567778899999999999864 47999999987532 3446778999999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC---CcEEEcccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE---FEAKVADFGLARL 831 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~~ 831 (959)
|+|+|++|..-+-.+ ..+++..+...+.||++++.|+| .++|||||+||.|+++... .-+||+|||+|..
T Consensus 90 e~m~G~dl~~eIV~R----~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR----EFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred ecccchHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEE
Confidence 999999996655444 25788899999999999999999 8999999999999999543 4699999999998
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
++ +......++|||+|||||++...+|+..+|||+.||++|-++.|.+||..+.. ..+.+++..+...
T Consensus 163 l~--~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~--------~rlye~I~~g~yd-- 230 (355)
T KOG0033|consen 163 VN--DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--------HRLYEQIKAGAYD-- 230 (355)
T ss_pred eC--CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH--------HHHHHHHhccccC--
Confidence 87 44555678999999999999999999999999999999999999999965321 1244555544321
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+++ ++......+..+++.+|+..||.+|.|+.|.+++
T Consensus 231 ~~~----~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 231 YPS----PEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred CCC----cccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 111 1223334456678899999999999999998865
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-38 Score=327.53 Aligned_cols=255 Identities=26% Similarity=0.351 Sum_probs=199.5
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--------------hhHHHHHHHHHHHhcCCCCceeccc
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--------------QGHREFTAEMETLGKVKHQNLVPLL 741 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------------~~~~~~~~e~~~l~~l~h~niv~~~ 741 (959)
..++|++.+.||+|.||.|-+|+.. +++.||||++.+... ...+...+|+.+|++++|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 4578999999999999999999865 689999999864211 1235688999999999999999999
Q ss_pred cceecC--CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC
Q 002155 742 GYCSFD--EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF 819 (959)
Q Consensus 742 ~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 819 (959)
.+..+. +..|+|+|||..|.+...-... ..+++.++++++.+++.||+||| ..|||||||||+|+|++++|
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~d~----~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPPDK----PELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCCCc----ccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEcCCC
Confidence 988653 6789999999988874422221 12889999999999999999999 89999999999999999999
Q ss_pred cEEEcccccccccccccc----cccccccccccccCCCcCCCCC----CCCcCcchhHHHHHHHHHhCCCCCCCCCcccc
Q 002155 820 EAKVADFGLARLISACET----HVSTDIAGTFGYIPPEYGQSGR----STTRGDVYSFGVILLELVTGKEPTGPEFKDIE 891 (959)
Q Consensus 820 ~~kl~Dfg~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~il~elltg~~p~~~~~~~~~ 891 (959)
+|||+|||.+........ ..-...+|||.|+|||...++. .+++.||||+||++|.|+.|+.||...+.
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~--- 324 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE--- 324 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH---
Confidence 999999999976632211 1112357999999999877632 36788999999999999999999965322
Q ss_pred CCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 002155 892 GGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954 (959)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 954 (959)
-.....+....... +...+....+.++|.+++++||++|.+..+|..+..
T Consensus 325 -----~~l~~KIvn~pL~f--------P~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 325 -----LELFDKIVNDPLEF--------PENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred -----HHHHHHHhcCcccC--------CCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 11233333322211 122245557889999999999999999999977653
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-38 Score=335.92 Aligned_cols=256 Identities=23% Similarity=0.375 Sum_probs=204.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.+.||+|+||.||+|.++ .+..||+|+++... ......+.+|+..+++++||||+++++++..++..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 356888999999999999999753 35689999987643 2334568899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.... ..+++.+++.++.|++.|++||| +.|++||||||+||+++.++.++++|||.+...
T Consensus 84 v~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 84 VTEYMSNGALDSFLRKHE---GQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEEeCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 999999999999997643 35789999999999999999999 899999999999999999999999999987653
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
............++..|+|||.+.+..++.++|||||||++||+++ |..||...... . +.+.+..+..
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~----~----~~~~~~~~~~--- 226 (266)
T cd05064 158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ----D----VIKAVEDGFR--- 226 (266)
T ss_pred cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH----H----HHHHHHCCCC---
Confidence 2211111112335678999999998999999999999999999875 99998543111 1 1222222211
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
+. .+..+...+.+++.+||+.+|++||++++|.+.|+++
T Consensus 227 --~~----~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 227 --LP----APRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred --CC----CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 11 1222445688899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=318.59 Aligned_cols=248 Identities=27% Similarity=0.389 Sum_probs=208.3
Q ss_pred CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccC
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
|.+.+++|+|+||+||+|.++ .|+.+|+|++.- ..+..++.+|+.+|++++.|+||++||.|......|+|||||..
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 445778999999999999865 699999999864 34567889999999999999999999999999999999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
|+..|.++.+. .++.+.++..++...++||+||| ...-+|||||+.|||++-+|.+||+|||+|..+.. .-..
T Consensus 113 GSiSDI~R~R~---K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD-TMAK 185 (502)
T KOG0574|consen 113 GSISDIMRARR---KPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD-TMAK 185 (502)
T ss_pred CcHHHHHHHhc---CCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhh-hHHh
Confidence 99999999876 57999999999999999999999 67789999999999999999999999999987653 2233
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (959)
.....||+.|||||++..-.|+.++||||+|++..||..|++||....+ ++...... -.|+..-.
T Consensus 186 RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP--------------MRAIFMIP-T~PPPTF~ 250 (502)
T KOG0574|consen 186 RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP--------------MRAIFMIP-TKPPPTFK 250 (502)
T ss_pred hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc--------------cceeEecc-CCCCCCCC
Confidence 4556899999999999999999999999999999999999999854221 11111100 01111112
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 920 DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+..+...+-+++++|+-++|++|-||.+++++
T Consensus 251 KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 251 KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 356677889999999999999999999999875
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=339.85 Aligned_cols=264 Identities=25% Similarity=0.413 Sum_probs=202.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCC-----------------CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceecc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPD-----------------GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPL 740 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~ 740 (959)
++|++.++||+|+||.||+|.+.+ +..||+|.+.... .....++.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 568889999999999999997532 3369999987543 3345678899999999999999999
Q ss_pred ccceecCCceEEEEEeccCCCHHHHHhhhcC---------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 002155 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTG---------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIH 805 (959)
Q Consensus 741 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 805 (959)
++++...+..++||||+++|+|.+++..... ....+++.+++.++.|++.|++||| +.||+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence 9999999999999999999999999865321 1134678899999999999999999 889999
Q ss_pred CCCCCCCEEECCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh--CCCC
Q 002155 806 RDIKASNILLNEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT--GKEP 882 (959)
Q Consensus 806 ~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt--g~~p 882 (959)
|||||+||+++.++.+||+|||+++........ ......++..|+|||++.++.++.++||||||+++|||++ +..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999765432221 1222345789999999888889999999999999999987 4566
Q ss_pred CCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 883 TGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
|.... .......+............. ..+..+...+.+++.+||+.||++|||+.+|.+.|++
T Consensus 242 ~~~~~----~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 242 YGELT----DEQVIENAGEFFRDQGRQVYL------FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCcCC----HHHHHHHHHHHhhhccccccc------cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 65321 122222222222211110000 0111233568899999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=336.73 Aligned_cols=251 Identities=26% Similarity=0.343 Sum_probs=200.4
Q ss_pred CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
|+..+.||+|+||.||+|.+. +|+.||+|.+.... ......+.+|+.++++++|++++++++++.+++..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 677889999999999999864 78999999886432 22234577899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++|+|.+++..... ..+++..+..++.|++.|++||| +.||+||||||+||++++++.++|+|||++......
T Consensus 82 ~~~g~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~- 155 (285)
T cd05631 82 MNGGDLKFHIYNMGN--PGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG- 155 (285)
T ss_pred cCCCcHHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-
Confidence 999999988865432 35788999999999999999999 899999999999999999999999999999765322
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||....... ....+........
T Consensus 156 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~--------- 221 (285)
T cd05631 156 -ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV----KREEVDRRVKEDQ--------- 221 (285)
T ss_pred -CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch----hHHHHHHHhhccc---------
Confidence 12234568999999999999999999999999999999999999997532211 1111111111110
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPT-----MLHVLKF 952 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~ell~~ 952 (959)
..........+.+++.+||+.||++||+ +++++++
T Consensus 222 -~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 222 -EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred -ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 0111223456788999999999999997 8888874
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=335.04 Aligned_cols=267 Identities=23% Similarity=0.250 Sum_probs=201.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
++|++.+.||+|+||.||+|+++ +++.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46889999999999999999976 57899999986532 2334567889999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|++++.+..+.+.. ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 81 YVEKNMLELLEEMP----NGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred cCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 99987776554332 24788899999999999999999 899999999999999999999999999999876433
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCch--------HHHHHHHhhcCc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNL--------VGWVFQKMKKGQ 907 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~--------~~~~~~~~~~~~ 907 (959)
.........|++.|+|||++.+..++.++||||+||++|||++|++||...........+ ..+.........
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07848 154 SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPR 233 (287)
T ss_pred ccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccch
Confidence 222233456899999999998888999999999999999999999998653211000000 000000000000
Q ss_pred cccccCccccCC------CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 AADVLDPTVLTA------DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......+..... ........+.+++.+|++.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000100000 011234568899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=348.57 Aligned_cols=260 Identities=29% Similarity=0.465 Sum_probs=203.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc------CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL------PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 749 (959)
.++|++.+.||+|+||.||+|++ .++..||||+++... ....+.+.+|+++++.+ +||||++++++|..++.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 35688899999999999999963 235689999986433 33445688999999999 89999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCC---------------------------------------------------------
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGS--------------------------------------------------------- 772 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~--------------------------------------------------------- 772 (959)
.++||||+++|+|.++++.....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 99999999999999999753210
Q ss_pred --------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 773 --------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 773 --------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
...+++..+..++.||++|++||| +.|++||||||+||+++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 124788899999999999999999 899999999999999999999999999999765432221
Q ss_pred c-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 839 V-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 839 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
. .....++..|+|||++.+..++.++|||||||++|||++ |..||.....+ ... ...+..+... ..+
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~---~~~----~~~~~~~~~~--~~~-- 339 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD---SKF----YKMIKEGYRM--LSP-- 339 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch---HHH----HHHHHhCccC--CCC--
Confidence 1 112334668999999999999999999999999999998 88887543211 111 1222221110 011
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
......+.+++.+||+.||++||++.|+++.|++.
T Consensus 340 -----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 340 -----ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred -----CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 11234678999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=321.21 Aligned_cols=261 Identities=28% Similarity=0.449 Sum_probs=196.5
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhc--CCCCceeccccceecCC----ceEEEEEec
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGK--VKHQNLVPLLGYCSFDE----EKLLVYEYM 757 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~----~~~lv~e~~ 757 (959)
.++||+|+||.||+|.+. ++.||||++... +.+.|..|-.+++. ++|+||++++++-...+ +.++|+||.
T Consensus 215 ~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh 290 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFH 290 (534)
T ss_pred HHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeec
Confidence 567999999999999984 699999999743 34567777777665 58999999999876555 789999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC------CCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF------TPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+.|+|.+|+.... ++|....+|+..+++||+|||+.. +++|+|||||++|||+.+|+.+.|+|||+|..
T Consensus 291 ~kGsL~dyL~~nt-----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~ 365 (534)
T KOG3653|consen 291 PKGSLCDYLKANT-----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR 365 (534)
T ss_pred cCCcHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence 9999999999864 899999999999999999999543 56799999999999999999999999999988
Q ss_pred cccccccc-cccccccccccCCCcCCCCCC------CCcCcchhHHHHHHHHHhCCCCCCC--------CCcc-ccCCch
Q 002155 832 ISACETHV-STDIAGTFGYIPPEYGQSGRS------TTRGDVYSFGVILLELVTGKEPTGP--------EFKD-IEGGNL 895 (959)
Q Consensus 832 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~------~~~~DvwslG~il~elltg~~p~~~--------~~~~-~~~~~~ 895 (959)
+....... ....+||.+|||||++.+.-. -.+.||||+|.++||++++...+++ .+.. ...-..
T Consensus 366 ~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt 445 (534)
T KOG3653|consen 366 LEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPT 445 (534)
T ss_pred ecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCC
Confidence 76433222 234689999999999776432 2368999999999999997655432 1110 011111
Q ss_pred HHHHHHHhhcCccccccCccccCC-CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 896 VGWVFQKMKKGQAADVLDPTVLTA-DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+.++.-+. .+..+|.+... .....+..+.+.+..||+.||+.|.|+.=+-+.+.++.
T Consensus 446 ~e~mq~~VV----~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 446 LEEMQELVV----RKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred HHHHHHHHH----hhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 112222221 12222322211 11245567788999999999999999998888887763
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=344.50 Aligned_cols=253 Identities=24% Similarity=0.330 Sum_probs=203.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|++. +++.||+|++.... ......+..|+++++.++||||+++++++..++..|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999976 58899999987542 223456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG----VLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 9999999999997643 5788999999999999999999 89999999999999999999999999999976532
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
......||+.|+|||++.+..++.++||||+||++|||++|..||...... .. ...+.... .....
T Consensus 154 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~----~~----~~~i~~~~--~~~~~ 219 (333)
T cd05600 154 ----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN----ET----WENLKYWK--ETLQR 219 (333)
T ss_pred ----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH----HH----HHHHHhcc--ccccC
Confidence 223457899999999999889999999999999999999999998653211 11 11111110 00000
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.............+.+++.+|+..+|++||++++++++
T Consensus 220 ~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 220 PVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 01111112344567889999999999999999999875
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=330.27 Aligned_cols=252 Identities=27% Similarity=0.450 Sum_probs=203.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
++|++.+.||+|+||.||+|+++++..+|+|.+.... ...+++.+|+.++++++||||+++++++..++..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 4688889999999999999999888899999886433 234578889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+|+|.++++... ..+++..+..++.|++.|++||| +.|++||||||+||++++++.+|++|||.++........
T Consensus 83 ~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05114 83 NGCLLNYLRQRQ---GKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT 156 (256)
T ss_pred CCcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCcee
Confidence 999999997643 24788999999999999999999 889999999999999999999999999999765432222
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......++..|+|||.+.+..++.++||||||+++||+++ |+.||..... ... ...+..+.. ...+.
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~----~~~----~~~i~~~~~--~~~~~-- 224 (256)
T cd05114 157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN----YEV----VEMISRGFR--LYRPK-- 224 (256)
T ss_pred ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH----HHH----HHHHHCCCC--CCCCC--
Confidence 2222345668999999988889999999999999999999 8899854311 111 122222111 11111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 954 (959)
.....+.+++.+||+.+|++||+++++++.|.
T Consensus 225 -----~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 225 -----LASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred -----CCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 12346789999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=341.79 Aligned_cols=252 Identities=27% Similarity=0.425 Sum_probs=207.1
Q ss_pred CCCCeeccCCCeEEEEEEcC-CC----CEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 682 CKTNIIGDGGFGTVYKAALP-DG----KTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 682 ~~~~~lg~G~~g~V~~~~~~-~~----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
+..++||+|+||+||+|.|- +| -+||+|++.... .+...++.+|+..|.+++|||+++++|+|.... ..+|++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 34789999999999999863 34 368999886543 444677899999999999999999999998765 889999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|++.|+|.+|++..+ ..+..+..+.|..|||+|+.||| .+++|||||.++|||+....+||++|||+++....+
T Consensus 778 ~mP~G~LlDyvr~hr---~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHR---DNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred hcccchHHHHHHHhh---ccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 999999999999866 45777899999999999999999 899999999999999999999999999999988766
Q ss_pred ccccccccc-ccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 836 ETHVSTDIA-GTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 836 ~~~~~~~~~-gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
+........ -.+.|||-|.+....|+.++|||||||++||++| |..|++.... +.+.+.++.+..
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~--------~eI~dlle~geR----- 918 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA--------EEIPDLLEKGER----- 918 (1177)
T ss_pred cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH--------HHhhHHHhcccc-----
Confidence 555544332 3558999999999999999999999999999999 9999765321 223333333322
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
-+.++-+...+..++.+||..|++.||+++++...+.++-
T Consensus 919 ----LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 919 ----LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred ----CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence 2223344556777888899999999999999999998874
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=347.14 Aligned_cols=261 Identities=28% Similarity=0.451 Sum_probs=203.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 749 (959)
.++|++.+.||+|+||.||+|++. ++..||+|++.... ......+.+|+++++.+ +||||++++++|...+.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 357888999999999999998742 34579999987543 33345688999999999 89999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcC----------------------------------------------------------
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTG---------------------------------------------------------- 771 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~---------------------------------------------------------- 771 (959)
.++||||+++|+|.++++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 9999999999999999865321
Q ss_pred --------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc-cccc
Q 002155 772 --------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH-VSTD 842 (959)
Q Consensus 772 --------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~ 842 (959)
...++++.++++++.||++|++||| +.||+||||||+||++++++.+||+|||+++........ ....
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 1124788899999999999999999 899999999999999999999999999999765332211 1112
Q ss_pred ccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCC
Q 002155 843 IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADS 921 (959)
Q Consensus 843 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (959)
..++..|+|||++.+..++.++|||||||++|||++ |+.||...... .. .......+.. ...+.
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~---~~----~~~~~~~~~~--~~~~~------ 338 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN---SK----FYKMVKRGYQ--MSRPD------ 338 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc---HH----HHHHHHcccC--ccCCC------
Confidence 234568999999988899999999999999999997 99998643221 01 1111211110 00111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 922 KPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 922 ~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.....+.+++.+||+.||++||++.++++.|+++.
T Consensus 339 -~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 339 -FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred -CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 12346888999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=333.88 Aligned_cols=255 Identities=27% Similarity=0.440 Sum_probs=211.8
Q ss_pred CCCCCCeeccCCCeEEEEEEcCC-CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 680 NFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
+....++||-|.||.||.|.|+. .-.||||.++.+ .-..++|.+|+.+|+.++|||+|+++|+|..+..+|||+|||.
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~ 346 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMC 346 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEeccc
Confidence 34567889999999999999974 567999999754 4457889999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
.|+|.+|++.... ..++.-..+.+|.||+.|++||. .+++||||+.++|+|+.++..||++|||+++.+..+...
T Consensus 347 yGNLLdYLRecnr--~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT 421 (1157)
T KOG4278|consen 347 YGNLLDYLRECNR--SEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT 421 (1157)
T ss_pred CccHHHHHHHhch--hhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCcee
Confidence 9999999998653 34566677899999999999999 899999999999999999999999999999988654433
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......-...|.|||.+....++.|+|||+|||++||+.| |..||... + ...|.+-+..+..++
T Consensus 422 AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi----d----lSqVY~LLEkgyRM~------- 486 (1157)
T KOG4278|consen 422 AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI----D----LSQVYGLLEKGYRMD------- 486 (1157)
T ss_pred cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc----c----HHHHHHHHhcccccc-------
Confidence 3333344678999999999999999999999999999999 77776431 1 223444444443322
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+..|..+++++|++||+++|.+||+++|+-+.++.+.
T Consensus 487 --~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 487 --GPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred --CCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 23345568999999999999999999999999998875
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=335.99 Aligned_cols=245 Identities=22% Similarity=0.299 Sum_probs=200.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46888999999999999999876 68999999986432 223456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.++++... .+++..+..++.|++.|++||| +.|++||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 81 EYVPGGELFSYLRNSG----RFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 9999999999997654 5788899999999999999999 89999999999999999999999999999976532
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. .....|++.|+|||++.+..++.++||||+||++|||++|+.||..... ..+.+.+......
T Consensus 154 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~--------~~~~~~i~~~~~~----- 216 (291)
T cd05612 154 R----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP--------FGIYEKILAGKLE----- 216 (291)
T ss_pred C----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCcC-----
Confidence 1 1234689999999999988899999999999999999999999865321 1112222221110
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPT-----MLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~ell~~ 952 (959)
.+......+.+++.+||+.||.+||+ +++++++
T Consensus 217 -----~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 217 -----FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred -----CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 01112345778999999999999995 8888865
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=321.54 Aligned_cols=259 Identities=27% Similarity=0.341 Sum_probs=197.5
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCC-----ceEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE-----EKLLV 753 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~lv 753 (959)
.|+..+++|.|+||.||+|... +++.||||++..+... -.+|+++|+.++|||||++..+|.... ...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 4556789999999999999865 5789999998654432 136999999999999999988775332 23589
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC-CcEEEccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE-FEAKVADFGLARLI 832 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~~~ 832 (959)
|||++. +|.++++........++.-.+.-+..|+.+|++||| +.||+||||||.|+|+|.+ |.+||||||.|+..
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 999977 999999875444456777888899999999999999 8999999999999999987 99999999999988
Q ss_pred ccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc--
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA-- 909 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 909 (959)
...+.. ..+..|..|+|||.+.+. .|+.+.||||.||++.||+-|++-|.+... .+....+.+.+......
T Consensus 177 ~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~----~dQL~eIik~lG~Pt~e~I 250 (364)
T KOG0658|consen 177 VKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS----VDQLVEIIKVLGTPTREDI 250 (364)
T ss_pred ccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH----HHHHHHHHHHhCCCCHHHH
Confidence 654443 345678899999977665 689999999999999999999999865322 22222222222221111
Q ss_pred --------cccCccccCC-----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 910 --------DVLDPTVLTA-----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 910 --------~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+...|.+... .........++++.+++..+|.+|.++.|++++
T Consensus 251 ~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 251 KSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred hhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 1111222111 223445578899999999999999999999864
|
|
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=325.93 Aligned_cols=262 Identities=24% Similarity=0.388 Sum_probs=211.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.++||+|+||.||+|+.. +++.||||.+... .......+.+|+++++.++|||++++++++...+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57889999999999999999865 6899999987532 2333456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.........+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999999998754433345788999999999999999999 89999999999999999999999999999876543
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
... ......+++.|+|||...+..++.++||||+|+++|||++|+.||...... ...+. ..+.... .+
T Consensus 159 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~-----~~~~~-~~~~~~~-----~~ 226 (267)
T cd08228 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-----LFSLC-QKIEQCD-----YP 226 (267)
T ss_pred hhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc-----HHHHH-HHHhcCC-----CC
Confidence 221 122346788999999998888999999999999999999999998543221 11111 1222111 11
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
. .........+.+++.+||+.+|++||+++++++.++++++
T Consensus 227 ~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~~ 267 (267)
T cd08228 227 P---LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMHV 267 (267)
T ss_pred C---CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhcC
Confidence 1 1122344568899999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-37 Score=337.85 Aligned_cols=199 Identities=29% Similarity=0.434 Sum_probs=174.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|++. ++..||+|.+.... ......+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 367899999999999999999876 68889999887542 3345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++|+|.+++.... .+++..+..++.|++.|++|||+ ..+|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 84 HMDGGSLDQVLKEAK----RIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred cCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 999999999997643 47889999999999999999993 246999999999999999999999999998765321
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCC
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGP 885 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~ 885 (959)
......|++.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 158 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred ---ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 22345689999999999988999999999999999999999999854
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-37 Score=328.26 Aligned_cols=256 Identities=29% Similarity=0.445 Sum_probs=206.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.+.||+|+||.||+|.+.+++.||+|.++... ...+++.+|++++++++||||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 45688899999999999999998778899999987543 23466889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++.... ...+++..+..++.|++.|+.||| +.|++||||||+||++++++.++|+|||+++.......
T Consensus 84 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05068 84 KYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY 158 (261)
T ss_pred cCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence 9999999997654 245789999999999999999999 88999999999999999999999999999987653221
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
........+..|+|||+..+..++.++||||||+++|||++ |+.||..... ......+..... .
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~-----~-- 223 (261)
T cd05068 159 EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN--------AEVLQQVDQGYR-----M-- 223 (261)
T ss_pred cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCC-----C--
Confidence 11112223458999999998899999999999999999999 8988854211 111222222111 0
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
.........+.+++.+||+.+|++||++.++++.|+++
T Consensus 224 --~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 224 --PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred --CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 01112345688899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=339.31 Aligned_cols=242 Identities=21% Similarity=0.310 Sum_probs=195.8
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNG 760 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 760 (959)
++||+|+||.||+|+.+ +|+.||+|++.... ......+.+|+.++++++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999865 68999999987542 233455778999999999999999999999999999999999999
Q ss_pred CHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccc
Q 002155 761 SLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS 840 (959)
Q Consensus 761 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 840 (959)
+|.+++.... .+++.++..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++..... ....
T Consensus 81 ~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~-~~~~ 152 (323)
T cd05571 81 ELFFHLSRER----VFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD-GATM 152 (323)
T ss_pred cHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-CCcc
Confidence 9999987643 5788999999999999999999 899999999999999999999999999998753221 1122
Q ss_pred ccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCC
Q 002155 841 TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTAD 920 (959)
Q Consensus 841 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (959)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+..... . .
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--------~~~~~~~~~~~------~----~ 214 (323)
T cd05571 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEEI------R----F 214 (323)
T ss_pred cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--------HHHHHHHcCCC------C----C
Confidence 3456899999999999999999999999999999999999998642111 11112211110 0 0
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 921 SKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
+......+.+++.+||+.||++|| ++.+++++
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 215 PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 112344678899999999999999 79998764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=328.73 Aligned_cols=256 Identities=28% Similarity=0.441 Sum_probs=206.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.++||+|+||.||+|...++..||+|.+..... ..+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 357888999999999999999988888999998865332 3567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.++++.... ..+++.++..++.|+++|++||| +.+++||||||+||+++.++.++|+|||.+........
T Consensus 84 ~~~~L~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05072 84 AKGSLLDFLKSDEG--GKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 158 (261)
T ss_pred CCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence 99999999976432 35788899999999999999999 88999999999999999999999999999986543222
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......++..|+|||...+..++.++|||||||++|||++ |..||..... .. ....+..... ...
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~----~~----~~~~~~~~~~-----~~~ 225 (261)
T cd05072 159 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN----SD----VMSALQRGYR-----MPR 225 (261)
T ss_pred eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH----HH----HHHHHHcCCC-----CCC
Confidence 22223345678999999988889999999999999999998 8999854211 11 1222222111 111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
.......+.+++.+||..+|++||+++++.+.|+++
T Consensus 226 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 226 ----MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ----CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 112334678899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=339.96 Aligned_cols=245 Identities=24% Similarity=0.326 Sum_probs=200.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|+++ +++.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56888999999999999999876 58899999986532 233456789999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 98 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG----RFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred cCCCCChHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 9999999999997653 4788889999999999999999 89999999999999999999999999999976532
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. .....||+.|+|||++.+..++.++||||+||++|||++|..||..... ....+.+..+.. ..|
T Consensus 171 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--------~~~~~~i~~~~~---~~p 235 (329)
T PTZ00263 171 R----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP--------FRIYEKILAGRL---KFP 235 (329)
T ss_pred C----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH--------HHHHHHHhcCCc---CCC
Confidence 1 1235789999999999999999999999999999999999999864211 111222222211 001
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPT-----MLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~ell~~ 952 (959)
. .....+.+++.+||+.||++||+ +++++++
T Consensus 236 ~-------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 236 N-------WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred C-------CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1 12235778999999999999997 6887754
|
|
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=329.53 Aligned_cols=257 Identities=31% Similarity=0.520 Sum_probs=210.6
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+..+|++.++||+|+||.||+|.+.+++.+|+|++.........++..|+.+++.++||||+++++++...+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 35678889999999999999999888999999999876665567789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|.++++...+ ..+++.+++.++.|++.|++||| +.|++||||||+||++++++.+||+|||.+.......
T Consensus 84 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~ 158 (261)
T cd05148 84 MEKGSLLAFLRSPEG--QVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV 158 (261)
T ss_pred cccCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence 999999999986432 35788999999999999999999 8999999999999999999999999999997654321
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
.......++..|+|||...+..++.++||||||+++|+|++ |+.||..... .+.. ..+.... .+.
T Consensus 159 -~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~----~~~~----~~~~~~~-----~~~ 224 (261)
T cd05148 159 -YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN----HEVY----DQITAGY-----RMP 224 (261)
T ss_pred -ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH----HHHH----HHHHhCC-----cCC
Confidence 11223345678999999988889999999999999999998 8889854321 1111 1121111 011
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
........+.+++.+||+.||++|||+.++++.|+.+
T Consensus 225 ----~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 225 ----CPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred ----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 1122334678999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=342.14 Aligned_cols=261 Identities=19% Similarity=0.240 Sum_probs=198.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|.+. +++.||+|+... ..+.+|++++++++||||+++++++..+...++|||+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 367999999999999999999875 688999997532 3467899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+. ++|..++.... .+++.++..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 165 ~~-~~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 165 YK-TDLYCYLAAKR----NIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred CC-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 95 68888886543 4788999999999999999999 8899999999999999999999999999997543222
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccC---CchHHHHHHHhhcCc------
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG---GNLVGWVFQKMKKGQ------ 907 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~------ 907 (959)
........||+.|+|||++.+..++.++||||+||++|||++|..||......... ......+........
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 22333457999999999999889999999999999999999999887532211000 000000100000000
Q ss_pred -------------cccccCccccCC--CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 -------------AADVLDPTVLTA--DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 -------------~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......+...+. ........+.+++.+|++.||++|||++|++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000000100100 112344578899999999999999999999864
|
|
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-37 Score=326.49 Aligned_cols=252 Identities=27% Similarity=0.435 Sum_probs=202.5
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
++|++.+.||+|+||.||.|++.++..+|+|.+..... ..+++.+|+.++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 45778899999999999999987777899998875432 34678899999999999999999999998889999999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+|+|.++++... ..+++.+++.++.|++.|++||| +.|++|+||||+||+++.++.+||+|||.++........
T Consensus 83 ~~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05113 83 NGCLLNYLREHG---KRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT 156 (256)
T ss_pred CCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCcee
Confidence 999999997643 25789999999999999999999 899999999999999999999999999998765432222
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......++..|+|||...+..++.++||||||+++|||++ |..||...... . +...+...... ..+
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~----~----~~~~~~~~~~~--~~~--- 223 (256)
T cd05113 157 SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS----E----TVEKVSQGLRL--YRP--- 223 (256)
T ss_pred ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH----H----HHHHHhcCCCC--CCC---
Confidence 2222345678999999988889999999999999999999 89998542211 1 11222221111 001
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 954 (959)
......+.+++.+||+.||++||++.++++.++
T Consensus 224 ----~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 224 ----HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ----CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 112357889999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-37 Score=326.69 Aligned_cols=255 Identities=27% Similarity=0.427 Sum_probs=204.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.+|.+.+.||+|+||.||+|.++ +++.||+|.+... .....++.+|+++++.++|||++++++++..++..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 35777889999999999999875 5888999988653 333567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++.... ...+++..++.++.|+++|++||| +.|++||||||+||++++++.+||+|||.+........
T Consensus 85 ~~~~L~~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~ 159 (263)
T cd05052 85 TYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 159 (263)
T ss_pred CCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence 9999999997643 235788999999999999999999 89999999999999999999999999999976643222
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .. ....+.... .+.
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-------~~-~~~~~~~~~-----~~~- 225 (263)
T cd05052 160 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-------SQ-VYELLEKGY-----RME- 225 (263)
T ss_pred eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-------HH-HHHHHHCCC-----CCC-
Confidence 22222234568999999988899999999999999999998 8888754211 11 122222211 011
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
........+.+++.+||+.||++||++.++++.|+.+
T Consensus 226 ---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 226 ---RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ---CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 1112345688899999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-37 Score=330.45 Aligned_cols=258 Identities=28% Similarity=0.495 Sum_probs=206.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCC------CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPD------GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
++|++.+.||+|+||.||+|.... ...||+|.+.... ......+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 468889999999999999998642 2579999986543 333456889999999999999999999999889999
Q ss_pred EEEEeccCCCHHHHHhhhcCC------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC
Q 002155 752 LVYEYMVNGSLDLWLRNRTGS------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF 819 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 819 (959)
++|||+++++|.+++...... ...+++.+++.++.|++.|++||| +.|++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCCC
Confidence 999999999999999764321 135788899999999999999999 89999999999999999999
Q ss_pred cEEEcccccccccccccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHH
Q 002155 820 EAKVADFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVG 897 (959)
Q Consensus 820 ~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~ 897 (959)
.++|+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||...... +
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~----~--- 234 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ----E--- 234 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH----H---
Confidence 999999999976533221 12223356789999999888889999999999999999998 99998643211 1
Q ss_pred HHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 898 WVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
+...+..+... ..+..+...+.+++.+||+.||++||++.||+++|+++
T Consensus 235 -~~~~i~~~~~~---------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 235 -VIEMIRSRQLL---------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred -HHHHHHcCCcC---------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 22222222111 11233456788999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=332.54 Aligned_cols=246 Identities=26% Similarity=0.410 Sum_probs=203.6
Q ss_pred eeccCCCeEEEEEEcCC-CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCHHH
Q 002155 686 IIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDL 764 (959)
Q Consensus 686 ~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~ 764 (959)
++|+|.||+||-|++.+ ...+|||.+..........+.+|+..-++++|.|||+++|.+.+++..-+.||-++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 69999999999999875 56799999987666666778899999999999999999999999999999999999999999
Q ss_pred HHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC-CCCcEEEcccccccccccccccccccc
Q 002155 765 WLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN-EEFEAKVADFGLARLISACETHVSTDI 843 (959)
Q Consensus 765 ~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 843 (959)
+++...+.. .=.+.+.-.+.+||++||.||| +..|||||||.+|||++ ..|.+||+|||.+++...- ......+
T Consensus 662 LLrskWGPl-KDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi-nP~TETF 736 (1226)
T KOG4279|consen 662 LLRSKWGPL-KDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI-NPCTETF 736 (1226)
T ss_pred HHHhccCCC-ccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccC-Ccccccc
Confidence 999877532 1267788899999999999999 88999999999999995 6799999999999887643 3344568
Q ss_pred cccccccCCCcCCCC--CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCC
Q 002155 844 AGTFGYIPPEYGQSG--RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADS 921 (959)
Q Consensus 844 ~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (959)
.||..|||||++..+ .|+.++|||||||++.||.||++||....... + ...+-+ ... .-++-+
T Consensus 737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq------A---AMFkVG-myK-----vHP~iP 801 (1226)
T KOG4279|consen 737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ------A---AMFKVG-MYK-----VHPPIP 801 (1226)
T ss_pred ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh------H---hhhhhc-cee-----cCCCCc
Confidence 899999999998776 48999999999999999999999996432221 0 011111 111 122345
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 922 KPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 922 ~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
.....+...+|.+|+.+||.+||+|++++.
T Consensus 802 eelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 802 EELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 667778889999999999999999999874
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=333.06 Aligned_cols=262 Identities=24% Similarity=0.339 Sum_probs=198.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|++.++||+|+||.||+|+.+ +++.||+|+++... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56888999999999999999865 68899999986433 22334677899999999999999999999988899999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++ +|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||++++++.+||+|||+++......
T Consensus 85 ~~~-~l~~~l~~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 85 LDS-DLKQYLDNCG---NLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred CCc-CHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 975 8999887543 34688899999999999999999 8999999999999999999999999999997543221
Q ss_pred ccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc-------
Q 002155 837 THVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA------- 908 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------- 908 (959)
.......+++.|+|||++.+ ..++.++||||+||++|||++|++||...... +....+.........
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07871 158 -KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK----EELHLIFRLLGTPTEETWPGIT 232 (288)
T ss_pred -ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCChHHhhccc
Confidence 12233467899999998765 56899999999999999999999998653221 111111111110000
Q ss_pred -----ccccCccccCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 -----ADVLDPTVLTA----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 -----~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.....+..... ..........+++.+|++.||.+|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 233 SNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred cchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000100000 001123457799999999999999999999864
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=301.26 Aligned_cols=251 Identities=24% Similarity=0.375 Sum_probs=205.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-----h---hhHHHHHHHHHHHhcC-CCCceeccccceecCC
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-----T---QGHREFTAEMETLGKV-KHQNLVPLLGYCSFDE 748 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~---~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 748 (959)
+.|+..+.+|+|..++|.++..+ +|+.+|+|++.... + .-.+.-.+|+.+++++ .||+|+.+.++|..+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 46777889999999999998765 68899999875321 1 1123345799999998 6999999999999999
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..++|+|.|+.|.|.|++.+.- .+++....+|+.|+.+|++||| .+.|||||+||+|||++++.++||+|||+
T Consensus 97 F~FlVFdl~prGELFDyLts~V----tlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTSKV----TLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred hhhhhhhhcccchHHHHhhhhe----eecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccce
Confidence 9999999999999999998764 6889999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCC------CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQS------GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
++....+. .-...+|||+|.|||.+.. ..|+..+|+||+||++|-++.|.+||... ..+ .+.+.
T Consensus 170 a~~l~~Ge--kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR------kQm--lMLR~ 239 (411)
T KOG0599|consen 170 ACQLEPGE--KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR------KQM--LMLRM 239 (411)
T ss_pred eeccCCch--hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH------HHH--HHHHH
Confidence 99876533 3346799999999997643 35788999999999999999999998431 111 12233
Q ss_pred hhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+..+.. ...++...+......++|.+|++.||.+|.|++|++++
T Consensus 240 ImeGky------qF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 240 IMEGKY------QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred HHhccc------ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 333321 12344566777788999999999999999999999875
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=324.82 Aligned_cols=255 Identities=27% Similarity=0.463 Sum_probs=205.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
++|++.+.||+|+||.||+|.++ +...||||.+.... .....++.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 57889999999999999999874 24579999887543 33445688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.... ..+++..++.++.|++.|++||| +.+|+||||||+||++++++.++++|||++....
T Consensus 84 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 84 TEYMENGSLDKFLREND---GKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEcCCCCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 99999999999997654 25789999999999999999999 8999999999999999999999999999998764
Q ss_pred ccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 834 ACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 834 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
..... ......++..|+|||.+.+..++.++||||||+++||+++ |..||..... .. +...+......
T Consensus 158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~----~~----~~~~~~~~~~~-- 227 (266)
T cd05033 158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN----QD----VIKAVEDGYRL-- 227 (266)
T ss_pred ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH----HH----HHHHHHcCCCC--
Confidence 22211 1122334678999999988889999999999999999998 9999854211 11 12222211100
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
+ ...+....+.+++.+||+.+|++||+++|++++|+++
T Consensus 228 --~-----~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 --P-----PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred --C-----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1 0112345678999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=329.82 Aligned_cols=261 Identities=28% Similarity=0.470 Sum_probs=208.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
.++|.+.+.||+|+||.||++... ++..+|+|.+..........+.+|++++++++|||++++++++...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 357888999999999999999742 34568999987665555677899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcC---------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEE
Q 002155 752 LVYEYMVNGSLDLWLRNRTG---------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAK 822 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~---------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 822 (959)
+||||+++++|.++++.... ....+++.+++.++.|++.|++||| +.|++||||||+||++++++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEE
Confidence 99999999999999975431 2235899999999999999999999 89999999999999999999999
Q ss_pred Eccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHH
Q 002155 823 VADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 823 l~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 900 (959)
|+|||.++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||...... ...
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~--------~~~ 232 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--------EVI 232 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHH
Confidence 9999999765322211 1122335678999999988889999999999999999999 88887543211 112
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
..+..+..... .......+.+++.+||+.||.+|||+.++.+.|+++..
T Consensus 233 ~~i~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 233 ECITQGRVLQR---------PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred HHHHcCCcCCC---------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 22222211110 11123468899999999999999999999999998853
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-37 Score=312.44 Aligned_cols=265 Identities=26% Similarity=0.306 Sum_probs=202.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh--hHHHHHHHHHHHhcCCCCc-eeccccceecCC------
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ--GHREFTAEMETLGKVKHQN-LVPLLGYCSFDE------ 748 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~------ 748 (959)
..|+..++||+|+||+||+|+.+ +|+.||+|+++-.... ......+|+.+++.++|+| ||++++++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 34566778999999999999865 6899999998754332 3344678999999999999 999999998776
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..++||||++. +|..++.........++...+..++.|+++|++||| +++|+||||||.||+++++|.+||+|||+
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccch
Confidence 78899999965 999999886532234566889999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
|+..+-.... .+..++|.+|+|||++.+. .|+...||||+|||+.||+++++-|.+..+ .+....+.+.+....
T Consensus 167 Ara~~ip~~~-yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se----~~ql~~If~~lGtP~ 241 (323)
T KOG0594|consen 167 ARAFSIPMRT-YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE----IDQLFRIFRLLGTPN 241 (323)
T ss_pred HHHhcCCccc-ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH----HHHHHHHHHHcCCCC
Confidence 9876532222 3445789999999987776 689999999999999999999988866433 222223333333322
Q ss_pred cccccCcc--------ccCCC-CH-------HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 AADVLDPT--------VLTAD-SK-------PMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~~~~~~~~--------~~~~~-~~-------~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...+..-. ..... .. .......+++.+|++.+|.+|.|++.++.+
T Consensus 242 e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 242 EKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred ccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 22211100 00000 11 111367889999999999999999999986
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-37 Score=354.00 Aligned_cols=253 Identities=25% Similarity=0.335 Sum_probs=203.8
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-C-CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-D-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.|.+.+.||+|+||.||+|... + ++.||+|.+..........+..|+.+++.++||||+++++++..++..|+||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 3788899999999999999754 3 6788888876555555566788999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++|+|.++++.......++++.++..++.|++.||+|+| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988764433446888999999999999999999 89999999999999999999999999999987643221
Q ss_pred -cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 -HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .. +...+..+... +
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-------~~-~~~~~~~~~~~----~-- 290 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-------RE-IMQQVLYGKYD----P-- 290 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-------HH-HHHHHHhCCCC----C--
Confidence 122345689999999999999999999999999999999999999854211 11 11222111111 1
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+......+.+++.+||..||++||++++++.+
T Consensus 291 ---~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 291 ---FPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred ---CCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 011233467889999999999999999998753
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=333.10 Aligned_cols=199 Identities=29% Similarity=0.443 Sum_probs=173.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|.+. ++..+|+|.+... .......+.+|++++++++||||++++++|..++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 368999999999999999999876 6888999987654 23344668899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++|+|.+++.... .+++..+..++.|++.|++|||+ ..+++||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 84 HMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred cCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 999999999997643 47888999999999999999993 247999999999999999999999999998755321
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCC
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGP 885 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~ 885 (959)
......|+..|+|||.+.+..++.++||||+||++|||++|+.||..
T Consensus 158 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred ---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 12334688999999999988899999999999999999999999864
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=333.95 Aligned_cols=242 Identities=21% Similarity=0.310 Sum_probs=194.7
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNG 760 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 760 (959)
+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999865 68999999987542 233455678999999999999999999999999999999999999
Q ss_pred CHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccc
Q 002155 761 SLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS 840 (959)
Q Consensus 761 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 840 (959)
+|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++...... ....
T Consensus 81 ~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~-~~~~ 152 (323)
T cd05595 81 ELFFHLSRER----VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATM 152 (323)
T ss_pred cHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC-CCcc
Confidence 9998887643 5788999999999999999999 899999999999999999999999999998753221 1122
Q ss_pred ccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCC
Q 002155 841 TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTAD 920 (959)
Q Consensus 841 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (959)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+..... ..
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--------~~~~~~~~~~~---~~------- 214 (323)
T cd05595 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------RLFELILMEEI---RF------- 214 (323)
T ss_pred ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCCC---CC-------
Confidence 3356899999999999899999999999999999999999998643211 11111111110 00
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 921 SKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
+......+.+++.+||+.||++|| ++.+++++
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 215 PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 112334677899999999999998 88888764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=340.92 Aligned_cols=261 Identities=26% Similarity=0.412 Sum_probs=205.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCC-CCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~ 749 (959)
.++|.+.++||+|+||.||+|++. .+..||||++.... ....+.+.+|+++++++. ||||+++++++...+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 457888999999999999999853 13469999987543 333456889999999996 9999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcC----------------------------------------------------------
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTG---------------------------------------------------------- 771 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~---------------------------------------------------------- 771 (959)
.++||||+++|+|.+++.....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 9999999999999999875321
Q ss_pred ----------------------------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC
Q 002155 772 ----------------------------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE 817 (959)
Q Consensus 772 ----------------------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 817 (959)
....+++.++..++.|+++|++||| +.+++||||||+||+++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEeC
Confidence 0124678888999999999999999 899999999999999999
Q ss_pred CCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCch
Q 002155 818 EFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNL 895 (959)
Q Consensus 818 ~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~ 895 (959)
++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||.....+
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~------ 346 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD------ 346 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh------
Confidence 999999999999765432221 1122346778999999988889999999999999999997 88998643211
Q ss_pred HHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 896 VGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
......+..+.. +. ........+.+++.+||+.||++||++.++.+.|+++.
T Consensus 347 -~~~~~~~~~~~~-----~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 347 -STFYNKIKSGYR-----MA----KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred -HHHHHHHhcCCC-----CC----CCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 111222222110 10 11223457889999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=314.33 Aligned_cols=268 Identities=27% Similarity=0.358 Sum_probs=200.2
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccc--cchhhHHHHHHHHHHHhcCCCCceeccccceec-----CC
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQ--AKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF-----DE 748 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~ 748 (959)
....|...+.||+|+||.|+.|.++ +|+.||||++.. ......++..+|+++++.++|+||+.+.+++.. -.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 4455666789999999999999875 689999999873 344456677899999999999999999998865 25
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..|+|+|+| +.+|...++... .+....+..++.|+++|++|+| +.+|+|||+||+|++++.+..+||+|||+
T Consensus 100 DvYiV~elM-etDL~~iik~~~----~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQQ----DLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcCc----cccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEeccccc
Confidence 679999999 559999998754 4788899999999999999999 89999999999999999999999999999
Q ss_pred ccccccc-cccccccccccccccCCCcC-CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCcccc-------CCchHHHH
Q 002155 829 ARLISAC-ETHVSTDIAGTFGYIPPEYG-QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIE-------GGNLVGWV 899 (959)
Q Consensus 829 ~~~~~~~-~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~-------~~~~~~~~ 899 (959)
|+..... .....+.++.|.+|+|||++ ....|+.+.||||.|||+.||++|++-|.+...-.. -+.-....
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~ 251 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEED 251 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHH
Confidence 9987532 12334667889999999965 455799999999999999999999998854321000 00000111
Q ss_pred HHHhhcCccccccC--cccc----CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 900 FQKMKKGQAADVLD--PTVL----TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 900 ~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...+........+. |... ...-+......++++.+|+..||.+|+|++|++++
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11111111111100 0000 00011223346788899999999999999999875
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=333.56 Aligned_cols=242 Identities=21% Similarity=0.333 Sum_probs=195.3
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNG 760 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 760 (959)
++||+|+||.||+|+.. +++.||+|++.... ......+.+|+.+++.++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999865 68999999987532 233456778999999999999999999999999999999999999
Q ss_pred CHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccc
Q 002155 761 SLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS 840 (959)
Q Consensus 761 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 840 (959)
+|.+++.... .+++.++..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++..... ....
T Consensus 81 ~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~ 152 (328)
T cd05593 81 ELFFHLSRER----VFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD-AATM 152 (328)
T ss_pred CHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc-cccc
Confidence 9998886543 5789999999999999999999 899999999999999999999999999998753221 1222
Q ss_pred ccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCC
Q 002155 841 TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTAD 920 (959)
Q Consensus 841 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (959)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+.... . ..
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~-------~-~~~~~~~~~---~---~~---- 214 (328)
T cd05593 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-------K-LFELILMED---I---KF---- 214 (328)
T ss_pred ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH-------H-HHHHhccCC---c---cC----
Confidence 3456899999999999889999999999999999999999998642111 1 111111111 0 00
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 921 SKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
+......+.+++.+||+.||++|| ++.|++++
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 215 PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 112334677899999999999997 89998865
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=328.09 Aligned_cols=257 Identities=26% Similarity=0.491 Sum_probs=205.1
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCC------CCEEEEEEccccchh-hHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPD------GKTVAVKKLSQAKTQ-GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
.+|.+.+.||+|+||.||+|++.+ ++.||||.+...... ..+.+.+|+++++.++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 457788999999999999998643 478999998765433 4567899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcC----------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcE
Q 002155 752 LVYEYMVNGSLDLWLRNRTG----------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEA 821 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 821 (959)
+||||+++++|.++++.... ....+++.++..++.|++.|++|+| +.|++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCeE
Confidence 99999999999999976432 2235788899999999999999999 8899999999999999999999
Q ss_pred EEcccccccccccccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHH
Q 002155 822 KVADFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWV 899 (959)
Q Consensus 822 kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 899 (959)
+|+|||.++....... .......+++.|+|||++.+..++.++||||+||++|||++ |..||...... ..
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~----~~---- 233 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE----EV---- 233 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH----HH----
Confidence 9999999875432211 11122345778999999999999999999999999999998 99998543211 11
Q ss_pred HHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 900 FQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
...+..+.... ........+.+++.+||+.||++||++.|+++.|++
T Consensus 234 ~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 234 IECITQGRLLQ---------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHHHcCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 12222211110 111234568899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=337.51 Aligned_cols=252 Identities=25% Similarity=0.322 Sum_probs=198.8
Q ss_pred CCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEccccc----hhhHHHHHHHHHHHhcC-CCCceeccccceecCCce
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQAK----TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 750 (959)
+|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|+.+++.+ +||+|+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4788899999999999998753 57899999986432 22344577899999999 589999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++|+|.+++.... .+++.++..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD----NFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence 99999999999999987643 4788999999999999999999 8999999999999999999999999999997
Q ss_pred ccccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
..............||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .....+...+...
T Consensus 154 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----~~~~~~~~~~~~~--- 226 (332)
T cd05614 154 EFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER----NTQSEVSRRILKC--- 226 (332)
T ss_pred cccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC----CCHHHHHHHHhcC---
Confidence 6543333333345799999999998765 4788999999999999999999999643221 1112222222211
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
++... ......+.+++.+||+.||++|| ++++++++
T Consensus 227 ---~~~~~----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 227 ---DPPFP----SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred ---CCCCC----CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 11111 11234577889999999999999 77788764
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-37 Score=337.27 Aligned_cols=245 Identities=24% Similarity=0.328 Sum_probs=199.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCC--CCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPD--GKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
++|++.+.||+|+||.||+|.++. +..||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 468889999999999999998643 3689999986432 23345678899999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++|+|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 110 ~Ey~~~g~L~~~i~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK----RFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 99999999999997654 4788999999999999999999 8999999999999999999999999999997653
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.. .....||+.|+|||++.+..++.++||||+||++|||++|..||..... ......+...... .
T Consensus 183 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~--------~~~~~~i~~~~~~---~ 247 (340)
T PTZ00426 183 TR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP--------LLIYQKILEGIIY---F 247 (340)
T ss_pred CC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH--------HHHHHHHhcCCCC---C
Confidence 21 2345789999999999888899999999999999999999999964321 1122222222110 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
| ......+.+++.+|++.||++|+ ++++++++
T Consensus 248 p-------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 248 P-------KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred C-------CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 1 11223467889999999999995 89998765
|
|
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=326.45 Aligned_cols=266 Identities=28% Similarity=0.414 Sum_probs=200.6
Q ss_pred CCCCeeccCCCeEEEEEEc-----CCCCEEEEEEccccch-hhHHHHHHHHHHHhcCCCCceeccccceecC--CceEEE
Q 002155 682 CKTNIIGDGGFGTVYKAAL-----PDGKTVAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYCSFD--EEKLLV 753 (959)
Q Consensus 682 ~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv 753 (959)
++.+.||+|+||+||.+.. .+++.||+|.+..... .....+.+|++++++++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 7889999999999988653 3578899999875432 3456688999999999999999999987653 357899
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++... .+++.+++.++.|++.|++||| +.+++||||||+||++++++.++|+|||+++...
T Consensus 87 ~e~~~~~~l~~~~~~~-----~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 87 MEYVPLGSLRDYLPKH-----KLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred ecCCCCCCHHHHHHHc-----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence 9999999999999764 3889999999999999999999 8899999999999999999999999999997654
Q ss_pred cccccc--cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 834 ACETHV--STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 834 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
...... .....++..|+|||...+..++.++||||||+++|||++|..||......... .................
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEE--MIGPKQGQMTVVRLIEL 236 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhh--hhcccccccchhhhhhh
Confidence 322111 12224566799999998888999999999999999999999998643221110 00000000000000000
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+.....+........+.+++.+||+.||++||+++++++.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 237 LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 0011111112234457889999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=322.55 Aligned_cols=254 Identities=30% Similarity=0.481 Sum_probs=203.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
++|++.++||+|+||.||+|++.++..||+|++..... ..+.+.+|+++++.++||||+++++++. ++..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence 56889999999999999999987777899999875332 3456889999999999999999998774 456899999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+|+|.++++.... ..+++..+..++.|+++|++|+| +.+++||||||+||++++++.++|+|||.++........
T Consensus 84 ~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~ 158 (262)
T cd05071 84 KGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 158 (262)
T ss_pred CCcHHHHHhhccc--cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeeccccccc
Confidence 9999999976432 34788999999999999999999 899999999999999999999999999999765433222
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......++..|+|||...+..++.++||||+|+++||+++ |..||...... .......... .
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--------~~~~~~~~~~-----~---- 221 (262)
T cd05071 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERGY-----R---- 221 (262)
T ss_pred cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--------HHHHHHhcCC-----C----
Confidence 2223345678999999988889999999999999999999 77787543211 1111111111 0
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
.....+....+.+++.+|+++||++||+++++++.|++.
T Consensus 222 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 222 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 011233455788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-36 Score=322.21 Aligned_cols=261 Identities=24% Similarity=0.385 Sum_probs=209.8
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|... +++.||||.+.... .....++.+|+.+++.++||||+++++++..++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 46788899999999999999864 78999999876432 233457889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++++|.+++.........+++..++.++.|++.|++||| +.|++|+||||+||+++.++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999999764444456899999999999999999999 89999999999999999999999999999876543
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
... ......++..|+|||...+..++.++||||+|+++|||++|..||.....+ .... ...+... ..+
T Consensus 159 ~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~-~~~~~~~-----~~~ 226 (267)
T cd08229 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-----LYSL-CKKIEQC-----DYP 226 (267)
T ss_pred CCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch-----HHHH-hhhhhcC-----CCC
Confidence 221 122346888999999998888999999999999999999999998643211 1111 1111111 011
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.. ........+.+++.+||+.||++|||+.+|++.++++.
T Consensus 227 ~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 227 PL---PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred CC---CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 11 11234557889999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=342.55 Aligned_cols=257 Identities=25% Similarity=0.322 Sum_probs=206.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCC-CEEEEEEccccchhhHHHHHHHHHHHhcCC-CCceecccc-ceec------CC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDG-KTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLG-YCSF------DE 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~-~~~~------~~ 748 (959)
..++++.++|.+|||+.||.|.+..+ ..||+|++-..+....+...+|+++|+.++ |+|||.+++ .... ..
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 45677789999999999999998765 999999987777778888999999999997 999999999 3321 24
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
++++.||||+||.|-|++..+... .+.+.++++|+.|+++|+++||.. ...|||||||-+|||+..+++.||||||.
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~--~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQT--RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhc--cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccc
Confidence 678999999999999999876543 389999999999999999999954 56799999999999999999999999999
Q ss_pred cccccccc-cccc-------ccccccccccCCCc---CCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHH
Q 002155 829 ARLISACE-THVS-------TDIAGTFGYIPPEY---GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVG 897 (959)
Q Consensus 829 ~~~~~~~~-~~~~-------~~~~gt~~y~aPE~---~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~ 897 (959)
++-..... .... ....-|+.|+|||. ..+.+.+.|+||||+||++|-||....||+....-
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l-------- 264 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL-------- 264 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce--------
Confidence 86432211 1000 11246899999995 45678899999999999999999999999753111
Q ss_pred HHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 898 WVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+-.+ ...-+........|.+||..||++||++||++-+++..+-++.
T Consensus 265 ----aIlng--------~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~ 312 (738)
T KOG1989|consen 265 ----AILNG--------NYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELA 312 (738)
T ss_pred ----eEEec--------cccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHh
Confidence 01111 0011112456778999999999999999999999999998875
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=322.01 Aligned_cols=253 Identities=30% Similarity=0.487 Sum_probs=202.8
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
++|++.+.||+|+||.||+|.++++..||+|.+..... ..+.+.+|+.++++++||+++++++++. ....++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 46888999999999999999988888899999875433 3456889999999999999999999875 456899999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+++|.++++... ...+++.++..++.|++.|++||| +.+++||||||+||++++++.++|+|||.+.........
T Consensus 84 ~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05070 84 KGSLLDFLKDGE--GRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc
Confidence 999999997643 235789999999999999999999 889999999999999999999999999999765432222
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......++..|+|||...+..++.++||||||+++||+++ |..||.... .... ...+..... +
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~----~~~~----~~~~~~~~~-----~--- 222 (260)
T cd05070 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN----NREV----LEQVERGYR-----M--- 222 (260)
T ss_pred cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC----HHHH----HHHHHcCCC-----C---
Confidence 2222345668999999888889999999999999999999 888885421 1111 122221110 0
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
+...+....+.+++.+|++.+|++|||+.++.+.|++
T Consensus 223 -~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 -PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1112334568899999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=332.65 Aligned_cols=264 Identities=25% Similarity=0.332 Sum_probs=197.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch-hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|+.+ +++.||+|++..... .....+.+|+.+++.++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999976 688999999865432 223456789999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|++ +++.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||++++++.+||+|||++......
T Consensus 84 ~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 84 YVH-TDLCQYMDKHP---GGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred CCC-cCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 995 58888876543 34788899999999999999999 899999999999999999999999999998754321
Q ss_pred cccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc-----
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA----- 909 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 909 (959)
........+++.|+|||++.+ ..++.++||||+||++|||++|..||....+.. .....+..........
T Consensus 157 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 232 (303)
T cd07869 157 -SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ---DQLERIFLVLGTPNEDTWPGV 232 (303)
T ss_pred -CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH---HHHHHHHHHhCCCChhhccch
Confidence 122233567899999998765 457889999999999999999999996532110 0111111110000000
Q ss_pred ---cccCcccc----CCCCH------HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 910 ---DVLDPTVL----TADSK------PMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 910 ---~~~~~~~~----~~~~~------~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
....+... +.... .....+.+++.+|++.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 233 HSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred hhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 00000000 00000 112456789999999999999999999863
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=331.17 Aligned_cols=240 Identities=24% Similarity=0.299 Sum_probs=192.8
Q ss_pred eccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCH
Q 002155 687 IGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 687 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
||+|+||.||+|+.. +++.||+|++.... ......+.+|+.++++++||||+++++++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999876 57899999986532 33345677899999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccccc
Q 002155 763 DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD 842 (959)
Q Consensus 763 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 842 (959)
.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++...... .....
T Consensus 81 ~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 152 (312)
T cd05585 81 FHHLQREG----RFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNT 152 (312)
T ss_pred HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-Ccccc
Confidence 99997643 4788999999999999999999 8999999999999999999999999999987543221 22234
Q ss_pred ccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCH
Q 002155 843 IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSK 922 (959)
Q Consensus 843 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (959)
..||+.|+|||++.+..++.++||||+||++|||++|+.||.... ... ....+..... .. +.
T Consensus 153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~-------~~~-~~~~~~~~~~-------~~---~~ 214 (312)
T cd05585 153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-------VNE-MYRKILQEPL-------RF---PD 214 (312)
T ss_pred ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC-------HHH-HHHHHHcCCC-------CC---CC
Confidence 578999999999999999999999999999999999999986421 111 1122211110 01 11
Q ss_pred HHHHHHHHHHHHcccCCCCCCCC---HHHHHHH
Q 002155 923 PMMLKMLRIAGDCLSDNPAMRPT---MLHVLKF 952 (959)
Q Consensus 923 ~~~~~l~~li~~cl~~dP~~Rps---~~ell~~ 952 (959)
.....+.+++.+||+.||++||+ +.|++.+
T Consensus 215 ~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 215 GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred cCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 23346778999999999999985 5666543
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=322.42 Aligned_cols=251 Identities=29% Similarity=0.463 Sum_probs=200.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
.+|++.+.||+|+||.||+|.++++..+|+|.+..... ....+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 35778899999999999999988778899998864322 23467889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+++|.++++... ..+++..++.++.|++.|++||| +.|++||||||+||++++++.+||+|||.++........
T Consensus 83 ~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~ 156 (256)
T cd05059 83 NGCLLNYLRERK---GKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT 156 (256)
T ss_pred CCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceeccccccc
Confidence 999999997654 25789999999999999999999 899999999999999999999999999998765422211
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......++..|+|||...+..++.++||||||+++||+++ |..||...... .. ......... ...+
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~----~~~~~~~~~--~~~~--- 223 (256)
T cd05059 157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS----EV----VESVSAGYR--LYRP--- 223 (256)
T ss_pred ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH----HH----HHHHHcCCc--CCCC---
Confidence 1112234458999999988899999999999999999999 78888542111 11 112221110 0111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 953 (959)
......+.+++.+||..+|++||++.|+++.|
T Consensus 224 ----~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 224 ----KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 12344688999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=333.53 Aligned_cols=262 Identities=31% Similarity=0.449 Sum_probs=203.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceec-CC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSF-DE 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~-~~ 748 (959)
.++|++.++||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++++ +||||++++++|.. +.
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 357889999999999999999642 35789999987543 23345677899999999 89999999998764 45
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCC--------------------------------------------------------
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGS-------------------------------------------------------- 772 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~-------------------------------------------------------- 772 (959)
..++||||+++++|.+++......
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 678999999999999998653211
Q ss_pred -ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc-ccccccccccc
Q 002155 773 -LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV-STDIAGTFGYI 850 (959)
Q Consensus 773 -~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y~ 850 (959)
...+++..+..++.||+.|++||| +.||+||||||+||+++.++.++|+|||++.......... .....++..|+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 125789999999999999999999 8999999999999999999999999999998754322222 12234567899
Q ss_pred CCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHH
Q 002155 851 PPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKML 929 (959)
Q Consensus 851 aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 929 (959)
|||++.+..++.++||||+||++|||++ |..||.....+ ......+...... . .+......+.
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~-----~----~~~~~~~~~~ 306 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID-------EEFCRRLKEGTRM-----R----APEYATPEIY 306 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc-------HHHHHHHhccCCC-----C----CCccCCHHHH
Confidence 9999999999999999999999999998 99998542211 0111222211110 0 0112334688
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 930 RIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 930 ~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
+++.+||+.+|++||++.|++++|+++..
T Consensus 307 ~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 307 SIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-36 Score=320.33 Aligned_cols=261 Identities=25% Similarity=0.409 Sum_probs=211.1
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|... +|+.||+|.++.. .....+.+.+|++++++++|++++++++++..++..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999876 7899999988632 2233567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++++|.+++.........+++.++..++.+++.|+.||| +.|++||||+|+||+++.++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998765444456889999999999999999999 89999999999999999999999999999876543
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
... ......++..|+|||...+..++.++||||+|+++|+|++|+.||...... .... .+....+.. +
T Consensus 159 ~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~-~~~~~~~~~-----~ 226 (267)
T cd08224 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-----LYSL-CKKIEKCDY-----P 226 (267)
T ss_pred CCc-ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc-----HHHH-HhhhhcCCC-----C
Confidence 221 122346788999999988888999999999999999999999998543211 1111 111111110 1
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. .........+.+++.+||+.+|++||++.+|++.+++++
T Consensus 227 ~---~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 227 P---LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred C---CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 1 111234456788999999999999999999999999886
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=325.58 Aligned_cols=248 Identities=24% Similarity=0.319 Sum_probs=196.3
Q ss_pred eccCCCeEEEEEEcC-CCCEEEEEEccccch---hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCH
Q 002155 687 IGDGGFGTVYKAALP-DGKTVAVKKLSQAKT---QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 687 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
||+|+||+||+|.++ +++.||+|++..... ...+.+..|+++++.++||+|+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999865 688999999865322 2234567899999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccccc
Q 002155 763 DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD 842 (959)
Q Consensus 763 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 842 (959)
.+++.........+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||.+........ ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-cccc
Confidence 9888654433456899999999999999999999 89999999999999999999999999999976543222 2234
Q ss_pred ccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCH
Q 002155 843 IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSK 922 (959)
Q Consensus 843 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (959)
..|++.|+|||++.+..++.++||||+||++|||++|+.||........ ...+....... +. ..+.
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~----~~~~~~~~~~~-------~~---~~~~ 222 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE----NKELKQRILND-------SV---TYPD 222 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh----HHHHHHhhccc-------CC---CCcc
Confidence 5689999999999999999999999999999999999999965322111 01111111111 00 1112
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 923 PMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 923 ~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
.....+.+++.+||+.||++|| ++++++++
T Consensus 223 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 223 KFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 2445678899999999999999 77888764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=342.65 Aligned_cols=252 Identities=22% Similarity=0.255 Sum_probs=195.1
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.|++.+.||+|+||+||+|+.. +++.||+|++.... ......+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788999999999999999865 68899999986532 2334568899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++|+|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++++||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~~~----~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 82 YIPGGDMMSLLIRME----VFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred cCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 999999999997643 4788899999999999999999 899999999999999999999999999997533100
Q ss_pred c----------------------------------------------ccccccccccccccCCCcCCCCCCCCcCcchhH
Q 002155 836 E----------------------------------------------THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSF 869 (959)
Q Consensus 836 ~----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvwsl 869 (959)
. ........||+.|+|||++.+..++.++||||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 0 000123469999999999988899999999999
Q ss_pred HHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHH--cccCCCCCCCCHH
Q 002155 870 GVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGD--CLSDNPAMRPTML 947 (959)
Q Consensus 870 G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dP~~Rps~~ 947 (959)
||++|||++|..||...... .............. .|. .......+.+++.+ |+..+|..||+++
T Consensus 235 G~il~elltG~~Pf~~~~~~-------~~~~~i~~~~~~~~--~~~-----~~~~s~~~~dli~~ll~~~~~~~~R~~~~ 300 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPT-------ETQLKVINWENTLH--IPP-----QVKLSPEAVDLITKLCCSAEERLGRNGAD 300 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHH-------HHHHHHHccccccC--CCC-----CCCCCHHHHHHHHHHccCcccccCCCCHH
Confidence 99999999999999653221 00111111000000 010 11122345566666 5667777799999
Q ss_pred HHHHH
Q 002155 948 HVLKF 952 (959)
Q Consensus 948 ell~~ 952 (959)
+++++
T Consensus 301 ~~l~h 305 (381)
T cd05626 301 DIKAH 305 (381)
T ss_pred HHhcC
Confidence 99875
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=337.46 Aligned_cols=254 Identities=24% Similarity=0.292 Sum_probs=200.7
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
..++|++.+.||+|+||.||+|+.+ +++.||+|++.... ......+.+|+.+++.++||||+++++++.++...++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3467899999999999999999875 68899999986432 2233457789999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++...
T Consensus 121 v~Ey~~gg~L~~~l~~~-----~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY-----DIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 99999999999998754 3677888899999999999999 899999999999999999999999999999765
Q ss_pred ccccccccccccccccccCCCcCCCC----CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSG----RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
............||+.|+|||++.+. .++.++||||+||++|||++|+.||..... .. ....+.....
T Consensus 193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-------~~-~~~~i~~~~~ 264 (370)
T cd05596 193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-------VG-TYSKIMDHKN 264 (370)
T ss_pred cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH-------HH-HHHHHHcCCC
Confidence 43222223345799999999987653 478999999999999999999999865321 11 1122211110
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAM--RPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~ell~~ 952 (959)
. ...| ........+.+++.+|++.+|++ ||+++|++++
T Consensus 265 ~-~~~~-----~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 265 S-LTFP-----DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred c-CCCC-----CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0 0001 11123456778999999999988 9999999865
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-36 Score=322.33 Aligned_cols=255 Identities=27% Similarity=0.350 Sum_probs=202.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|+.. +++.||+|++..........+.+|+.++++++||||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 457899999999999999999964 6889999998755444456678899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|.++++... .+++..+..++.|++.|++||| +.||+|||+||+||+++.++.++|+|||++.......
T Consensus 88 ~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 88 CGGGSLQDIYHVTG----PLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred CCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence 99999999987543 5788999999999999999999 8899999999999999999999999999998654221
Q ss_pred ccccccccccccccCCCcCC---CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 837 THVSTDIAGTFGYIPPEYGQ---SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.......++..|+|||.+. ...++.++||||+||++|||++|+.||......... . .+.. ....
T Consensus 161 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~-------~-~~~~----~~~~ 227 (267)
T cd06646 161 -AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-------F-LMSK----SNFQ 227 (267)
T ss_pred -cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-------e-eeec----CCCC
Confidence 1123346788999999874 345788999999999999999999998543211000 0 0000 0011
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 953 (959)
+.. ..........+.+++.+||+.+|++||+++++++++
T Consensus 228 ~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 228 PPK-LKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCC-CccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 111 111123445788999999999999999999998764
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=332.42 Aligned_cols=256 Identities=25% Similarity=0.414 Sum_probs=201.5
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCC----EEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGK----TVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.+|+..+.||+|+||.||+|++. ++. .||+|++.... ....+++.+|+.+++.++||||+++++++..+ ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46889999999999999999864 333 48999987543 33456788999999999999999999998764 5789
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
|+||+++|+|.++++... ..+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 86 v~e~~~~g~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 86 ITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred eeecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccccc
Confidence 999999999999998654 34788899999999999999999 899999999999999999999999999999876
Q ss_pred cccccccc-ccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 833 SACETHVS-TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 833 ~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
........ ....++..|+|||.+.+..++.++|||||||++||+++ |..||...... . +.........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~----~----~~~~~~~~~~-- 229 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----E----ISSILEKGER-- 229 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH----H----HHHHHhCCCC--
Confidence 53222211 12234668999999998999999999999999999998 99998542111 1 1111111110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
+...+ .+...+.+++.+||..||++||++.+++..+.++..
T Consensus 230 ---~~~~~----~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 230 ---LPQPP----ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred ---CCCCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 00011 123457889999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-37 Score=351.84 Aligned_cols=256 Identities=26% Similarity=0.364 Sum_probs=204.7
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCC-----
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE----- 748 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 748 (959)
..++|++.+.||+|+||.||+|+.. +|+.||||++... .......+.+|+.++..++|++++++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 4578999999999999999999864 6899999998643 2344556788999999999999999988765432
Q ss_pred ---ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcc
Q 002155 749 ---EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVAD 825 (959)
Q Consensus 749 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 825 (959)
..++||||+++|+|.++++........+++..+..++.|++.||.|+| +.+|+||||||+||+++.++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEEe
Confidence 367999999999999999876544557899999999999999999999 89999999999999999999999999
Q ss_pred ccccccccccc-ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh
Q 002155 826 FGLARLISACE-THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904 (959)
Q Consensus 826 fg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (959)
||+++.+.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ....+ ....
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-------~~~~~-~~~~ 258 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-------MEEVM-HKTL 258 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-------HHHHH-HHHh
Confidence 99997654321 122234578999999999999999999999999999999999999986421 11112 2222
Q ss_pred cCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+.. .+ .+......+.+++.+||+.||++||++.+++++
T Consensus 259 ~~~~----~~-----~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 259 AGRY----DP-----LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred cCCC----CC-----CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1111 11 111233468889999999999999999999864
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-37 Score=342.86 Aligned_cols=252 Identities=25% Similarity=0.341 Sum_probs=202.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+++++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46888999999999999999976 68999999987542 233456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++++|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 81 EYMPGGDLMNLLIRKD----VFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred cCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 9999999999998652 5788999999999999999999 89999999999999999999999999999976543
Q ss_pred cc----------------------------ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 002155 835 CE----------------------------THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 886 (959)
Q Consensus 835 ~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~ 886 (959)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 22 11223346899999999999999999999999999999999999998653
Q ss_pred CccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHH
Q 002155 887 FKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT-MLHVLKF 952 (959)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~ell~~ 952 (959)
... . ....+.... .....|. .......+.+++.+|+. ||++||+ +++++++
T Consensus 234 ~~~-------~-~~~~i~~~~-~~~~~p~-----~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 234 TLQ-------E-TYNKIINWK-ESLRFPP-----DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CHH-------H-HHHHHhccC-CcccCCC-----CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 211 1 111111100 0000111 11134567788999997 9999999 9999875
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=326.84 Aligned_cols=259 Identities=28% Similarity=0.494 Sum_probs=207.8
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.+|.+.+.||+|+||.||+|++. ++..+|+|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45778899999999999999742 345689999876665556678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc
Q 002155 753 VYEYMVNGSLDLWLRNRTG------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE 820 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 820 (959)
||||+++++|.++++.... ....+++..++.++.|++.|++||| ++|++||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCc
Confidence 9999999999999976432 1234789999999999999999999 899999999999999999999
Q ss_pred EEEcccccccccccccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHH
Q 002155 821 AKVADFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGW 898 (959)
Q Consensus 821 ~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 898 (959)
++|+|||++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||...... .
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~----~---- 233 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT----E---- 233 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----H----
Confidence 99999999976543221 11223346788999999988899999999999999999999 99998553221 1
Q ss_pred HHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 899 VFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
+.+.+..+.... ........+.+++.+||+.||++||++.++++.|+++.
T Consensus 234 ~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~ 283 (291)
T cd05094 234 VIECITQGRVLE---------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALG 283 (291)
T ss_pred HHHHHhCCCCCC---------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 112222221111 01123346889999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=335.23 Aligned_cols=253 Identities=23% Similarity=0.243 Sum_probs=200.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch---hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT---QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||+||+|+.+ +++.||+|+++.... .....+.+|+.+++.++||+|+++++++..++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46888999999999999999865 688999999875432 23456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 81 EYQPGGDLLSLLNRYE---DQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred CCCCCCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 9999999999998753 25888999999999999999999 89999999999999999999999999999987643
Q ss_pred ccccccccccccccccCCCcCC------CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQ------SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
..........||+.|+|||++. ...++.++||||+||++|||++|+.||..... .............
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-------~~~~~~i~~~~~~ 227 (330)
T cd05601 155 NKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS-------AKTYNNIMNFQRF 227 (330)
T ss_pred CCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH-------HHHHHHHHcCCCc
Confidence 3322223346899999999876 45678999999999999999999999864321 1111111111110
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... | ........+.+++.+|+. +|++||++++++++
T Consensus 228 ~~~--~-----~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 228 LKF--P-----EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred cCC--C-----CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 000 0 111233457788899998 99999999999864
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=335.48 Aligned_cols=248 Identities=29% Similarity=0.452 Sum_probs=192.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|+..++||+|+||.||+|++. +++.||||++.... ......+.+|+++++.++|+||+++++++..++..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 34666789999999999999865 68999999986433 33346688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++|+|.+.. ...+..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 154 ~~~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 154 MDGGSLEGTH--------IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred CCCCcccccc--------cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 9999985432 2456778899999999999999 8999999999999999999999999999997654221
Q ss_pred ccccccccccccccCCCcCCC-----CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQS-----GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.......||..|+|||++.. ...+.++|||||||++|||++|+.||..... .+....... +....
T Consensus 223 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~----~~~~~~~~~-~~~~~---- 292 (353)
T PLN00034 223 -DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ----GDWASLMCA-ICMSQ---- 292 (353)
T ss_pred -ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC----ccHHHHHHH-HhccC----
Confidence 12234578999999998743 2345689999999999999999999973211 111111111 11100
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+ .........+.+++.+||+.||++||++.|++++
T Consensus 293 -~~----~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 293 -PP----EAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred -CC----CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 1112234568899999999999999999999875
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=325.38 Aligned_cols=259 Identities=28% Similarity=0.446 Sum_probs=202.4
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
.+++|++.+.||+|+||.||+|.+. ++..||+|++.... .....++.+|+.+++.++||||+++++++..+..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4578999999999999999998753 35679999986432 2344568899999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCC------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEE
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGS------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 823 (959)
.++||||+++|+|.++++..... ....++..+..++.|++.|++||| +.|++||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEE
Confidence 99999999999999999764321 124578889999999999999999 889999999999999999999999
Q ss_pred cccccccccccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHH
Q 002155 824 ADFGLARLISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
+|||+++......... .....+++.|+|||++.+..++.++|||||||++|||++ |..||..... .. ...
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~----~~----~~~ 232 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN----EQ----VLR 232 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH----HH----HHH
Confidence 9999987553222111 112245678999999988889999999999999999999 6788754211 11 111
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
......... ........+.+++.+||+.||++||++.|+++.|++
T Consensus 233 ~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 233 FVMEGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHcCCcCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 111111110 011223467889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-36 Score=320.87 Aligned_cols=255 Identities=31% Similarity=0.474 Sum_probs=204.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.++||+|+||.||+|..++++.||+|.+..... ...++.+|+.++++++|||++++++++. .+..++||||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 357888999999999999999988899999999875433 3467889999999999999999998864 56789999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++....+ ..+++.++..++.|++.|++||| +.|++||||||+||++++++.++++|||.+........
T Consensus 83 ~~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05067 83 ENGSLVDFLKTPEG--IKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY 157 (260)
T ss_pred CCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence 99999999876432 35788999999999999999999 89999999999999999999999999999976542222
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......++..|+|||++.+..++.++||||||+++||+++ |+.||...... . ....+..... +.
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~----~~~~~~~~~~-----~~- 223 (260)
T cd05067 158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP----E----VIQNLERGYR-----MP- 223 (260)
T ss_pred ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH----H----HHHHHHcCCC-----CC-
Confidence 22223345678999999988889999999999999999999 99998543211 1 1122221111 01
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
........+.+++.+||+.+|++||+++++.+.|+++
T Consensus 224 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 224 ---RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred ---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence 1112234688999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=328.66 Aligned_cols=262 Identities=25% Similarity=0.333 Sum_probs=193.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC--CCCEEEEEEccccc--hhhHHHHHHHHHHHhcC---CCCceecccccee-----c
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP--DGKTVAVKKLSQAK--TQGHREFTAEMETLGKV---KHQNLVPLLGYCS-----F 746 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~-----~ 746 (959)
.+|++.+.||+|+||.||+|++. +++.||+|++.... ......+.+|+.+++.+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888999999999999999863 46789999886432 22233455677766655 6999999999875 2
Q ss_pred CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 747 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
....++||||++ ++|.+++..... ..+++.++..++.|++.||+||| +.||+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccc
Confidence 356899999996 589999876432 34788999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
|+++..... .......|++.|+|||.+.+..++.++||||+||++|||++|++||...... +....+.......
T Consensus 155 g~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~----~~~~~i~~~~~~~ 228 (290)
T cd07862 155 GLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV----DQLGKILDVIGLP 228 (290)
T ss_pred cceEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH----HHHHHHHHHhCCC
Confidence 999765432 2233456899999999998888999999999999999999999998754221 1111121111100
Q ss_pred cccc----------ccCccc---cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 QAAD----------VLDPTV---LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 ~~~~----------~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...+ .+.+.. ......+....+.+++.+|++.||++|||+.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 229 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred ChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 0000 000000 000011233456789999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-36 Score=335.64 Aligned_cols=254 Identities=23% Similarity=0.276 Sum_probs=198.4
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.+++.++||||+++++++..++..|+
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 4578999999999999999999876 57899999986422 2234457789999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++...
T Consensus 121 v~Ey~~gg~L~~~l~~~-----~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~ 192 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY-----DVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM 192 (370)
T ss_pred EEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceec
Confidence 99999999999999653 3678889999999999999999 899999999999999999999999999999876
Q ss_pred ccccccccccccccccccCCCcCCCCC----CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGR----STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
............||+.|+|||++.+.. ++.++||||+||++|||++|+.||..... .......+.....
T Consensus 193 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~-------~~~~~~i~~~~~~ 265 (370)
T cd05621 193 DETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL-------VGTYSKIMDHKNS 265 (370)
T ss_pred ccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCcc
Confidence 432222233457999999999876543 78899999999999999999999964321 1111111111110
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAM--RPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~ell~~ 952 (959)
... +........+.+++.+|+..+|.+ |+++.|++++
T Consensus 266 ~~~-------p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 266 LNF-------PEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred cCC-------CCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 010 111123345667888888765544 8899999876
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=337.67 Aligned_cols=252 Identities=21% Similarity=0.289 Sum_probs=198.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.+++.++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47889999999999999999875 68999999987532 233455778999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.++|+|||++.....
T Consensus 81 E~~~~g~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 81 EYLPGGDMMTLLMKKD----TFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred CCCCCcHHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 9999999999997643 4888999999999999999999 89999999999999999999999999999875422
Q ss_pred cccc-------------------------------------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHH
Q 002155 835 CETH-------------------------------------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELV 877 (959)
Q Consensus 835 ~~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell 877 (959)
.... .....+||+.|+|||++.+..++.++||||+||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 1100 011235899999999999889999999999999999999
Q ss_pred hCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC---HHHHHHH
Q 002155 878 TGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT---MLHVLKF 952 (959)
Q Consensus 878 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~~ell~~ 952 (959)
+|..||...... ........... ....|. .......+.+++.+|+. +|.+|++ ++|++++
T Consensus 234 ~G~~Pf~~~~~~-------~~~~~i~~~~~--~~~~~~-----~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 234 VGYPPFCSDNPQ-------ETYRKIINWKE--TLQFPD-----EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred cCCCCCCCCCHH-------HHHHHHHcCCC--ccCCCC-----CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 999998643211 11111111110 000010 11223456778888986 9999998 8888764
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-36 Score=330.53 Aligned_cols=250 Identities=21% Similarity=0.311 Sum_probs=195.4
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
+.||+|+||.||+|+.+ +++.||+|++.... ......+..|+.++.++ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999875 57899999987532 23344567888888776 799999999999999999999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
|+|..++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~~~~~~----~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~-~~~ 152 (329)
T cd05618 81 GDLMFHMQRQR----KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDT 152 (329)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC-CCc
Confidence 99998886543 5888999999999999999999 899999999999999999999999999998753221 112
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCcc-ccCCchHHHHHHHhhcCccccccCccccC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKD-IEGGNLVGWVFQKMKKGQAADVLDPTVLT 918 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (959)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ........++.+.+......
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~--------- 223 (329)
T cd05618 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--------- 223 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCC---------
Confidence 23457899999999999999999999999999999999999999532211 11122233333333322111
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHHH
Q 002155 919 ADSKPMMLKMLRIAGDCLSDNPAMRPTM------LHVLKF 952 (959)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rps~------~ell~~ 952 (959)
.+......+.+++.+||+.||++||++ .+++++
T Consensus 224 -~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 224 -IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred -CCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 011223457789999999999999984 666543
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-36 Score=324.99 Aligned_cols=257 Identities=27% Similarity=0.457 Sum_probs=202.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEc-----CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAAL-----PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
++|++.+.||+|+||.||+|.+ .++..||+|.+.... ......+.+|+.++++++||||+++++++..++..|+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4577889999999999999974 246789999987533 3334678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcC-------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC
Q 002155 753 VYEYMVNGSLDLWLRNRTG-------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF 819 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 819 (959)
||||+++++|.+++..... ....+++.++..++.|++.|++||| +.|++||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCCC
Confidence 9999999999999864321 1234788899999999999999999 88999999999999999999
Q ss_pred cEEEcccccccccccccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHH
Q 002155 820 EAKVADFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVG 897 (959)
Q Consensus 820 ~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~ 897 (959)
.+||+|||+++....... .......++..|+|||+..+..++.++||||||+++|||++ |..||..... .
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--------~ 233 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--------Q 233 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--------H
Confidence 999999999976532211 11223345678999999988889999999999999999999 8888854211 1
Q ss_pred HHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 898 WVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
.+.+.+....... ....+...+.+++.+||+.||++||++.++.++|+.
T Consensus 234 ~~~~~~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 234 EVIEMVRKRQLLP---------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHcCCcCC---------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1222222221110 111233467889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=325.86 Aligned_cols=252 Identities=25% Similarity=0.328 Sum_probs=211.9
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh---hHHHHHHHHHHHhcCC-CCceeccccceecCCceE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ---GHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 751 (959)
....|++.+.||+|.||.||+++.+ +|+.+|+|++.+.... +.+.+.+|+++|+++. |||||.++++|.+....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3457888899999999999999976 4999999999765432 3467889999999998 999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC----CcEEEcccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE----FEAKVADFG 827 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg 827 (959)
+|||++.||.|.+.+... .+++..+..++.|++.++.||| +.||||||+||+|+|+... +.+|++|||
T Consensus 113 lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred EEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 999999999999999876 2888999999999999999999 8999999999999999543 579999999
Q ss_pred cccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 828 LARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
++..... .......+||+.|+|||++...+|+.++||||+|+++|.|++|.+||....... ....+..+.
T Consensus 185 la~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~--------~~~~i~~~~ 254 (382)
T KOG0032|consen 185 LAKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFE--------IFLAILRGD 254 (382)
T ss_pred CceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhH--------HHHHHHcCC
Confidence 9988765 344566789999999999999999999999999999999999999997643221 112233322
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ...............+++..|+..||.+|+++.+++++
T Consensus 255 ~------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 255 F------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred C------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 2 22233344556677889999999999999999999986
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=329.13 Aligned_cols=242 Identities=26% Similarity=0.386 Sum_probs=193.6
Q ss_pred CeeccCCCeEEEEEEc----CCCCEEEEEEccccc----hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 685 NIIGDGGFGTVYKAAL----PDGKTVAVKKLSQAK----TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+.||+|+||.||+|+. .+++.||+|++.... ......+..|+.+++.++||||+++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999975 257899999987532 22234567899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++|+|.+++.... .+.+..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 82 LSGGELFMHLEREG----IFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCchHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 99999999997643 4678888999999999999999 8999999999999999999999999999987543211
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......|++.|+|||++.+..++.++||||+||++|||++|+.||..... .. ....+..+.. ..
T Consensus 155 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~-------~~-~~~~~~~~~~------~~ 219 (323)
T cd05584 155 -TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR-------KK-TIDKILKGKL------NL 219 (323)
T ss_pred -CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH-------HH-HHHHHHcCCC------CC
Confidence 222345689999999999988899999999999999999999999864321 11 1122221111 00
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
+......+.+++.+||+.||++|| ++++++++
T Consensus 220 ----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 220 ----PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred ----CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 111234577899999999999999 78888764
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=330.59 Aligned_cols=250 Identities=22% Similarity=0.319 Sum_probs=196.6
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
++||+|+||.||+|++. +++.||+|+++... ......+..|..++..+ +||||+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999875 68899999987532 22345577899999888 799999999999999999999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
|+|.+++.... .+++..+..++.|++.|++||| +.|++||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 g~L~~~~~~~~----~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~~~ 152 (329)
T cd05588 81 GDLMFHMQRQR----KLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-GDT 152 (329)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccC-CCc
Confidence 99999886543 5889999999999999999999 899999999999999999999999999998643211 122
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc-cCCchHHHHHHHhhcCccccccCccccC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI-EGGNLVGWVFQKMKKGQAADVLDPTVLT 918 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (959)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||....... .......+..+.+...... -|
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---~p---- 225 (329)
T cd05588 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR---IP---- 225 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC---CC----
Confidence 234578999999999999999999999999999999999999996422111 1122223333333332111 01
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCC------HHHHHHH
Q 002155 919 ADSKPMMLKMLRIAGDCLSDNPAMRPT------MLHVLKF 952 (959)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rps------~~ell~~ 952 (959)
......+.+++.+|++.||++||+ +++++++
T Consensus 226 ---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 226 ---RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred ---CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 112345788999999999999997 5677653
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=334.92 Aligned_cols=261 Identities=25% Similarity=0.350 Sum_probs=194.2
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecC-----CceE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD-----EEKL 751 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~ 751 (959)
+|++.++||+|+||.||+|+.. +++.||||++... .......+.+|+++++.++||||+++++++... ...|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4788899999999999999865 6899999998643 223345678999999999999999999987543 2479
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||++ ++|.+++.... .+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 81 VVFELME-SDLHQVIKAND----DLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEecCC-CCHHHHHHhcc----cCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 9999995 68988887543 4889999999999999999999 89999999999999999999999999999975
Q ss_pred cccccc--cccccccccccccCCCcCCC--CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHH-------
Q 002155 832 ISACET--HVSTDIAGTFGYIPPEYGQS--GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF------- 900 (959)
Q Consensus 832 ~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~------- 900 (959)
...... .......||+.|+|||++.+ ..++.++||||+||++|||++|++||...... .....+.
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~----~~~~~~~~~~~~~~ 228 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV----HQLDLITDLLGTPS 228 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH----HHHHHHHHHhCCCC
Confidence 432111 11234578999999998765 57899999999999999999999998643210 0000000
Q ss_pred ----HHhhcCccc---ccc---CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 901 ----QKMKKGQAA---DVL---DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 901 ----~~~~~~~~~---~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..+...... ..+ .+.............+.+++.+||+.||++||+++|++++
T Consensus 229 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 229 PETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000000000 000 0000000001123457789999999999999999999865
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=329.35 Aligned_cols=248 Identities=35% Similarity=0.577 Sum_probs=191.4
Q ss_pred CCeeccCCCeEEEEEEcC-----CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 684 TNIIGDGGFGTVYKAALP-----DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.+.||.|+||.||+|.+. .+..|+||.+.... ....+.+.+|++.+++++||||++++|++...+..++||||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 568999999999999876 25679999996543 334678999999999999999999999999888899999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++|+|.+++.... ...+++.+++.|+.||++||+||| +.+++||||+++||+++.++.+||+|||++........
T Consensus 84 ~~g~L~~~L~~~~--~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 84 PGGSLDDYLKSKN--KEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp TTEBHHHHHHHTC--TTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred ccccccccccccc--cccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc
Confidence 9999999999862 235889999999999999999999 78999999999999999999999999999987632211
Q ss_pred -cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 838 -HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 838 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
...........|+|||.+....++.++||||||+++||+++ |+.||... . .. .+...+.......
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~----~---~~-~~~~~~~~~~~~~----- 225 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY----D---NE-EIIEKLKQGQRLP----- 225 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS----C---HH-HHHHHHHTTEETT-----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc----c---cc-cccccccccccce-----
Confidence 12223346779999999888889999999999999999999 67886432 1 11 1222333222211
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 953 (959)
....+...+.+++.+||+.||++||+++++++.|
T Consensus 226 ----~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 ----IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1112344677899999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=324.35 Aligned_cols=252 Identities=27% Similarity=0.355 Sum_probs=200.9
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch---hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT---QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
+|++.++||+|+||.||+|... +++.||+|++..... .....+.+|+.+++.++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4778899999999999999865 688999999865322 223456789999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++|+|.+++.... ...+++..+..++.|++.|++||| +.|++||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 81 LMNGGDLKFHIYNMG--NPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred ccCCCcHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 999999999886543 235889999999999999999999 889999999999999999999999999999765322
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
. ......|++.|+|||++.+..++.++||||+||++||+++|..||...... .....+...+....
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~----~~~~~~~~~~~~~~-------- 221 (285)
T cd05605 156 E--TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK----VKREEVERRVKEDQ-------- 221 (285)
T ss_pred C--ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh----hHHHHHHHHhhhcc--------
Confidence 1 122346899999999998888999999999999999999999999653211 11111222221111
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
..........+.+++.+||+.||++|| ++++++++
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 222 --EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred --cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 011222445678899999999999999 88898764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-36 Score=322.55 Aligned_cols=264 Identities=26% Similarity=0.431 Sum_probs=203.1
Q ss_pred cCCCCCCeeccCCCeEEEEEEc-----CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceec--CCceE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAAL-----PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF--DEEKL 751 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~ 751 (959)
.+|++.+.||+|+||.||+|.. .+++.||+|++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4678889999999999999974 2578999999877666666788999999999999999999987643 34678
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||+++|+|.+++.... ..+++..++.++.|++.|++||| +.|++||||||+||++++++.+||+|||++..
T Consensus 84 lv~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR---ERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred EEEEecCCCCHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCccccc
Confidence 9999999999999997643 24788999999999999999999 89999999999999999999999999999986
Q ss_pred cccccccc--cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc--------cCCchHHHHHH
Q 002155 832 ISACETHV--STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI--------EGGNLVGWVFQ 901 (959)
Q Consensus 832 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~--------~~~~~~~~~~~ 901 (959)
........ .....++..|+|||...+..++.++||||+|+++|||++|..|+....... ..........+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIE 237 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHH
Confidence 64322211 111223456999999988889999999999999999999887754321110 00001111111
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+.... ..+........+.+++.+||+.+|++|||+.|+++.|++++
T Consensus 238 ~~~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 238 LLKNNG---------RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred HHhcCC---------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 111110 01112223456889999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=334.33 Aligned_cols=200 Identities=25% Similarity=0.350 Sum_probs=173.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||+||+|+.. +++.||+|++.... ......+..|+.++.+++||+|+++++++.++...|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47889999999999999999865 58899999987542 223356778999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 81 EFLPGGDMMTLLMKKD----TLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred cCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 9999999999997643 5888999999999999999999 89999999999999999999999999999875432
Q ss_pred ccc----------------------------------cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCC
Q 002155 835 CET----------------------------------HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK 880 (959)
Q Consensus 835 ~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~ 880 (959)
... ......+||+.|+|||++.+..++.++||||+||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 100 0012347999999999999999999999999999999999999
Q ss_pred CCCCC
Q 002155 881 EPTGP 885 (959)
Q Consensus 881 ~p~~~ 885 (959)
.||..
T Consensus 234 ~Pf~~ 238 (363)
T cd05628 234 PPFCS 238 (363)
T ss_pred CCCCC
Confidence 99965
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-36 Score=330.36 Aligned_cols=245 Identities=25% Similarity=0.368 Sum_probs=193.0
Q ss_pred CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHH---hcCCCCceeccccceecCCceEEE
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETL---GKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l---~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
|++.+.||+|+||.||+|.+. +++.||||++.... ....+.+..|++++ +.++||||+++++++..++..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567889999999999999865 68999999987542 22234455665544 567899999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++|+|..+++.. .+++..+..++.|++.|++||| +.|++||||||+||+++.++.+||+|||+++...
T Consensus 81 ~E~~~~~~L~~~~~~~-----~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 81 MEYAAGGDLMMHIHTD-----VFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EcCCCCCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 9999999999888642 4889999999999999999999 8999999999999999999999999999986533
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.. ........|++.|+|||.+.+..++.++||||+||++|||++|+.||...... . +...+..... ..
T Consensus 153 ~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-------~-~~~~i~~~~~---~~ 220 (324)
T cd05589 153 GF-GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-------E-VFDSIVNDEV---RY 220 (324)
T ss_pred CC-CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-------H-HHHHHHhCCC---CC
Confidence 21 12223457899999999999989999999999999999999999998643211 1 1122221111 01
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
+......+.+++.+||+.||++|| ++.+++++
T Consensus 221 -------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 221 -------PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred -------CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 111234577899999999999999 57777654
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=317.48 Aligned_cols=248 Identities=27% Similarity=0.406 Sum_probs=195.9
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCH
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
+.||+|+||.||+|++. +++.||+|.+.... ......+.+|++++++++||||+++++++..+...++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46999999999999875 68899999876433 33446688999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccc-c
Q 002155 763 DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS-T 841 (959)
Q Consensus 763 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~-~ 841 (959)
.++++... ..+++.+++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||++........... .
T Consensus 81 ~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 81 LTFLRTEG---PRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred HHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence 99997543 34788999999999999999999 89999999999999999999999999999875432111110 1
Q ss_pred cccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCC
Q 002155 842 DIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTAD 920 (959)
Q Consensus 842 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (959)
....+..|+|||.+.++.++.++||||+|+++||+++ |..||...... .......... .+ ..
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--------~~~~~~~~~~-----~~----~~ 217 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--------QTREAIEQGV-----RL----PC 217 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--------HHHHHHHcCC-----CC----CC
Confidence 1123457999999998889999999999999999998 88887542111 1111111110 00 11
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 921 SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
+......+.+++.+||+.+|++||++.++.+.|++
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 12234568899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-36 Score=318.42 Aligned_cols=254 Identities=30% Similarity=0.474 Sum_probs=202.5
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
++|++.+.||+|+||.||+|.+.++..+|+|.+.... ...+.+.+|++++++++||+++++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 4578889999999999999998777789999876433 23456888999999999999999998875 466899999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+++|.++++... ...+++..+..++.|++.|++||| +.|++||||||+||++++++.++|+|||.+.........
T Consensus 84 ~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05069 84 KGSLLDFLKEGD--GKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc
Confidence 999999997643 234788999999999999999999 889999999999999999999999999999765432222
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......++..|+|||...+..++.++||||+|+++|||++ |..||...... . ....+..... +
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~----~~~~~~~~~~-----~--- 222 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR----E----VLEQVERGYR-----M--- 222 (260)
T ss_pred ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH----H----HHHHHHcCCC-----C---
Confidence 2222345678999999988889999999999999999999 88888542211 1 1122221110 1
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
.........+.+++.+||.+||++||+++++++.|+++
T Consensus 223 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 260 (260)
T cd05069 223 -PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLEDY 260 (260)
T ss_pred -CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 11223445788999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-36 Score=329.32 Aligned_cols=236 Identities=27% Similarity=0.374 Sum_probs=189.4
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
++||+|+||.||+|+.+ +++.||+|++.... ....+.+..|..++... +||||+++++++...+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999875 58899999987532 23345566788888776 699999999999999999999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
|+|.+++.... .+++..+..++.|++.||+||| +.|++||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 g~L~~~i~~~~----~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~-~~~ 152 (320)
T cd05590 81 GDLMFHIQKSR----RFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN-GKT 152 (320)
T ss_pred chHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC-CCc
Confidence 99999987653 5788999999999999999999 899999999999999999999999999998753221 122
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (959)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .+.+.+..... ..|
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--------~~~~~i~~~~~---~~~----- 216 (320)
T cd05590 153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED--------DLFEAILNDEV---VYP----- 216 (320)
T ss_pred ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHhcCCC---CCC-----
Confidence 23456899999999999889999999999999999999999999643211 11222222111 111
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCH
Q 002155 920 DSKPMMLKMLRIAGDCLSDNPAMRPTM 946 (959)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rps~ 946 (959)
......+.+++.+|++.||++||++
T Consensus 217 --~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 217 --TWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred --CCCCHHHHHHHHHHcccCHHHCCCC
Confidence 1123467789999999999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-36 Score=321.34 Aligned_cols=256 Identities=26% Similarity=0.422 Sum_probs=199.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCC----EEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGK----TVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
++|++.+.||+|+||+||+|.+. +++ .+|+|.+.... .....++..|+..+++++||||+++++++. +...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 46888999999999999999864 344 47778775432 233456778888999999999999999875 456789
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
++||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.+||+|||.++..
T Consensus 86 i~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR---DSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred EEEeCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 999999999999997644 35789999999999999999999 889999999999999999999999999999765
Q ss_pred ccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 833 SACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 833 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
....... .....++..|+|||...++.++.++||||||+++||+++ |..||...... . ..+.+..+...
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~----~----~~~~~~~~~~~- 230 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH----E----VPDLLEKGERL- 230 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----H----HHHHHHCCCcC-
Confidence 4322211 223346778999999988899999999999999999998 99998543211 1 11122211111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
..+. .+...+.+++.+||..||++||++.|+++.|+.+..
T Consensus 231 -~~~~-------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 231 -AQPQ-------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred -CCCC-------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 0111 122356778899999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=329.70 Aligned_cols=242 Identities=26% Similarity=0.359 Sum_probs=193.4
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
++||+|+||.||+|+.. +++.||+|++.... ....+.+..|.+++..+ +||+|+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999875 57899999987532 23344567788888866 799999999999999999999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
|+|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++....... ..
T Consensus 81 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~ 152 (321)
T cd05591 81 GDLMFQIQRSR----KFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VT 152 (321)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCC-cc
Confidence 99999887643 4788899999999999999999 8999999999999999999999999999987543211 22
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (959)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ..+.+.... ...|.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~-------~-~~~~i~~~~---~~~p~---- 217 (321)
T cd05591 153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED-------D-LFESILHDD---VLYPV---- 217 (321)
T ss_pred ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH-------H-HHHHHHcCC---CCCCC----
Confidence 23456899999999999889999999999999999999999999653211 1 122222211 11111
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCC-------CHHHHHHH
Q 002155 920 DSKPMMLKMLRIAGDCLSDNPAMRP-------TMLHVLKF 952 (959)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rp-------s~~ell~~ 952 (959)
.....+.+++.+|++.||++|| ++++++++
T Consensus 218 ---~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 218 ---WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred ---CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 1234677899999999999999 78888754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=331.70 Aligned_cols=242 Identities=21% Similarity=0.317 Sum_probs=193.9
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNG 760 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 760 (959)
+.||+|+||.||+|+.. +|+.||+|++.... ......+..|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 68999999987532 223455678999999999999999999999999999999999999
Q ss_pred CHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 761 SLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT-PHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 761 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
+|.+++.... .+++..+..++.|++.||+||| + .||+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~ 152 (325)
T cd05594 81 ELFFHLSRER----VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-AT 152 (325)
T ss_pred cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-cc
Confidence 9999887543 5789999999999999999999 6 799999999999999999999999999987532211 12
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (959)
.....||+.|+|||++.+..++.++||||+||++|||++|..||...... .....+..... ..|
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--------~~~~~i~~~~~---~~p----- 216 (325)
T cd05594 153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEEI---RFP----- 216 (325)
T ss_pred cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--------HHHHHHhcCCC---CCC-----
Confidence 23356899999999999889999999999999999999999998643211 11111111110 001
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 920 DSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
......+.+++.+||+.||++|+ ++.+++++
T Consensus 217 --~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 217 --RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred --CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 11234577899999999999997 89998865
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-36 Score=324.38 Aligned_cols=257 Identities=28% Similarity=0.453 Sum_probs=201.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCC-C--CEEEEEEcccc-chhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPD-G--KTVAVKKLSQA-KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~-~--~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 753 (959)
++|++.++||+|+||.||+|.+++ + ..+|+|.++.. .....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 578889999999999999998753 3 34788887643 333456788999999999 799999999999988999999
Q ss_pred EEeccCCCHHHHHhhhcC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcE
Q 002155 754 YEYMVNGSLDLWLRNRTG------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEA 821 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 821 (959)
|||+++++|.++++.... ....+++..+..++.|++.|++||| +.|++||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCeE
Confidence 999999999999976431 1134788999999999999999999 8999999999999999999999
Q ss_pred EEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHH
Q 002155 822 KVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 822 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 900 (959)
||+|||++...... ........+..|+|||++.+..++.++|||||||++|||++ |..||...... . +.
T Consensus 159 kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-------~-~~ 228 (297)
T cd05089 159 KIADFGLSRGEEVY--VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-------E-LY 228 (297)
T ss_pred EECCcCCCccccce--eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-------H-HH
Confidence 99999998643211 11111223457999999988889999999999999999998 99998543211 1 11
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.....+. .+. .+..+...+.+++.+||+.+|.+||+++++++.|+++.
T Consensus 229 ~~~~~~~-----~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 276 (297)
T cd05089 229 EKLPQGY-----RME----KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRML 276 (297)
T ss_pred HHHhcCC-----CCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 2221111 011 11123346788999999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-36 Score=342.87 Aligned_cols=261 Identities=24% Similarity=0.296 Sum_probs=192.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecC--------C
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD--------E 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------~ 748 (959)
..+|++.++||+|+||.||+|... +++.||||++.... ....+|+.+++.++||||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 467999999999999999999875 58899999885432 2235799999999999999998876432 2
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC-cEEEcccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF-EAKVADFG 827 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg 827 (959)
..++||||+++ ++.+++.........+++..++.++.|++.||+||| +.||+||||||+||+++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 35689999975 787777654333456889999999999999999999 89999999999999998664 79999999
Q ss_pred cccccccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 828 LARLISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
+++...... ......||+.|+|||++.+. .++.++||||+||++|||++|.+||...... +....+.......
T Consensus 217 la~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~----~~~~~i~~~~~~p 290 (440)
T PTZ00036 217 SAKNLLAGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV----DQLVRIIQVLGTP 290 (440)
T ss_pred cchhccCCC--CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHHhCCC
Confidence 998664322 22345689999999987654 6899999999999999999999998653221 1111111110000
Q ss_pred c----------cccccCccccCC-----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 Q----------AADVLDPTVLTA-----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 ~----------~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ......+...+. .+......+.+++.+||+.||.+|||+.|++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 291 TEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred CHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 0 000000111000 011123467899999999999999999999854
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=326.00 Aligned_cols=241 Identities=25% Similarity=0.363 Sum_probs=189.1
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhc-CCCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGK-VKHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
++||+|+||.||+|+.. +++.||+|+++... ....+.+..|..++.. .+||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999875 57889999987532 2223345556666654 4899999999999999999999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
|+|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~~~~~~----~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~ 152 (316)
T cd05592 81 GDLMFHIQSSG----RFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GK 152 (316)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Cc
Confidence 99999987643 4788999999999999999999 8999999999999999999999999999997543222 22
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (959)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..+...+... .+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~------~~~~--- 215 (316)
T cd05592 153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE--------DELFDSILND------RPHF--- 215 (316)
T ss_pred cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcC------CCCC---
Confidence 3345789999999999988999999999999999999999999864321 1112222111 0111
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 002155 920 DSKPMMLKMLRIAGDCLSDNPAMRPTML-HVLK 951 (959)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rps~~-ell~ 951 (959)
+......+.+++.+||+.||++||++. ++++
T Consensus 216 -~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 216 -PRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred -CCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 111234567889999999999999875 5543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-36 Score=325.88 Aligned_cols=257 Identities=30% Similarity=0.486 Sum_probs=200.5
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCC--EEEEEEcccc-chhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGK--TVAVKKLSQA-KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 753 (959)
++|++.+.||+|+||.||+|.++ ++. .+|+|.+... .......+.+|+.++.++ +||||+++++++..++..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 57888999999999999999865 344 4677776543 233456788899999999 899999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcE
Q 002155 754 YEYMVNGSLDLWLRNRTG------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEA 821 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 821 (959)
|||+++++|.++++.... ....+++.+++.++.|++.|++||| +.|++||||||+||++++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCCcE
Confidence 999999999999976431 1235788999999999999999999 8999999999999999999999
Q ss_pred EEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHH
Q 002155 822 KVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 822 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 900 (959)
||+|||++...... .......++..|+|||.+.+..++.++|||||||++|||+| |..||...... + ..
T Consensus 164 kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~----~~ 233 (303)
T cd05088 164 KIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA----E----LY 233 (303)
T ss_pred EeCccccCcccchh--hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH----H----HH
Confidence 99999998643211 11111234568999999888889999999999999999998 99998532111 1 11
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
....... .+. ........+.+++.+||+.+|++||+++++++.++++.
T Consensus 234 ~~~~~~~-----~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~ 281 (303)
T cd05088 234 EKLPQGY-----RLE----KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 281 (303)
T ss_pred HHHhcCC-----cCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1221110 000 01112346788999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=340.23 Aligned_cols=252 Identities=23% Similarity=0.294 Sum_probs=196.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 46888999999999999999865 68999999986532 233456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.+..
T Consensus 81 E~~~gg~L~~~l~~~~----~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 81 EFLPGGDLMTMLIKYD----TFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9999999999997643 5788899999999999999999 89999999999999999999999999999864321
Q ss_pred cccc----------------------------------------------ccccccccccccCCCcCCCCCCCCcCcchh
Q 002155 835 CETH----------------------------------------------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYS 868 (959)
Q Consensus 835 ~~~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws 868 (959)
.... ......||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 233 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence 0000 001246899999999999889999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCC---CC
Q 002155 869 FGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMR---PT 945 (959)
Q Consensus 869 lG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---ps 945 (959)
+||++|||++|.+||...... . ....+.... .....| ........+.+++.+|+. +|.+| ++
T Consensus 234 lGvil~elltG~~Pf~~~~~~-------~-~~~~i~~~~-~~~~~p-----~~~~~s~~~~dli~~lL~-~~~~r~~r~~ 298 (377)
T cd05629 234 LGAIMFECLIGWPPFCSENSH-------E-TYRKIINWR-ETLYFP-----DDIHLSVEAEDLIRRLIT-NAENRLGRGG 298 (377)
T ss_pred cchhhhhhhcCCCCCCCCCHH-------H-HHHHHHccC-CccCCC-----CCCCCCHHHHHHHHHHhc-CHhhcCCCCC
Confidence 999999999999999643211 1 111111110 000001 111123457788889997 66665 59
Q ss_pred HHHHHHH
Q 002155 946 MLHVLKF 952 (959)
Q Consensus 946 ~~ell~~ 952 (959)
+.|++++
T Consensus 299 ~~~~l~h 305 (377)
T cd05629 299 AHEIKSH 305 (377)
T ss_pred HHHHhcC
Confidence 9998875
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=340.48 Aligned_cols=251 Identities=22% Similarity=0.240 Sum_probs=193.3
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
+|++.++||+|+||.||+|+.. +++.||+|++.... ......+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999865 68899999987532 2334567889999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++|+|.+++.... .+++..+..++.|++.|++||| +.||+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~gg~L~~~l~~~~----~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 82 YIPGGDMMSLLIRMG----IFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred CCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 999999999987643 4788889999999999999999 899999999999999999999999999997532100
Q ss_pred c----------------------------------------------ccccccccccccccCCCcCCCCCCCCcCcchhH
Q 002155 836 E----------------------------------------------THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSF 869 (959)
Q Consensus 836 ~----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvwsl 869 (959)
. ........||+.|+|||++.+..++.++||||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 0 000122468999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC---H
Q 002155 870 GVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT---M 946 (959)
Q Consensus 870 G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~ 946 (959)
||++|||++|++||...... ........... ....| ..........+++.+|+ .+|++|++ +
T Consensus 235 Gvil~elltG~~Pf~~~~~~-------~~~~~i~~~~~--~~~~p-----~~~~~s~~~~~li~~l~-~~p~~R~~~~~~ 299 (382)
T cd05625 235 GVILYEMLVGQPPFLAQTPL-------ETQMKVINWQT--SLHIP-----PQAKLSPEASDLIIKLC-RGPEDRLGKNGA 299 (382)
T ss_pred hHHHHHHHhCCCCCCCCCHH-------HHHHHHHccCC--CcCCC-----CcccCCHHHHHHHHHHc-cCHhHcCCCCCH
Confidence 99999999999999653211 11111111100 00001 01112234556666665 59999997 8
Q ss_pred HHHHHH
Q 002155 947 LHVLKF 952 (959)
Q Consensus 947 ~ell~~ 952 (959)
.|++++
T Consensus 300 ~ei~~h 305 (382)
T cd05625 300 DEIKAH 305 (382)
T ss_pred HHHhcC
Confidence 887754
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-36 Score=324.86 Aligned_cols=260 Identities=31% Similarity=0.481 Sum_probs=205.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 749 (959)
.++|+..+.||+|+||.||+|... ....+|+|.+.... .....++.+|+.+++++ +||||+++++++..++.
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 456888999999999999999864 23679999887532 33345688899999999 89999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhc------------CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC
Q 002155 750 KLLVYEYMVNGSLDLWLRNRT------------GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE 817 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 817 (959)
.++||||+++|+|.++++... .....+++..++.++.|++.|++||| +.+|+||||||+||++++
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEEEcC
Confidence 999999999999999997532 22346889999999999999999999 899999999999999999
Q ss_pred CCcEEEcccccccccccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCch
Q 002155 818 EFEAKVADFGLARLISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNL 895 (959)
Q Consensus 818 ~~~~kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~ 895 (959)
++.+||+|||.++......... .....++..|+|||+..+..++.++|||||||++||+++ |..||.....
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------- 240 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV------- 240 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH-------
Confidence 9999999999998654322111 122234578999999888889999999999999999998 8888754211
Q ss_pred HHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 896 VGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..+.+.+....... ........+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 241 -~~~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 241 -EELFKLLKEGYRME---------KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred -HHHHHHHHcCCcCC---------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11222222221110 11123346889999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=332.66 Aligned_cols=255 Identities=24% Similarity=0.273 Sum_probs=198.9
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
..++|++.+.||+|+||.||+|+.+ +++.||+|++.... ......+.+|+.+++.++||||+++++++..++..++
T Consensus 41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (371)
T cd05622 41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM 120 (371)
T ss_pred chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 4578999999999999999999876 57899999986422 2234457789999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 121 v~Ey~~gg~L~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~ 192 (371)
T cd05622 121 VMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (371)
T ss_pred EEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCceeEc
Confidence 99999999999998754 3678888999999999999999 899999999999999999999999999999876
Q ss_pred ccccccccccccccccccCCCcCCCCC----CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGR----STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
............||+.|+|||++.+.. ++.++||||+||++|||++|..||..... .......+.....
T Consensus 193 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-------~~~~~~i~~~~~~ 265 (371)
T cd05622 193 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-------VGTYSKIMNHKNS 265 (371)
T ss_pred CcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCCCc
Confidence 433322333457999999999876543 78999999999999999999999964321 1111111111111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAM--RPTMLHVLKFL 953 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~ell~~L 953 (959)
... +...+....+.+++.+|+..+|.+ |++++|++++.
T Consensus 266 ~~~-------~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 266 LTF-------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred ccC-------CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 111 111233446778888999844433 78999998763
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-36 Score=328.53 Aligned_cols=246 Identities=26% Similarity=0.324 Sum_probs=195.1
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCC-ceeccccceecCCceEEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQ-NLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv~ 754 (959)
+|++.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+..|.++++.++|+ +|+++++++...+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999876 57889999987532 23345677899999999765 5888999999899999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~~~~~~----~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 81 EYVNGGDLMYHIQQVG----KFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred cCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 9999999999987643 4788899999999999999999 89999999999999999999999999999864321
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.....
T Consensus 154 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--------~~~~~i~~~~~------ 218 (324)
T cd05587 154 G-GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--------ELFQSIMEHNV------ 218 (324)
T ss_pred C-CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCC------
Confidence 1 11223456899999999999999999999999999999999999998643211 11122221110
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM-----LHVLK 951 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~ell~ 951 (959)
. .+......+.+++.+||+.||.+|+++ +++++
T Consensus 219 ~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 256 (324)
T cd05587 219 S----YPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIRE 256 (324)
T ss_pred C----CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 0 011233467889999999999999976 56654
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=318.53 Aligned_cols=256 Identities=25% Similarity=0.398 Sum_probs=200.4
Q ss_pred CCCCCeeccCCCeEEEEEEcCC----CCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCc-----
Q 002155 681 FCKTNIIGDGGFGTVYKAALPD----GKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE----- 749 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 749 (959)
|++.+.||+|+||.||+|.... +..||+|.++... ......+.+|++.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678899999999999998642 3679999987432 3345678899999999999999999998865544
Q ss_pred -eEEEEEeccCCCHHHHHhhhcC--CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 750 -KLLVYEYMVNGSLDLWLRNRTG--SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 750 -~~lv~e~~~~g~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
.++||||+++|+|.+++..... ....+++..+..++.|++.|++||| +.+++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCc
Confidence 6899999999999999865432 2246889999999999999999999 889999999999999999999999999
Q ss_pred cccccccccccccc-ccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhh
Q 002155 827 GLARLISACETHVS-TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMK 904 (959)
Q Consensus 827 g~~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (959)
|.++.......... ....++..|+|||+..+..++.++|||||||++|||++ |..||..... .... +.+.
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~----~~~~----~~~~ 229 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN----HEIY----DYLR 229 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH----HHHH----HHHH
Confidence 99976543322211 11234678999999988889999999999999999999 8888754211 1111 2222
Q ss_pred cCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
.+... . .+..+...+.+++.+||+.||++||++.|+++.|+++
T Consensus 230 ~~~~~-----~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 230 HGNRL-----K----QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred cCCCC-----C----CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111 1 1122345788999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-36 Score=335.64 Aligned_cols=264 Identities=27% Similarity=0.310 Sum_probs=197.1
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCC-----ceE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE-----EKL 751 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~ 751 (959)
+|++.+.||+|+||.||+|++. +|+.||+|++... .....+.+.+|+++++.++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778999999999999999864 6899999998643 2233456889999999999999999999997766 789
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||+. ++|.+++.... .+++..+..++.|++.||+||| +.|++||||||+||+++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~l~~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ----PLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEeeccc-cCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceee
Confidence 9999996 57888775533 5889999999999999999999 89999999999999999999999999999976
Q ss_pred cccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCC---------chHH----
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGG---------NLVG---- 897 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~---------~~~~---- 897 (959)
.............+++.|+|||++.+. .++.++||||+||++|||++|+.||........-. ....
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 232 (372)
T cd07853 153 EEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSA 232 (372)
T ss_pred cccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 543333333344678999999988764 47899999999999999999999996532210000 0000
Q ss_pred --HHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 898 --WVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 898 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.....+..........+ ............+.+++.+|++.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 233 CEGARAHILRGPHKPPSLP-VLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred hHHHHHHHHhCCCCCCchH-HhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00000000000000000 0000111224567889999999999999999999875
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=315.05 Aligned_cols=247 Identities=28% Similarity=0.421 Sum_probs=197.6
Q ss_pred CeeccCCCeEEEEEEcCCCCEEEEEEccccch-hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCHH
Q 002155 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLD 763 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~ 763 (959)
++||+|+||.||+|...+++.||+|.+..... .....+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36999999999999988889999999875432 23346888999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccccccc
Q 002155 764 LWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDI 843 (959)
Q Consensus 764 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 843 (959)
+++.... ..+++..++.++.|++.|+.|+| +.|++||||||+||+++.++.+|++|||++..............
T Consensus 81 ~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (250)
T cd05085 81 SFLRKKK---DELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLK 154 (250)
T ss_pred HHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCC
Confidence 9987543 24788999999999999999999 89999999999999999999999999999875432211111222
Q ss_pred cccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCH
Q 002155 844 AGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSK 922 (959)
Q Consensus 844 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (959)
.++..|+|||+..+..++.++||||||+++||+++ |..||...... .....+...... . ...
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--------~~~~~~~~~~~~-----~----~~~ 217 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--------QAREQVEKGYRM-----S----CPQ 217 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHHcCCCC-----C----CCC
Confidence 34568999999988889999999999999999998 89898543111 111222221111 0 111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 002155 923 PMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954 (959)
Q Consensus 923 ~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 954 (959)
.....+.+++.+||..+|++||++.|+++.|+
T Consensus 218 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 218 KCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 23457889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=321.56 Aligned_cols=262 Identities=24% Similarity=0.394 Sum_probs=207.3
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcCC-----CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceec-CCc
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALPD-----GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSF-DEE 749 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~ 749 (959)
..++|++.++||+|+||.||+|.+.+ +..||+|++.... ......+.+|+.++++++|||++++++++.. +..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 35678899999999999999998765 6789999886542 3345668889999999999999999998765 467
Q ss_pred eEEEEEeccCCCHHHHHhhhcCC----ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGS----LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVAD 825 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 825 (959)
.++++||+++++|.+++...... ...+++.+++.++.|++.|++||| +.+++||||||+||+++.++.+|++|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECC
Confidence 89999999999999999765322 146889999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHh
Q 002155 826 FGLARLISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKM 903 (959)
Q Consensus 826 fg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 903 (959)
||+++.+....... .....++..|+|||+..+..++.++||||+|+++||+++ |+.||..... ..+.. .+
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~~~~----~~ 232 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP----FEMAA----YL 232 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH----HHHHH----HH
Confidence 99997654322221 122345678999999988889999999999999999999 9999854211 11211 11
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.... ... ....+...+.+++.+||..||++|||+.++++.|+++..
T Consensus 233 ~~~~-----~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 233 KDGY-----RLA----QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred HcCC-----CCC----CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1111 000 011123467899999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-36 Score=326.60 Aligned_cols=240 Identities=25% Similarity=0.378 Sum_probs=190.3
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
++||+|+||.||+|+++ +|+.||+|+++... ......+..|..++... +||+|+++++++..++..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999876 58899999987532 22334566677777654 899999999999999999999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
|+|.+++.... .+++.++..++.|+++|++||| +.||+||||||+||+++.++.++|+|||+++.... ....
T Consensus 81 g~L~~~i~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~-~~~~ 152 (316)
T cd05620 81 GDLMFHIQDKG----RFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF-GDNR 152 (316)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeeccc-CCCc
Confidence 99999987643 4788899999999999999999 89999999999999999999999999999864321 1122
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (959)
.....||+.|+|||++.+..++.++||||+||++|||++|..||..... ....+.+.... +...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--------~~~~~~~~~~~------~~~~-- 216 (316)
T cd05620 153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--------DELFESIRVDT------PHYP-- 216 (316)
T ss_pred eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCC------CCCC--
Confidence 3345789999999999999999999999999999999999999964321 11222222111 1111
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 002155 920 DSKPMMLKMLRIAGDCLSDNPAMRPTML-HVL 950 (959)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rps~~-ell 950 (959)
......+.+++.+||+.||++||++. +++
T Consensus 217 --~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 217 --RWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred --CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 11234577899999999999999985 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-36 Score=318.07 Aligned_cols=256 Identities=31% Similarity=0.502 Sum_probs=206.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.++||+|+||.||+|.+++++.||||.+..... ..+++.+|+.++++++|||++++++++..+...++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 467889999999999999999988888999999875432 3467889999999999999999999999889999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++....+ ..+++.++..++.|++.|++||| +.+++||||||+||++++++.++++|||.+........
T Consensus 84 ~~~~L~~~i~~~~~--~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 84 SKGSLLDFLKSGEG--KKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred CCCCHHHHHhcccc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 99999999976432 35789999999999999999999 88999999999999999999999999999876543222
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......++..|+|||...+..++.++||||+|+++||+++ |+.||..... .. ....+.... ...
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~----~~----~~~~~~~~~-----~~~- 224 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN----RE----VLEQVERGY-----RMP- 224 (261)
T ss_pred hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH----HH----HHHHHHcCC-----CCC-
Confidence 22222234568999999988889999999999999999999 8999854211 11 112221111 000
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
........+.+++.+|++.+|++||+++++.+.|+++
T Consensus 225 ---~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~~ 261 (261)
T cd05034 225 ---RPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLEDY 261 (261)
T ss_pred ---CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhcC
Confidence 0111234688899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=322.41 Aligned_cols=259 Identities=31% Similarity=0.441 Sum_probs=203.8
Q ss_pred CCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
+|++.+.||+|+||.||+|+.. ....+|+|.+.... .....++.+|+.+++.++||||+++++.+..++..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999853 23568888886543 3345678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcC--------------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCC
Q 002155 753 VYEYMVNGSLDLWLRNRTG--------------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASN 812 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~N 812 (959)
||||+.+++|.+++..... ....+++.+++.++.|++.|++||| +.+++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhhe
Confidence 9999999999999875321 1235788999999999999999999 8999999999999
Q ss_pred EEECCCCcEEEccccccccccccccccc-ccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccc
Q 002155 813 ILLNEEFEAKVADFGLARLISACETHVS-TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDI 890 (959)
Q Consensus 813 ill~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~ 890 (959)
|++++++.+||+|||+++.......... ....++..|+|||...+..++.++||||||+++|||++ |..||.....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-- 235 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP-- 235 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH--
Confidence 9999999999999999976533222111 22245678999999888889999999999999999999 9988854211
Q ss_pred cCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 891 EGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
..+......... +. ........+.+++.+||+.+|++||++.|+++.|+++-.
T Consensus 236 ------~~~~~~~~~~~~-----~~----~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 236 ------ERLFNLLKTGYR-----ME----RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred ------HHHHHHHhCCCC-----CC----CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 112222222111 11 111233468889999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=322.38 Aligned_cols=250 Identities=24% Similarity=0.388 Sum_probs=203.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.+|++.+.||+|+||.||+|+.. +++.||+|.+........+.+.+|+.+++.++|||++++++++..+...++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 57888899999999999999864 68899999987655555677889999999999999999999999899999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++... .+++.++..++.|++.|++||| +.|++||||||+||+++.++.++|+|||.+........
T Consensus 100 ~~~~L~~~~~~~-----~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 100 AGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred CCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 999999998653 3688899999999999999999 89999999999999999999999999999876543221
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......+++.|+|||...+..++.++|||||||++|+|++|+.||...... .+........ . +.
T Consensus 172 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~-------~~~~~~~~~~-~-----~~-- 235 (296)
T cd06654 172 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-------RALYLIATNG-T-----PE-- 235 (296)
T ss_pred -ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH-------HhHHHHhcCC-C-----CC--
Confidence 123346888999999998888999999999999999999999998643211 1111111111 0 00
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..........+.+++.+||..||++||++.+++++
T Consensus 236 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 236 LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 01122344567889999999999999999999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=349.62 Aligned_cols=260 Identities=24% Similarity=0.323 Sum_probs=202.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.++||+|+||.||+|++. +|+.||+|++.... ....+++.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57889999999999999999875 58999999986532 223456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcC-------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccc
Q 002155 755 EYMVNGSLDLWLRNRTG-------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFG 827 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 827 (959)
||++||+|.+++..... .....++..++.++.||++||+||| +.||+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecC
Confidence 99999999999875321 1223567788999999999999999 8899999999999999999999999999
Q ss_pred cccccccccc-----------------cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc
Q 002155 828 LARLISACET-----------------HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI 890 (959)
Q Consensus 828 ~~~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~ 890 (959)
+++....... .......||+.|+|||.+.+..++.++||||+||++|||+||+.||......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~- 237 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR- 237 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh-
Confidence 9976521100 0112246899999999999999999999999999999999999998652111
Q ss_pred cCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhh
Q 002155 891 EGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-TMLHVLKFLKEI 956 (959)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~ell~~L~~l 956 (959)
.... .... ..|... ....+....+.+++.+|++.||++|| +++++++.|++.
T Consensus 238 ---ki~~--~~~i--------~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 238 ---KISY--RDVI--------LSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred ---hhhh--hhhc--------cChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0100 0000 011100 01123345678899999999999996 667777777665
|
|
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=341.08 Aligned_cols=252 Identities=22% Similarity=0.247 Sum_probs=195.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.+|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36889999999999999999865 58899999986432 223455778999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+|..+..
T Consensus 81 E~~~~g~L~~~i~~~~----~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 81 DYIPGGDMMSLLIRLG----IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 9999999999997643 4788888999999999999999 89999999999999999999999999999753210
Q ss_pred c------------------------------------------cccccccccccccccCCCcCCCCCCCCcCcchhHHHH
Q 002155 835 C------------------------------------------ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVI 872 (959)
Q Consensus 835 ~------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~i 872 (959)
. .........||+.|+|||++.+..++.++||||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 233 (376)
T cd05598 154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence 0 0000113468999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCC---CHHHH
Q 002155 873 LLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP---TMLHV 949 (959)
Q Consensus 873 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp---s~~el 949 (959)
+|||++|+.||...... .... .+..... ....+ ........+.+++.+|+ .+|.+|+ ++.|+
T Consensus 234 lyell~G~~Pf~~~~~~-------~~~~-~i~~~~~-~~~~~-----~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el 298 (376)
T cd05598 234 LYEMLVGQPPFLADTPA-------ETQL-KVINWET-TLHIP-----SQAKLSREASDLILRLC-CGAEDRLGKNGADEI 298 (376)
T ss_pred eeehhhCCCCCCCCCHH-------HHHH-HHhccCc-cccCC-----CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence 99999999999653221 1111 1111100 00001 01112334566777765 4999999 89998
Q ss_pred HHH
Q 002155 950 LKF 952 (959)
Q Consensus 950 l~~ 952 (959)
+++
T Consensus 299 l~h 301 (376)
T cd05598 299 KAH 301 (376)
T ss_pred hCC
Confidence 865
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=327.87 Aligned_cols=248 Identities=27% Similarity=0.402 Sum_probs=203.1
Q ss_pred CCCeeccCCCeEEEEEEcC--CCC--EEEEEEccccchh-hHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 683 KTNIIGDGGFGTVYKAALP--DGK--TVAVKKLSQAKTQ-GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
..+.||+|+||+|++|.|+ .|+ .||||.++..... ...+|.+|+.+|-+++|||++++||++.+ ....+|||.+
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 4578999999999999986 343 6899999866544 67789999999999999999999999876 7789999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
+.|+|.+.+++. ....+.......++.|||.|+.||. .+++||||+.++|+++-....|||+|||+.+.+...+.
T Consensus 193 plGSLldrLrka--~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned 267 (1039)
T KOG0199|consen 193 PLGSLLDRLRKA--KKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENED 267 (1039)
T ss_pred ccchHHHHHhhc--cccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence 999999999982 2345777888899999999999999 89999999999999999998999999999998765433
Q ss_pred ccc-c-cccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 838 HVS-T-DIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 838 ~~~-~-~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
+.. . ...-...|+|||.+....|+.++|||+|||++|||+| |..||-+... ..+.+.++.+
T Consensus 268 ~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g--------~qIL~~iD~~-------- 331 (1039)
T KOG0199|consen 268 MYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG--------IQILKNIDAG-------- 331 (1039)
T ss_pred ceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH--------HHHHHhcccc--------
Confidence 332 2 2234568999999999999999999999999999999 7788754221 1233333322
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 953 (959)
..-..++.+.+.+++++.+||..+|++||++..|.+.+
T Consensus 332 -erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 332 -ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred -ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 12223556778899999999999999999999997544
|
|
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=321.90 Aligned_cols=265 Identities=22% Similarity=0.364 Sum_probs=202.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-----------------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-----------------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVP 739 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~ 739 (959)
.++|++.+.||+|+||.||+|.+. ++..||+|++.... .....++.+|+.+++.++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 357889999999999999998542 23468999987543 334567889999999999999999
Q ss_pred cccceecCCceEEEEEeccCCCHHHHHhhhcCC-------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCC
Q 002155 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGS-------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASN 812 (959)
Q Consensus 740 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~N 812 (959)
+++++..++..++||||+++++|.+++...... ...+++.++..++.|++.|++||| +.|++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhe
Confidence 999999999999999999999999999764322 124778899999999999999999 8899999999999
Q ss_pred EEECCCCcEEEcccccccccccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh--CCCCCCCCCcc
Q 002155 813 ILLNEEFEAKVADFGLARLISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT--GKEPTGPEFKD 889 (959)
Q Consensus 813 ill~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt--g~~p~~~~~~~ 889 (959)
|+++.++.++|+|||.++......... .....++..|+|||...++.++.++|||||||++|||++ |..||.....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~- 239 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD- 239 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh-
Confidence 999999999999999997653322111 112234678999998888889999999999999999998 6778754211
Q ss_pred ccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 890 IEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
......+............ .+ ....+...+.+++.+||+.||++||++.++.+.|++
T Consensus 240 ---~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 240 ---EQVIENTGEFFRDQGRQVY-LP-----KPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ---HHHHHHHHHHHhhcccccc-CC-----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1111111111111100000 01 011123568899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=316.08 Aligned_cols=247 Identities=26% Similarity=0.391 Sum_probs=195.8
Q ss_pred eeccCCCeEEEEEEcC---CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCC
Q 002155 686 IIGDGGFGTVYKAALP---DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNG 760 (959)
Q Consensus 686 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 760 (959)
.||+|+||.||+|.++ +++.+|+|+++... ....+++..|+.+++.++||||+++++++. ++..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999653 57889999886433 233567889999999999999999999875 45679999999999
Q ss_pred CHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc-
Q 002155 761 SLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV- 839 (959)
Q Consensus 761 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~- 839 (959)
+|.+++.... .+++..+..++.|++.|++|+| +.|++||||||+||+++.++.+||+|||.+..........
T Consensus 81 ~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 81 PLNKFLQKNK----HVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 9999997543 4788999999999999999999 8999999999999999999999999999997664332211
Q ss_pred -cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 840 -STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 840 -~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
.....++..|+|||.+....++.++|||||||++|||++ |..||..... .. +...+..+.... .
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----~~----~~~~i~~~~~~~-----~- 219 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG----NE----VTQMIESGERME-----C- 219 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH----HH----HHHHHHCCCCCC-----C-
Confidence 112234578999999888889999999999999999998 9999864321 11 122222221111 1
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
+......+.+++.+||+.||++||++.+|.+.|++..
T Consensus 220 ---~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05116 220 ---PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNYY 256 (257)
T ss_pred ---CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhccc
Confidence 1123346788999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=318.43 Aligned_cols=256 Identities=25% Similarity=0.392 Sum_probs=197.7
Q ss_pred CCCCCeeccCCCeEEEEEEcCC-CC--EEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecC------Cc
Q 002155 681 FCKTNIIGDGGFGTVYKAALPD-GK--TVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD------EE 749 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~ 749 (959)
|.++++||+|+||.||+|.+.+ +. .||+|.++.. .....+.+..|+.+++.++||||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3467889999999999998754 32 6899987643 234456788999999999999999999876432 24
Q ss_pred eEEEEEeccCCCHHHHHhhhc--CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRT--GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFG 827 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 827 (959)
.++||||+++|+|.+++.... .....+++..+..++.|++.|++||| +.+|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCC
Confidence 689999999999999885432 12345789999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhc
Q 002155 828 LARLISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKK 905 (959)
Q Consensus 828 ~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (959)
+++......... .....+++.|+|||...+..++.++||||||+++|||++ |..||..... . .....+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~----~~~~~~~~ 229 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN----S----EIYDYLRQ 229 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH----H----HHHHHHHc
Confidence 998764322211 112245678999999998899999999999999999999 7888754211 1 12222322
Q ss_pred CccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
+.... ........+.+++.+||+.||++|||+.++++.|+++
T Consensus 230 ~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 230 GNRLK---------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 21110 0112334578999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=322.98 Aligned_cols=258 Identities=28% Similarity=0.447 Sum_probs=204.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 749 (959)
.++|.+.+.||+|+||.||+|.+. ++..||||+++... ....+.+.+|+.+++++ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 357889999999999999999742 35579999887543 33346688999999999 79999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.++||||+++|+|.++++.... ..+++.++..++.|++.|++||| +.+++|+||||+||+++.++.++++|||.+
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~--~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRE--SFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCccc
Confidence 9999999999999999976432 23789999999999999999999 889999999999999999999999999999
Q ss_pred ccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 830 RLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 830 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
+........ ......++..|+|||.+.+..++.++||||+||++||+++ |..||...... .........+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~-------~~~~~~~~~~~ 261 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD-------SKFYKLIKEGY 261 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch-------HHHHHHHHcCC
Confidence 765432211 1122345678999999988889999999999999999998 99998643221 11111121111
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
. +. ........+.+++.+||+++|++||++.|+++.|+++
T Consensus 262 ~-----~~----~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 262 R-----MA----QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred c-----CC----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0 00 0111234688999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=322.18 Aligned_cols=242 Identities=32% Similarity=0.447 Sum_probs=198.7
Q ss_pred CCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 683 KTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
-.+.||.|+||.||.|++. +.+.||||++.-. ....+.++.+|+..+++++|||.+.+-|+|..+...|+|||||-
T Consensus 30 dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl 109 (948)
T KOG0577|consen 30 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL 109 (948)
T ss_pred HHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh
Confidence 3566999999999999975 6788999998643 23346778999999999999999999999999999999999995
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
|+-.|.+.-.. .++-+.++..|..+.+.||+||| +.+.||||||+.|||+++.|.|||+|||.|....+
T Consensus 110 -GSAsDlleVhk---KplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P---- 178 (948)
T KOG0577|consen 110 -GSASDLLEVHK---KPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP---- 178 (948)
T ss_pred -ccHHHHHHHHh---ccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCc----
Confidence 48888887655 46778899999999999999999 89999999999999999999999999999976543
Q ss_pred ccccccccccccCCCcC---CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 839 VSTDIAGTFGYIPPEYG---QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
...++|||+|||||++ ..+.|+-++||||+|++..|+.-+++|.... +.++. ...+.... .|.
T Consensus 179 -AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM-------NAMSA-LYHIAQNe-----sPt 244 (948)
T KOG0577|consen 179 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-------NAMSA-LYHIAQNE-----SPT 244 (948)
T ss_pred -hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc-------hHHHH-HHHHHhcC-----CCC
Confidence 3567999999999975 4567999999999999999999999997542 11221 22232221 233
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ..++...|..++..|+++-|.+|||.++++++
T Consensus 245 Lq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 245 LQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred CC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 32 34566677778888999999999999999875
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=332.98 Aligned_cols=260 Identities=25% Similarity=0.400 Sum_probs=203.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCC-CCceeccccceecCCce
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 750 (959)
++|.+.++||+|+||.||+|++. .+..||+|++.... ......+.+|++++.++. ||||+++++++...+..
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~ 116 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI 116 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence 45777899999999999999853 34679999997543 223446889999999997 99999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcC-----------------------------------------------------------
Q 002155 751 LLVYEYMVNGSLDLWLRNRTG----------------------------------------------------------- 771 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~----------------------------------------------------------- 771 (959)
++||||+++|+|.++++....
T Consensus 117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK 196 (401)
T ss_pred EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence 999999999999999975421
Q ss_pred -----------------------------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC
Q 002155 772 -----------------------------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN 816 (959)
Q Consensus 772 -----------------------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 816 (959)
....+++..++.++.|++.|++||| +.+++||||||+||+++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~NiLl~ 273 (401)
T cd05107 197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARNVLIC 273 (401)
T ss_pred hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcceEEEe
Confidence 1124677888999999999999999 89999999999999999
Q ss_pred CCCcEEEcccccccccccccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCc
Q 002155 817 EEFEAKVADFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGN 894 (959)
Q Consensus 817 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~ 894 (959)
+++.+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......
T Consensus 274 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~----- 348 (401)
T cd05107 274 EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN----- 348 (401)
T ss_pred CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch-----
Confidence 999999999999976532211 11223356788999999988889999999999999999998 88887542111
Q ss_pred hHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 895 LVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
......+..+. .+. .+......+.+++.+||..+|++||+++||++.|+++.
T Consensus 349 --~~~~~~~~~~~-----~~~----~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 349 --EQFYNAIKRGY-----RMA----KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred --HHHHHHHHcCC-----CCC----CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 11112222211 111 11123356888999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=316.97 Aligned_cols=251 Identities=25% Similarity=0.398 Sum_probs=198.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|++.++||+|+||.||+|.+. +++.||+|++... .......+.+|++++++++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 36788899999999999999864 6889999988654 233345688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
++++++..+. .+++..+..++.|++.|++||| +.|++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~- 148 (279)
T cd06619 81 MDGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS- 148 (279)
T ss_pred CCCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc-
Confidence 9999996542 3577888999999999999999 899999999999999999999999999999765322
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
......++..|+|||++.+..++.++||||+|+++|+|++|+.||................ ....... .+..
T Consensus 149 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~ 220 (279)
T cd06619 149 --IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLL-QCIVDED-----PPVL 220 (279)
T ss_pred --cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHH-HHHhccC-----CCCC
Confidence 2233568899999999998899999999999999999999999996533222111111111 1111110 0110
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+ .......+.+++.+||+.||++||+++|++++
T Consensus 221 -~--~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 221 -P--VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred -C--CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0 11123457889999999999999999999875
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=320.71 Aligned_cols=257 Identities=28% Similarity=0.463 Sum_probs=203.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.+|...++||+|+||.||+|... ++..+|+|.+..........+.+|+++++.++||||+++++++..++..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 45777899999999999999642 356899999887666667789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCC-----------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcE
Q 002155 753 VYEYMVNGSLDLWLRNRTGS-----------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEA 821 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 821 (959)
||||+++++|.++++..... ...+++.++..++.|++.|++||| +.|++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCCE
Confidence 99999999999999764321 134788999999999999999999 8999999999999999999999
Q ss_pred EEcccccccccccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHH
Q 002155 822 KVADFGLARLISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWV 899 (959)
Q Consensus 822 kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 899 (959)
||+|||++.......... .....+++.|+|||...+..++.++|||||||++|||++ |.+||...... ..
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~---- 233 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT----EA---- 233 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH----HH----
Confidence 999999987553222111 122235678999999988899999999999999999998 88887542111 11
Q ss_pred HHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 900 FQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
......+... ..+ ..+...+.+++.+||+.||++||++.|+.+.|++
T Consensus 234 ~~~~~~~~~~--~~~-------~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 234 IECITQGREL--ERP-------RTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHHHcCccC--CCC-------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 1111111110 011 1223457889999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=318.39 Aligned_cols=246 Identities=24% Similarity=0.321 Sum_probs=191.9
Q ss_pred eccCCCeEEEEEEcC-CCCEEEEEEccccch---hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCH
Q 002155 687 IGDGGFGTVYKAALP-DGKTVAVKKLSQAKT---QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 687 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
||+|+||.||+++.+ +|+.||+|++..... .....+..|++++++++||||+++++++..+.+.++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999865 589999999864321 1233456799999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccccc
Q 002155 763 DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD 842 (959)
Q Consensus 763 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 842 (959)
.+++.... ...+++..+..++.|++.|++||| +.|++||||||+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~ 153 (277)
T cd05607 81 KYHIYNVG--ERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQ 153 (277)
T ss_pred HHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeec
Confidence 98886543 234788999999999999999999 8999999999999999999999999999987654321 2223
Q ss_pred ccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCH
Q 002155 843 IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSK 922 (959)
Q Consensus 843 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (959)
..|+..|+|||++.+..++.++||||+||++|||++|+.||........ ... +........ .. ....
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~---~~~-~~~~~~~~~----~~-----~~~~ 220 (277)
T cd05607 154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA---KEE-LKRRTLEDE----VK-----FEHQ 220 (277)
T ss_pred cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh---HHH-HHHHhhccc----cc-----cccc
Confidence 4688999999999888899999999999999999999999864322111 111 111111111 00 0011
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 923 PMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 923 ~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.....+.+++.+||+.||++||+++|+++.
T Consensus 221 ~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 221 NFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred cCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 234467889999999999999999766543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=314.64 Aligned_cols=251 Identities=31% Similarity=0.465 Sum_probs=205.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.+++.++|+||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 357888999999999999999875 78999999976544 4567889999999999999999999999889999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.++++.... ..+++..+..++.|++.|+.||| +.|++||||||+||+++.++.++|+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~ 157 (256)
T cd05039 83 AKGSLVDYLRSRGR--AVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD 157 (256)
T ss_pred CCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccccc
Confidence 99999999976542 35889999999999999999999 89999999999999999999999999999976632111
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
....+..|+|||.+....++.++||||+|+++||+++ |..||..... ..+.......... .
T Consensus 158 ----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~-----~- 219 (256)
T cd05039 158 ----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--------KDVVPHVEKGYRM-----E- 219 (256)
T ss_pred ----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHhcCCCC-----C-
Confidence 2234568999999988889999999999999999998 9999854311 1122222221111 0
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
........+.+++.+||..+|++||++.|++++|+++
T Consensus 220 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 220 ---APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ---CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 1112345688999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=352.47 Aligned_cols=473 Identities=30% Similarity=0.350 Sum_probs=307.9
Q ss_pred CcCccccCccchhhhhhcCCcccCCCccc-CCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCC
Q 002155 10 SLPEELSDLPILTFAAEKNQLSGSLPSWL-GNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCT 88 (959)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~ 88 (959)
.||+.+-.-.+++.+..+.|+.-..|=.| ..--+|++||+++|++. ..|..+..+.+|+.|.++.|.|. ..|.+...
T Consensus 12 ~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~ 89 (1081)
T KOG0618|consen 12 LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSN 89 (1081)
T ss_pred ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhh
Confidence 55555555555555555555554444111 11112555666655554 55555555566666666666655 45555555
Q ss_pred CCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEc
Q 002155 89 SESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSA 168 (959)
Q Consensus 89 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l 168 (959)
+.+|++|.|.+|++. ..|..+..+.+|++|++++|++. .+|..+..++.++++..
T Consensus 90 ~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~------------------------~~Pl~i~~lt~~~~~~~ 144 (1081)
T KOG0618|consen 90 MRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG------------------------PIPLVIEVLTAEEELAA 144 (1081)
T ss_pred hhcchhheeccchhh-cCchhHHhhhcccccccchhccC------------------------CCchhHHhhhHHHHHhh
Confidence 566666666655555 34555555555555555555554 33444444445555555
Q ss_pred cccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCC
Q 002155 169 ANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGL 248 (959)
Q Consensus 169 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 248 (959)
++|.....++ ... ++.++|..|.+.+.++.++..++. .|||++|.+. . -.+..+.+|+.|....|++...
T Consensus 145 s~N~~~~~lg----~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~--~dls~~~~l~~l~c~rn~ls~l 214 (1081)
T KOG0618|consen 145 SNNEKIQRLG----QTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-V--LDLSNLANLEVLHCERNQLSEL 214 (1081)
T ss_pred hcchhhhhhc----ccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh-h--hhhhhccchhhhhhhhcccceE
Confidence 5551111111 111 666666666666666666666655 6667766665 2 2355566666676766666533
Q ss_pred CchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCc
Q 002155 249 IPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNM 328 (959)
Q Consensus 249 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~ 328 (959)
. -.-++|+.|+.++|.+....+ ...-.+++++|+++|+++ .+|++++.+.+|+.+...+|+
T Consensus 215 ~----~~g~~l~~L~a~~n~l~~~~~--------------~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~ 275 (1081)
T KOG0618|consen 215 E----ISGPSLTALYADHNPLTTLDV--------------HPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNR 275 (1081)
T ss_pred E----ecCcchheeeeccCcceeecc--------------ccccccceeeecchhhhh-cchHHHHhcccceEecccchh
Confidence 1 234566677777766652111 111235566777777776 456888888888888888888
Q ss_pred CcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccc-cccCCC-CcEEEccCCcCCCCCC
Q 002155 329 LSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWS-LGSLGG-LVKLNLTGNKLSGKVP 406 (959)
Q Consensus 329 i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~-L~~L~L~~N~i~~~~~ 406 (959)
++ ..|..+...++|+.|++.+|++. -+|....++..|+.|+|..|+|. ..|+. +..+.. |..|..+.|++.....
T Consensus 276 l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~ 352 (1081)
T KOG0618|consen 276 LV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPS 352 (1081)
T ss_pred HH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhcccccccc
Confidence 85 67777888888888888888888 45667777888888888888888 44443 333333 6777888888874332
Q ss_pred CccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCc
Q 002155 407 TSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNL 486 (959)
Q Consensus 407 ~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l 486 (959)
-.=..++.|+.|.+.+|.+++..-..+.++++|+.|+|++|+|..+|+..+..+. .|+.|+||+|.++ .+|..+.++
T Consensus 353 ~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle--~LeeL~LSGNkL~-~Lp~tva~~ 429 (1081)
T KOG0618|consen 353 YEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLE--ELEELNLSGNKLT-TLPDTVANL 429 (1081)
T ss_pred ccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchH--HhHHHhcccchhh-hhhHHHHhh
Confidence 2222356688888888888887777888888888888888888888887776655 7888888888888 577888888
Q ss_pred cccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCc
Q 002155 487 SYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENR 546 (959)
Q Consensus 487 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 546 (959)
..|++|...+|++. ..| .+..+++|+.+|+|.|+|+...-.....-++|++|||+||.
T Consensus 430 ~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 430 GRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred hhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 88888888888887 677 78888888888888888875443333333788888888887
|
|
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=324.98 Aligned_cols=241 Identities=26% Similarity=0.364 Sum_probs=190.4
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhc-CCCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGK-VKHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
+.||+|+||.||+|++. +++.||||+++... ......+..|..+++. .+||||+++++++.+++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999875 57899999987542 2233445667777775 4899999999999999999999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
|+|.+++.... .+++.++..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 g~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 152 (316)
T cd05619 81 GDLMFHIQSCH----KFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG-DAK 152 (316)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC-CCc
Confidence 99999997643 4788899999999999999999 899999999999999999999999999998753221 112
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (959)
.....||+.|+|||++.+..++.++||||+||++|||++|..||..... ....+.+.... +..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--------~~~~~~i~~~~------~~~--- 215 (316)
T cd05619 153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE--------EELFQSIRMDN------PCY--- 215 (316)
T ss_pred eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCC------CCC---
Confidence 2345689999999999988999999999999999999999999864311 11122222111 111
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 002155 920 DSKPMMLKMLRIAGDCLSDNPAMRPTML-HVLK 951 (959)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rps~~-ell~ 951 (959)
+......+.+++.+||+.||++||++. ++.+
T Consensus 216 -~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 216 -PRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred -CccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 111234577899999999999999997 5543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=321.17 Aligned_cols=265 Identities=24% Similarity=0.378 Sum_probs=201.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC---------------CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD---------------GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLL 741 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~ 741 (959)
.++|++.++||+|+||.||+|...+ ...||+|.++... ......+.+|++++++++|||+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3578899999999999999987532 2358999987542 33345688999999999999999999
Q ss_pred cceecCCceEEEEEeccCCCHHHHHhhhcC--------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCE
Q 002155 742 GYCSFDEEKLLVYEYMVNGSLDLWLRNRTG--------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNI 813 (959)
Q Consensus 742 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 813 (959)
+++..+...++||||+++++|.+++..... ....+++..++.++.|++.|++||| +.|++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChhhE
Confidence 999999999999999999999999965321 1123678899999999999999999 89999999999999
Q ss_pred EECCCCcEEEcccccccccccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh--CCCCCCCCCccc
Q 002155 814 LLNEEFEAKVADFGLARLISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT--GKEPTGPEFKDI 890 (959)
Q Consensus 814 ll~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt--g~~p~~~~~~~~ 890 (959)
++++++.+||+|||++.......... .....++..|+|||...++.++.++|||||||++|||++ |..||.....
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~-- 238 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD-- 238 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh--
Confidence 99999999999999997653222111 122345678999999888889999999999999999998 5567653211
Q ss_pred cCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 891 EGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
......+.+.......... ..........+.+++.+||+.||++||++.+|++.|++
T Consensus 239 --~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 239 --EQVIENTGEFFRNQGRQIY------LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred --HHHHHHHHHhhhhcccccc------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 1111111111111100000 00111123478999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=314.51 Aligned_cols=250 Identities=28% Similarity=0.444 Sum_probs=203.9
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+|++.+.||+|+||.||+|..+ +++.||+|.+... .......+.+|+++++.++|||++++++++..++..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4777889999999999999875 6889999987643 344556788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|.++++... ...+++..++.++.|++.|+.||| +.|++||||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~--~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 81 AENGDLHKLLKMQR--GRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred CCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 99999999998753 235888999999999999999999 8999999999999999999999999999987654322
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
. ......+++.|+|||+..+..++.++||||||+++|||++|+.||..... .........+.. +
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~-----~-- 219 (256)
T cd08529 156 N-FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--------GALILKIIRGVF-----P-- 219 (256)
T ss_pred c-hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCC-----C--
Confidence 2 12234678899999999988899999999999999999999999865321 111122221111 1
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.........+.+++.+||+.+|++||++.+++++
T Consensus 220 --~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 220 --PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred --CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1111344568899999999999999999999874
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=323.60 Aligned_cols=260 Identities=30% Similarity=0.464 Sum_probs=205.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC--------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP--------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFD 747 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 747 (959)
.++|++.+.||+|+||.||+|++. ++..||+|.+.... .....++.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 456888999999999999999741 34579999886542 34456788999999999 899999999999999
Q ss_pred CceEEEEEeccCCCHHHHHhhhcCC------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTGS------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL 815 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 815 (959)
...++||||+++|+|.+++...... ...+++.++..++.|+++|++||| +.|++||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEEE
Confidence 9999999999999999999864321 235788899999999999999999 8899999999999999
Q ss_pred CCCCcEEEcccccccccccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCC
Q 002155 816 NEEFEAKVADFGLARLISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGG 893 (959)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 893 (959)
++++.+||+|||.++......... .....+++.|+|||...+..++.++||||||+++||+++ |..||....
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------ 244 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------ 244 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC------
Confidence 999999999999998664322221 122345678999999988889999999999999999998 777774321
Q ss_pred chHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 894 NLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
...+...+....... ....+...+.+++.+||+.+|++||++.|+++.|+++.
T Consensus 245 --~~~~~~~~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 245 --VEELFKLLKEGHRMD---------KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred --HHHHHHHHHcCCcCC---------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 111222222221110 11223456888999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=317.37 Aligned_cols=256 Identities=27% Similarity=0.476 Sum_probs=203.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CC---CEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DG---KTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.++|+..+.||+|+||.||+|+.+ ++ ..+|+|.+.... ....+.+..|++++++++|||++++++++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 356888899999999999999875 23 379999886542 3345678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++++|.+++.... ..+++.++..++.|++.|++||| +.|++||||||+||++++++.+|++|||++...
T Consensus 84 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 84 ITEYMENGALDKYLRDHD---GEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceec
Confidence 999999999999997643 35788999999999999999999 889999999999999999999999999999765
Q ss_pred ccccccccc--cccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 833 SACETHVST--DIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 833 ~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
......... ....+..|+|||++....++.++|||||||++||+++ |..||..... .. ....+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~----~~----~~~~i~~~~~- 228 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN----HE----VMKAINDGFR- 228 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH----HH----HHHHHhcCCC-
Confidence 432221111 1123457999999988889999999999999999998 9999854211 11 1222221110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
. +...+....+.+++.+||..+|++||++.++++.|+++
T Consensus 229 ---~-----~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 229 ---L-----PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ---C-----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 11122345678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=320.12 Aligned_cols=259 Identities=29% Similarity=0.420 Sum_probs=201.9
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcCC------CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALPD------GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
.+++|.+.+.||+|+||.||+|.+.+ +..||+|.+.... ......+..|+.+++.++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 35678899999999999999998753 5678999886443 3334568899999999999999999999988899
Q ss_pred eEEEEEeccCCCHHHHHhhhcC---CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC---cEEE
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTG---SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF---EAKV 823 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl 823 (959)
.++||||+++++|.+++..... ....+++..+..++.||+.|++||| +.+++||||||+||+++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEe
Confidence 9999999999999999976542 1235889999999999999999999 88999999999999998654 6999
Q ss_pred cccccccccccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHH
Q 002155 824 ADFGLARLISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
+|||+++......... ......+..|+|||++.+..++.++|||||||++|||++ |..||...... .. ..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~----~~----~~ 232 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ----EV----ME 232 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH----HH----HH
Confidence 9999997653221111 112233568999999988899999999999999999997 88998643211 11 11
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
.+...... . .+......+.+++.+||+.+|++||++.+++++|++
T Consensus 233 ~~~~~~~~-----~----~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 233 FVTGGGRL-----D----PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred HHHcCCcC-----C----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 11111100 0 011223568899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=317.09 Aligned_cols=258 Identities=23% Similarity=0.363 Sum_probs=203.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC----CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD----GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.++|.+.++||+|+||.||+|.+.+ ...||+|...... ....+.+.+|+.++++++||||+++++++.. ...++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 3467788999999999999998643 2468999886544 3445678899999999999999999998864 56789
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.... ..+++.+++.++.|++.|++|+| +.+++||||||+||+++.++.++++|||.++..
T Consensus 84 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 84 VMELAPLGELRSYLQVNK---YSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEEcCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeec
Confidence 999999999999997643 24789999999999999999999 899999999999999999999999999999765
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
............++..|+|||.+....++.++||||||+++||+++ |..||...... ... ..+..+...
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~----~~~----~~~~~~~~~-- 227 (270)
T cd05056 158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN----DVI----GRIENGERL-- 227 (270)
T ss_pred ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH----HHH----HHHHcCCcC--
Confidence 4332222222334568999999888889999999999999999996 99998643211 111 112221111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcC
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 959 (959)
.. .......+.+++.+|+..+|++|||+.++++.|++++.|
T Consensus 228 ---~~----~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 ---PM----PPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ---CC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11 112234688899999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=315.19 Aligned_cols=251 Identities=24% Similarity=0.373 Sum_probs=200.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-----hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-----TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
++|+..+.||+|++|.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++..++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 56889999999999999999864 68999999876432 1223567889999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++++|.+++.... .+++..+..++.|++.|+.||| +.|++||||+|+||++++++.++|+|||.++..
T Consensus 82 v~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG----ALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred EEEECCCCcHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 999999999999987653 4788899999999999999999 899999999999999999999999999999765
Q ss_pred cccccccc--ccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 833 SACETHVS--TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 833 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
........ ....++..|+|||...+..++.++||||+|+++||+++|+.||.... .............
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------~~~~~~~~~~~~~--- 224 (263)
T cd06625 155 QTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFE-------AMAAIFKIATQPT--- 224 (263)
T ss_pred cccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccc-------hHHHHHHHhccCC---
Confidence 43211111 23457889999999998889999999999999999999999985421 1111111111110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+. .+......+.+++.+||..+|++||++.+++++
T Consensus 225 --~~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 225 --NPQ----LPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred --CCC----CCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 011 112234467889999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=320.71 Aligned_cols=263 Identities=25% Similarity=0.419 Sum_probs=202.8
Q ss_pred cCCCCCCeeccCCCeEEEEEEc-----CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecC--Cce
Q 002155 679 NNFCKTNIIGDGGFGTVYKAAL-----PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD--EEK 750 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 750 (959)
..|++.+.||+|+||.||.|++ .++..||+|.+.... ......+.+|+++++.++|||++++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3467889999999999999974 357889999987543 33346788999999999999999999988765 567
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++++|.+++.... ..+++.++..++.|++.|++|+| +.|++||||||+||+++.++.++|+|||+++
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK---NKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCcccc
Confidence 89999999999999997543 25789999999999999999999 8999999999999999999999999999997
Q ss_pred cccccccc--ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc-------cCCchHHHHHH
Q 002155 831 LISACETH--VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI-------EGGNLVGWVFQ 901 (959)
Q Consensus 831 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~-------~~~~~~~~~~~ 901 (959)
........ ......++..|+|||+..+..++.++||||||+++||+++++.|+....... ...........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 65432211 1123456778999999888889999999999999999999887653322110 00001111111
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
.+..+.. .+....+...+.+++.+||+.||++||++.++++.++++
T Consensus 238 ~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 VLEEGKR---------LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHcCcc---------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1111110 011122445788999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=324.76 Aligned_cols=259 Identities=31% Similarity=0.461 Sum_probs=204.1
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC--------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecCC
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP--------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDE 748 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 748 (959)
++|.+.+.||+|+||.||+|++. ++..+|+|.+.... .....++..|+.+++.+ +||||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 56889999999999999999752 23579999987542 33455688899999999 7999999999999999
Q ss_pred ceEEEEEeccCCCHHHHHhhhcC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTG------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN 816 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 816 (959)
..++||||+++|+|.+++..... ....+++.++..++.|++.|++||| +.|++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheEEc
Confidence 99999999999999999976432 1235788999999999999999999 88999999999999999
Q ss_pred CCCcEEEcccccccccccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCc
Q 002155 817 EEFEAKVADFGLARLISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGN 894 (959)
Q Consensus 817 ~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~ 894 (959)
.++.+||+|||.++......... .....++..|+|||.+.+..++.++||||+||++|||++ |..||....
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~------- 247 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------- 247 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC-------
Confidence 99999999999987653221111 111234568999999988889999999999999999998 788874321
Q ss_pred hHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 895 LVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
...+...+...... ..+......+.+++.+||..+|++||++.++++.|+++.
T Consensus 248 -~~~~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 248 -VEELFKLLKEGHRM---------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred -HHHHHHHHHcCCCC---------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 11122222222111 111223457788999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=314.31 Aligned_cols=247 Identities=23% Similarity=0.402 Sum_probs=194.6
Q ss_pred eccCCCeEEEEEEcC---CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCH
Q 002155 687 IGDGGFGTVYKAALP---DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 687 lg~G~~g~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
||+|+||.||+|.+. ++..||+|++.... ....+.+.+|+.++++++||||+++++++. .+..++||||+++++|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L 81 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPL 81 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCH
Confidence 899999999999764 35579999987543 333466889999999999999999999875 4578999999999999
Q ss_pred HHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccc--
Q 002155 763 DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS-- 840 (959)
Q Consensus 763 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~-- 840 (959)
.+++.... ..+++.+++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+...........
T Consensus 82 ~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05115 82 NKFLSGKK---DEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR 155 (257)
T ss_pred HHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence 99997543 35789999999999999999999 88999999999999999999999999999976543222111
Q ss_pred ccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCC
Q 002155 841 TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919 (959)
Q Consensus 841 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (959)
....++..|+|||.+....++.++||||||+++||+++ |..||..... .. +...+..+....
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~----~~~~~~~~~~~~--------- 218 (257)
T cd05115 156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG----PE----VMSFIEQGKRLD--------- 218 (257)
T ss_pred CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH----HH----HHHHHHCCCCCC---------
Confidence 11223578999999888889999999999999999996 9999864321 11 112222211100
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 920 DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+......+.+++.+||..||++||++.+|.+.|+.+.
T Consensus 219 ~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05115 219 CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256 (257)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence 11123456778999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-36 Score=322.82 Aligned_cols=256 Identities=23% Similarity=0.377 Sum_probs=201.2
Q ss_pred CCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccchh-hHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAKTQ-GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
+|++.+.||+|+||.||+|++. +++.||+|++...... ..+.+.+|+.+++.++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4566788999999999999863 2578999998754332 34568899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc
Q 002155 753 VYEYMVNGSLDLWLRNRTG------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE 820 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 820 (959)
++||+++++|.+++..... ....+++..+..++.|++.|++|+| +.|++||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCCc
Confidence 9999999999999864221 1234788889999999999999999 899999999999999999999
Q ss_pred EEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHH
Q 002155 821 AKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGW 898 (959)
Q Consensus 821 ~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 898 (959)
+||+|||+++........ ......+++.|+|||.+.+..++.++||||+||++|||++ |..||..... ..
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~~ 234 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--------QD 234 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--------HH
Confidence 999999998765332211 1122345779999999888889999999999999999998 7778754211 11
Q ss_pred HHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 899 VFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
+...+...... ....++...+.+++.+||+.+|++||++++|++.|+.
T Consensus 235 ~~~~i~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 235 VIEMIRNRQVL---------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHcCCcC---------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 22222222211 1112344567889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=316.79 Aligned_cols=255 Identities=26% Similarity=0.437 Sum_probs=203.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.+|++.+.||+|+||.||+|.+. .+..+|+|.+.... ....+.+..|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46888999999999999999864 23479999886543 33456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.... ..+++.+++.++.|++.|++||| +.+++||||||+||+++.++.++++|||.+....
T Consensus 84 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 84 TEYMENGSLDAFLRKHD---GQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 99999999999997653 35788999999999999999999 8999999999999999999999999999998664
Q ss_pred cccccccc--cccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 834 ACETHVST--DIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 834 ~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
........ ...++..|+|||.+.+..++.++||||||+++||+++ |..||..... ... ...+....
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~----~~~----~~~~~~~~--- 226 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN----QDV----IKAIEEGY--- 226 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH----HHH----HHHHhCCC---
Confidence 32222111 1223568999999998889999999999999999887 9999854211 111 11122111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
.+.. .......+.+++.+||+.+|++||++.++++.|+++
T Consensus 227 --~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 227 --RLPA----PMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred --cCCC----CCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0111 112334678899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=319.10 Aligned_cols=257 Identities=26% Similarity=0.416 Sum_probs=201.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCC----EEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGK----TVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
.++|++.++||+|+||.||+|++. +|+ .||+|++.... ......+.+|+.+++.++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 457888999999999999999853 444 48999886543 3345668889999999999999999998865 4578
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
++|||+++|+|.++++... ..+++.+++.++.|++.|++||| +.+++||||||+||++++++.+||+|||+++.
T Consensus 85 l~~~~~~~g~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENK---DRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred EEEEcCCCCCHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceee
Confidence 9999999999999997643 35788999999999999999999 89999999999999999999999999999986
Q ss_pred cccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 832 ISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 832 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
........ .....+++.|+|||...+..++.++|||||||++||+++ |..||..... .... ..+......
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----~~~~----~~~~~~~~~ 230 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA----REIP----DLLEKGERL 230 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH----HHHH----HHHHCCCcC
Confidence 64322211 112234678999999988889999999999999999998 8888754211 1111 112211110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.. .......+.+++.+||+.||++||++.++++.++++..
T Consensus 231 -----~~----~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 231 -----PQ----PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred -----CC----CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 00 11233467889999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=325.83 Aligned_cols=241 Identities=26% Similarity=0.319 Sum_probs=191.9
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 754 (959)
+|++.+.||+|+||.||+|+.. +++.||+|++.... ......+..|..++... +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788899999999999999876 57899999987532 22234456677777777 5889999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... .+++.++..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 81 EYVNGGDLMYQIQQVG----RFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred cCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 9999999999987643 4788999999999999999999 89999999999999999999999999999875432
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+..... .
T Consensus 154 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--------~~~~~i~~~~~---~-- 219 (323)
T cd05616 154 D-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIMEHNV---A-- 219 (323)
T ss_pred C-CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCC---C--
Confidence 1 11223457899999999999999999999999999999999999998643211 11122221111 0
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM 946 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 946 (959)
.+......+.+++.+|++.||++|+++
T Consensus 220 -----~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 220 -----YPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred -----CCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 011233467889999999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=332.82 Aligned_cols=262 Identities=21% Similarity=0.250 Sum_probs=197.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
...|.+.+.||+|+||.||+|.+. .++.||||.... ..+.+|++++++++|||||++++++..++..++||||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 457999999999999999999876 578899996432 2356899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+. ++|.+++.... ..+++.++..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 242 ~~-~~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~ 314 (461)
T PHA03211 242 YR-SDLYTYLGARL---RPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSW 314 (461)
T ss_pred cC-CCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceeccccc
Confidence 95 68888886543 35899999999999999999999 8999999999999999999999999999997654321
Q ss_pred cc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc-c---
Q 002155 837 TH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD-V--- 911 (959)
Q Consensus 837 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--- 911 (959)
.. ......||..|+|||++.+..++.++|||||||++|||++|..|+...............+.+.+....... .
T Consensus 315 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 394 (461)
T PHA03211 315 STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQ 394 (461)
T ss_pred ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCC
Confidence 11 122356899999999999999999999999999999999988765433222111112222222222111100 0
Q ss_pred -----------------cCccccCCCCH---HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 -----------------LDPTVLTADSK---PMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 -----------------~~~~~~~~~~~---~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..+........ .....+.+++.+||+.||++|||+.|++++
T Consensus 395 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 395 HAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred CcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00000000000 122357789999999999999999999975
|
|
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=327.31 Aligned_cols=255 Identities=25% Similarity=0.278 Sum_probs=195.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|+.++..++||+|+++++++..++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47889999999999999999865 5889999998642 2233455788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... ..+++..+..++.||+.|++||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 81 DYYVGGDLLTLLSKFE---DRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred ecCCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 9999999999997643 34788999999999999999999 89999999999999999999999999999876543
Q ss_pred ccccccccccccccccCCCcCCC-----CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQS-----GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
..........||+.|+|||++.. ..++.++||||+||++|||++|+.||..... ..............
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~-------~~~~~~i~~~~~~~ 227 (331)
T cd05597 155 DGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-------VETYGKIMNHKEHF 227 (331)
T ss_pred CCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH-------HHHHHHHHcCCCcc
Confidence 33222233468999999998763 4578899999999999999999999864311 11111111111100
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCC--CCCCCCHHHHHHH
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDN--PAMRPTMLHVLKF 952 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~d--P~~Rps~~ell~~ 952 (959)
. . + .........+.+++.+|+..+ +..||++++++.+
T Consensus 228 ~-~-~----~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 228 Q-F-P----PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred c-C-C----CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 0 0 1 111113345667777766543 3448899998875
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=319.82 Aligned_cols=260 Identities=26% Similarity=0.423 Sum_probs=202.4
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
..++|++.++||+|+||.||+|..+ .+..||+|.+.... ......+.+|+.+++.++||||+++++++...+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3568999999999999999999753 24579999886443 2233457789999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCC------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEE
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGS------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 823 (959)
.++||||+++|+|.++++..... .....+..+..++.|++.|+.||| +++++||||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEEE
Confidence 99999999999999999764321 223467788899999999999999 899999999999999999999999
Q ss_pred cccccccccccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHH
Q 002155 824 ADFGLARLISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
+|||+++......... .....++..|+|||.+.++.++.++|||||||++|||++ |..||...... . +..
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~----~----~~~ 232 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE----Q----VLK 232 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH----H----HHH
Confidence 9999987653322111 112234678999999988889999999999999999999 78887542111 1 111
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
.+..+... . ........+.+++.+|++.||++||++.++++.+++.
T Consensus 233 ~~~~~~~~-----~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 233 FVMDGGYL-----D----QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHHcCCCC-----C----CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 11111110 0 0112235788999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=324.55 Aligned_cols=242 Identities=26% Similarity=0.335 Sum_probs=193.8
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
+.||+|+||.||+|+++ +++.||+|++.... ......+..|..+++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999876 57899999987542 23345567788888877 699999999999999999999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
|+|.+++.... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~ 152 (318)
T cd05570 81 GDLMFHIQRSG----RFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG-GVT 152 (318)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC-CCc
Confidence 99999887653 5889999999999999999999 899999999999999999999999999998653221 112
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (959)
.....|++.|+|||++.+..++.++||||+||++|||++|+.||..... ..+...+..... ..
T Consensus 153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~--------~~~~~~i~~~~~---~~------ 215 (318)
T cd05570 153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE--------DELFQSILEDEV---RY------ 215 (318)
T ss_pred ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH--------HHHHHHHHcCCC---CC------
Confidence 2334689999999999999999999999999999999999999864321 111222221111 00
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHH
Q 002155 920 DSKPMMLKMLRIAGDCLSDNPAMRPTM-----LHVLKF 952 (959)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rps~-----~ell~~ 952 (959)
+......+.+++.+||+.||++||++ .+++++
T Consensus 216 -~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 216 -PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred -CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 11233467889999999999999999 887654
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=321.39 Aligned_cols=249 Identities=27% Similarity=0.424 Sum_probs=203.4
Q ss_pred CCCCeeccCCCeEEEEEEcCC-CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCC
Q 002155 682 CKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNG 760 (959)
Q Consensus 682 ~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 760 (959)
+++..||.|+||.||+|..++ +-..|.|++........++|.-|+++++.++||+||++++.|..++..|+..|||.||
T Consensus 35 eIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GG 114 (1187)
T KOG0579|consen 35 EIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGG 114 (1187)
T ss_pred HHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCc
Confidence 345569999999999998765 4455678887777778889999999999999999999999999999999999999999
Q ss_pred CHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccc
Q 002155 761 SLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS 840 (959)
Q Consensus 761 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 840 (959)
-.+..+-.-. .++.+.++..+++|++.||.||| +..|+|||+|+.|||++-+|.++|+|||++..... .....
T Consensus 115 AVDaimlEL~---r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-t~qkR 187 (1187)
T KOG0579|consen 115 AVDAIMLELG---RVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-TRQKR 187 (1187)
T ss_pred hHhHHHHHhc---cccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccchh-HHhhh
Confidence 9988876544 57899999999999999999999 89999999999999999999999999999865432 33445
Q ss_pred ccccccccccCCCcC-----CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 841 TDIAGTFGYIPPEYG-----QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 841 ~~~~gt~~y~aPE~~-----~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
..+.|||+|||||++ ...+|++++||||||+++.||..+.+|-.. .+.+..+. .+.... .|.
T Consensus 188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe-------lnpMRVll-KiaKSe-----PPT 254 (1187)
T KOG0579|consen 188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE-------LNPMRVLL-KIAKSE-----PPT 254 (1187)
T ss_pred ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc-------cchHHHHH-HHhhcC-----CCc
Confidence 678999999999974 456899999999999999999999999432 12222221 111111 122
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+. .+..+...+.+++..|+.+||+.||++++++++
T Consensus 255 Ll--qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 255 LL--QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred cc--CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 21 245567788899999999999999999999875
|
|
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=324.31 Aligned_cols=243 Identities=22% Similarity=0.324 Sum_probs=192.2
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
++||+|+||+||+|+.. +++.||+|++.... ....+.+..|+.++.++ +||+|+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999865 57899999997542 23345577899998888 699999999999999999999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
|+|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~~~~~~----~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~ 152 (327)
T cd05617 81 GDLMFHMQRQR----KLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP-GDT 152 (327)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC-CCc
Confidence 99998887543 5889999999999999999999 899999999999999999999999999998753221 122
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (959)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .......+..+.+...... .|
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~---~p----- 223 (327)
T cd05617 153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDN-PDMNTEDYLFQVILEKPIR---IP----- 223 (327)
T ss_pred eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCC-cccccHHHHHHHHHhCCCC---CC-----
Confidence 23457899999999999999999999999999999999999999643221 1112223333333222110 11
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCH
Q 002155 920 DSKPMMLKMLRIAGDCLSDNPAMRPTM 946 (959)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rps~ 946 (959)
......+.+++.+|++.||++|+++
T Consensus 224 --~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 224 --RFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred --CCCCHHHHHHHHHHhccCHHHcCCC
Confidence 1123456789999999999999985
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=319.03 Aligned_cols=258 Identities=29% Similarity=0.462 Sum_probs=204.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC------CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD------GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|.+++ +..||+|.+.... ......+.+|+.+++.++||||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 3578889999999999999998642 4689999986443 23345688899999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCC------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGS------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVA 824 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 824 (959)
++||||+++|+|.+++...... ...+++..++.++.|++.|+.||| +.+++||||||+||+++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEEC
Confidence 9999999999999999764322 224688899999999999999999 8999999999999999999999999
Q ss_pred cccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHH
Q 002155 825 DFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 825 Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
|||.++........ ......++..|+|||...+..++.++|||||||++||+++ |..||..... .. ....
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----~~----~~~~ 233 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN----EE----VLKF 233 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH----HH----HHHH
Confidence 99998765432221 1223346789999999888889999999999999999998 8888753211 11 1222
Q ss_pred hhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
........ . +..+...+.+++.+||+.+|++|||+.++++.|++
T Consensus 234 ~~~~~~~~-----~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 234 VIDGGHLD-----L----PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HhcCCCCC-----C----CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 22111111 1 11124578899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=313.82 Aligned_cols=255 Identities=28% Similarity=0.439 Sum_probs=203.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.+.||+|+||.||+|.+.++..+|+|.+.... ...+.+.+|+++++.++|+|++++++++.. ...++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 35788899999999999999998778889999887533 234678889999999999999999998877 7789999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++.... ...+++.++..++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+........
T Consensus 83 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 157 (260)
T cd05073 83 AKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 157 (260)
T ss_pred CCCcHHHHHHhCC--ccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc
Confidence 9999999997643 235788899999999999999999 88999999999999999999999999999976543222
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......++..|+|||++....++.++|+|||||++|++++ |..||..... .. ........... .
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~----~~----~~~~~~~~~~~-----~- 223 (260)
T cd05073 158 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN----PE----VIRALERGYRM-----P- 223 (260)
T ss_pred ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH----HH----HHHHHhCCCCC-----C-
Confidence 22222345678999999988889999999999999999999 8888854211 11 11222221111 0
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
........+.+++.+||+.+|++||++.++.+.|+++
T Consensus 224 ---~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 224 ---RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred ---CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 1122334688999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=324.42 Aligned_cols=262 Identities=23% Similarity=0.348 Sum_probs=197.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch-hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|.+.+.||+|+||.||+|+.+ +++.||+|++..... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56888999999999999999875 578899999864432 2234577899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++ ++.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.......
T Consensus 86 ~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 86 LDK-DLKQYMDDCG---NIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT 158 (309)
T ss_pred CCC-CHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCCc
Confidence 975 8888886643 34788899999999999999999 8999999999999999999999999999987543221
Q ss_pred ccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc-------
Q 002155 837 THVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA------- 908 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------- 908 (959)
.......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||...... +....+.........
T Consensus 159 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07872 159 -KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE----DELHLIFRLLGTPTEETWPGIS 233 (309)
T ss_pred -cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHHhCCCCHHHHhhhc
Confidence 12223467899999998754 46789999999999999999999998653221 111111111000000
Q ss_pred -----ccccCccccC----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 -----ADVLDPTVLT----ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 -----~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.....+...+ .........+.+++.+|++.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 234 SNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred chhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 0000000000 0111234467889999999999999999999873
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-35 Score=318.51 Aligned_cols=265 Identities=23% Similarity=0.394 Sum_probs=203.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC-----------------CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD-----------------GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVP 739 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~ 739 (959)
..+|++.+.||+|+||.||+|...+ +..||+|.+.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578899999999999999987542 2458999987543 334567889999999999999999
Q ss_pred cccceecCCceEEEEEeccCCCHHHHHhhhcCC-------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCC
Q 002155 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGS-------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASN 812 (959)
Q Consensus 740 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~N 812 (959)
+++++..++..++||||+++++|.+++...... ...+++..++.++.|++.|++||| +.|++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccchhc
Confidence 999999999999999999999999999765421 125789999999999999999999 8899999999999
Q ss_pred EEECCCCcEEEcccccccccccccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh--CCCCCCCCCcc
Q 002155 813 ILLNEEFEAKVADFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT--GKEPTGPEFKD 889 (959)
Q Consensus 813 ill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt--g~~p~~~~~~~ 889 (959)
|+++.++.++|+|||+++....... .......++..|+|||...+..++.++|||||||++|||++ |..||....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~-- 238 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT-- 238 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC--
Confidence 9999999999999999876532221 11223345778999999888889999999999999999998 667764321
Q ss_pred ccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 890 IEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
............+....... ..........+.+++.+||+.||++||++.|+++.|++
T Consensus 239 --~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 239 --DQQVIENAGHFFRDDGRQIY------LPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred --hHHHHHHHHhcccccccccc------CCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 11111111111111110000 01111233578899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=324.20 Aligned_cols=196 Identities=31% Similarity=0.362 Sum_probs=169.6
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC-C-----CceeccccceecCCceEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-H-----QNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~~~~~~~~~~~~~l 752 (959)
+|++.++||+|+||.|.+|.+. +++.||||+++.... -..+...|+.++..++ | -|+|+++++|...++.|+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 7899999999999999999865 699999999986433 3455667999999996 4 489999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC--CcEEEccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE--FEAKVADFGLAR 830 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfg~~~ 830 (959)
|+|.++ .+|.++++.... ..++...+..++.||+.||.+|| +.+|||+||||+|||+.+. ..|||+|||.++
T Consensus 266 VfELL~-~NLYellK~n~f--~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 266 VFELLS-TNLYELLKNNKF--RGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSC 339 (586)
T ss_pred eehhhh-hhHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEeccccc
Confidence 999985 499999998664 45889999999999999999999 8999999999999999654 379999999998
Q ss_pred ccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 886 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~ 886 (959)
..... ...+.-+..|+|||++.+.+|+.+.||||||||+.||++|.+-|.++
T Consensus 340 ~~~q~----vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 340 FESQR----VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred ccCCc----ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 75421 12456788999999999999999999999999999999998777554
|
|
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=326.26 Aligned_cols=192 Identities=23% Similarity=0.337 Sum_probs=164.6
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
...+|++.+.||+|+||.||+|+.. +++.||+|+.... ....|+.++++++||||+++++++..+...++|||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 4567999999999999999999876 4678999975432 23468999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+. +++.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||.++.....
T Consensus 138 ~~~-~~l~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 210 (357)
T PHA03209 138 HYS-SDLYTYLTKRS---RPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA 210 (357)
T ss_pred ccC-CcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCccccccccC
Confidence 995 58888886543 35889999999999999999999 889999999999999999999999999998753221
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCC
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPT 883 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~ 883 (959)
.......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 211 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 211 --PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred --cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 1223356899999999999999999999999999999999966554
|
|
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=311.72 Aligned_cols=250 Identities=27% Similarity=0.425 Sum_probs=203.8
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCC-CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
++|+..++||+|+||.||+|+..+ ++.||+|.+..... .+++.+|++++++++|||++++++++..+...+++|||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 578889999999999999999764 78999999875433 567899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.++++... ..+++..+..++.|+++|+.||| +.+++||||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~~L~~~l~~~~---~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (256)
T cd06612 81 GAGSVSDIMKITN---KTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA 154 (256)
T ss_pred CCCcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc
Confidence 9999999997643 45889999999999999999999 88999999999999999999999999999987643221
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......++..|+|||++.+..++.++||||||+++|+|++|+.||....... .. ...... +...
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~-------~~-~~~~~~-------~~~~ 218 (256)
T cd06612 155 -KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR-------AI-FMIPNK-------PPPT 218 (256)
T ss_pred -ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh-------hh-hhhccC-------CCCC
Confidence 2223457889999999988899999999999999999999999986432210 00 000000 0001
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..........+.+++.+||+.||++||+++|++++
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 219 LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 11122344568899999999999999999999863
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=313.98 Aligned_cols=252 Identities=26% Similarity=0.473 Sum_probs=202.1
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
.+|++.+.||+|+||.||+|.+.+++.+|+|.+..... ...++.+|++++++++||+++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 46778899999999999999987788999998864332 24568899999999999999999999998899999999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+++|.++++... ..+++..++.++.|++.|++||| +.+++||||||+||+++.++.++|+|||.+.........
T Consensus 83 ~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 156 (256)
T cd05112 83 HGCLSDYLRAQR---GKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT 156 (256)
T ss_pred CCcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCccc
Confidence 999999997644 24788999999999999999999 889999999999999999999999999998765332211
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......++.+|+|||...++.++.++||||+|+++||+++ |..||...... ...+.+..+. ....+..
T Consensus 157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~--~~~~~~~- 225 (256)
T cd05112 157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--------EVVETINAGF--RLYKPRL- 225 (256)
T ss_pred ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--------HHHHHHhCCC--CCCCCCC-
Confidence 1122335678999999988889999999999999999998 89998543211 1122222211 1111111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 954 (959)
....+.+++.+||+.+|++||++.++++.|.
T Consensus 226 ------~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 226 ------ASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ------CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 2356888999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=319.95 Aligned_cols=258 Identities=31% Similarity=0.495 Sum_probs=203.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|... ++..||+|++.... .....++.+|+.++++++|||++++++++..++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467889999999999999999863 46789999987543 33456688999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcC------------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCC
Q 002155 751 LLVYEYMVNGSLDLWLRNRTG------------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASN 812 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~N 812 (959)
++||||+++|+|.++++.... ....+++.+++.++.|++.|++||| ..+++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHhh
Confidence 999999999999999975321 1124678899999999999999999 8899999999999
Q ss_pred EEECCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccc
Q 002155 813 ILLNEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDI 890 (959)
Q Consensus 813 ill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~ 890 (959)
|++++++.++++|||.+......... .......+..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~- 239 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE- 239 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 99999999999999998755322111 1112234567999999888899999999999999999998 77887532111
Q ss_pred cCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 891 EGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
. ....+..+.... .+......+.+++.+||+.||++||++.|+++.|++
T Consensus 240 ------~-~~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 ------E-VIYYVRDGNVLS---------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ------H-HHHHHhcCCCCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 1 122222221110 111234568889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=317.64 Aligned_cols=252 Identities=26% Similarity=0.350 Sum_probs=198.9
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.|+..++||+|+||.||+|.+. +++.||+|.+.... ......+..|+.++++++|++++++++.+..++..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3677889999999999999875 68899999886432 1223456789999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++..... ..+++.++..++.|++.|+.||| +.+|+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~g~~L~~~l~~~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05630 81 LMNGGDLKFHIYHMGE--AGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 155 (285)
T ss_pred ecCCCcHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence 9999999999865432 35788999999999999999999 899999999999999999999999999998754322
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
. ......|+..|+|||++.+..++.++||||+|+++|||++|+.||........ ............ ..
T Consensus 156 ~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~----~~~~~~~~~~~~------~~ 223 (285)
T cd05630 156 Q--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK----REEVERLVKEVQ------EE 223 (285)
T ss_pred c--cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch----HHHHHhhhhhhh------hh
Confidence 1 12234689999999999988999999999999999999999999975322211 000111111000 00
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPT-----MLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~ell~~ 952 (959)
........+.+++.+||+.||++||| ++|++++
T Consensus 224 ----~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 224 ----YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred ----cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 11123345788999999999999999 8888863
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=315.89 Aligned_cols=255 Identities=25% Similarity=0.455 Sum_probs=201.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCC-C---CEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPD-G---KTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~-~---~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.+|++.+.||+|+||.||+|.++. + ..||||.+... ......++..|+.++++++||||+++++++..+...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 357788999999999999998652 3 36999998754 334456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.++++... ..+++.+++.++.|++.|++||| +.|++||||||+||+++.++.++++|||.+....
T Consensus 84 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 84 TEFMENGALDSFLRQND---GQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EecCCCCcHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccc
Confidence 99999999999997654 24788999999999999999999 8999999999999999999999999999987654
Q ss_pred cccccc--ccccc--ccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 834 ACETHV--STDIA--GTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 834 ~~~~~~--~~~~~--gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
...... ..... .+..|+|||...+..++.++||||+||++||+++ |..||..... ... ...+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~----~~~----~~~i~~~~- 228 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN----QDV----INAIEQDY- 228 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH----HHH----HHHHHcCC-
Confidence 322111 11111 2457999999998899999999999999999987 9999854211 111 12221110
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
.. + ...+++..+.+++.+||+.+|++||++.+++..|+++
T Consensus 229 -~~--~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 -RL--P-----PPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred -cC--C-----CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 0 0122344678899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=308.17 Aligned_cols=247 Identities=23% Similarity=0.312 Sum_probs=204.8
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
-|...+.||+|.|++|-.|++- +|..||||++.+.+ ......+.+|+++|+-++|||||++|.+.......|+|.|.
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 4666788999999999999754 89999999997654 33445688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC-CCCcEEEcccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN-EEFEAKVADFGLARLISAC 835 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~~~~~~~~ 835 (959)
=++|+|.||+-... .-+.+..+.+++.||+.|+.|+| +..+||||+||+||.+- .-|-|||+|||++-.+.+.
T Consensus 99 GD~GDl~DyImKHe---~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHE---EGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred cCCchHHHHHHhhh---ccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 99999999997655 34788999999999999999999 88999999999999775 4589999999999877643
Q ss_pred cccccccccccccccCCCcCCCCCCC-CcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRST-TRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. .-...+|+..|.|||++.+..|+ +++||||+|||+|.+++|++||+...+... ..++ +|
T Consensus 173 ~--kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET--------LTmI--------mD- 233 (864)
T KOG4717|consen 173 K--KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET--------LTMI--------MD- 233 (864)
T ss_pred c--hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh--------hhhh--------hc-
Confidence 2 33557899999999999998885 788999999999999999999986544321 0111 11
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.....+.....+..++|..|+..||.+|.+.+||...
T Consensus 234 -CKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 234 -CKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred -ccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 1122345566778899999999999999999998753
|
|
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=314.20 Aligned_cols=251 Identities=30% Similarity=0.493 Sum_probs=195.7
Q ss_pred CeeccCCCeEEEEEEcCC-CC--EEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALPD-GK--TVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
++||+|+||.||+|++++ +. .+|+|.+.... ....+.+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999998753 43 46888887432 34456788999999999 799999999999999999999999999
Q ss_pred CCHHHHHhhhcC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccc
Q 002155 760 GSLDLWLRNRTG------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFG 827 (959)
Q Consensus 760 g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 827 (959)
|+|.++++.... ....+++.++..++.|++.|++||| +.|++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCC
Confidence 999999976431 1234788999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 828 LARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
++...... ........+..|+|||++....++.++||||||+++|||++ |..||...... . ..+.+...
T Consensus 158 l~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-------~-~~~~~~~~ 227 (270)
T cd05047 158 LSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-------E-LYEKLPQG 227 (270)
T ss_pred Cccccchh--hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-------H-HHHHHhCC
Confidence 98532211 11111223567999999988889999999999999999997 99998542111 1 12222221
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
...+ ........+.+++.+||+.||.+||++.++++.|+++.
T Consensus 228 ~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 228 YRLE---------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCCC---------CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 1110 01123346789999999999999999999999998873
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=325.09 Aligned_cols=261 Identities=31% Similarity=0.466 Sum_probs=200.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc------CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecC-C
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL------PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFD-E 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-~ 748 (959)
.++|++.+.||+|+||.||+|.+ .+++.||||+++... ......+.+|+.++.++ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 35789999999999999999974 246789999987533 23345678899999999 689999999988654 4
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCC--------------------------------------------------------
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGS-------------------------------------------------------- 772 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~-------------------------------------------------------- 772 (959)
..++||||+++|+|.++++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 678999999999999998753210
Q ss_pred -------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc-ccccc
Q 002155 773 -------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV-STDIA 844 (959)
Q Consensus 773 -------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~ 844 (959)
...+++.++..++.|+++|++||| +.||+||||||+||+++.++.+||+|||++.......... .....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 123678888999999999999999 8999999999999999999999999999997653221111 11223
Q ss_pred ccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHH
Q 002155 845 GTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKP 923 (959)
Q Consensus 845 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (959)
++..|+|||...+..++.++||||||+++||+++ |..||...... ......+..+.... .|. .
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-------~~~~~~~~~~~~~~--~~~-------~ 306 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-------EEFCRRLKEGTRMR--APD-------Y 306 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc-------HHHHHHHhccCCCC--CCC-------C
Confidence 5678999999888889999999999999999997 88887542111 11112222211110 011 1
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 924 MMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 924 ~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
....+.+++.+||+.||++||++.|++++|+++.
T Consensus 307 ~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 307 TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1235788999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=318.56 Aligned_cols=250 Identities=24% Similarity=0.388 Sum_probs=202.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
..+|++.+.||+|+||.||+|+.. +++.||+|.+........+.+.+|+.+++.++|||++++++++..++..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 367889999999999999999864 7899999998765555556788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|.+++... .+++.++..++.|++.|+.||| +.|++||||||+||+++.++.++|+|||.+.......
T Consensus 98 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 98 LAGGSLTDVVTET-----CMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred cCCCCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 9999999998653 3688899999999999999999 8899999999999999999999999999987654322
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
. ......+++.|+|||...+..++.++||||+||++|++++|..||........ .......+ .+.
T Consensus 170 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~-------~~~~~~~~------~~~- 234 (297)
T cd06656 170 S-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-------LYLIATNG------TPE- 234 (297)
T ss_pred c-CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh-------eeeeccCC------CCC-
Confidence 1 22334678899999999888899999999999999999999999964322100 00000000 010
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
..........+.+++.+||+.||++||+++++++
T Consensus 235 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 235 -LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred -CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0112223445778999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-35 Score=319.09 Aligned_cols=258 Identities=28% Similarity=0.395 Sum_probs=200.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|++.+.||+|+||.||+|.+. ++..||+|.+... ......++.+|++++++++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 46888999999999999999865 5788999988654 233345688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|.++++... .+++..+..++.|+++|++|||+ ..+++||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 153 (308)
T cd06615 81 MDGGSLDQVLKKAG----RIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 153 (308)
T ss_pred cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCccccccc-
Confidence 99999999997653 57889999999999999999993 258999999999999999999999999998654321
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc-------
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA------- 909 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 909 (959)
......++..|+|||...+..++.++||||||+++|||++|+.||..... .....+...........
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 227 (308)
T cd06615 154 --MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA----KELEAMFGRPVSEGEAKESHRPVS 227 (308)
T ss_pred --ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch----hhHHHhhcCccccccccCCccccc
Confidence 22345688999999998888899999999999999999999999853211 01111110000000000
Q ss_pred --------------------cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 910 --------------------DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 910 --------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
....|.. + .......+.+++.+||..||++||+++|++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 228 GHPPDSPRPMAIFELLDYIVNEPPPKL-P--SGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCCCCccchhhHHHHHHHHhcCCCccC-c--CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000 0 11134568899999999999999999999876
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=315.45 Aligned_cols=253 Identities=26% Similarity=0.357 Sum_probs=199.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
++|++.+.||+|+||.||+|+.. +++.||+|.++.........+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46777889999999999999865 68899999987654445566788999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++.... .+++.++..++.|++.|++||| +.|++|+||||+||+++.++.++|+|||.+...... .
T Consensus 89 ~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~-~ 160 (267)
T cd06645 89 GGGSLQDIYHVTG----PLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT-I 160 (267)
T ss_pred CCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc-c
Confidence 9999999987643 5788999999999999999999 889999999999999999999999999998765422 1
Q ss_pred cccccccccccccCCCcCC---CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 838 HVSTDIAGTFGYIPPEYGQ---SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
.......|+..|+|||++. ...++.++||||+||++|||++|..||....... .+....... ..+
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~-------~~~~~~~~~-----~~~ 228 (267)
T cd06645 161 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR-------ALFLMTKSN-----FQP 228 (267)
T ss_pred cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh-------hHHhhhccC-----CCC
Confidence 2223446899999999864 4567899999999999999999999985432110 011111110 011
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... .........+.+++.+|+..+|++||++++++++
T Consensus 229 ~~~-~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 229 PKL-KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred Ccc-cccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 100 0111233457889999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=311.44 Aligned_cols=248 Identities=28% Similarity=0.461 Sum_probs=196.6
Q ss_pred CeeccCCCeEEEEEEcCC----CCEEEEEEccccch-hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALPD----GKTVAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
++||+|+||.||+|++.. +..||+|.+..... ...+++.+|+++++.++|||++++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 469999999999997532 36899999875443 34567889999999999999999999875 5568999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
|+|.+++.... .+++..+..++.|++.|++||| ..+++||||||+||+++.++.+||+|||.++.........
T Consensus 80 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 80 GPLLKYLKKRR----EIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred CcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 99999998654 5788999999999999999999 8899999999999999999999999999998664332222
Q ss_pred ccc--ccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 840 STD--IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 840 ~~~--~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
... ..++..|+|||...+..++.++||||||+++||+++ |..||..... ... ...+......
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~----~~~----~~~~~~~~~~------- 217 (257)
T cd05060 153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG----AEV----IAMLESGERL------- 217 (257)
T ss_pred ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH----HHH----HHHHHcCCcC-------
Confidence 111 123467999999988889999999999999999998 9999854311 112 2222222111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.........+.+++.+||..+|++||++.++++.|+++.
T Consensus 218 --~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 218 --PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred --CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 011123356889999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=325.53 Aligned_cols=255 Identities=24% Similarity=0.269 Sum_probs=196.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.++||+|+||.||+++.+ +++.||+|++.+.. ......+..|+.++..++|++|+++++++..++..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46888999999999999999876 47889999986422 223345778999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.++++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 81 ey~~~g~L~~~l~~~~---~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 81 DYYVGGDLLTLLSKFE---DRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred eccCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 9999999999997643 24788899999999999999999 89999999999999999999999999999876543
Q ss_pred ccccccccccccccccCCCcCC-----CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQ-----SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
..........||+.|+|||++. ...++.++|||||||++|||++|+.||.... ...... .+.....
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~-------~~~~~~-~i~~~~~- 225 (332)
T cd05623 155 DGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES-------LVETYG-KIMNHKE- 225 (332)
T ss_pred CCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC-------HHHHHH-HHhCCCc-
Confidence 2222233457899999999875 3467899999999999999999999986431 111111 1111110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAM--RPTMLHVLKF 952 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~ell~~ 952 (959)
... .+.........+.+++.+|+..+|++ |++++|++++
T Consensus 226 ~~~----~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 226 RFQ----FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ccc----CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 000 11111223445677788877654444 7899999876
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=318.98 Aligned_cols=261 Identities=27% Similarity=0.348 Sum_probs=192.5
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcC---CCCceeccccceec-----CC
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKV---KHQNLVPLLGYCSF-----DE 748 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~-----~~ 748 (959)
+|++.+.||+|+||.||+|+++ +++.||+|.+.... ......+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999876 68899999886432 11223455676666655 79999999998754 24
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..++||||+++ ++.+++..... ..+++..+..++.|++.|++|+| +.|++||||||+||+++.++.+||+|||+
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPP--PGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCc
Confidence 57899999975 89888876432 34789999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
++..... .......++..|+|||++.+..++.++||||+||++|||++|++||....... ....+.........
T Consensus 155 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~----~~~~~~~~~~~~~~ 228 (288)
T cd07863 155 ARIYSCQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD----QLGKIFDLIGLPPE 228 (288)
T ss_pred cccccCc--ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH----HHHHHHHHhCCCCh
Confidence 9765422 12233467899999999988899999999999999999999999986532211 11111111100000
Q ss_pred c----------cccCcc---ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 A----------DVLDPT---VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~----------~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ....+. .......+....+.+++.+|++.||++|||+.|++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 229 DDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred hhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0 000000 0000112234567899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=326.27 Aligned_cols=255 Identities=23% Similarity=0.267 Sum_probs=197.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|+.+ +++.||+|++.... ......+.+|..++..++|++|+++++++..++..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47889999999999999999875 57889999986432 223345778999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... ..+++..+..++.|++.||+|+| ++||+||||||+||+++.++.+||+|||++.....
T Consensus 81 Ey~~gg~L~~~l~~~~---~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 81 DYYVGGDLLTLLSKFE---DRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred eCCCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 9999999999998643 25788899999999999999999 89999999999999999999999999999976643
Q ss_pred ccccccccccccccccCCCcCCC-----CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQS-----GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
..........|++.|+|||++.+ +.++.++||||+||++|||++|+.||..... ... ...+......
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-------~~~-~~~i~~~~~~ 226 (331)
T cd05624 155 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL-------VET-YGKIMNHEER 226 (331)
T ss_pred CCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH-------HHH-HHHHHcCCCc
Confidence 33222233568999999998765 4678899999999999999999999864321 111 1111111100
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAM--RPTMLHVLKF 952 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~ell~~ 952 (959)
. ..+....+....+.+++.+|+..++++ |+++++++++
T Consensus 227 -~----~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 227 -F----QFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred -c----cCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 0 011111223456778888888866544 5688888765
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=313.75 Aligned_cols=252 Identities=25% Similarity=0.393 Sum_probs=201.1
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
+.|++.++||+|+||.||+|+.. +++.||+|.+........+.+.+|+.+++.++|||++++++++..+...++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 56888999999999999999875 58899999987766666777889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
+++++..++.... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||.+...... .
T Consensus 92 ~~~~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-~ 164 (292)
T cd06644 92 PGGAVDAIMLELD---RGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT-L 164 (292)
T ss_pred CCCcHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceecccc-c
Confidence 9999998886543 24788999999999999999999 899999999999999999999999999998654321 1
Q ss_pred cccccccccccccCCCcCC-----CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQ-----SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
.......+++.|+|||++. ...++.++|||||||++|||++|..||..... .... ........
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-------~~~~-~~~~~~~~---- 232 (292)
T cd06644 165 QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-------MRVL-LKIAKSEP---- 232 (292)
T ss_pred cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-------HHHH-HHHhcCCC----
Confidence 1223345788999999874 34578899999999999999999999854211 1111 11111110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+.. .........+.+++.+||+.||++||++++++++
T Consensus 233 -~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 233 -PTL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred -ccC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 100 1112334467889999999999999999999863
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=323.10 Aligned_cols=237 Identities=25% Similarity=0.336 Sum_probs=186.8
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHH-HHHhcCCCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEM-ETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~-~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
+.||+|+||+||+|++. +|+.||+|++.... ......+..|. .+++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999875 68999999986532 12223344444 456789999999999999999999999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
|+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++...... ...
T Consensus 81 g~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~ 152 (323)
T cd05575 81 GELFFHLQRER----SFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SKT 152 (323)
T ss_pred CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-CCc
Confidence 99999987643 5788899999999999999999 899999999999999999999999999998753221 122
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (959)
.....||+.|+|||++.+..++.++|||||||++|||++|..||..... .. ....+..... ...+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-------~~-~~~~i~~~~~------~~~~- 217 (323)
T cd05575 153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-------AE-MYDNILNKPL------RLKP- 217 (323)
T ss_pred cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-------HH-HHHHHHcCCC------CCCC-
Confidence 2345689999999999999999999999999999999999999864211 11 1122211110 0011
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 002155 920 DSKPMMLKMLRIAGDCLSDNPAMRPTML 947 (959)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rps~~ 947 (959)
.....+.+++.+|++.||++||++.
T Consensus 218 ---~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 218 ---NISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred ---CCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 1234677899999999999999884
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=326.16 Aligned_cols=238 Identities=26% Similarity=0.343 Sum_probs=191.0
Q ss_pred CeeccCCCeEEEEEEc----CCCCEEEEEEccccch--hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 685 NIIGDGGFGTVYKAAL----PDGKTVAVKKLSQAKT--QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
+.||+|+||.||+++. .+|+.||+|++..... .....+..|++++++++||||+++++++..++..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999875 3578999999875432 233456789999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+|+|.+++.... .+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||++....... .
T Consensus 82 ~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~ 153 (318)
T cd05582 82 GGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-K 153 (318)
T ss_pred CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-C
Confidence 999999986543 5789999999999999999999 8999999999999999999999999999987653321 2
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccC
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (959)
......|++.|+|||.+.+..++.++|||||||++|||++|+.||..... .. ....+..... .
T Consensus 154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-------~~-~~~~i~~~~~------~--- 216 (318)
T cd05582 154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR-------KE-TMTMILKAKL------G--- 216 (318)
T ss_pred ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH-------HH-HHHHHHcCCC------C---
Confidence 22345789999999999888899999999999999999999999864311 11 1111211110 0
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 002155 919 ADSKPMMLKMLRIAGDCLSDNPAMRPTMLH 948 (959)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 948 (959)
.+......+.+++.+||+.||++||++.+
T Consensus 217 -~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 217 -MPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 01112345778999999999999999544
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-35 Score=311.66 Aligned_cols=249 Identities=30% Similarity=0.457 Sum_probs=199.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceecccccee-cCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS-FDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~ 757 (959)
++|++.+.||+|+||.||+|... |..||+|.+.... ..+.+.+|+.++++++|++++++++++. .+...++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 46888999999999999999874 7889999886433 2456889999999999999999998754 456789999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.++++.... ..+++..++.++.|++.|++||| +.|++||||||+||++++++.+|++|||.+.......
T Consensus 83 ~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~- 156 (256)
T cd05082 83 AKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 156 (256)
T ss_pred CCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccC-
Confidence 99999999976542 34788999999999999999999 8999999999999999999999999999987543211
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
....++..|+|||+..+..++.++||||+||++|||++ |+.||.... ... +...+..+.. +.
T Consensus 157 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-------~~~-~~~~~~~~~~-----~~- 219 (256)
T cd05082 157 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-------LKD-VVPRVEKGYK-----MD- 219 (256)
T ss_pred ---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-------HHH-HHHHHhcCCC-----CC-
Confidence 12234568999999988889999999999999999998 898875321 111 1122222111 11
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
........+.+++.+||+.+|++|||+.++++.|+++
T Consensus 220 ---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 220 ---APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 1112345678899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=308.19 Aligned_cols=239 Identities=24% Similarity=0.400 Sum_probs=187.7
Q ss_pred CeeccCCCeEEEEEEcCC-------------CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 685 NIIGDGGFGTVYKAALPD-------------GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
+.||+|+||.||+|+..+ ...||+|++..........+.+|+.+++.++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998532 2358889887655555567888999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc-------EEEc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE-------AKVA 824 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-------~kl~ 824 (959)
+||||+++|+|..++.... ..+++..++.++.||++|++||| +.+|+||||||+||+++.++. ++++
T Consensus 81 lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~ 154 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKS---DVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLS 154 (262)
T ss_pred EEEecccCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeC
Confidence 9999999999999887543 35788999999999999999999 899999999999999986654 8999
Q ss_pred ccccccccccccccccccccccccccCCCcCC-CCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHH
Q 002155 825 DFGLARLISACETHVSTDIAGTFGYIPPEYGQ-SGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 825 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
|||.+...... ....++..|+|||.+. +..++.++|||||||++|||++ |..||...... . ...
T Consensus 155 d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-------~-~~~- 220 (262)
T cd05077 155 DPGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA-------E-KER- 220 (262)
T ss_pred CCCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh-------H-HHH-
Confidence 99998654321 2345778999999876 4668999999999999999984 77776532111 0 011
Q ss_pred hhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002155 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953 (959)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 953 (959)
...... . ... +....+.+++.+||+.||++||++.+|++.+
T Consensus 221 ~~~~~~-~-----~~~----~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 221 FYEGQC-M-----LVT----PSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHhcCc-c-----CCC----CChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 111100 0 001 1234678899999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=312.26 Aligned_cols=250 Identities=25% Similarity=0.384 Sum_probs=201.7
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
+|++.+.||+|+||.||++... +++.||+|.++.. .....+.+.+|+.+++.++|||++++++++..++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4778899999999999999875 6889999988643 2334567788999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
+++++.+++....+ ..+++..+..++.|++.|+.||| +.|++|+||||+||++++++.++++|||.+........
T Consensus 81 ~~~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 155 (255)
T cd08219 81 DGGDLMQKIKLQRG--KLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA 155 (255)
T ss_pred CCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence 99999998875432 35788899999999999999999 89999999999999999999999999999976543221
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......+++.|+|||+..+..++.++||||+|+++|+|++|..||..... .. .......+... +
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-------~~-~~~~~~~~~~~----~--- 219 (255)
T cd08219 156 -YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-------KN-LILKVCQGSYK----P--- 219 (255)
T ss_pred -ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-------HH-HHHHHhcCCCC----C---
Confidence 22335688899999999888899999999999999999999999864211 11 11112111111 0
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+......+.+++.+||+.||++||++.+++..
T Consensus 220 --~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 220 --LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 111233467889999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=316.49 Aligned_cols=251 Identities=25% Similarity=0.333 Sum_probs=198.5
Q ss_pred CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
|+..++||+|+||+||+|.+. +++.||+|.+.... ......+.+|++++++++|++++++++++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667789999999999999875 68899999986432 22234567899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|.+++.... ...+++..+..++.|++.|+.||| +.||+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 82 MNGGDLKFHIYNMG--NPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred ccCccHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 99999999887543 235899999999999999999999 8999999999999999999999999999987653221
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
......|+..|+|||.+.+..++.++|+||+||++||+++|..||....... ....+........ .
T Consensus 157 --~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~----~~~~~~~~~~~~~------~-- 222 (285)
T cd05632 157 --SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV----KREEVDRRVLETE------E-- 222 (285)
T ss_pred --cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhhhccc------c--
Confidence 1233468999999999988899999999999999999999999986432211 0111111111110 0
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPT-----MLHVLKF 952 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~ell~~ 952 (959)
.........+.+++..||+.||++||+ +.+++.+
T Consensus 223 --~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 223 --VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred --ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 011223345778999999999999999 7777764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=307.96 Aligned_cols=254 Identities=26% Similarity=0.392 Sum_probs=190.2
Q ss_pred CeeccCCCeEEEEEEcCC---CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCC
Q 002155 685 NIIGDGGFGTVYKAALPD---GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNG 760 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 760 (959)
+.||+|+||.||+|.+.+ +..+|+|.++... ......+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999998643 4579999886543 233456888999999999999999999999889999999999999
Q ss_pred CHHHHHhhhcC-CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 761 SLDLWLRNRTG-SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 761 ~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
+|.++++.... .....++..+..++.|+++|++||| +.+++||||||+||+++.++.++++|||.+..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 99999976432 1234567788899999999999999 8999999999999999999999999999986543222111
Q ss_pred -cccccccccccCCCcCCCC-------CCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 840 -STDIAGTFGYIPPEYGQSG-------RSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 840 -~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
.....++..|+|||++.+. .++.++||||||+++|||++ |+.||...... .... .........
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~----~~~~----~~~~~~~~~ 229 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE----QVLT----YTVREQQLK 229 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChH----HHHH----HHhhcccCC
Confidence 1223567889999987542 35789999999999999996 99998543211 1111 111111111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 954 (959)
...+.... .....+.+++..|| .+|++|||++||++.|+
T Consensus 230 ~~~~~~~~----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 230 LPKPRLKL----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCccCC----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11222111 12234667888899 58999999999998875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-35 Score=311.86 Aligned_cols=257 Identities=23% Similarity=0.352 Sum_probs=199.8
Q ss_pred HHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 676 EATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 676 ~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.+++++.....||+|+||.||+|++. ++..||+|.+........+.+.+|+.+++.++|+||+++++++..++..++||
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 84 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM 84 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence 35566666778999999999999865 57889999987665556677899999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-CCcEEEcccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE-EFEAKVADFGLARLIS 833 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~ 833 (959)
||+++++|.++++..... ...++..+..++.|++.|++||| +.||+||||||+||+++. ++.++|+|||.+....
T Consensus 85 e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 85 EQVPGGSLSALLRSKWGP-LKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA 160 (268)
T ss_pred ecCCCCCHHHHHHHhccc-CCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence 999999999999865321 11277888899999999999999 899999999999999976 6799999999987653
Q ss_pred cccccccccccccccccCCCcCCCCC--CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGR--STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.... ......+++.|+|||+..+.. ++.++||||+|+++|++++|..||...... ....+......
T Consensus 161 ~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~----~~~~~~~~~~~------- 228 (268)
T cd06624 161 GINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP----QAAMFKVGMFK------- 228 (268)
T ss_pred cCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccCh----hhhHhhhhhhc-------
Confidence 2221 122345788999999876543 788999999999999999999998542111 00000000000
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..+ ..+......+.+++.+||+.+|++||++.|++++
T Consensus 229 ~~~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 229 IHP----EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred cCC----CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 011 1122334567889999999999999999999864
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=310.57 Aligned_cols=254 Identities=26% Similarity=0.387 Sum_probs=204.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
++|++.+.||+|+||.||+|... +++.+|+|.+..........+.+|++++++++|||++++++++..+...+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 57888999999999999999875 57889999987665556678889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++.... ..+++.++..++.|++.|++||| +.+++||||+|+||++++++.++|+|||.+.......
T Consensus 83 ~~~~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~- 155 (262)
T cd06613 83 GGGSLQDIYQVTR---GPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI- 155 (262)
T ss_pred CCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhhh-
Confidence 9999999987653 25788999999999999999999 8899999999999999999999999999997654321
Q ss_pred cccccccccccccCCCcCCCC---CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSG---RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
.......++..|+|||...+. .++.++||||+|+++|||++|+.||...... ..... ..... ..+
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~-------~~~~~-~~~~~----~~~ 223 (262)
T cd06613 156 AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM-------RALFL-ISKSN----FPP 223 (262)
T ss_pred hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH-------HHHHH-HHhcc----CCC
Confidence 122334678899999998776 7899999999999999999999998542211 00111 11110 011
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ...........+.+++.+||..+|.+||++++++.+
T Consensus 224 ~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 224 P-KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred c-cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1 111223345678899999999999999999999863
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=318.22 Aligned_cols=250 Identities=23% Similarity=0.388 Sum_probs=202.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.+|++.+.||.|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|||++++++++..++..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 46888999999999999999864 68999999987655555667889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++... .+++.++..++.|++.|++||| +.|++||||||+||+++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 99 AGGSLTDVVTET-----CMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred CCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 999999998653 3788999999999999999999 89999999999999999999999999999876543222
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......++..|+|||.+.+..++.++|||||||++|++++|+.||...... ..... .........
T Consensus 171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~-------~~~~~-~~~~~~~~~------ 235 (296)
T cd06655 171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-------RALYL-IATNGTPEL------ 235 (296)
T ss_pred -cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHH-HHhcCCccc------
Confidence 222346788999999998888999999999999999999999998653211 11111 111100000
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.........+.+++.+||..||++||++.+++.+
T Consensus 236 -~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 236 -QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred -CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 1112234467789999999999999999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=323.20 Aligned_cols=241 Identities=23% Similarity=0.297 Sum_probs=187.6
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHH-HHHHhcCCCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAE-METLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e-~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
+.||+|+||.||+|++. +++.||+|++.... ......+..| ..+++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999876 57889999986532 1222333444 3456788999999999999999999999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
|+|.+++.... .+.+..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~~~~~~----~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~-~~~ 152 (325)
T cd05602 81 GELFYHLQRER----CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH-NGT 152 (325)
T ss_pred CcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC-CCC
Confidence 99999997643 4677888899999999999999 899999999999999999999999999998754321 122
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (959)
.....||+.|+|||++.+..++.++||||+||++|||++|..||..... ... ...+..... ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~~~-~~~i~~~~~--~~------- 215 (325)
T cd05602 153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-------AEM-YDNILNKPL--QL------- 215 (325)
T ss_pred cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH-------HHH-HHHHHhCCc--CC-------
Confidence 3345789999999999999999999999999999999999999864221 111 111111110 00
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 920 DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
.......+.+++.+|++.||.+||++.+.+.
T Consensus 216 -~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 216 -KPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred -CCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 1122345778999999999999999875443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=321.87 Aligned_cols=241 Identities=24% Similarity=0.321 Sum_probs=191.7
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCC-CCceeccccceecCCceEEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 754 (959)
+|+..+.||+|+||.||+|+.+ +|+.||+|++.... ....+.+..|..+++.+. |++|+++++++...+..|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4777899999999999999865 68899999987532 223345677888888886 567888999999889999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... .+++.++..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 81 Ey~~~g~L~~~i~~~~----~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 81 EYVNGGDLMYHIQQVG----KFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred cCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 9999999999987643 5889999999999999999999 89999999999999999999999999999875432
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+...... .
T Consensus 154 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--------~~~~~i~~~~~~---~- 220 (323)
T cd05615 154 DG-VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED--------ELFQSIMEHNVS---Y- 220 (323)
T ss_pred CC-ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCC---C-
Confidence 11 1223456899999999999889999999999999999999999998653211 111222211110 0
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM 946 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 946 (959)
+......+.+++.+|++.||.+|+++
T Consensus 221 ------p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 221 ------PKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ------CccCCHHHHHHHHHHcccCHhhCCCC
Confidence 11223467789999999999999974
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-35 Score=320.21 Aligned_cols=199 Identities=26% Similarity=0.351 Sum_probs=161.0
Q ss_pred CCeeccCCCeEEEEEEcC---CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceec--CCceEEEEEecc
Q 002155 684 TNIIGDGGFGTVYKAALP---DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF--DEEKLLVYEYMV 758 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~ 758 (959)
+++||+|+||+||+|+.+ +++.||+|.+..... ...+.+|+.++++++||||+++++++.. +...++||||++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999864 467899999865322 2456789999999999999999998854 456789999986
Q ss_pred CCCHHHHHhhhcC-----CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE----CCCCcEEEcccccc
Q 002155 759 NGSLDLWLRNRTG-----SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL----NEEFEAKVADFGLA 829 (959)
Q Consensus 759 ~g~L~~~l~~~~~-----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfg~~ 829 (959)
+ ++.+++..... ....+++..+..++.|++.|++||| +.||+||||||+||++ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 4 88888754321 1235788999999999999999999 8999999999999999 45679999999999
Q ss_pred cccccccc--cccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCc
Q 002155 830 RLISACET--HVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFK 888 (959)
Q Consensus 830 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~ 888 (959)
+....... .......+|+.|+|||++.+ ..++.++||||+||++|||++|++||.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~ 221 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 221 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcc
Confidence 86643211 11234568999999998876 4589999999999999999999999975443
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=320.36 Aligned_cols=259 Identities=28% Similarity=0.463 Sum_probs=203.1
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC--------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecCC
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP--------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDE 748 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 748 (959)
++|.+.++||+|+||.||+|+.. +...||+|.+.... ......+..|+.+++++ +||||+++++++..++
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 56888999999999999999742 24578999887532 33456688899999999 6999999999999889
Q ss_pred ceEEEEEeccCCCHHHHHhhhcC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTG------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN 816 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 816 (959)
..++||||+++|+|.+++..... ....+++.++..++.|++.|++||| +.|++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeEEEc
Confidence 99999999999999999976432 1235788999999999999999999 89999999999999999
Q ss_pred CCCcEEEcccccccccccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCc
Q 002155 817 EEFEAKVADFGLARLISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGN 894 (959)
Q Consensus 817 ~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~ 894 (959)
.++.+||+|||.++......... .....++..|+|||.+.+..++.++||||||+++||+++ |..||.....
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~------ 242 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV------ 242 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH------
Confidence 99999999999997654322111 111234467999999988889999999999999999999 8888743211
Q ss_pred hHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 895 LVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..+...+....... . ...+...+.+++.+||+.||++||++.++++.|+++.
T Consensus 243 --~~~~~~~~~~~~~~-----~----~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 243 --EELFKLLREGHRMD-----K----PSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred --HHHHHHHHcCCCCC-----C----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 11222222221111 1 1122346778999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=312.54 Aligned_cols=250 Identities=25% Similarity=0.378 Sum_probs=198.6
Q ss_pred CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccC
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
|++.+.||+|+||.||+|.+. ++..+|+|.+........+.+.+|+++++.++|||++++++++..+...++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 566788999999999999876 4778899988765555567788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
+++..++.... ..+++..+..++.|++.||+||| +.|++||||||+||+++.++.++++|||++...... ...
T Consensus 87 ~~l~~~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~-~~~ 159 (282)
T cd06643 87 GAVDAVMLELE---RPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-IQR 159 (282)
T ss_pred CcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEcccccccccccc-ccc
Confidence 99999886533 35889999999999999999999 899999999999999999999999999998764321 122
Q ss_pred cccccccccccCCCcCC-----CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 840 STDIAGTFGYIPPEYGQ-----SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
.....++..|+|||++. +..++.++||||+||++|||++|++||..... ...+....... . +
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-------~~~~~~~~~~~-~-----~ 226 (282)
T cd06643 160 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP-------MRVLLKIAKSE-P-----P 226 (282)
T ss_pred cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH-------HHHHHHHhhcC-C-----C
Confidence 23346889999999873 44578899999999999999999999854211 11111111110 0 0
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ..+......+.+++.+||+.||++||++.+++++
T Consensus 227 ~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 227 TL--AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred CC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 0112234568899999999999999999999864
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=331.36 Aligned_cols=374 Identities=28% Similarity=0.402 Sum_probs=282.9
Q ss_pred CCCCcEEEcCCCcCC-CCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEe
Q 002155 65 CSMLKSISLSNNFLS-GSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLD 143 (959)
Q Consensus 65 l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ 143 (959)
|+-.+-.|+++|.++ +..|.+...++++++|.|...++. .+|..++.|.+|++|.+++|++
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L----------------- 67 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQL----------------- 67 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhh-----------------
Confidence 334455566666665 345555666666666666665555 3455555555555555444444
Q ss_pred ccCCccccccCcccccccceeEEEcccccccc-ccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCC
Q 002155 144 LDSNNFTGIIPVSIWNSETLMEFSAANNLLEG-SLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFD 222 (959)
Q Consensus 144 ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~ 222 (959)
. .+-..+..++.|+.+.+++|++.. -+|..+-.+..|..||||+|+++ ..|..+..-+++-+|+||+|.|.
T Consensus 68 ------~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie 139 (1255)
T KOG0444|consen 68 ------I-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE 139 (1255)
T ss_pred ------H-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc
Confidence 3 334456677888888888888763 56777778888888888888888 67888888888888888888888
Q ss_pred ccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCC
Q 002155 223 GIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSY 302 (959)
Q Consensus 223 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~ 302 (959)
.++...|.+|+.|-.||||+|++.. .|..+..+..||+|.|++|.+.
T Consensus 140 tIPn~lfinLtDLLfLDLS~NrLe~-LPPQ~RRL~~LqtL~Ls~NPL~-------------------------------- 186 (1255)
T KOG0444|consen 140 TIPNSLFINLTDLLFLDLSNNRLEM-LPPQIRRLSMLQTLKLSNNPLN-------------------------------- 186 (1255)
T ss_pred cCCchHHHhhHhHhhhccccchhhh-cCHHHHHHhhhhhhhcCCChhh--------------------------------
Confidence 6665667778888888888888874 4667778888888888887653
Q ss_pred CcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCC-CCCCCCcCCCCcceEEEeeCcccCCcc
Q 002155 303 NRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLT-GPIPSEFGDSIKLQGLYLGNNQLTGSI 381 (959)
Q Consensus 303 n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~ 381 (959)
...-..+..+++|++|.+|+.+-+ .-+|..+.++.+|..+++|.|.+. .+
T Consensus 187 ----------------------------hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~v 237 (1255)
T KOG0444|consen 187 ----------------------------HFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IV 237 (1255)
T ss_pred ----------------------------HHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cc
Confidence 011112223455666666665432 246777788888888888888887 78
Q ss_pred ccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchh
Q 002155 382 PWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSA 461 (959)
Q Consensus 382 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 461 (959)
|+.+.++++|+.|+|++|+|+ .+....+.+.+|++|+||.|+++ .+|+++..++.|+.|++.+|+++- .
T Consensus 238 Pecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~F------e--- 306 (1255)
T KOG0444|consen 238 PECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTF------E--- 306 (1255)
T ss_pred hHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccc------c---
Confidence 888888999999999999988 45555667788999999999998 899999999999999999999862 1
Q ss_pred hhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEe
Q 002155 462 AWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLS 541 (959)
Q Consensus 462 ~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 541 (959)
-+|..++.+.+|+.+..++|.+. .+|+.++++.+|+.|.|+.|++- .+|+.+.-|+.|+.||
T Consensus 307 ----------------GiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLD 368 (1255)
T KOG0444|consen 307 ----------------GIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLD 368 (1255)
T ss_pred ----------------CCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceee
Confidence 36888999999999999999998 89999999999999999999997 6899999999999999
Q ss_pred cccCcCcccCCCCc
Q 002155 542 LAENRLEGMVPRSG 555 (959)
Q Consensus 542 l~~N~l~~~~~~~~ 555 (959)
+..|+--.+||...
T Consensus 369 lreNpnLVMPPKP~ 382 (1255)
T KOG0444|consen 369 LRENPNLVMPPKPN 382 (1255)
T ss_pred ccCCcCccCCCCcc
Confidence 99999888888763
|
|
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-35 Score=308.84 Aligned_cols=248 Identities=29% Similarity=0.443 Sum_probs=198.3
Q ss_pred CeeccCCCeEEEEEEcCCCCEEEEEEccccchh-hHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCHH
Q 002155 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQ-GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLD 763 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~ 763 (959)
++||+|+||.||+|.+.+++.||+|.+...... ....+.+|++++++++||||+++++++......++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 469999999999999877999999998765433 4567889999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccc-cc
Q 002155 764 LWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS-TD 842 (959)
Q Consensus 764 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~-~~ 842 (959)
++++... ..+++..+..++.+++.|++||| +.+++||||||+||+++.++.++|+|||.+........... ..
T Consensus 81 ~~l~~~~---~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (251)
T cd05041 81 TFLRKKK---NRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL 154 (251)
T ss_pred HHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecccc
Confidence 9997643 24788899999999999999999 88999999999999999999999999999976532111111 11
Q ss_pred ccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCC
Q 002155 843 IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADS 921 (959)
Q Consensus 843 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (959)
..++..|+|||.+.++.++.++||||+|+++|||++ |..||...... . ......... ....+
T Consensus 155 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~----~----~~~~~~~~~---------~~~~~ 217 (251)
T cd05041 155 KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ----Q----TRERIESGY---------RMPAP 217 (251)
T ss_pred CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH----H----HHHHHhcCC---------CCCCC
Confidence 233567999999888889999999999999999999 78887543211 1 111121111 00112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 922 KPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 922 ~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
......+.+++.+||..+|++||++.|+++.|++
T Consensus 218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 2334578899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=345.92 Aligned_cols=256 Identities=22% Similarity=0.331 Sum_probs=197.5
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceec--CCceE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSF--DEEKL 751 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~ 751 (959)
..++|++.+.||+|+||.||+|++. ++..||+|.+... .......+..|+.++++++|||||+++++|.. ....|
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 3468999999999999999999875 5778999987643 23345678899999999999999999998854 35689
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC----CCCeEeCCCCCCCEEECC----------
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF----TPHIIHRDIKASNILLNE---------- 817 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----~~~ivH~dlk~~Nill~~---------- 817 (959)
+||||+++|+|.+++.........+++..++.|+.||+.||+|||... ..+||||||||+|||++.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 999999999999999865433346899999999999999999999421 145999999999999964
Q ss_pred -------CCcEEEcccccccccccccccccccccccccccCCCcCCC--CCCCCcCcchhHHHHHHHHHhCCCCCCCCCc
Q 002155 818 -------EFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQS--GRSTTRGDVYSFGVILLELVTGKEPTGPEFK 888 (959)
Q Consensus 818 -------~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~~~~~ 888 (959)
.+.+||+|||++...... .......||+.|+|||++.+ ..++.++|||||||++|||++|..||.....
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~--s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~ 248 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIE--SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN 248 (1021)
T ss_pred cccccCCCCceEEccCCcccccccc--ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 235899999999765422 12234578999999998754 4578999999999999999999999964211
Q ss_pred cccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 889 DIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
...+...+.... ... .......+.++|.+||+.+|++||++.|++.
T Consensus 249 -------~~qli~~lk~~p-------~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 249 -------FSQLISELKRGP-------DLP---IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred -------HHHHHHHHhcCC-------CCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 112222222211 000 0112346788999999999999999999984
|
|
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=329.10 Aligned_cols=252 Identities=23% Similarity=0.308 Sum_probs=195.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|+..+.||+|+||.||+|+.+ +++.||+|++.... ......+..|+.++..++||+|+++++.+.+++..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999875 58899999986532 233456778999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.++|+|||++.....
T Consensus 81 E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 81 EFLPGGDMMTLLMKKD----TLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred eCCCCccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 9999999999997643 5788999999999999999999 89999999999999999999999999999865421
Q ss_pred ccc----------------------------------cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCC
Q 002155 835 CET----------------------------------HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK 880 (959)
Q Consensus 835 ~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~ 880 (959)
... ......+||+.|+|||++.+..++.++||||+||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 100 0011346899999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC---HHHHHHH
Q 002155 881 EPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT---MLHVLKF 952 (959)
Q Consensus 881 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~~ell~~ 952 (959)
.||...... . ....+........+ |.. ........+++.+|+ .||++|++ ++|++++
T Consensus 234 ~Pf~~~~~~-------~-~~~~i~~~~~~~~~-p~~-----~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 234 PPFCSETPQ-------E-TYRKVMNWKETLVF-PPE-----VPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCCCHH-------H-HHHHHHcCCCceec-CCC-----CCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 999653221 1 11112111100001 110 112335566777766 49999985 6777654
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-35 Score=310.83 Aligned_cols=250 Identities=30% Similarity=0.488 Sum_probs=202.5
Q ss_pred CeeccCCCeEEEEEEcCC----CCEEEEEEccccchh-hHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALPD----GKTVAVKKLSQAKTQ-GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
++||+|+||.||+|...+ +..||+|.+...... ..+.+.+|++.++.++|+|++++++++..+...++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999998753 788999998765433 356788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhhcCC-----ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 760 GSLDLWLRNRTGS-----LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 760 g~L~~~l~~~~~~-----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
++|.+++...... ...+++.+++.++.|++.|++||| +.|++||||||+||++++++.++|+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999875211 246899999999999999999999 89999999999999999999999999999987654
Q ss_pred ccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 835 CET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 835 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
... .......++..|+|||......++.++||||+|+++|||++ |..||..... ..+.+.+......
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~--- 226 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--------EEVLEYLRKGYRL--- 226 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCC---
Confidence 321 11233457889999999888889999999999999999999 5888865311 1122222221111
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 954 (959)
..+......+.+++.+||+.+|++||++.|++++|+
T Consensus 227 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 227 ------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 111222457889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=316.36 Aligned_cols=253 Identities=33% Similarity=0.494 Sum_probs=199.0
Q ss_pred CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHH--HHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHR--EFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~--~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
|++.+.||+|+||+||+|+.. +++.||+|.+......... ....|+..+++++||||+++++++..+...++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 567889999999999999976 4668999998765443322 3456999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++.... .+++..+..++.|+++||++|| +.+++||||||+||+++.++.++|+|||.+.... ...
T Consensus 81 ~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~~ 152 (260)
T PF00069_consen 81 PGGSLQDYLQKNK----PLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS-ENN 152 (260)
T ss_dssp TTEBHHHHHHHHS----SBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEEST-STT
T ss_pred ccccccccccccc----cccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc-ccc
Confidence 9999999998333 5789999999999999999999 7899999999999999999999999999997542 122
Q ss_pred cccccccccccccCCCcCC-CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQ-SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......++..|+|||+.. +..++.++||||+|+++|+|++|..||...... +.................
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~----- 223 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD----DQLEIIEKILKRPLPSSS----- 223 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH----HHHHHHHHHHHTHHHHHT-----
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccch----hhhhhhhhcccccccccc-----
Confidence 3334557899999999988 788999999999999999999999998754111 111111111111000000
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.........+.+++.+||+.||++||++.+++++
T Consensus 224 --~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 224 --QQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp --TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred --cccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000112678899999999999999999999863
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-35 Score=325.41 Aligned_cols=263 Identities=25% Similarity=0.285 Sum_probs=194.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCC------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE------ 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 748 (959)
.++|++.+.||+|+||.||+|++. +|+.||+|++... .......+.+|+.+++.++||||+++++++...+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 468999999999999999999875 5889999998643 2233456778999999999999999999886443
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIHM------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred eeEEEEeCCCc-CHHHHHhc------cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCC
Confidence 46999999975 56665542 3677888999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCcccc-----------CCchHH
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIE-----------GGNLVG 897 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~-----------~~~~~~ 897 (959)
++.... ........||+.|+|||.+.+..++.++||||+||++|||++|+.||........ ......
T Consensus 170 a~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (359)
T cd07876 170 ARTACT--NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMN 247 (359)
T ss_pred cccccc--CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHH
Confidence 975432 2223345789999999999999999999999999999999999999975321100 000000
Q ss_pred H----HHHHhhcCccccccC-----cc-ccC---CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 898 W----VFQKMKKGQAADVLD-----PT-VLT---ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 898 ~----~~~~~~~~~~~~~~~-----~~-~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. +.............. +. ..+ .........+.+++.+||+.||++|||+.|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 248 RLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0 000000000000000 00 000 0011123457889999999999999999999875
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=314.68 Aligned_cols=262 Identities=25% Similarity=0.344 Sum_probs=200.9
Q ss_pred HHHHHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceecccccee----
Q 002155 672 VHILEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCS---- 745 (959)
Q Consensus 672 ~~~~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~---- 745 (959)
+.+..+.++|++.+.||+|+||.||+|+.. +++.+|+|++.... .....+..|+.+++.+ +||||+++++++.
T Consensus 11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 89 (286)
T cd06638 11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDV 89 (286)
T ss_pred ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeeccc
Confidence 334456789999999999999999999875 57899999876432 2235677899999999 6999999999873
Q ss_pred -cCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEc
Q 002155 746 -FDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVA 824 (959)
Q Consensus 746 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 824 (959)
.++..++||||+++++|.++++........+++..+..++.|++.|+.||| +.+++|||+||+||+++.++.++++
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~kl~ 166 (286)
T cd06638 90 KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVKLV 166 (286)
T ss_pred CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCCEEEc
Confidence 345689999999999999988754333346788999999999999999999 8899999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcCC-----CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHH
Q 002155 825 DFGLARLISACETHVSTDIAGTFGYIPPEYGQ-----SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWV 899 (959)
Q Consensus 825 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 899 (959)
|||.++...... .......|++.|+|||++. +..++.++||||+||++|||++|+.||...... ...
T Consensus 167 dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~-------~~~ 238 (286)
T cd06638 167 DFGVSAQLTSTR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM-------RAL 238 (286)
T ss_pred cCCceeecccCC-CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh-------HHH
Confidence 999987654321 1223346889999999874 345788999999999999999999998643111 000
Q ss_pred HHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002155 900 FQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953 (959)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 953 (959)
. ............ +......+.+++.+||+.||++||++.|++++.
T Consensus 239 ~-~~~~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 239 F-KIPRNPPPTLHQ-------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred h-hccccCCCcccC-------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 0 011110000001 111234688899999999999999999999864
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=313.44 Aligned_cols=253 Identities=26% Similarity=0.397 Sum_probs=202.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|++. ++..||+|.+........+.+..|++++++++||||+++++++..+...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 356888899999999999999875 6889999998766666667788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|.+++.... ..+++..+..++.|++.|+.||| +.|++||||||+||+++.++.++|+|||.+.......
T Consensus 84 ~~~~~L~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (280)
T cd06611 84 CDGGALDSIMLELE---RGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL 157 (280)
T ss_pred cCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhcccc
Confidence 99999999987654 35889999999999999999999 8899999999999999999999999999986543221
Q ss_pred ccccccccccccccCCCcCC-----CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQ-----SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.......+++.|+|||.+. ...++.++||||+|+++|||++|+.||..... .... ..+.....
T Consensus 158 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~-------~~~~-~~~~~~~~--- 225 (280)
T cd06611 158 -QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP-------MRVL-LKILKSEP--- 225 (280)
T ss_pred -cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH-------HHHH-HHHhcCCC---
Confidence 1223346889999999864 34578899999999999999999999864311 1111 11111110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+.. ..+......+.+++.+||+.+|++||++.+++++
T Consensus 226 --~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 226 --PTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred --CCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 110 0112234467889999999999999999999875
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=323.24 Aligned_cols=238 Identities=27% Similarity=0.343 Sum_probs=187.3
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHH-HHhcCCCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEME-TLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
++||+|+||+||+|+.. +|+.||+|++.... ......+..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999865 68999999986532 222334455544 56789999999999999999999999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
|+|.+++.... .+++..+..++.||+.|++||| +.||+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~ 152 (325)
T cd05604 81 GELFFHLQRER----SFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SDT 152 (325)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-CCC
Confidence 99998887543 5788999999999999999999 899999999999999999999999999998753221 122
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (959)
.....||+.|+|||++.+..++.++||||+||++|||++|..||..... .. +.+.+..... ... +
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-------~~-~~~~~~~~~~--~~~----~- 217 (325)
T cd05604 153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV-------AE-MYDNILHKPL--VLR----P- 217 (325)
T ss_pred cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH-------HH-HHHHHHcCCc--cCC----C-
Confidence 2345689999999999999999999999999999999999999864311 11 1122221111 011 1
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 002155 920 DSKPMMLKMLRIAGDCLSDNPAMRPTMLH 948 (959)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rps~~e 948 (959)
.....+.+++.+|++.||.+||++.+
T Consensus 218 ---~~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 218 ---GASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred ---CCCHHHHHHHHHHhccCHHhcCCCCC
Confidence 12345678899999999999998863
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-35 Score=313.35 Aligned_cols=258 Identities=26% Similarity=0.422 Sum_probs=203.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccchh-hHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAKTQ-GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
++|+..+.||+|+||.||+|+.+ +.+.||+|.+...... ....+..|++++++++|||++++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56888899999999999999864 3467999988654433 4567889999999999999999999999889999
Q ss_pred EEEEeccCCCHHHHHhhhcCCc-----cccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSL-----EVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
+||||+++|+|.+++....... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999997654221 25899999999999999999999 889999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhc
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKK 905 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (959)
|++...............++..|+|||.+.+..++.++||||+|+++|++++ |..||..... ... ......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~----~~~----~~~~~~ 233 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD----EEV----LNRLQA 233 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch----HHH----HHHHHc
Confidence 9986543322222233456778999999888888999999999999999999 7788753211 111 112221
Q ss_pred CccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
.... .. ....+...+.+++.+||+.+|++||++.|+++.|++
T Consensus 234 ~~~~-~~-------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 234 GKLE-LP-------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred CCcC-CC-------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 1111 00 011233468889999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-35 Score=311.81 Aligned_cols=249 Identities=25% Similarity=0.417 Sum_probs=198.8
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh---------hHHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ---------GHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
+|.+.+.||+|+||.||+|... +++.||+|.+...... ..+.+.+|+.++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4778899999999999999865 5789999987643221 22467889999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.++||||+++++|.++++... .+++..+..++.|++.|++||| +.|++||||+|+||++++++.++|+|||.+
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~ 153 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG----AFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGIS 153 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc----CccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCC
Confidence 999999999999999997643 4788899999999999999999 889999999999999999999999999999
Q ss_pred ccccccccc-----ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh
Q 002155 830 RLISACETH-----VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904 (959)
Q Consensus 830 ~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (959)
+........ ......|+..|+|||.+.+..++.++||||+||++|+|++|+.||..... ...+.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~ 226 (267)
T cd06628 154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ-------LQAIFKIGE 226 (267)
T ss_pred cccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH-------HHHHHHHhc
Confidence 766421111 11123578899999999888899999999999999999999999864211 111111111
Q ss_pred cCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...+. .+......+.+++.+||+.||.+||++.|++++
T Consensus 227 ------~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 227 ------NASPE----IPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred ------cCCCc----CCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 11111 112344567889999999999999999999863
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-35 Score=309.56 Aligned_cols=249 Identities=30% Similarity=0.437 Sum_probs=198.5
Q ss_pred CeeccCCCeEEEEEEcCC--C--CEEEEEEccccch-hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALPD--G--KTVAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
++||+|++|.||+|.+.+ + ..||+|.+..... ...+.+.+|+.++++++||||+++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998743 3 3699999987655 556778899999999999999999999887 889999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
++|.+++..... ..+++..++.++.|++.||+||| +.|++||||||+||+++.++.+||+|||++..........
T Consensus 80 ~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 80 GSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred CcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccce
Confidence 999999987542 45789999999999999999999 8999999999999999999999999999998764322111
Q ss_pred --cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 840 --STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 840 --~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.....++..|+|||.+.+..++.++||||+||++|||++ |..||...... +.. ..+... ......
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~~~----~~~~~~-~~~~~~--- 222 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS----QIL----KKIDKE-GERLER--- 222 (257)
T ss_pred ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH----HHH----HHHHhc-CCcCCC---
Confidence 112346789999999988899999999999999999999 99998542111 111 111110 000001
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
.......+.+++.+||+.+|++||++.++++.|.+
T Consensus 223 ----~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 223 ----PEACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred ----CccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 11233568889999999999999999999998853
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-35 Score=315.76 Aligned_cols=264 Identities=24% Similarity=0.429 Sum_probs=205.5
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-----CCCEEEEEEccccchh-hHHHHHHHHHHHhcCCCCceeccccceec--CCce
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-----DGKTVAVKKLSQAKTQ-GHREFTAEMETLGKVKHQNLVPLLGYCSF--DEEK 750 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~ 750 (959)
.+|++.+.||+|+||.||+|++. ++..||||++...... ..+.+.+|+++++.++||||+++++++.. +...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35777889999999999999853 3678999998765443 45678999999999999999999998876 5578
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++++|.+++.... ..+++..+..++.|++.||+||| +.|++||||||+||+++.++.++|+|||.+.
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR---DQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAK 157 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc---cccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEccccccc
Confidence 99999999999999997654 25889999999999999999999 8899999999999999999999999999998
Q ss_pred ccccccccc--cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccC-------CchHHHHHH
Q 002155 831 LISACETHV--STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG-------GNLVGWVFQ 901 (959)
Q Consensus 831 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~-------~~~~~~~~~ 901 (959)
......... .....++..|+|||...+..++.++||||||+++|||++|..|+......... ........+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE 237 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence 764222111 11223456799999988888999999999999999999999997543222100 001111111
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+..... ......+...+.+++.+||+.+|++||++.|++++|++++
T Consensus 238 ~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 238 LLKEGER---------LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HHHcCCc---------CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 1111110 0111223357889999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=318.30 Aligned_cols=262 Identities=23% Similarity=0.330 Sum_probs=197.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|++.+.||+|+||.||+|+++ +++.||+|.+.... ......+.+|+.+++.++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 57888999999999999999875 57899999986433 22334567899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
++ ++|.+++.... ..+++..+..++.|++.|++||| +.|++||||||+||++++++.++|+|||++.......
T Consensus 86 ~~-~~l~~~l~~~~---~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 86 LD-KDLKQYLDDCG---NSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred cc-cCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 97 58988887643 24788899999999999999999 8999999999999999999999999999997543221
Q ss_pred ccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC---------
Q 002155 837 THVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG--------- 906 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------- 906 (959)
.......+++.|+|||.+.+. .++.++||||+||++|||++|++||...... +....+.......
T Consensus 159 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
T cd07873 159 -KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE----EQLHFIFRILGTPTEETWPGIL 233 (301)
T ss_pred -CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHcCCCChhhchhhh
Confidence 112234568899999987653 5788999999999999999999998643211 1111111110000
Q ss_pred ---ccccccCccccCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 ---QAADVLDPTVLTA----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 ---~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.......+..... ........+.+++.+|++.||.+|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 234 SNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred ccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000000100000 011234457889999999999999999999873
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-35 Score=314.10 Aligned_cols=247 Identities=27% Similarity=0.396 Sum_probs=198.5
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.|+..+.||+|+||.||+|.+. +++.||+|.+.... ....+.+.+|+.++++++||||+++++++..+...++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3555678999999999999865 57889999886433 334567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++... .+++..+..++.|+++|+.||| +.|++|+||+|+||++++++.++++|||++.......
T Consensus 85 ~~~~L~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06642 85 GGGSALDLLKPG-----PLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred CCCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcc-
Confidence 999999988642 4788999999999999999999 8999999999999999999999999999997654322
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
.......++..|+|||.+.+..++.++|||||||++|||++|+.||...... .. ....... ..+.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~----~~----~~~~~~~-----~~~~-- 220 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM----RV----LFLIPKN-----SPPT-- 220 (277)
T ss_pred hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh----hH----HhhhhcC-----CCCC--
Confidence 1122345788999999999888999999999999999999999998543211 00 1111111 0111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........+.+++.+||+.+|++||++.+++++
T Consensus 221 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 221 --LEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred --CCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 112234567899999999999999999999984
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=309.72 Aligned_cols=251 Identities=30% Similarity=0.448 Sum_probs=192.0
Q ss_pred CeeccCCCeEEEEEEcC----CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceecccccee-cCCceEEEEEecc
Q 002155 685 NIIGDGGFGTVYKAALP----DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCS-FDEEKLLVYEYMV 758 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~ 758 (959)
+.||+|+||.||+|.+. ++..||+|.+... .....+.+.+|+.+++.++|||++++++++. .++..++||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999853 2457999988543 2344567888999999999999999999765 4556899999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc-
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET- 837 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~- 837 (959)
+|+|.++++.... ...+..+..++.|+++|++||| +.+++||||||+||++++++.+||+|||+++.......
T Consensus 81 ~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 81 HGDLRNFIRSETH---NPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred CCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 9999999976432 3567788899999999999999 88999999999999999999999999999975432111
Q ss_pred --cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCC-CCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 838 --HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKE-PTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 838 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
.......++..|+|||...+..++.++|||||||++|||++|+. ||... ....... .+..+. .+
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~----~~~~~~~----~~~~~~-----~~ 221 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV----DSFDITV----YLLQGR-----RL 221 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC----CHHHHHH----HHhcCC-----CC
Confidence 11112345678999999888889999999999999999999654 44321 1111111 111111 00
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
. .....+..+.+++.+||..+|++||++.++++.|+++..
T Consensus 222 ~----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 222 L----QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred C----CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 0 011123468899999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=306.69 Aligned_cols=250 Identities=26% Similarity=0.430 Sum_probs=199.3
Q ss_pred CCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc------hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK------TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
+|++.+.||+|+||+||+|...+++.+|+|.+.... ......+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 478899999999999999998889999999876322 22235578899999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.... .+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++|+|||.+....
T Consensus 81 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 81 MEFVPGGSISSILNRFG----PLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred EecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 99999999999997643 4788899999999999999999 8899999999999999999999999999987643
Q ss_pred ccc-----ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 834 ACE-----THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 834 ~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
... ........++..|+|||+..+..++.++||||+|+++||+++|..||..... ....... ...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-------~~~~~~~-~~~-- 223 (265)
T cd06631 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR-------LAAMFYI-GAH-- 223 (265)
T ss_pred hccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh-------HHHHHHh-hhc--
Confidence 211 1112234688899999999988899999999999999999999999854211 1111111 100
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
....+.. .......+.+++.+||+.+|++||++.|+++
T Consensus 224 -~~~~~~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 224 -RGLMPRL----PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred -cCCCCCC----CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0011111 1223456788999999999999999999976
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=314.24 Aligned_cols=253 Identities=26% Similarity=0.398 Sum_probs=197.2
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecC------C
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFD------E 748 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~------~ 748 (959)
+++.|++.+.||+|+||.||+|... +++.||+|.+.... .....+..|+.+++++ +|||++++++++... .
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 5677888999999999999999865 57899999986433 3345678899999998 699999999998643 4
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..++||||+++++|.+++.... ...+++..+..++.|++.|++||| +.+++|||+||+||++++++.++|+|||+
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~--~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCC
Confidence 5789999999999999998643 235788999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCC-----CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHh
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQ-----SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKM 903 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (959)
+....... .......|+..|+|||++. ...++.++||||+||++|||++|+.||...... ... ...
T Consensus 158 ~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~------~~~--~~~ 228 (272)
T cd06637 158 SAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM------RAL--FLI 228 (272)
T ss_pred ceeccccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH------HHH--HHH
Confidence 97653221 1223456889999999875 345788999999999999999999998542111 000 011
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.... .+.. ........+.+++.+||..||.+||++.+++++
T Consensus 229 ~~~~-----~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 229 PRNP-----APRL---KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred hcCC-----CCCC---CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 1100 0111 111233467899999999999999999999864
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=312.21 Aligned_cols=249 Identities=27% Similarity=0.379 Sum_probs=202.1
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|++.+.||.|+||.||+|++. +++.||+|.+.... ......+.+|+++++.++|||++++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36788899999999999999875 58899999986543 33445688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|.++++.. .+++..++.++.|++.|+.||| +.+++||||+|+||++++++.++++|||.++......
T Consensus 81 ~~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 81 CGGGSCLDLLKPG-----KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred eCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 9999999999764 5788999999999999999999 8999999999999999999999999999998765332
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......++..|+|||...+..++.++||||||+++|||++|..||...... . ....+.... .+..
T Consensus 153 -~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~-------~-~~~~~~~~~-----~~~~ 218 (274)
T cd06609 153 -SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM-------R-VLFLIPKNN-----PPSL 218 (274)
T ss_pred -cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH-------H-HHHHhhhcC-----CCCC
Confidence 1223346788999999998888999999999999999999999998643211 1 111111111 1111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... .....+.+++.+||..||++||++++++++
T Consensus 219 ~~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 219 EGN---KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred ccc---ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 111 134467889999999999999999999764
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=307.16 Aligned_cols=253 Identities=23% Similarity=0.357 Sum_probs=188.6
Q ss_pred eeccCCCeEEEEEEcCCC---CEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCC
Q 002155 686 IIGDGGFGTVYKAALPDG---KTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGS 761 (959)
Q Consensus 686 ~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 761 (959)
.||+|+||.||+|+..++ ..+++|.+.... ....+.+.+|+.+++.++||||+++++++......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 599999999999975433 345667665432 3345678899999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc-cccc
Q 002155 762 LDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE-THVS 840 (959)
Q Consensus 762 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~ 840 (959)
|.++++.........++..+..++.||++|++||| +.+++||||||+||+++.++.++|+|||++....... ....
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 99999875433345677788899999999999999 8899999999999999999999999999985432111 1112
Q ss_pred ccccccccccCCCcCCC-------CCCCCcCcchhHHHHHHHHHhC-CCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 841 TDIAGTFGYIPPEYGQS-------GRSTTRGDVYSFGVILLELVTG-KEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 841 ~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
....++..|+|||+... ..++.++||||||+++|||+++ ..||..... .+...... ........
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-------~~~~~~~~-~~~~~~~~ 230 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-------REVLNHVI-KDQQVKLF 230 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHH-hhcccccC
Confidence 23467889999998743 2457899999999999999974 567643211 11112212 12222233
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 954 (959)
+|..... ....+.+++..|| .+|++||+++++++.|.
T Consensus 231 ~~~~~~~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 231 KPQLELP----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCccCCC----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 3333222 3345667888899 67999999999998874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=313.59 Aligned_cols=257 Identities=25% Similarity=0.381 Sum_probs=204.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|++.+.||+|+||+||+|... +|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 56778889999999999999865 58899999876432 33456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|.++++... .+++..+..++.+++.|+.|||+ ..+++||||||+||+++.++.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 85 MDCGSLDRIYKKGG----PIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred CCCCCHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh-
Confidence 99999999987643 57889999999999999999994 358999999999999999999999999998654321
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCcccc----CCchHHHHHHHhhcCcccccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIE----GGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 912 (959)
......|+..|+|||++.+..++.++|||||||++|++++|+.||........ ...+.+++.......
T Consensus 158 --~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 229 (284)
T cd06620 158 --IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP------ 229 (284)
T ss_pred --ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc------
Confidence 11234688999999998888899999999999999999999999975433211 111222222221111
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 953 (959)
.+.. ...+....+.+++.+||+.||++||++.|++++.
T Consensus 230 ~~~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 230 PPRL---PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred CCCC---CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 0110 1122445788999999999999999999999863
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=311.88 Aligned_cols=239 Identities=23% Similarity=0.350 Sum_probs=186.3
Q ss_pred eeccCCCeEEEEEEcCC-------------------------CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceecc
Q 002155 686 IIGDGGFGTVYKAALPD-------------------------GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPL 740 (959)
Q Consensus 686 ~lg~G~~g~V~~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~ 740 (959)
.||+|+||.||+|.... ...||+|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 59999999999997421 13588998876555445678889999999999999999
Q ss_pred ccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC-
Q 002155 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF- 819 (959)
Q Consensus 741 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~- 819 (959)
++++..+...++||||+++|+|.++++... ..+++..+..++.|+++|++||| +.+|+||||||+||+++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEK---GRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLGL 155 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEeccCc
Confidence 999999999999999999999999987643 25788999999999999999999 89999999999999997543
Q ss_pred ------cEEEcccccccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHH-hCCCCCCCCCcccc
Q 002155 820 ------EAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELV-TGKEPTGPEFKDIE 891 (959)
Q Consensus 820 ------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell-tg~~p~~~~~~~~~ 891 (959)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++||||||+++||++ +|..||......
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-- 228 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS-- 228 (274)
T ss_pred ccCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH--
Confidence 4899999988643221 22356788999998765 56899999999999999995 688888543211
Q ss_pred CCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 002155 892 GGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954 (959)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 954 (959)
.... . ..... ..+ .. ....+.+++.+||+.+|++||++.++++.|+
T Consensus 229 --~~~~-~---~~~~~----~~~---~~----~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 229 --EKER-F---YEKKH----RLP---EP----SCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred --HHHH-H---HHhcc----CCC---CC----CChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1111 1 11100 001 11 1235788999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=320.95 Aligned_cols=259 Identities=31% Similarity=0.463 Sum_probs=203.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC--------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecCC
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP--------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDE 748 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 748 (959)
.+|++.+.||+|+||.||+|++. ++..||+|.+.... ....+++.+|+.+++++ +||||+++++++..++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46888999999999999999742 12368999887532 33456788999999999 7999999999999999
Q ss_pred ceEEEEEeccCCCHHHHHhhhcC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTG------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN 816 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 816 (959)
..++||||+++|+|.+++..... ....+++.++..++.|++.|++||| +.|++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEc
Confidence 99999999999999999976431 2235788999999999999999999 89999999999999999
Q ss_pred CCCcEEEcccccccccccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCc
Q 002155 817 EEFEAKVADFGLARLISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGN 894 (959)
Q Consensus 817 ~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~ 894 (959)
+++.+||+|||.++......... .....++..|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------- 241 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP------- 241 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-------
Confidence 99999999999997654322111 112234568999999998899999999999999999998 788875421
Q ss_pred hHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 895 LVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
... ....+....... . .......+.+++.+||+.+|++||++.|+++.|+++.
T Consensus 242 ~~~-~~~~~~~~~~~~-----~----~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 242 VEE-LFKLLKEGHRMD-----K----PANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HHH-HHHHHHcCCCCC-----C----CCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 111 122222211111 1 1123346888999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=327.21 Aligned_cols=261 Identities=21% Similarity=0.267 Sum_probs=197.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC---CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP---DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
..+|++.+.||+|+||.||+|... .+..||+|.+.... ...+|++++++++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-----~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-----TPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-----cHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 457999999999999999999753 35789999886432 3457999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+. +++.+++... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.++|+|||++.....
T Consensus 166 e~~~-~~l~~~l~~~----~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 166 PKYK-CDLFTYVDRS----GPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDA 237 (392)
T ss_pred hhcC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence 9995 5888888433 35889999999999999999999 89999999999999999999999999999976543
Q ss_pred cccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc----
Q 002155 835 CETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA---- 909 (959)
Q Consensus 835 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 909 (959)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......... .....+.+.+......
T Consensus 238 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~-~~l~~i~~~~~~~~~~~~~~ 316 (392)
T PHA03207 238 HPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSS-SQLRSIIRCMQVHPLEFPQN 316 (392)
T ss_pred ccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcH-HHHHHHHHHhccCccccCCc
Confidence 2221 122457899999999999999999999999999999999999998654322111 1111111111100000
Q ss_pred -------------cccCcccc-CCC--CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 910 -------------DVLDPTVL-TAD--SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 910 -------------~~~~~~~~-~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
....+... +.. .......+.+++.+|+..||++||++.|++.+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 317 GSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred cchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000000 000 01123456788999999999999999999875
|
|
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=310.24 Aligned_cols=256 Identities=21% Similarity=0.384 Sum_probs=201.5
Q ss_pred CCCCCCeeccCCCeEEEEEEcCC--CCEEEEEEcccc----------chhhHHHHHHHHHHHhc-CCCCceeccccceec
Q 002155 680 NFCKTNIIGDGGFGTVYKAALPD--GKTVAVKKLSQA----------KTQGHREFTAEMETLGK-VKHQNLVPLLGYCSF 746 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~----------~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~ 746 (959)
+|++.+.||+|+||.||+|.++. ++.+|+|.+... ......++..|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788899999999999999764 678999987532 12233456678887765 799999999999999
Q ss_pred CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 747 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
++..++||||+++++|.+++.........+++..++.++.|++.|+.|||+ ..+++||||+|+||+++.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecc
Confidence 999999999999999999986543334568899999999999999999993 368999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
|.+....... ......++..|+|||...+..++.++||||||+++||+++|+.||.... ..... ......
T Consensus 159 g~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~-------~~~~~-~~~~~~ 228 (269)
T cd08528 159 GLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN-------MLSLA-TKIVEA 228 (269)
T ss_pred cceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC-------HHHHH-HHHhhc
Confidence 9997654322 2234568889999999988889999999999999999999999985421 11111 111111
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
.. .+. ........+.+++.+||+.||++||++.|+..++++
T Consensus 229 ~~----~~~----~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 229 VY----EPL----PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred cC----CcC----CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 11 110 111233568889999999999999999999998864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=310.26 Aligned_cols=247 Identities=26% Similarity=0.391 Sum_probs=201.5
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.|+..+.||+|+||.||+|.+. +++.||+|.+.... ......+.+|+.++++++|||++++++++.++...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4667888999999999999875 58899999886443 344567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.++++.. .+++.++..++.|++.|++|+| +.+++|+||+|+||+++.++.++++|||++........
T Consensus 85 ~~~~L~~~i~~~-----~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 85 GGGSALDLLRAG-----PFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence 999999998753 3778889999999999999999 89999999999999999999999999999976543221
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......++..|+|||+..+..++.++||||||+++|||++|..||...... . ....... ...
T Consensus 157 -~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-------~-~~~~~~~---------~~~ 218 (277)
T cd06640 157 -KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM-------R-VLFLIPK---------NNP 218 (277)
T ss_pred -ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-------h-Hhhhhhc---------CCC
Confidence 222345788999999998888999999999999999999999998643211 0 0011110 001
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+.........+.+++.+||+.+|++||++.+++++
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 219 PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 12233456678899999999999999999999876
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=306.73 Aligned_cols=251 Identities=22% Similarity=0.345 Sum_probs=203.5
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+|+..++||+|+||.||.++.. +++.+|+|.+... ......++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 4788999999999999999854 6889999987643 244456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|.+++.... ...+++.++..++.|++.|++||| +.|++||||+|+||++++++.+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 81 ANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred cCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 99999999997653 235788999999999999999999 8899999999999999999999999999997664322
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
. ......+++.|+|||...+..++.++||||+|+++|||++|..||..... ...+... ..+.. .+
T Consensus 156 ~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-------~~~~~~~-~~~~~----~~-- 220 (256)
T cd08221 156 S-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-------LNLVVKI-VQGNY----TP-- 220 (256)
T ss_pred c-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHH-HcCCC----CC--
Confidence 1 22345688999999999888889999999999999999999999854211 1111111 11111 11
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 953 (959)
........+.+++.+||..+|++||++++++++.
T Consensus 221 ---~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 221 ---VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ---CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 1123345688899999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=319.43 Aligned_cols=237 Identities=24% Similarity=0.312 Sum_probs=186.0
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHH-HHHhcCCCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEM-ETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~-~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
++||+|+||.||+|+.. +++.||+|++.... ......+..|. .+++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999875 58899999986432 12233444454 467889999999999999999999999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
|+|..++.... .+++..+..++.||++||+||| +.||+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~ 152 (321)
T cd05603 81 GELFFHLQRER----CFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP-EET 152 (321)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC-CCc
Confidence 99998886543 4778889999999999999999 899999999999999999999999999998753221 122
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (959)
.....||+.|+|||.+.+..++.++||||+||++|||++|..||.... ... ....+..... ..+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-------~~~-~~~~i~~~~~-------~~~- 216 (321)
T cd05603 153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-------VSQ-MYDNILHKPL-------QLP- 216 (321)
T ss_pred cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC-------HHH-HHHHHhcCCC-------CCC-
Confidence 234568999999999998899999999999999999999999986431 111 1222221110 011
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 002155 920 DSKPMMLKMLRIAGDCLSDNPAMRPTML 947 (959)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rps~~ 947 (959)
......+.+++.+|++.||++||++.
T Consensus 217 --~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 217 --GGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred --CCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 11234577899999999999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=307.19 Aligned_cols=250 Identities=25% Similarity=0.401 Sum_probs=200.0
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceec-CCceEEEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSF-DEEKLLVYE 755 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e 755 (959)
+|++.+.||+|++|.||+|+.+ +++.||+|++.... ....+.+.+|++++++++|||++++++.+.. +...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788999999999999999865 57899999986432 3344568889999999999999999988754 445789999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++.... ...+++.++..++.|++.|++|+| +.|++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~l~~~~--~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 81 FCEGGDLYHKLKEQK--GKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ccCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 999999999998643 235789999999999999999999 899999999999999999999999999999766432
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
. .......+++.|+|||+..+..++.++||||+|+++||+++|+.||.... ...... ....+.. +
T Consensus 156 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~-------~~~~~~-~~~~~~~-----~- 220 (257)
T cd08223 156 C-DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD-------MNSLVY-RIIEGKL-----P- 220 (257)
T ss_pred C-CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-------HHHHHH-HHHhcCC-----C-
Confidence 2 22233467899999999999899999999999999999999999985421 111111 1111111 1
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.........+.+++.+||+.||++||++.+++++
T Consensus 221 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 221 ---PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ---CCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1122344578899999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=311.52 Aligned_cols=254 Identities=28% Similarity=0.452 Sum_probs=200.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|++.+.||+|+||.||+|++. +++.||+|.+... .......+.+|+.++++++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36788999999999999999976 6899999988653 333456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|..+++... ....+++..+..++.|++.|+.|||+ +.+++||||||+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 81 MDAGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred cCCCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 99999999987642 12357899999999999999999993 359999999999999999999999999998765321
Q ss_pred ccccccccccccccCCCcCCCC------CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSG------RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
......+++.|+|||.+.+. .++.++||||+||++|||++|+.||...... .....+ ..+....
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~~-~~~~~~~--- 226 (286)
T cd06622 157 --LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA----NIFAQL-SAIVDGD--- 226 (286)
T ss_pred --ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh----hHHHHH-HHHhhcC---
Confidence 12234578899999987544 3488999999999999999999998643111 111111 1111111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+ ....++...+.+++.+||+.+|++||++++++.+
T Consensus 227 --~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 227 --PP----TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred --CC----CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 01 1122355667889999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=311.48 Aligned_cols=256 Identities=26% Similarity=0.428 Sum_probs=202.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCC----EEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGK----TVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.+|++.+.||+|+||.||+|.++ +|. .||+|...... ......+.+|+..+++++|||++++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 56788999999999999999864 233 58999886554 3344678899999999999999999999876 78899
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.+||+|||.++..
T Consensus 86 v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHK---DNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred EEecCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccccc
Confidence 999999999999997654 24789999999999999999999 899999999999999999999999999999866
Q ss_pred cccccccc-ccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 833 SACETHVS-TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 833 ~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
........ ....++..|+|||......++.++|+||||+++||+++ |+.||..... ..+...+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~-- 229 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--------VEIPDLLEKGER-- 229 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--------HHHHHHHhCCCC--
Confidence 43222111 11223568999999888889999999999999999999 9999854311 112222222111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
...+ ..+...+.+++.+||..||.+||++.++++.|+++..
T Consensus 230 ~~~~-------~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 230 LPQP-------PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred CCCC-------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0011 1122357788999999999999999999999998743
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=319.35 Aligned_cols=260 Identities=26% Similarity=0.325 Sum_probs=194.2
Q ss_pred HHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecC-----
Q 002155 676 EATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD----- 747 (959)
Q Consensus 676 ~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 747 (959)
+..++|++.+.||+|+||.||+|.+. +++.||||++.... ......+.+|+.++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 45678999999999999999999864 67899999986532 22345577899999999999999999987543
Q ss_pred -CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 748 -EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 748 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
...+++||++ +++|.+++... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQ-----KLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCC
Confidence 3568999988 77998887643 4888999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH---
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK--- 902 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~--- 902 (959)
|+++.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+...
T Consensus 163 g~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~~~~~~~~ 234 (343)
T cd07878 163 GLARQADD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI----DQLKRIMEVVGT 234 (343)
T ss_pred ccceecCC----CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH----HHHHHHHHHhCC
Confidence 99976532 2234578999999998876 56899999999999999999999998542111 000000000
Q ss_pred --------hhcCccccccC--ccccCCC----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 --------MKKGQAADVLD--PTVLTAD----SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 --------~~~~~~~~~~~--~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+.......... +...... .......+.+++.+|++.||++|||++|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 235 PSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred CCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000000 0000000 00112346789999999999999999999865
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=313.30 Aligned_cols=262 Identities=26% Similarity=0.316 Sum_probs=196.0
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+|+..+.||+|+||.||+|++. +|+.||+|++.... ......+.+|++++++++|||++++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4778899999999999999875 68899999886432 22234577899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
++ +++.+++.... ..+++..++.++.||++|+.||| +.|++||||||+||+++.++.++|+|||.++......
T Consensus 81 ~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 81 CD-QDLKKYFDSCN---GDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred CC-CCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 97 48888876543 34889999999999999999999 8999999999999999999999999999997654321
Q ss_pred ccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc-------
Q 002155 837 THVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA------- 908 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------- 908 (959)
. ......++..|+|||.+.+. .++.++||||+||++|||++|+.|+....... .....+.........
T Consensus 154 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07839 154 R-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD---DQLKRIFRLLGTPTEESWPGVS 229 (284)
T ss_pred C-CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH---HHHHHHHHHhCCCChHHhHHhh
Confidence 1 12234578899999987664 46899999999999999999999975432211 111111111000000
Q ss_pred --ccc-cCcccc-----CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 --ADV-LDPTVL-----TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 --~~~-~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... ..+... ..........+.+++.+||+.||++|||+++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 230 KLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred hcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 000 000000 00111234567889999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=310.67 Aligned_cols=250 Identities=25% Similarity=0.397 Sum_probs=202.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
++|++.+.||+|+||.||+|... +++.||+|.+........+.+..|+.+++.++|||++++++++..++..++||||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 57888999999999999999864 67899999987555555567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++... .+++.++..++.|++.|+.||| +.|++|||+||+||+++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 99 AGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred CCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 999999999764 3678899999999999999999 89999999999999999999999999999876543222
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......+++.|+|||...+..++.++||||||+++|++++|..||........ +......+ .+.
T Consensus 171 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-------~~~~~~~~------~~~-- 234 (293)
T cd06647 171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-------LYLIATNG------TPE-- 234 (293)
T ss_pred -ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-------eeehhcCC------CCC--
Confidence 22334678899999998888899999999999999999999999965322100 00000000 000
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..........+.+++.+||+.+|++||++.+++.+
T Consensus 235 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 235 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11122344567889999999999999999999875
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=322.62 Aligned_cols=264 Identities=24% Similarity=0.255 Sum_probs=195.8
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecC------
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD------ 747 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 747 (959)
..++|+..+.||+|+||.||+|.+. .++.||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4568999999999999999999865 58899999986532 23345677899999999999999999988543
Q ss_pred CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccc
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFG 827 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 827 (959)
...++||||+++ ++.+++.. .+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~------~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh------cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCc
Confidence 346999999975 66666643 3678889999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCC-----------chH
Q 002155 828 LARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGG-----------NLV 896 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~-----------~~~ 896 (959)
+++.... ........||..|+|||++.+..++.++||||+||++|||++|+.||........-. +..
T Consensus 165 ~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (355)
T cd07874 165 LARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 242 (355)
T ss_pred ccccCCC--ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 9976532 222234578999999999998899999999999999999999999996432110000 000
Q ss_pred ----HHHHHHhhcCccc-cccCcccc--------CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 897 ----GWVFQKMKKGQAA-DVLDPTVL--------TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 897 ----~~~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..+.......... ....+... ..........+.+++.+|++.||++|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0000000000000 00000000 00111223467899999999999999999999985
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-35 Score=307.39 Aligned_cols=251 Identities=25% Similarity=0.377 Sum_probs=196.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEcc--ccchhhHHHHHHHHHHHhcCC-CCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLS--QAKTQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~--~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 754 (959)
...|++.+.||+||.++||++...+.+.||+|++. ..+.+...-|..|+..|.+++ |.+||++|+|-..++..|+||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 45688899999999999999998888889998765 345555677999999999995 899999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
|| ...+|..+++..... ...| .+..+..|++.++.++| ..||||.|+||.|+|+-. |.+||+|||.|..+..
T Consensus 440 E~-Gd~DL~kiL~k~~~~--~~~~-~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 440 EC-GDIDLNKILKKKKSI--DPDW-FLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQP 511 (677)
T ss_pred ec-ccccHHHHHHhccCC--CchH-HHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEEe-eeEEeeeechhcccCc
Confidence 96 566999999987632 2234 77889999999999999 899999999999999965 5999999999988765
Q ss_pred ccccc-cccccccccccCCCcCCCC-----------CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 835 CETHV-STDIAGTFGYIPPEYGQSG-----------RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 835 ~~~~~-~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
+.... ....+||+.|||||.+... +.++++||||+|||+|+|+.|++||+.-.. ....
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n----------~~aK 581 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN----------QIAK 581 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH----------HHHH
Confidence 44333 3456899999999965433 247899999999999999999999864110 1112
Q ss_pred hhcCccc--cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKGQAA--DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+...... +...|...+. ..+++++..|+.+||.+||+..+++++
T Consensus 582 l~aI~~P~~~Iefp~~~~~------~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 582 LHAITDPNHEIEFPDIPEN------DELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred HHhhcCCCccccccCCCCc------hHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 2211111 1111111111 128889999999999999999999864
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=336.01 Aligned_cols=257 Identities=25% Similarity=0.267 Sum_probs=206.0
Q ss_pred HHHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccc---cchhhHHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 674 ILEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQ---AKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 674 ~~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
+.-..++|++.++||+|+||.|..++.+ +++.||+|++.+ .+..+..-|..|-.+|..-+.+.|++++..|.++.+
T Consensus 70 lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~ 149 (1317)
T KOG0612|consen 70 LRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERY 149 (1317)
T ss_pred HhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccc
Confidence 3345678999999999999999999876 588999999876 345556678999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.|+||||++||||-.++.... ++++..+..++..|+-||.-+| +.|+|||||||+|||+|..|++||+|||.|
T Consensus 150 LYlVMdY~pGGDlltLlSk~~----~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsC 222 (1317)
T KOG0612|consen 150 LYLVMDYMPGGDLLTLLSKFD----RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSC 222 (1317)
T ss_pred eEEEEecccCchHHHHHhhcC----CChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchhH
Confidence 999999999999999997654 6899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccccccccccccccCCCcCC----C-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh
Q 002155 830 RLISACETHVSTDIAGTFGYIPPEYGQ----S-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (959)
-.+...+.-.....+|||.|.+||++. + +.|+..+|+||+||++|||+.|..||..+ .+++.....+.
T Consensus 223 lkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad-------slveTY~KIm~ 295 (1317)
T KOG0612|consen 223 LKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD-------SLVETYGKIMN 295 (1317)
T ss_pred HhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH-------HHHHHHHHHhc
Confidence 888766666667779999999999754 2 56899999999999999999999999653 22222222222
Q ss_pred cCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC---HHHHHHH
Q 002155 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT---MLHVLKF 952 (959)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~~ell~~ 952 (959)
....-..++ ..+......++|++.+. +|+.|.. ++++..+
T Consensus 296 hk~~l~FP~-------~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 296 HKESLSFPD-------ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred hhhhcCCCc-------ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 211111111 12233344455555444 7888887 8887654
|
|
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=317.44 Aligned_cols=198 Identities=26% Similarity=0.347 Sum_probs=159.9
Q ss_pred CCeeccCCCeEEEEEEcC---CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceec--CCceEEEEEecc
Q 002155 684 TNIIGDGGFGTVYKAALP---DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF--DEEKLLVYEYMV 758 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~ 758 (959)
+.+||+|+||.||+|+.+ ++..||+|.+..... ...+.+|++++++++||||+++++++.. +...++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 457999999999999865 357899998865432 2457789999999999999999998843 456799999986
Q ss_pred CCCHHHHHhhhc-----CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE----CCCCcEEEcccccc
Q 002155 759 NGSLDLWLRNRT-----GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL----NEEFEAKVADFGLA 829 (959)
Q Consensus 759 ~g~L~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfg~~ 829 (959)
+ ++.+++.... .....+++..++.++.|++.||+||| +.||+||||||+||++ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5 7877775321 12235788999999999999999999 8999999999999999 56679999999999
Q ss_pred ccccccccc--ccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 002155 830 RLISACETH--VSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEF 887 (959)
Q Consensus 830 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~ 887 (959)
+........ ......+|+.|+|||++.+ ..++.++||||+||++|||+||++||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~ 220 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence 866432211 1233468999999998876 457899999999999999999999997543
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=311.43 Aligned_cols=261 Identities=28% Similarity=0.424 Sum_probs=201.5
Q ss_pred cCHHHHHHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceec
Q 002155 669 LTLVHILEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSF 746 (959)
Q Consensus 669 ~~~~~~~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 746 (959)
.+..++..+.+.|++.+.||+|+||.||+|+.. +++.||+|.+.... ....++..|+.+++++ +|||++++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 344555556788999999999999999999874 58899999886543 2345678899999998 69999999998853
Q ss_pred ------CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc
Q 002155 747 ------DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE 820 (959)
Q Consensus 747 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 820 (959)
....++||||+++|+|.+++..... ..+++..+..++.|+++|++||| +.+++|||++|+||++++++.
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG--NALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAE 159 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCC
Confidence 4567999999999999999976442 34778888999999999999999 889999999999999999999
Q ss_pred EEEcccccccccccccccccccccccccccCCCcCC-----CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCch
Q 002155 821 AKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQ-----SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNL 895 (959)
Q Consensus 821 ~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~ 895 (959)
++|+|||++....... .......|++.|+|||.+. ...++.++||||+||++|||++|+.||......
T Consensus 160 ~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~------ 232 (282)
T cd06636 160 VKLVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM------ 232 (282)
T ss_pred EEEeeCcchhhhhccc-cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH------
Confidence 9999999987553211 1123346889999999875 346788999999999999999999998542211
Q ss_pred HHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 896 VGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......... ..+ ......+...+.+++.+||+.||.+||++.|++++
T Consensus 233 -~~~~~~~~~------~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 233 -RALFLIPRN------PPP---KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred -hhhhhHhhC------CCC---CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 001110000 001 11112344578899999999999999999999863
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=312.79 Aligned_cols=263 Identities=25% Similarity=0.325 Sum_probs=196.3
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.++++++|||++++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999875 68899999886432 22345678899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
++ +++.+++..... ...+++..+..++.|+++||+||| +.|++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 81 LS-MDLKKYLDSLPK-GQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred CC-CCHHHHHhcCCC-CCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 97 589888865432 245889999999999999999999 8999999999999999999999999999997654221
Q ss_pred ccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc------
Q 002155 837 THVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA------ 909 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 909 (959)
.......+++.|+|||.+.+. .++.++||||+||++|||+||++||........ ... ...........
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~ 230 (285)
T cd07861 156 -RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ---LFR-IFRILGTPTEDVWPGVT 230 (285)
T ss_pred -ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH---HHH-HHHHhCCCChhhhhcch
Confidence 112233568899999987654 578899999999999999999999864321100 000 00000000000
Q ss_pred ---------cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 910 ---------DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 910 ---------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..................+.+++.+||+.||++|||+.+++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 231 SLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred hhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000000000011234567789999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=318.96 Aligned_cols=262 Identities=19% Similarity=0.253 Sum_probs=192.8
Q ss_pred CCCeeccC--CCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 683 KTNIIGDG--GFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 683 ~~~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
+.++||+| +||+||+++.+ +|+.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35689999 78899999865 68999999986542 233455778999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++|++.+++..... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.++++|||.+........
T Consensus 82 ~~~~l~~~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 82 AYGSAKDLICTHFM--DGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred CCCcHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 99999999976432 24788999999999999999999 89999999999999999999999999987543321111
Q ss_pred c------ccccccccccccCCCcCCC--CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHh------
Q 002155 838 H------VSTDIAGTFGYIPPEYGQS--GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKM------ 903 (959)
Q Consensus 838 ~------~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~------ 903 (959)
. ......++..|+|||++.+ ..++.++||||+||++|||++|+.||........ .........
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~ 233 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM---LLEKLNGTVPCLLDT 233 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH---HHHHhcCCccccccc
Confidence 0 0112246678999999875 4588999999999999999999999964321100 000000000
Q ss_pred --------hcCccc--------c-----ccCccc----cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 904 --------KKGQAA--------D-----VLDPTV----LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 904 --------~~~~~~--------~-----~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...... . ...+.. ...........+.+++.+||+.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 234 TTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred cchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 000000 0 000000 001122344578899999999999999999999873
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=312.13 Aligned_cols=261 Identities=27% Similarity=0.371 Sum_probs=201.5
Q ss_pred HHHHHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecC--
Q 002155 672 VHILEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFD-- 747 (959)
Q Consensus 672 ~~~~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-- 747 (959)
.++..++++|++.+.||+|+||.||+|... +++.+|+|++.... .....+.+|+.+++++ +|||++++++++...
T Consensus 15 ~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~ 93 (291)
T cd06639 15 ESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADK 93 (291)
T ss_pred ccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccc
Confidence 444456788999999999999999999875 68899999886432 2235677899999998 799999999988643
Q ss_pred ---CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEc
Q 002155 748 ---EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVA 824 (959)
Q Consensus 748 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 824 (959)
+..++||||+++++|.++++........+++..++.++.|++.|++||| +.+++||||||+||+++.++.+||+
T Consensus 94 ~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~kl~ 170 (291)
T cd06639 94 LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVKLV 170 (291)
T ss_pred cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEe
Confidence 3579999999999999998754333346889999999999999999999 8899999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcCCCC-----CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHH
Q 002155 825 DFGLARLISACETHVSTDIAGTFGYIPPEYGQSG-----RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWV 899 (959)
Q Consensus 825 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 899 (959)
|||.+........ ......++..|+|||.+... .++.++||||+||++|||++|+.||...... ..+
T Consensus 171 dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~-------~~~ 242 (291)
T cd06639 171 DFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV-------KTL 242 (291)
T ss_pred ecccchhcccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH-------HHH
Confidence 9999876543221 12234678899999987543 3688999999999999999999998643111 111
Q ss_pred HHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 900 FQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. +......... ........+.+++.+||+.||++||++.|++++
T Consensus 243 ~~-~~~~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 243 FK-IPRNPPPTLL-------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HH-HhcCCCCCCC-------cccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 11 1111111111 112233468899999999999999999999864
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=283.22 Aligned_cols=248 Identities=25% Similarity=0.422 Sum_probs=195.5
Q ss_pred CCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCC-CCceeccccceecCCceEEEEEeccC
Q 002155 683 KTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
...-||.|..|.||+++.+ +|..+|||.+... ..++.+++...+.++..-. +|+||+.+|||..+...++.||.|..
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~ 175 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST 175 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH
Confidence 3556999999999999875 5899999998764 3455667777887776664 89999999999999999999999854
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
..+.+++... .++++.-+-++...+++||.||.+ .+||+|||+||+|||+|+.|.+|+||||.+.++-. ...
T Consensus 176 -C~ekLlkrik---~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd--SkA 247 (391)
T KOG0983|consen 176 -CAEKLLKRIK---GPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD--SKA 247 (391)
T ss_pred -HHHHHHHHhc---CCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeec--ccc
Confidence 6777776655 358888888899999999999986 67999999999999999999999999999987653 233
Q ss_pred cccccccccccCCCcCCCC---CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 840 STDIAGTFGYIPPEYGQSG---RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.+..+|.+.|||||.+.-. .|+.++||||||+.++|+.||..||.....+. + +...+.... |+.
T Consensus 248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF---e----~ltkvln~e------PP~ 314 (391)
T KOG0983|consen 248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDF---E----VLTKVLNEE------PPL 314 (391)
T ss_pred cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccH---H----HHHHHHhcC------CCC
Confidence 3445789999999987543 68899999999999999999999996543332 1 222222211 111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+ ....+...+.+++..|+.+|+.+||.+.+++++
T Consensus 315 L~-~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 315 LP-GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CC-cccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 11 112256678888999999999999999999875
|
|
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=306.92 Aligned_cols=240 Identities=23% Similarity=0.409 Sum_probs=188.2
Q ss_pred CeeccCCCeEEEEEEcCC--------CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 685 NIIGDGGFGTVYKAALPD--------GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+.||+|+||.||+|.... ...||+|.+........+.+.+|+.+++.++|||++++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999997642 234888887655555556788899999999999999999999998999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc--------EEEccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE--------AKVADFGL 828 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--------~kl~Dfg~ 828 (959)
+++|+|.++++... ..+++..+..++.||+.|++||| +.||+||||||+||+++.++. ++++|||.
T Consensus 81 ~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~ 154 (258)
T cd05078 81 VKFGSLDTYLKKNK---NLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI 154 (258)
T ss_pred CCCCcHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEeccccc
Confidence 99999999998654 25788899999999999999999 899999999999999987765 69999999
Q ss_pred ccccccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCC-CCCCCCCccccCCchHHHHHHHhhcC
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGK-EPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
+..... .....++..|+|||++.+. .++.++||||+|+++||+++|. .||...... ... ......
T Consensus 155 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~-------~~~-~~~~~~ 221 (258)
T cd05078 155 SITVLP-----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ-------KKL-QFYEDR 221 (258)
T ss_pred ccccCC-----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH-------HHH-HHHHcc
Confidence 865432 1224578899999998764 5789999999999999999985 554321110 000 011110
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 954 (959)
+... ......+.+++.+||+.||++|||++++++.|+
T Consensus 222 -------~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 222 -------HQLP----APKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -------ccCC----CCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0011 112246789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=306.20 Aligned_cols=251 Identities=31% Similarity=0.517 Sum_probs=200.4
Q ss_pred CCCCCeeccCCCeEEEEEEcCC-----CCEEEEEEccccchh-hHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 681 FCKTNIIGDGGFGTVYKAALPD-----GKTVAVKKLSQAKTQ-GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
|++.+.||+|+||.||+|++.+ +..||+|++...... ....+..|+++++.++|+||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567889999999999998753 378999998765433 5667889999999999999999999999989999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++++|.+++..... ..+++.+++.++.|++.|++||| +.+++||||||+||++++++.++++|||.+.....
T Consensus 81 e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 81 EYMEGGDLLDYLRKNRP--KELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred eccCCCCHHHHHHhhhh--ccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceeccc
Confidence 99999999999976442 12789999999999999999999 89999999999999999999999999999977654
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
..........+++.|+|||...+..++.++||||+|+++|||++ |.+||.... ... +.+........
T Consensus 156 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~----~~~----~~~~~~~~~~~---- 223 (258)
T smart00219 156 DDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS----NEE----VLEYLKKGYRL---- 223 (258)
T ss_pred ccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC----HHH----HHHHHhcCCCC----
Confidence 32222222336789999999888889999999999999999999 777775421 111 11222221111
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 953 (959)
.. .......+.+++.+|+..||++|||+.|+++.|
T Consensus 224 -~~----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 -PK----PENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -CC----CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 11 111345688899999999999999999998764
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=327.15 Aligned_cols=373 Identities=26% Similarity=0.373 Sum_probs=283.3
Q ss_pred CCccccEEecCCCccc-ccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCce
Q 002155 40 NWNQMESLLLSSNQFI-GKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQ 118 (959)
Q Consensus 40 ~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 118 (959)
=|+.++-.|+++|.+. +..|.....++.++.|.|...++. .+|+.++.+.+|++|.++||++. .+.+.+..++.|+.
T Consensus 5 VLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRs 82 (1255)
T KOG0444|consen 5 VLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRS 82 (1255)
T ss_pred ccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHH
Confidence 3566788999999998 569999999999999999999998 89999999999999999999999 57788899999999
Q ss_pred eeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCccc
Q 002155 119 LVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLK 198 (959)
Q Consensus 119 L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 198 (959)
+.+.+|++... -+|..+..+..|..|+|++|+++ ..|..+.+.+++-.|+||+|+|.
T Consensus 83 v~~R~N~LKns----------------------GiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie 139 (1255)
T KOG0444|consen 83 VIVRDNNLKNS----------------------GIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE 139 (1255)
T ss_pred HhhhccccccC----------------------CCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc
Confidence 99999988632 12333444444555555555554 78888999999999999999999
Q ss_pred ccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCc
Q 002155 199 GHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPS 278 (959)
Q Consensus 199 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 278 (959)
.+...-|.+|+.|-.||||+|++. .+|..+..|..|++|+|++|.+....-..+..|++|+.|.+++.+=+
T Consensus 140 tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRT-------- 210 (1255)
T KOG0444|consen 140 TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRT-------- 210 (1255)
T ss_pred cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccch--------
Confidence 655567889999999999999999 67778999999999999999986443334445556666666654321
Q ss_pred chhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCC
Q 002155 279 SYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIP 358 (959)
Q Consensus 279 ~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 358 (959)
...+|.++..+.+|..+|+|.|.+. ..|
T Consensus 211 ---------------------------------------------------l~N~Ptsld~l~NL~dvDlS~N~Lp-~vP 238 (1255)
T KOG0444|consen 211 ---------------------------------------------------LDNIPTSLDDLHNLRDVDLSENNLP-IVP 238 (1255)
T ss_pred ---------------------------------------------------hhcCCCchhhhhhhhhccccccCCC-cch
Confidence 0024445555666666666666666 566
Q ss_pred CCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccC-CCchhhhccc
Q 002155 359 SEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDG-QLPSSLSNIL 437 (959)
Q Consensus 359 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~l~~l~ 437 (959)
+.+..+.+|+.|+||+|+|+ .+......+.+|++|+|+.|+++ .+|.+++.+++|+.|.+.+|+++- -+|++++.+.
T Consensus 239 ecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~ 316 (1255)
T KOG0444|consen 239 ECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLI 316 (1255)
T ss_pred HHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhh
Confidence 66666666666666666666 44445566677777888888877 677888888888888888887763 3677888888
Q ss_pred ccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEe
Q 002155 438 NLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLD 517 (959)
Q Consensus 438 ~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 517 (959)
+|+.+...+|.++ ..|+.++.+..|+.|.|+.|++. .+|+++.-++.|+.||
T Consensus 317 ~Levf~aanN~LE---------------------------lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLD 368 (1255)
T KOG0444|consen 317 QLEVFHAANNKLE---------------------------LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLD 368 (1255)
T ss_pred hhHHHHhhccccc---------------------------cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceee
Confidence 8888877777776 45677777888888888888887 6788888888888888
Q ss_pred CCCCcCCCCCC
Q 002155 518 VSRNRLCGQIP 528 (959)
Q Consensus 518 Ls~N~l~~~~p 528 (959)
|..|.=--.+|
T Consensus 369 lreNpnLVMPP 379 (1255)
T KOG0444|consen 369 LRENPNLVMPP 379 (1255)
T ss_pred ccCCcCccCCC
Confidence 88886443444
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=322.50 Aligned_cols=260 Identities=24% Similarity=0.268 Sum_probs=195.3
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecC------
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD------ 747 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 747 (959)
..++|++.+.||+|+||.||+|.+. .++.||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3468999999999999999999865 58899999986532 23345677899999999999999999987543
Q ss_pred CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccc
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFG 827 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 827 (959)
...|+||||+++ ++.+++.. .+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh------cCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCC
Confidence 346999999965 77776643 3677889999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH-----
Q 002155 828 LARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK----- 902 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~----- 902 (959)
+++.... ........+|..|+|||++.+..++.++||||+||++|||++|+.||...... .....+...
T Consensus 172 ~a~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~----~~~~~~~~~~~~~~ 245 (364)
T cd07875 172 LARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI----DQWNKVIEQLGTPC 245 (364)
T ss_pred CccccCC--CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHhcCCCC
Confidence 9976532 12223457899999999999999999999999999999999999999643211 000000000
Q ss_pred --------------hhcCccccc-----cCcccc----CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 --------------MKKGQAADV-----LDPTVL----TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 --------------~~~~~~~~~-----~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......... ..+... ..........+.+++.+|++.||++|||+.|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000000 000000 00011123467899999999999999999999875
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=308.91 Aligned_cols=251 Identities=31% Similarity=0.513 Sum_probs=196.3
Q ss_pred CeeccCCCeEEEEEEcCC-------CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 685 NIIGDGGFGTVYKAALPD-------GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+.||+|+||.||+|++.+ ++.+|+|.+.... ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 369999999999998642 2579999876533 23456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcC---CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC-----cEEEccccc
Q 002155 757 MVNGSLDLWLRNRTG---SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF-----EAKVADFGL 828 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-----~~kl~Dfg~ 828 (959)
+++++|.+++..... ....+++.++..++.|++.|++||| +.+++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 999999999976432 1234788999999999999999999 88999999999999999877 899999999
Q ss_pred cccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 829 ARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 829 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
+......... ......++..|+|||++.++.++.++|||||||++|||++ |..||..... ... ...+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~----~~~----~~~~~~~ 229 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN----QEV----LQHVTAG 229 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH----HHH----HHHHhcC
Confidence 9765332211 1122345678999999998899999999999999999998 9999853211 111 1111111
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
... .........+.+++.+||..+|++||++.++++.|++
T Consensus 230 ~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 230 GRL---------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred Ccc---------CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 100 1112234567899999999999999999999999864
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=313.09 Aligned_cols=262 Identities=25% Similarity=0.326 Sum_probs=199.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
++|++.+.||+|+||.||+|+++ +|+.||+|++.... ....+.+.+|+.++++++|||++++++++..+...++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888999999999999999976 58999999886432 2233557889999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|++++.+..+..... .+++..+..++.|++.|++||| +.|++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 81 YCDHTVLNELEKNPR----GVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred ccCccHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 999988888775432 4789999999999999999999 899999999999999999999999999999876432
Q ss_pred cccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh----------
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK---------- 904 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---------- 904 (959)
.. ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||....... ....+.....
T Consensus 154 ~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07847 154 GD-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD----QLYLIRKTLGDLIPRHQQIF 228 (286)
T ss_pred cc-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHhCCCChHHhhhc
Confidence 21 2223457889999998765 457899999999999999999999986432211 0000100000
Q ss_pred -cCcc-ccccCccccCCC-----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 905 -KGQA-ADVLDPTVLTAD-----SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 905 -~~~~-~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.... .....+...... .......+.+++.+||+.||++||++.|++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 229 STNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred ccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 0000 000001100000 11234568899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=306.53 Aligned_cols=247 Identities=28% Similarity=0.456 Sum_probs=197.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
++|++.+.||+|+||.||+|.. +++.||+|.+.... ....+.+|+.++++++|||++++++++..+ ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4688899999999999999975 67889999986533 235688999999999999999999988654 5799999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+++|.+++..... ..+++..++.++.|++.|+.||| +.|++||||||+||+++.++.++|+|||.+......
T Consensus 82 ~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~--- 153 (254)
T cd05083 82 KGNLVNFLRTRGR--ALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG--- 153 (254)
T ss_pred CCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceecccc---
Confidence 9999999976532 35788999999999999999999 899999999999999999999999999998754321
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......+..|+|||.+.+..++.++||||+|+++|||++ |+.||..... .. .......+... .
T Consensus 154 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-------~~-~~~~~~~~~~~---~---- 217 (254)
T cd05083 154 -VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL-------KE-VKECVEKGYRM---E---- 217 (254)
T ss_pred -CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH-------HH-HHHHHhCCCCC---C----
Confidence 112234568999999988889999999999999999998 8888854211 11 12222221111 1
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
........+.+++.+||+.+|++||++++++..|++
T Consensus 218 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 218 --PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred --CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 112234567899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=305.32 Aligned_cols=257 Identities=28% Similarity=0.410 Sum_probs=204.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|++.+.||+|+||.||+|... ++..+|+|++.... ......+.+|+++++.++|+|++++++.+..++..++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 47889999999999999999865 67899999986433 23456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|.++++.... ...+++..+..++.|++.|++||| +.|++||||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 81 LSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred cCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 999999999976432 135788999999999999999999 8999999999999999999999999999997765432
Q ss_pred cc---ccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 837 TH---VSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 837 ~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
.. ......++..|+|||.+... .++.++||||||+++|||++|+.||...... ..........
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-------~~~~~~~~~~------ 223 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-------KVLMLTLQND------ 223 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-------hhHHHHhcCC------
Confidence 22 12334688899999988776 7899999999999999999999998643211 1111111111
Q ss_pred CccccC-CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 913 DPTVLT-ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 913 ~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+.... .........+.+++.+||+.||++||++++++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 224 PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 011100 0112445678899999999999999999999864
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=311.04 Aligned_cols=248 Identities=26% Similarity=0.372 Sum_probs=198.1
Q ss_pred CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccC
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
|.....||+|+||.||+|... ++..||+|++........+.+.+|+..++.++|||++++++.+..++..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 334567999999999999864 6889999998765555566788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
++|.+++... .+++.++..++.|++.|++||| +.+++||||||+||++++++.++|+|||++....... ..
T Consensus 104 ~~L~~~~~~~-----~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~-~~ 174 (292)
T cd06658 104 GALTDIVTHT-----RMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV-PK 174 (292)
T ss_pred CcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc-cc
Confidence 9999988542 3788999999999999999999 8899999999999999999999999999987553222 12
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (959)
.....++..|+|||...+..++.++||||+|+++||+++|+.||...... . ....+... ..+...
T Consensus 175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-------~-~~~~~~~~-----~~~~~~-- 239 (292)
T cd06658 175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL-------Q-AMRRIRDN-----LPPRVK-- 239 (292)
T ss_pred CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------H-HHHHHHhc-----CCCccc--
Confidence 22346889999999998888999999999999999999999998642111 1 11111111 011100
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 920 DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........+.+++.+||..||.+|||++|++++
T Consensus 240 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 240 DSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred cccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 111233457788999999999999999999975
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=308.45 Aligned_cols=261 Identities=26% Similarity=0.366 Sum_probs=202.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecC--CceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD--EEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 754 (959)
++|+..+.||.|++|.||+|.+. +++.+|+|.+.... .....++.+|+++++.++||||++++++|... ...++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46778899999999999999975 57899999886533 23456688999999999999999999988543 4689999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++++|.+++.........+++..+..++.|++.|++||| +.|++|+||+|+||++++++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999999988654433456788999999999999999999 89999999999999999999999999999865432
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCcc-ccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKD-IEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.. .....++..|+|||.+.+..++.++||||+|+++|+|++|..||...... ....+...+ +........ .
T Consensus 158 ~~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~-~ 229 (287)
T cd06621 158 SL---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSY----IVNMPNPEL-K 229 (287)
T ss_pred cc---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHH----HhcCCchhh-c
Confidence 11 12345788999999998889999999999999999999999999754221 111111111 111111000 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
............+.+++.+||+.+|++|||+.|++++
T Consensus 230 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 230 --DEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred --cCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 0111112345678899999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=305.52 Aligned_cols=250 Identities=23% Similarity=0.374 Sum_probs=193.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-----hhhHHHHHHHHHHHhcCCCCceeccccceec--CCce
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-----TQGHREFTAEMETLGKVKHQNLVPLLGYCSF--DEEK 750 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~ 750 (959)
.+|+..++||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++.. +...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 46888999999999999999865 58899999875321 2234567889999999999999999998865 3567
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
+++|||+++++|.+++.... .+++...+.++.|++.|++||| +.+++||||||+||+++.++.++|+|||++.
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG----ALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 89999999999999997643 4788899999999999999999 8999999999999999999999999999987
Q ss_pred ccccccc--cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 831 LISACET--HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 831 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
....... .......++..|+|||.+.+..++.++||||+||++||+++|+.||..... ...+.......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~-------~~~~~~~~~~~-- 225 (266)
T cd06651 155 RLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA-------MAAIFKIATQP-- 225 (266)
T ss_pred ccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch-------HHHHHHHhcCC--
Confidence 5532111 111224578899999999888899999999999999999999999864211 11111111111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..+.. +......+..++ +||..+|++||+++|++++
T Consensus 226 ---~~~~~----~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 226 ---TNPQL----PSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred ---CCCCC----chhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 01111 122233455555 6888999999999999863
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=304.65 Aligned_cols=247 Identities=26% Similarity=0.367 Sum_probs=200.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.+.|+.-++||+|+||.||-+..+ +|+-||.|++.+.. .........|-.++.++..+.||.+-..|..++..|+|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 467888999999999999999765 68999999875432 22334466899999999999999998889999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
+..|.||+|.-++...+. ..+++..+..+|.+|+.||++|| ..+||+||+||+|||+|+.|+|+|+|.|+|..+.
T Consensus 264 LtlMNGGDLkfHiyn~g~--~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGN--PGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EEeecCCceeEEeeccCC--CCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 999999999988877653 45899999999999999999999 8999999999999999999999999999998876
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
... .....+||.+|||||++..+.|+...|+||+||++|||+.|+.||....+.+.. +.+.+.+...
T Consensus 339 ~g~--~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~----eEvdrr~~~~------- 405 (591)
T KOG0986|consen 339 EGK--PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKR----EEVDRRTLED------- 405 (591)
T ss_pred CCC--ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhH----HHHHHHHhcc-------
Confidence 433 334558999999999999999999999999999999999999999764433221 1122222221
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCC
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT 945 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 945 (959)
+. ..+..+......+....+.+||++|..
T Consensus 406 ~~---ey~~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 406 PE---EYSDKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred hh---hcccccCHHHHHHHHHHHccCHHHhcc
Confidence 11 122344455667777789999999973
|
|
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=314.56 Aligned_cols=256 Identities=25% Similarity=0.413 Sum_probs=199.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCC----EEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGK----TVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
.++|+..+.||+|+||.||+|.+. +|. .||+|.+.... .....++.+|+.+++.++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-~~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS-PTIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-CCce
Confidence 356788899999999999999864 343 57888876543 2333467889999999999999999998865 4567
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+|+||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||.++.
T Consensus 85 ~v~e~~~~g~l~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHK---DNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred eeehhcCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEcccccccc
Confidence 9999999999999987643 34788899999999999999999 89999999999999999999999999999986
Q ss_pred cccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 832 ISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 832 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
........ .....++..|+|||.+.+..++.++||||||+++||+++ |+.||..... ......+..+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~ 230 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--------REIPDLLEKGERL 230 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHCCCCC
Confidence 54322211 112335678999999988889999999999999999998 8889854211 1111222221110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
... ..+...+.+++.+||..+|++||+++++++.++++.
T Consensus 231 -----~~~----~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~ 269 (303)
T cd05110 231 -----PQP----PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA 269 (303)
T ss_pred -----CCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 001 112345778999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=305.18 Aligned_cols=253 Identities=25% Similarity=0.412 Sum_probs=200.5
Q ss_pred CCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccc------hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAK------TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
+|+..+.||+|+||.||+|+. .+++.||+|++.... ....+.+..|++++++++|||++++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999986 468999999986432 1234568899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC-cEEEcccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF-EAKVADFGLARL 831 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~ 831 (959)
||||+++++|.+++.... ++++..+..++.|++.|++||| +.|++||||+|+||+++.++ .++|+|||.+..
T Consensus 81 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG----AFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred EEeccCCCcHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 999999999999997643 5788999999999999999999 88999999999999998776 599999999976
Q ss_pred ccccccc---ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 832 ISACETH---VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 832 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
....... ......++..|+|||...+..++.++||||+|+++|++++|..||..... ...............
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~- 228 (268)
T cd06630 154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH----SNHLALIFKIASATT- 228 (268)
T ss_pred cccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC----cchHHHHHHHhccCC-
Confidence 6432111 11234578899999998888899999999999999999999999854211 111111111111100
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+.........+.+++.+|++.+|++||++.+++++
T Consensus 229 --------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 229 --------APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred --------CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 111223345678889999999999999999999863
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=312.89 Aligned_cols=262 Identities=26% Similarity=0.332 Sum_probs=201.1
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+|++.+.||+|+||.||+|.+. +|+.||+|++.... ......+.+|+.++++++|||++++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788899999999999999875 68999999986543 33346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+ +++|.+++.... ..+++.+++.++.|+++|++||| +.|++|+||||+||+++.++.++++|||.+.......
T Consensus 81 ~-~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 81 M-PSDLSEVLRDEE---RPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred c-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 9 999999987644 45889999999999999999999 8899999999999999999999999999998765433
Q ss_pred ccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc-------
Q 002155 837 THVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA------- 908 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------- 908 (959)
........++..|+|||.+.+. .++.++||||+|+++|||++|.+||..... ......+.........
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND----IEQLAIVFRTLGTPNEETWPGLT 229 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH----HHHHHHHHHHcCCCChHHHhhcc
Confidence 2223344688899999987654 468999999999999999999877754321 1111111111111000
Q ss_pred -----ccccCcccc----CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 -----ADVLDPTVL----TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 -----~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.....+... .....+....+.+++.+|++.||++||++++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000 00011233678899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=305.52 Aligned_cols=254 Identities=28% Similarity=0.411 Sum_probs=203.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|+..+.||+|+||.||+|.++ +++.||+|.+.... .....++.+|++.+++++||||+++++++..+...++||||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 36778889999999999999876 68899999886543 34456688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT-PHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
+++++|.+++.... ..+++..+..++.|++.|++|+| + .|++||||||+||++++++.++|+|||.+......
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 81 MDGGSLDKILKEVQ---GRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred cCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 99999999998753 35788999999999999999999 7 89999999999999999999999999998765322
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
.. ....++..|+|||...+..++.++||||+|+++|++++|+.||...... .......+.. ..... .+.
T Consensus 155 ~~---~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~-~~~~~-----~~~ 223 (265)
T cd06605 155 LA---KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP--PDGIFELLQY-IVNEP-----PPR 223 (265)
T ss_pred Hh---hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc--cccHHHHHHH-HhcCC-----CCC
Confidence 11 1256788999999998889999999999999999999999998654221 1111121111 11110 011
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. + .......+.++|.+||..||++||++.+++++
T Consensus 224 ~-~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 224 L-P--SGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred C-C--hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 1 1 11145568899999999999999999999864
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-34 Score=302.79 Aligned_cols=248 Identities=27% Similarity=0.425 Sum_probs=199.9
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-----hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-----TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
+|+..++||+|+||.||+|... +++.||+|.+.... ....+.+.+|+++++.++|||++++++++..+...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4778899999999999999876 78999999876432 23446788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.++++... .+++..+..++.|++.|++||| +.|++|+||+|+||+++.++.+||+|||.+....
T Consensus 81 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 81 LELVPGGSLAKLLKKYG----SFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred EEecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 99999999999997643 4788899999999999999999 8899999999999999999999999999987654
Q ss_pred cccccccccccccccccCCCcCCCCC-CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGR-STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
... ......++..|+|||...... ++.++|+||+|+++|++++|+.||..... .............
T Consensus 154 ~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~---- 220 (258)
T cd06632 154 EFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG-------VAAVFKIGRSKEL---- 220 (258)
T ss_pred ccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH-------HHHHHHHHhcccC----
Confidence 322 223446888999999887666 89999999999999999999999865321 1111111111110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+. .+......+.+++.+||+.+|++||++.+++++
T Consensus 221 -~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 221 -PP----IPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred -CC----cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 11 111234567789999999999999999999864
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=309.69 Aligned_cols=252 Identities=24% Similarity=0.371 Sum_probs=194.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHH-HHhcCCCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEME-TLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
++|++.+.||+|+||.||+|+++ +|+.||+|++.... .....++..|+. .++..+|||++++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46888999999999999999876 68999999886542 222334555555 4666789999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP-HIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
|++ |+|.++++........+++..++.++.|++.|++||| +. +++||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 996 6898888765434456899999999999999999999 65 999999999999999999999999999976532
Q ss_pred ccccccccccccccccCCCcCCC----CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQS----GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
. .......++..|+|||.+.+ ..++.++|+||+||++|||++|+.||...... ...........
T Consensus 157 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~---- 224 (283)
T cd06617 157 S--VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP------FQQLKQVVEEP---- 224 (283)
T ss_pred c--cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC------HHHHHHHHhcC----
Confidence 1 11223457889999998754 45688999999999999999999998542111 11111111110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
.+... .......+.+++.+||..+|++||++.++++
T Consensus 225 --~~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 225 --SPQLP---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred --CCCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11110 1123456889999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=312.65 Aligned_cols=266 Identities=26% Similarity=0.361 Sum_probs=198.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
++|++.+.||+|+||.||+|.++ +++.||+|++..... ...+.+.+|+++++.++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888999999999999999976 588999998764322 234567889999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|++++++..+..... .+++.++..++.|++.|++||| +.|++|||++|+||++++++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 81 FVDHTVLDDLEKYPN----GLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred cCCccHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 999999988776432 4789999999999999999999 889999999999999999999999999998765432
Q ss_pred cccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHH-------HHHHHhhcCc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVG-------WVFQKMKKGQ 907 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~-------~~~~~~~~~~ 907 (959)
. .......++..|+|||+..+ ..++.++||||||+++|||++|++||.............. ..........
T Consensus 154 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07846 154 G-EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNP 232 (286)
T ss_pred c-cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccch
Confidence 2 22233457889999998765 4478899999999999999999998854321100000000 0000000000
Q ss_pred c-ccccCccccC-----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 A-ADVLDPTVLT-----ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~-~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. .....+.... .........+.+++.+||+.+|++||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 233 LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 0 0000000000 0011234568899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=330.65 Aligned_cols=260 Identities=22% Similarity=0.246 Sum_probs=189.9
Q ss_pred HHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCC------CceeccccceecC-
Q 002155 676 EATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKH------QNLVPLLGYCSFD- 747 (959)
Q Consensus 676 ~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~~~~~~~~~- 747 (959)
..+++|++.++||+|+||+||+|.+. +++.||||+++... ....++..|+++++.++| ++++++++++..+
T Consensus 126 ~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~ 204 (467)
T PTZ00284 126 VSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET 204 (467)
T ss_pred cCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC
Confidence 35678999999999999999999865 57889999986432 223345567777777654 4588888888654
Q ss_pred CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEECCCC-------
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT-PHIIHRDIKASNILLNEEF------- 819 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlk~~Nill~~~~------- 819 (959)
.+.|+|||++ +++|.+++.... .+++..+..++.||+.||+||| . .|||||||||+|||++.++
T Consensus 205 ~~~~iv~~~~-g~~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~~~~~~ 276 (467)
T PTZ00284 205 GHMCIVMPKY-GPCLLDWIMKHG----PFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENILMETSDTVVDPVT 276 (467)
T ss_pred ceEEEEEecc-CCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEecCCccccccc
Confidence 5688999988 678988887643 5888999999999999999999 5 5999999999999998765
Q ss_pred ---------cEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc
Q 002155 820 ---------EAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI 890 (959)
Q Consensus 820 ---------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~ 890 (959)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 277 ~~~~~~~~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~- 351 (467)
T PTZ00284 277 NRALPPDPCRVRICDLGGCCDER----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL- 351 (467)
T ss_pred ccccCCCCceEEECCCCccccCc----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-
Confidence 49999999885432 2233467899999999999999999999999999999999999999653211
Q ss_pred cCCchHHHHHHHhhc---------------------CccccccCcccc-------CCCCHHHHHHHHHHHHHcccCCCCC
Q 002155 891 EGGNLVGWVFQKMKK---------------------GQAADVLDPTVL-------TADSKPMMLKMLRIAGDCLSDNPAM 942 (959)
Q Consensus 891 ~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~ 942 (959)
+....+...... +......++... ..........+.+++.+||+.||++
T Consensus 352 ---~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~ 428 (467)
T PTZ00284 352 ---EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQK 428 (467)
T ss_pred ---HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhh
Confidence 111101000000 000000000000 0000011245779999999999999
Q ss_pred CCCHHHHHHH
Q 002155 943 RPTMLHVLKF 952 (959)
Q Consensus 943 Rps~~ell~~ 952 (959)
|||++|++++
T Consensus 429 R~ta~e~L~H 438 (467)
T PTZ00284 429 RLNARQMTTH 438 (467)
T ss_pred CCCHHHHhcC
Confidence 9999999874
|
|
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=312.67 Aligned_cols=263 Identities=25% Similarity=0.315 Sum_probs=200.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
++|++.+.||+|+||.||+|+++ +++.||+|++.... ......+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999876 58899999886432 2334678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|++++.+..+..... .+++.+++.++.|++.|++||| ..+++|||++|+||++++++.+||+|||.+......
T Consensus 81 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 81 YVERTLLELLEASPG----GLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred cCCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 999877776665432 4788999999999999999999 889999999999999999999999999999876543
Q ss_pred cccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH-----------h
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK-----------M 903 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~-----------~ 903 (959)
.........++..|+|||++.+. .++.++||||+|+++|+|++|++||...... +........ .
T Consensus 154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07833 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI----DQLYLIQKCLGPLPPSHQELF 229 (288)
T ss_pred ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCCHHHhhhc
Confidence 33233345678899999998887 7899999999999999999999998643211 000000000 0
Q ss_pred hcCccccc-cCccccC------CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 904 KKGQAADV-LDPTVLT------ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 904 ~~~~~~~~-~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........ ..+.... .........+.+++.+||..+|++||++++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 230 SSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 00000000 0000000 0111235678999999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=305.53 Aligned_cols=255 Identities=23% Similarity=0.351 Sum_probs=203.2
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceec--CCceEEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSF--DEEKLLVY 754 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~ 754 (959)
+|++.+.||+|+||.||+|... +++.||+|.+... .....+.+..|++++++++|||++++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4778899999999999999864 6889999988643 23345568889999999999999999997754 34678999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC--CCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF--TPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||+++++|.+++.........+++..++.++.|++.|++|+|..+ +.+++||||+|+||+++.++.+|++|||.+...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999999875444457899999999999999999999432 568999999999999999999999999999876
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
..... ......+++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ..+.+.+..+..
T Consensus 161 ~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~---- 227 (265)
T cd08217 161 GHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--------LQLASKIKEGKF---- 227 (265)
T ss_pred cCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--------HHHHHHHhcCCC----
Confidence 53222 12334688999999999888899999999999999999999999864321 112222222211
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+.........+.+++.+|++.+|++||++.+|+++
T Consensus 228 -----~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 228 -----RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -----CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 11122344578899999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=305.41 Aligned_cols=253 Identities=26% Similarity=0.391 Sum_probs=187.3
Q ss_pred eeccCCCeEEEEEEcCC---CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCC
Q 002155 686 IIGDGGFGTVYKAALPD---GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGS 761 (959)
Q Consensus 686 ~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 761 (959)
.||+|+||+||+|...+ ...+|+|.+.... ......+.+|++.++.++||||+++++++......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997543 3568888776433 2334567889999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCC-ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc-
Q 002155 762 LDLWLRNRTGS-LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV- 839 (959)
Q Consensus 762 L~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~- 839 (959)
|.+++...... ....++..+..++.|++.|++||| +.+|+||||||+||++++++.+||+|||++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 99999875432 233467788999999999999999 8999999999999999999999999999986543221111
Q ss_pred cccccccccccCCCcCC-------CCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 840 STDIAGTFGYIPPEYGQ-------SGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.....++..|+|||+.. ...++.++||||+||++|||++ |..||..... .+ ........ .....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~----~~---~~~~~~~~-~~~~~ 230 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD----EQ---VLKQVVRE-QDIKL 230 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH----HH---HHHHHhhc-cCccC
Confidence 12234567899999754 3456889999999999999999 6777753211 11 11111111 11111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 954 (959)
..+.. .......+.+++..|| .||++||++++|++.|.
T Consensus 231 ~~~~~----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 231 PKPQL----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCcc----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 12211 1223345566777888 59999999999998863
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-34 Score=301.66 Aligned_cols=250 Identities=24% Similarity=0.414 Sum_probs=202.0
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+|++.+.||+|+||.||+++.. +|+.||+|.+... .....+++.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4788899999999999999865 6889999998643 233445788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|.+++..... ..+++.++..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||.+.......
T Consensus 81 ~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 81 CEGGDLYKKINAQRG--VLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred CCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 999999999876432 24688899999999999999999 8899999999999999999999999999997654321
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
. ......|++.|+|||+..+..++.++|||||||++|++++|+.||... ...+.+..... +.. +
T Consensus 156 ~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-------~~~~~~~~~~~-~~~-----~-- 219 (256)
T cd08218 156 E-LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG-------NMKNLVLKIIR-GSY-----P-- 219 (256)
T ss_pred h-hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC-------CHHHHHHHHhc-CCC-----C--
Confidence 1 122345788999999998888999999999999999999999998542 11122222211 111 1
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.........+.+++.+||+.+|++||++.+++++
T Consensus 220 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 220 --PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred --CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1122334568899999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=301.94 Aligned_cols=238 Identities=24% Similarity=0.418 Sum_probs=187.6
Q ss_pred CeeccCCCeEEEEEEcCCCC-----------EEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 685 NIIGDGGFGTVYKAALPDGK-----------TVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
+.||+|+||.||+|.+.+.. .+++|.+...... ...+.+|+.+++.++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 46999999999999976432 5777876544333 5678899999999999999999999887 778999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC-------cEEEccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF-------EAKVADF 826 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-------~~kl~Df 826 (959)
|||+++|+|.++++.... .+++..+..++.|++.|++||| +.|++||||||+||+++.++ .+|++||
T Consensus 79 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 79 EEYVKFGPLDVFLHREKN---NVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred EEcCCCCcHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCC
Confidence 999999999999987542 5788999999999999999999 89999999999999999887 7999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCC--CCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHh
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSG--RSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKM 903 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 903 (959)
|++..... .....++..|+|||++.+. .++.++||||+|+++||+++ |..||...... .... ..
T Consensus 153 g~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~----~~~~----~~ 219 (259)
T cd05037 153 GIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS----EKER----FY 219 (259)
T ss_pred Cccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch----hHHH----HH
Confidence 99976532 1223567789999998776 78999999999999999999 46666442111 1111 11
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 954 (959)
.... . .+ ... ...+.+++.+||..+|++||++.++++.|+
T Consensus 220 ~~~~--~--~~----~~~---~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 220 QDQH--R--LP----MPD---CAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred hcCC--C--CC----CCC---chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1000 0 00 000 157889999999999999999999998873
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=307.35 Aligned_cols=256 Identities=29% Similarity=0.409 Sum_probs=201.1
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecCC------
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDE------ 748 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~------ 748 (959)
++++|++.+.||+|+||.||+|+.+ +++.+|+|++..... ..+++.+|+.+++++ +||||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 5688999999999999999999975 578999998865433 346788999999999 7999999999986544
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..++||||+++++|.++++........+++..++.++.|++.|++||| +.+++||||+|+||++++++.++|+|||.
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCcc
Confidence 479999999999999998764433346889999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCC-----CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHh
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQS-----GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKM 903 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (959)
+....... .......++..|+|||++.. ..++.++||||+|+++|++++|..||...... ....+ +
T Consensus 160 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~-~ 230 (275)
T cd06608 160 SAQLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM-------RALFK-I 230 (275)
T ss_pred ceecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-------HHHHH-h
Confidence 87653322 22233468889999998653 34678999999999999999999998642111 11111 1
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.... .+. ..........+.+++.+||..||++|||+.+++++
T Consensus 231 ~~~~-----~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 231 PRNP-----PPT--LKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred hccC-----CCC--CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1111 111 11122345578899999999999999999999863
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-34 Score=305.49 Aligned_cols=254 Identities=28% Similarity=0.445 Sum_probs=197.8
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch----------hhHHHHHHHHHHHhcCCCCceeccccceecCC
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT----------QGHREFTAEMETLGKVKHQNLVPLLGYCSFDE 748 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 748 (959)
+|...+.||+|+||.||+|... +|+.||+|.+..... ...+.+.+|+.+++.++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4677889999999999999865 688999998753211 11245778999999999999999999999999
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..++||||+++++|.++++... .+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++++|||.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG----RFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeeccc
Confidence 9999999999999999997653 5788899999999999999999 88999999999999999999999999999
Q ss_pred ccccccccc-cccccccccccccCCCcCCCCC--CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhc
Q 002155 829 ARLISACET-HVSTDIAGTFGYIPPEYGQSGR--STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK 905 (959)
Q Consensus 829 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (959)
++....... .......++..|+|||...... ++.++||||+|+++||+++|..||..... .....+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~ 227 (272)
T cd06629 155 SKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA-------IAAMFKLGNK 227 (272)
T ss_pred cccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch-------HHHHHHhhcc
Confidence 976432111 1122345788999999877654 78999999999999999999999853211 1111111111
Q ss_pred CccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. . .+.............+.+++.+||..+|++||++.+++++
T Consensus 228 ~-~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 228 R-S----APPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred c-c----CCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 1 0 1111111122345678889999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-35 Score=322.03 Aligned_cols=240 Identities=25% Similarity=0.321 Sum_probs=185.1
Q ss_pred eccCCCeEEEEEEcC-CCCEEEEEEccccch---hhHHHHHHHHHHHhcC---CCCceeccccceecCCceEEEEEeccC
Q 002155 687 IGDGGFGTVYKAALP-DGKTVAVKKLSQAKT---QGHREFTAEMETLGKV---KHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 687 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
||+|+||+||+|+.. +++.||||++..... .....+..|..++... +||+|+++++++..++..|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999875 589999999864321 1223344566666555 699999999999999999999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
|+|.+++.... .+++..+..++.||++|++||| +.||+||||||+||+++.++.++|+|||++....... ..
T Consensus 81 g~L~~~l~~~~----~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~ 152 (330)
T cd05586 81 GELFWHLQKEG----RFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KT 152 (330)
T ss_pred ChHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CC
Confidence 99999987643 5788999999999999999999 8999999999999999999999999999987543211 22
Q ss_pred cccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccC
Q 002155 840 STDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (959)
.....||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ......+..+... .+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~--------~~~~~~i~~~~~~---~~---- 217 (330)
T cd05586 153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT--------QQMYRNIAFGKVR---FP---- 217 (330)
T ss_pred ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH--------HHHHHHHHcCCCC---CC----
Confidence 2345789999999987654 479999999999999999999999864311 1112222221110 00
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCC----CHHHHHH
Q 002155 919 ADSKPMMLKMLRIAGDCLSDNPAMRP----TMLHVLK 951 (959)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rp----s~~ell~ 951 (959)
.......+.+++.+||+.||++|| ++.++++
T Consensus 218 --~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 218 --KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred --CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 011234567889999999999998 5666665
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-34 Score=308.76 Aligned_cols=246 Identities=24% Similarity=0.355 Sum_probs=197.2
Q ss_pred CCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCC
Q 002155 683 KTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGS 761 (959)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 761 (959)
....||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|||++++++++..++..++||||+++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 3457999999999999865 689999999865544455678899999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccccc
Q 002155 762 LDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVST 841 (959)
Q Consensus 762 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 841 (959)
|..++... .+++..++.++.|++.|++||| +.+++||||||+||+++.++.++|+|||++....... ....
T Consensus 105 L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~ 175 (297)
T cd06659 105 LTDIVSQT-----RLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRK 175 (297)
T ss_pred HHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc-cccc
Confidence 99987653 3788999999999999999999 8899999999999999999999999999987553321 1223
Q ss_pred cccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCC
Q 002155 842 DIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADS 921 (959)
Q Consensus 842 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (959)
...++..|+|||++.+..++.++||||+||++|||++|+.||...... . ....+....... ....
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-------~-~~~~~~~~~~~~-------~~~~ 240 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV-------Q-AMKRLRDSPPPK-------LKNA 240 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------H-HHHHHhccCCCC-------cccc
Confidence 356889999999998888999999999999999999999998642111 1 111111111000 0011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 922 KPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 922 ~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......+.+++.+||+.+|++||++++++++
T Consensus 241 ~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 241 HKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred CCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 1223457789999999999999999999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=306.89 Aligned_cols=257 Identities=26% Similarity=0.396 Sum_probs=197.8
Q ss_pred CCCCCeeccCCCeEEEEEEcC----CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCC------
Q 002155 681 FCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE------ 748 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 748 (959)
|++.++||+|+||.||+|.++ +++.||||++... .....+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567889999999999999753 3688999988653 2334566889999999999999999999875432
Q ss_pred ceEEEEEeccCCCHHHHHhhhc--CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRT--GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
..++++||+.+|++.+++.... .....+++..+..++.|++.|++||| +.||+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcc
Confidence 2378999999999998875432 12234788899999999999999999 889999999999999999999999999
Q ss_pred cccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhh
Q 002155 827 GLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMK 904 (959)
Q Consensus 827 g~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (959)
|.++........ ......+++.|++||......++.++|||||||++||+++ |.+||..... .... ..+.
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~----~~~~----~~~~ 229 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN----SEIY----NYLI 229 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH----HHHH----HHHH
Confidence 999865432211 1122345678999999988889999999999999999999 7888753211 1111 1111
Q ss_pred cCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.... .. ........+.+++.+||+.+|++||++.++++.|++++
T Consensus 230 ~~~~-----~~----~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~~ 273 (273)
T cd05074 230 KGNR-----LK----QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELIW 273 (273)
T ss_pred cCCc-----CC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 1110 00 01123357889999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-35 Score=333.73 Aligned_cols=253 Identities=26% Similarity=0.409 Sum_probs=193.3
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecC-------
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD------- 747 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------- 747 (959)
--++|+..++||+||||.||+++.+ ||+.||||++... .......+.+|+.++++++|||||+++..+.+.
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 3457888899999999999999977 8999999998643 344456688999999999999999988643110
Q ss_pred --------------------------------------------------------------------------------
Q 002155 748 -------------------------------------------------------------------------------- 747 (959)
Q Consensus 748 -------------------------------------------------------------------------------- 747 (959)
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence
Q ss_pred --------------------------------CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHH
Q 002155 748 --------------------------------EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL 795 (959)
Q Consensus 748 --------------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~L 795 (959)
...||-||||+..++.++++...... .....|+++.+|++|++|+
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~---~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS---QRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch---hhHHHHHHHHHHHHHHHHH
Confidence 01378899999988888887754211 3578899999999999999
Q ss_pred HhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc-----------------cccccccccccccccccCCCcCCCC
Q 002155 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS-----------------ACETHVSTDIAGTFGYIPPEYGQSG 858 (959)
Q Consensus 796 H~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~ 858 (959)
| +.|+|||||||.||+++++..|||+|||+|+... .......+..+||.-|+|||+..+.
T Consensus 714 H---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~ 790 (1351)
T KOG1035|consen 714 H---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT 790 (1351)
T ss_pred H---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence 9 8999999999999999999999999999998721 0111122456899999999987765
Q ss_pred C---CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHc
Q 002155 859 R---STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDC 935 (959)
Q Consensus 859 ~---~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 935 (959)
. |+.|+||||+||+++||+. ||+...+.. .+...++.+..... +....+....=.++|++|
T Consensus 791 ~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa-------~iL~~LR~g~iP~~------~~f~~~~~~~e~slI~~L 854 (1351)
T KOG1035|consen 791 SSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERA-------SILTNLRKGSIPEP------ADFFDPEHPEEASLIRWL 854 (1351)
T ss_pred ccccccchhhhHHHHHHHHHHhc---cCCchHHHH-------HHHHhcccCCCCCC------cccccccchHHHHHHHHH
Confidence 5 9999999999999999986 576543321 12333443322211 112333444456889999
Q ss_pred ccCCCCCCCCHHHHHH
Q 002155 936 LSDNPAMRPTMLHVLK 951 (959)
Q Consensus 936 l~~dP~~Rps~~ell~ 951 (959)
++.||.+||||.|++.
T Consensus 855 l~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 855 LSHDPSKRPTATELLN 870 (1351)
T ss_pred hcCCCccCCCHHHHhh
Confidence 9999999999999985
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-35 Score=287.54 Aligned_cols=248 Identities=23% Similarity=0.339 Sum_probs=198.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh---hHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ---GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|+..+++|+|.||+|-.++-+ +|+.||+|++++.... +...-..|-++++..+||.+..+-..|+..+..|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 467889999999999999999865 7899999999876433 333445799999999999999998889999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+.||.|.-++.... .+++..+..+-..|+.||.||| +++||+||+|.+|.++|.||++||+|||+|+.--
T Consensus 247 MeyanGGeLf~HLsrer----~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRER----VFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI 319 (516)
T ss_pred EEEccCceEeeehhhhh----cccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhcc
Confidence 99999999988886643 5788888899999999999999 8999999999999999999999999999997543
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.. ...+..++|||.|.|||++....|+.++|+|.+||++|||++|+.||.....+ .+. +-+.. .+.-.
T Consensus 320 ~~-g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~----kLF----eLIl~---ed~kF 387 (516)
T KOG0690|consen 320 KY-GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE----KLF----ELILM---EDLKF 387 (516)
T ss_pred cc-cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh----HHH----HHHHh---hhccC
Confidence 22 23345689999999999999999999999999999999999999999653221 111 11111 11112
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLK 951 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~ 951 (959)
|.-.++ +...++...+.+||.+|. ++.||.+
T Consensus 388 Pr~ls~-------eAktLLsGLL~kdP~kRLGgGpdDakEi~~ 423 (516)
T KOG0690|consen 388 PRTLSP-------EAKTLLSGLLKKDPKKRLGGGPDDAKEIMR 423 (516)
T ss_pred CccCCH-------HHHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence 222222 344566667889999997 5666654
|
|
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-34 Score=302.50 Aligned_cols=249 Identities=24% Similarity=0.378 Sum_probs=199.7
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+|+..+.||+|+||.||+|... +++.+|+|.+... .......+..|+++++.++|||++++++++..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4778899999999999999865 6889999988643 233456788999999999999999999999988999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC-CcEEEcccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE-FEAKVADFGLARLISAC 835 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~~~~~~ 835 (959)
+++++|.+++.... ...+++..+..++.|++.|++||| +.|++||||+|+||+++++ +.++++|||.+......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 81 APGGTLAEYIQKRC--NSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred CCCCCHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 99999999998754 235788999999999999999999 8999999999999999865 46899999999866432
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
. ......++..|+|||...+..++.++||||+|+++|+|++|+.||..... ...+....... ...
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~-------~~~~~~~~~~~-~~~----- 220 (256)
T cd08220 156 S--KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL-------PALVLKIMSGT-FAP----- 220 (256)
T ss_pred c--cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch-------HHHHHHHHhcC-CCC-----
Confidence 1 12234678899999999888899999999999999999999999854311 11111111111 000
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........+.+++.+||+.||++|||+.|++++
T Consensus 221 ----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 221 ----ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred ----CCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 011234467899999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=302.54 Aligned_cols=250 Identities=22% Similarity=0.321 Sum_probs=195.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-----hhhHHHHHHHHHHHhcCCCCceeccccceecC--Cce
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-----TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD--EEK 750 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 750 (959)
++|++.++||+|+||.||.|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47888999999999999999875 58899999875321 22345678899999999999999999988653 457
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++++|.+++.... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||.+.
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~ 154 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG----ALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASK 154 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCcccc
Confidence 89999999999999987643 4678888999999999999999 8899999999999999999999999999987
Q ss_pred ccccccc--cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 831 LISACET--HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 831 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
....... .......++..|+|||...+..++.++|||||||++||+++|+.||..... ...+.......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~-- 225 (265)
T cd06652 155 RLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA-------MAAIFKIATQP-- 225 (265)
T ss_pred ccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch-------HHHHHHHhcCC--
Confidence 6532111 112234578899999998888899999999999999999999999853210 11111111110
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. +..+......+.+++.+|+. +|++||+++|++++
T Consensus 226 ---~~----~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 226 ---TN----PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred ---CC----CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 01 11223344567788888985 99999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=301.06 Aligned_cols=251 Identities=31% Similarity=0.492 Sum_probs=200.1
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+|...+.||+|+||.||+|... +++.||+|.+..... ...+.+..|+.+++.++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4778899999999999999865 688999999875443 3567788999999999999999999999989999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|.+++.... .+++..+..++.|++.|++||| +.|++||||+|+||++++++.+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 81 CSGGTLEELLEHGR----ILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred CCCCcHHHHHhhcC----CCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 99999999997643 4678899999999999999999 8999999999999999999999999999997764332
Q ss_pred ccccc---cccccccccCCCcCCCCC---CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 837 THVST---DIAGTFGYIPPEYGQSGR---STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 837 ~~~~~---~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
..... ...++..|+|||++.+.. ++.++||||||+++||+++|+.||...... ...... ....
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~------~~~~~~-~~~~---- 222 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE------FQIMFH-VGAG---- 222 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch------HHHHHH-HhcC----
Confidence 22211 345788999999988766 889999999999999999999998643111 111111 1111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
..+.. + ........+.+++.+||+.+|++||++.|++.
T Consensus 223 -~~~~~-~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 223 -HKPPI-P-DSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred -CCCCC-C-cccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 01111 1 11122445678999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=307.89 Aligned_cols=254 Identities=21% Similarity=0.301 Sum_probs=197.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.+++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 46888999999999999999875 57899999886543 223456778999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++++|.+++.... .+++..+..++.|++.|++|+| +.+++||||||+||+++.++.++++|||.++....
T Consensus 81 e~~~g~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 81 EYVEGGDCATLLKNIG----ALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred ecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 9999999999997643 5788999999999999999999 88999999999999999999999999999863210
Q ss_pred c--------------cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHH
Q 002155 835 C--------------ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 835 ~--------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (959)
. .........++..|+|||.+.+..++.++|+|||||++||+++|..||..... .. +.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~-------~~-~~ 225 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-------EE-LF 225 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HH-HH
Confidence 0 00011123567899999998888899999999999999999999999854211 11 12
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 954 (959)
........ ..+.. .......+.+++.+||+.||++||++.++.+.++
T Consensus 226 ~~~~~~~~---~~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 226 GQVISDDI---EWPEG----DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred HHHHhccc---CCCCc----cccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 22211111 01111 1123345788999999999999999655554444
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=305.19 Aligned_cols=247 Identities=28% Similarity=0.415 Sum_probs=199.0
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
-|+..+.||+|+||.||+|.+. +++.||+|.+.... ......+.+|+.++++++||||+++++++..++..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 3667889999999999999864 68899999876433 333456889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++... .+++..+..++.|++.|+.||| +.|++|+||+|+||+++.++.++++|||++.......
T Consensus 85 ~~~~l~~~i~~~-----~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06641 85 GGGSALDLLEPG-----PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred CCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccch-
Confidence 999999998643 4788999999999999999999 8999999999999999999999999999987654321
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
.......++..|+|||...+..++.++||||+||++|++++|..||...... . ....+.... .+.
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~----~----~~~~~~~~~-----~~~-- 220 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM----K----VLFLIPKNN-----PPT-- 220 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH----H----HHHHHhcCC-----CCC--
Confidence 1122345788999999998888899999999999999999999998542111 1 111111110 011
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........+.+++.+||+.+|++||++.+++++
T Consensus 221 --~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 221 --LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred --CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 112234567789999999999999999999985
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=310.44 Aligned_cols=263 Identities=25% Similarity=0.339 Sum_probs=195.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh-hHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ-GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|++.+.||+|+||.||+|+.+ +++.||+|.+...... ....+.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888999999999999999876 6889999998654322 234467899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++ +|.+++.... ..+++..+..++.|+++|+.||| +.+++||||||+||+++.++.+||+|||.++......
T Consensus 85 ~~~-~L~~~~~~~~---~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 85 LDT-DLKQYMDDCG---GGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred CCC-CHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 975 9999887644 25788999999999999999999 8999999999999999999999999999986543211
Q ss_pred ccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc------
Q 002155 837 THVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA------ 909 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 909 (959)
. ......++..|+|||+..+ ..++.++||||+|+++|||++|+.||....... +........+......
T Consensus 158 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07844 158 K-TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE---DQLHKIFRVLGTPTEETWPGVS 233 (291)
T ss_pred c-cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH---HHHHHHHHhcCCCChhhhhhhh
Confidence 1 1122346789999998765 457899999999999999999999986432110 0000011110000000
Q ss_pred ------c----ccCccccCCC--CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 910 ------D----VLDPTVLTAD--SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 910 ------~----~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ...+...... .......+.+++.+|++.+|++||++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred hccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 0 0000000000 00112566789999999999999999998763
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=312.69 Aligned_cols=253 Identities=25% Similarity=0.326 Sum_probs=201.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch---hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT---QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|+..+.||+|+||.||+|... +++.||+|.+..... ...+.+..|+++++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999876 489999999865432 24456888999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+.+++|.+++.... ...+++..+..++.|++.|++||| +.|++||||||+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 81 DYCPGGELFRLLQRQP--GKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EecCCCCHHHHHHhCC--CCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 9999999999987543 245888999999999999999999 89999999999999999999999999999875432
Q ss_pred cccc----------------------------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 002155 835 CETH----------------------------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 886 (959)
Q Consensus 835 ~~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~ 886 (959)
.... ......|+..|+|||+..+..++.++||||||+++|+|++|..||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 1110 111235788999999998888999999999999999999999998643
Q ss_pred CccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC----HHHHHHH
Q 002155 887 FKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT----MLHVLKF 952 (959)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~ell~~ 952 (959)
... .......... ............+.+++.+||..||++||+ ++|++.+
T Consensus 236 ~~~-------~~~~~~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 236 NRD-------ETFSNILKKE---------VTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred chH-------HHHHHHhcCC---------ccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 211 0011111110 000111114557889999999999999999 7777764
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=304.93 Aligned_cols=248 Identities=24% Similarity=0.392 Sum_probs=197.7
Q ss_pred CCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEcccc-chhhHHHHHHHHHHHhcCC---CCceeccccceecCCceEEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQA-KTQGHREFTAEMETLGKVK---HQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~ 754 (959)
.|+..+.||+|+||.||+|.+ .+++.||+|.+... ......++.+|+.++++++ |||++++++++..+...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 467788999999999999986 46899999998653 3344566888999999986 999999999999889999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++++|.++++.. .+++..++.++.|++.|+.||| +.|++||||+|+||++++++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 82 EYAEGGSVRTLMKAG-----PIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred ecCCCCcHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence 999999999998653 4789999999999999999999 89999999999999999999999999999987654
Q ss_pred ccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.. .......|+..|+|||...++ .++.++||||||+++|+|++|..||...... ..+. ..... ..
T Consensus 154 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-------~~~~-~~~~~-----~~ 219 (277)
T cd06917 154 NS-SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-------RAMM-LIPKS-----KP 219 (277)
T ss_pred Cc-cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-------hhhh-ccccC-----CC
Confidence 32 222334688899999987654 4688999999999999999999998643111 1110 00000 01
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+.... ......+.+++.+||+.||++||++.+++++
T Consensus 220 ~~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 220 PRLED---NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCCCc---ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 11111 1144568889999999999999999999764
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=299.46 Aligned_cols=252 Identities=30% Similarity=0.455 Sum_probs=205.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch-hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|++.+.||+|++|.||+|+.. +++.||+|++..... .....+.+|+..+++++|||++++++++..+...++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 46888999999999999999876 589999999876543 3456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT-PHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
+++++|.+++... ..+++..++.++.|+++|++|+| + .+++||||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 81 MDGGSLADLLKKV----GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred cCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 9999999999765 35788999999999999999999 8 99999999999999999999999999999866432
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
... .....++..|+|||...+..++.++||||||+++|+|++|..||..... ....... ..+..... +
T Consensus 154 ~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~----~~~~~~~-~~~~~~~~-----~- 221 (264)
T cd06623 154 LDQ-CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ----PSFFELM-QAICDGPP-----P- 221 (264)
T ss_pred CCc-ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc----cCHHHHH-HHHhcCCC-----C-
Confidence 222 1234578899999999988899999999999999999999999865432 1111111 11111110 1
Q ss_pred ccCCCCHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKP-MMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~-~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..... ....+.+++.+||..+|++||++.+++++
T Consensus 222 ---~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 222 ---SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred ---CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11112 44678899999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-34 Score=309.51 Aligned_cols=261 Identities=26% Similarity=0.331 Sum_probs=197.6
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh-----hHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ-----GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
+|++.+.||+|+||.||+|... +++.||+|++...... ....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778889999999999999865 6899999998754322 234567899999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+ +|+|.++++... ..+++..++.++.|+++||+||| +.|++||||+|+||+++.++.++|+|||++....
T Consensus 81 ~e~~-~~~L~~~i~~~~---~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS---IVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred Eccc-CCCHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 9999 889999997643 35889999999999999999999 8999999999999999999999999999997764
Q ss_pred cccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc-----
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ----- 907 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----- 907 (959)
..... .....+++.|+|||.+.+ ..++.++||||+||++|||++|.+||....+ ...............
T Consensus 154 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 228 (298)
T cd07841 154 SPNRK-MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD----IDQLGKIFEALGTPTEENWP 228 (298)
T ss_pred CCCcc-ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc----HHHHHHHHHHcCCCchhhhh
Confidence 33221 122346788999998754 4578999999999999999999777654221 111111111110000
Q ss_pred ----cccccCccccCC-----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 ----AADVLDPTVLTA-----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ----~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
............ ........+.+++.+||++||++||+++|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 229 GVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred hcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000000000000 112234578899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=302.70 Aligned_cols=248 Identities=25% Similarity=0.374 Sum_probs=199.3
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
+|...++||+|++|.||+|... +++.+|+|++........+.+.+|+.+++.++|||++++++++..+++.++|+||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 3445678999999999999864 688999998865544455668899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+++|.+++... .+++..+..++.|++.|++||| +.|++||||+|+||+++.++.++++|||.+........
T Consensus 100 ~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~- 170 (285)
T cd06648 100 GGALTDIVTHT-----RMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP- 170 (285)
T ss_pred CCCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc-
Confidence 99999998762 3788899999999999999999 89999999999999999999999999998875543221
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccC
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (959)
......|++.|+|||...+..++.++||||+|+++|||++|+.||..... .... ........ +...
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-------~~~~-~~~~~~~~-----~~~~- 236 (285)
T cd06648 171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-------LQAM-KRIRDNLP-----PKLK- 236 (285)
T ss_pred ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-------HHHH-HHHHhcCC-----CCCc-
Confidence 22334688999999999888899999999999999999999999854211 1111 11221110 1110
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 919 ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
........+.+++.+||+.+|++||+++++++
T Consensus 237 -~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 237 -NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred -ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 11113356889999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=336.71 Aligned_cols=463 Identities=29% Similarity=0.311 Sum_probs=352.4
Q ss_pred hhhhhhcCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCc
Q 002155 21 LTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGN 100 (959)
Q Consensus 21 ~~~~~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 100 (959)
|.-+++.||..+..|..+..+.+|+.|+++.|-+. ..|.+..++++|++|.|.+|++. ..|.++..+++|+.||+|.|
T Consensus 47 L~~l~lsnn~~~~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N 124 (1081)
T KOG0618|consen 47 LKSLDLSNNQISSFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFN 124 (1081)
T ss_pred eEEeeccccccccCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchh
Confidence 67788889999999999999999999999999988 88899999999999999999998 88999999999999999999
Q ss_pred cccccCCcccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCcc
Q 002155 101 LLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180 (959)
Q Consensus 101 ~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~ 180 (959)
++. ..|..+..++.+..+..++|......+. ..++.+++..|.+.+.++..+..+.. .|+|++|.+. -..
T Consensus 125 ~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~----~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~d 194 (1081)
T KOG0618|consen 125 HFG-PIPLVIEVLTAEEELAASNNEKIQRLGQ----TSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLD 194 (1081)
T ss_pred ccC-CCchhHHhhhHHHHHhhhcchhhhhhcc----ccchhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhh
Confidence 998 5677888899999999999933323222 33788899999998888888777766 7999999887 335
Q ss_pred ccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCC
Q 002155 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQ 260 (959)
Q Consensus 181 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 260 (959)
+.++.+|+.|....|++... .-..++|+.|+.++|.++...+ .+. -.+|+++++++|+++++ |++++.+.+|+
T Consensus 195 ls~~~~l~~l~c~rn~ls~l----~~~g~~l~~L~a~~n~l~~~~~-~p~-p~nl~~~dis~n~l~~l-p~wi~~~~nle 267 (1081)
T KOG0618|consen 195 LSNLANLEVLHCERNQLSEL----EISGPSLTALYADHNPLTTLDV-HPV-PLNLQYLDISHNNLSNL-PEWIGACANLE 267 (1081)
T ss_pred hhhccchhhhhhhhcccceE----EecCcchheeeeccCcceeecc-ccc-cccceeeecchhhhhcc-hHHHHhcccce
Confidence 67888999999999998832 2234689999999999984332 222 25799999999999965 69999999999
Q ss_pred eeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCC
Q 002155 261 CLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRL 340 (959)
Q Consensus 261 ~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l 340 (959)
.|+..+|+|.. +| ..+..++.|+.+++.+|.+. .+|......+.|+.|+|..|+|...++..|.-+
T Consensus 268 ~l~~n~N~l~~-lp------------~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~ 333 (1081)
T KOG0618|consen 268 ALNANHNRLVA-LP------------LRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVL 333 (1081)
T ss_pred EecccchhHHh-hH------------HHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhh
Confidence 99999998851 11 12344566777777888877 667777778888888888888886555555555
Q ss_pred CC-CCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccc
Q 002155 341 TN-LTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLD 419 (959)
Q Consensus 341 ~~-L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 419 (959)
.. |..|+.+.|++.......=..++.|+.|++.+|.+++..-..+.++++|+.|+|++|++.......+.+++.|++|+
T Consensus 334 ~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~ 413 (1081)
T KOG0618|consen 334 NASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELN 413 (1081)
T ss_pred hHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHh
Confidence 44 77777888887743322223356788888888888777666777788888888888888765556677777888888
Q ss_pred cCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccc
Q 002155 420 LSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKF 499 (959)
Q Consensus 420 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 499 (959)
||+|+++ .+|..+.+++.|+.|...+|+|.. .| .+..+++|+.+|+|.|+|
T Consensus 414 LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~---------------------------fP-e~~~l~qL~~lDlS~N~L 464 (1081)
T KOG0618|consen 414 LSGNKLT-TLPDTVANLGRLHTLRAHSNQLLS---------------------------FP-ELAQLPQLKVLDLSCNNL 464 (1081)
T ss_pred cccchhh-hhhHHHHhhhhhHHHhhcCCceee---------------------------ch-hhhhcCcceEEecccchh
Confidence 8888887 677778888888888887777763 44 566788888888888888
Q ss_pred cccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccC
Q 002155 500 TGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAEN 545 (959)
Q Consensus 500 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 545 (959)
+...-+.-...++|++|||++|.=....-..|..+.++...++.-|
T Consensus 465 ~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 465 SEVTLPEALPSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred hhhhhhhhCCCcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 7533322233388999999999633344456666677776666666
|
|
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=304.52 Aligned_cols=245 Identities=25% Similarity=0.331 Sum_probs=199.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888999999999999999875 58999999986532 233456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++++|.+++.... .+++..+..++.|++.|++||| +.|++||||+|+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~~----~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 81 EYVPGGELFSHLRKSG----RFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 9999999999997653 5788999999999999999999 89999999999999999999999999999977543
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. .....+++.|+|||.+.+..++.++||||+|+++|+|++|..||..... .........+. +
T Consensus 154 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~------~ 215 (290)
T cd05580 154 R----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP--------IQIYEKILEGK------V 215 (290)
T ss_pred C----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHhcCC------c
Confidence 2 2334688999999998888889999999999999999999999864321 11112221111 0
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
.. +......+.+++.+||..||.+|+ +++|++++
T Consensus 216 ~~----~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 216 RF----PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred cC----CccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 11 111234677899999999999999 77777653
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=330.97 Aligned_cols=270 Identities=17% Similarity=0.219 Sum_probs=188.3
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcCC--CCEEEEEE--------------cc---ccchhhHHHHHHHHHHHhcCCCCce
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALPD--GKTVAVKK--------------LS---QAKTQGHREFTAEMETLGKVKHQNL 737 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~~--~~~vavK~--------------~~---~~~~~~~~~~~~e~~~l~~l~h~ni 737 (959)
..++|++.+.||+|+||+||+|.++. +..+++|. +. .........+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 34689999999999999999987532 22222221 11 0112234567899999999999999
Q ss_pred eccccceecCCceEEEEEeccCCCHHHHHhhhcCC-ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC
Q 002155 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGS-LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN 816 (959)
Q Consensus 738 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 816 (959)
+++++++...+..|+|+|++. +++.+++...... .......++..++.|++.||+||| +.|||||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEC
Confidence 999999999999999999985 4777776543211 112335667789999999999999 89999999999999999
Q ss_pred CCCcEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchH
Q 002155 817 EEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLV 896 (959)
Q Consensus 817 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~ 896 (959)
.++.+||+|||+++.+............||..|+|||++.+..++.++|||||||++|||++|..++...........+.
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~ 381 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL 381 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence 99999999999998765433333344679999999999999999999999999999999999886543221111101111
Q ss_pred HHH-----------------HHHhhcCccccccCccccCCC--CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 897 GWV-----------------FQKMKKGQAADVLDPTVLTAD--SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 897 ~~~-----------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..+ ...+....... .+...+.. .......+.+++.+|++.||.+|||+.|++++
T Consensus 382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDH--AGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHhcccChhhcCCcHHHHHHHhhhhhccc--CccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 100 00000000000 00000000 00112346678899999999999999999874
|
|
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=305.95 Aligned_cols=262 Identities=26% Similarity=0.338 Sum_probs=195.5
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+|+..+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999875 68899999886432 22235688899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+. ++|..++..... ..+++..+..++.|++.|++||| +.+++||||+|+||++++++.+|++|||.+.......
T Consensus 81 ~~-~~l~~~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 81 LH-QDLKKFMDASPL--SGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred cc-cCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 96 589888876432 35788999999999999999999 8899999999999999999999999999987654321
Q ss_pred ccccccccccccccCCCcCCCCC-CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc------
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGR-STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA------ 909 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 909 (959)
. ......++..|+|||...+.. ++.++||||||+++|||+||+.||....... .... ..+........
T Consensus 155 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~ 229 (284)
T cd07860 155 R-TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID---QLFR-IFRTLGTPDEVVWPGVT 229 (284)
T ss_pred c-ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH---HHHH-HHHHhCCCChhhhhhhh
Confidence 1 122234678999999876544 5889999999999999999999986432110 0000 00000000000
Q ss_pred -----cccCccccCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 910 -----DVLDPTVLTA----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 910 -----~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
....+..... ........+.+++.+||+.||++||++++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 230 SLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0000000000 011223457789999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=298.71 Aligned_cols=248 Identities=27% Similarity=0.359 Sum_probs=201.1
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
+|++.+.||+|+||.||+|++. +++.||+|.+.... ....+.+.+|++++++++||||+++++++..+...++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4778899999999999999976 58999999987533 2345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++... ..+++..+..++.|+++|+.||| +.+++|+||+|+||++++++.++|+|||.+......
T Consensus 81 ~~~~~~L~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 81 LLLGGDLRYHLSQK----VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred CCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 99999999999765 25788999999999999999999 889999999999999999999999999998765432
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
. ......++..|+|||...+..++.++|+||+|+++|++++|..||...... ...++...... ....
T Consensus 154 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~~---~~~~--- 220 (258)
T cd05578 154 T--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT-----IRDQIRAKQET---ADVL--- 220 (258)
T ss_pred c--cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc-----HHHHHHHHhcc---cccc---
Confidence 2 223346788999999998888999999999999999999999998654221 12222222211 0011
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCH--HHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTM--LHVLK 951 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~--~ell~ 951 (959)
.+......+.+++.+||+.||.+||++ +|+++
T Consensus 221 ----~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 221 ----YPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred ----CcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 111233678889999999999999999 66653
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=305.91 Aligned_cols=265 Identities=25% Similarity=0.280 Sum_probs=195.1
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++++|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++.++|+||+++++++..++..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4578999999999999999999865 68899999986433 222345678999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+. +++.+++.... ..+.+..+..++.|++.||+||| +.|++||||||+||+++.++.++|+|||+++....
T Consensus 83 e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 83 EYMH-TDLAQYMIQHP---GGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred eccc-CCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 9996 67777765433 24677888899999999999999 88999999999999999999999999999875432
Q ss_pred ccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh---------
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK--------- 904 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--------- 904 (959)
... ......+++.|+|||.+.+. .++.++||||+|+++|||++|..||....... +....+.....
T Consensus 156 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 231 (291)
T cd07870 156 PSQ-TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF---EQLEKIWTVLGVPTEDTWPG 231 (291)
T ss_pred CCC-CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH---HHHHHHHHHcCCCChhhhhh
Confidence 211 12234578899999987654 57889999999999999999999986432210 00000000000
Q ss_pred --c-CccccccCccccCC------CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 905 --K-GQAADVLDPTVLTA------DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 905 --~-~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ........+..... ........+.+++.+|++.||++|||+.|++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 232 VSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0 00000000000000 001123467789999999999999999998753
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-34 Score=279.43 Aligned_cols=254 Identities=21% Similarity=0.258 Sum_probs=202.9
Q ss_pred HhcCCCCC-CeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceec----CCc
Q 002155 677 ATNNFCKT-NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSF----DEE 749 (959)
Q Consensus 677 ~~~~f~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~----~~~ 749 (959)
.+++|.+. ++||-|-.|.|-.+..+ +|+++|+|++... ...++|++.--.. .|||||.++++|.. ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 46677775 58999999999998765 7899999998643 2345677665544 69999999998843 345
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---CCcEEEccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE---EFEAKVADF 826 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Df 826 (959)
..+|||.++||.|...+++++. ..+.+.++..|++||+.|+.||| +.+|.|||+||+|+|... +..+||+||
T Consensus 134 LLiVmE~meGGeLfsriq~~g~--~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGD--QAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eEeeeecccchHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEeccc
Confidence 6789999999999999988763 46899999999999999999999 899999999999999964 457999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
|+|+.... .......+.|+.|.|||++...+|+..+|+||+||++|-|++|.+||..... ..+..-++..++.+
T Consensus 209 GFAK~t~~--~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg----~aispgMk~rI~~g 282 (400)
T KOG0604|consen 209 GFAKETQE--PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG----LAISPGMKRRIRTG 282 (400)
T ss_pred ccccccCC--CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC----ccCChhHHhHhhcc
Confidence 99986542 2333445789999999999999999999999999999999999999976422 33333345555554
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.... ..+++........++|+.++..+|.+|.|+++++.+
T Consensus 283 qy~F------P~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 283 QYEF------PEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred CccC------CChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 3221 223455666777889999999999999999998764
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-33 Score=294.08 Aligned_cols=250 Identities=31% Similarity=0.462 Sum_probs=204.3
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
+|+..+.||+|++|.||+|... +++.+|+|++..........+.+|++.++.++||+++++++++..+...++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4777899999999999999976 688999999976655556778899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+++|.+++.... ..+++..+..++.|++.|++||| ..|++||||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 153 (253)
T cd05122 81 GGSLKDLLKSTN---QTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA- 153 (253)
T ss_pred CCcHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence 999999987753 35899999999999999999999 89999999999999999999999999999977654322
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccC
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (959)
.....++..|+|||...+..++.++||||+|+++|+|++|+.||..... ......... ...... .
T Consensus 154 -~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~-~~~~~~-----~- 218 (253)
T cd05122 154 -RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP-------MKALFKIAT-NGPPGL-----R- 218 (253)
T ss_pred -ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch-------HHHHHHHHh-cCCCCc-----C-
Confidence 2345678899999999888899999999999999999999999864311 111111111 111110 0
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 919 ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........+.+++.+||+.||++|||+.|++++
T Consensus 219 -~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 219 -NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred -cccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111124568889999999999999999999864
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=298.93 Aligned_cols=250 Identities=23% Similarity=0.356 Sum_probs=204.0
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+|++.++||+|+||.||+|+.. +++.+|+|++.... ......+.+|++++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4778899999999999999765 68899999986532 33445677899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|.+++.........+++..++.++.|++.|++||| +.|++||||+|+||++++++.+|++|||.+......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999999999775444456889999999999999999999 899999999999999999999999999999776533
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
......+++.|+|||...+..++.++|+||+|+++||+++|+.||..... . ...........
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-------~-~~~~~~~~~~~-------- 218 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM-------Q-DLRYKVQRGKY-------- 218 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------H-HHHHHHhcCCC--------
Confidence 22234578899999999888899999999999999999999999854311 1 11111211111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+.........+.+++.+|+..+|++||++.+++++
T Consensus 219 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 219 -PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred -CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11122445668899999999999999999999864
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=304.75 Aligned_cols=246 Identities=32% Similarity=0.443 Sum_probs=195.1
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
+.|...+.||+|+||.||+|+.. +++.||+|++.... .....++.+|+++++.++|||++++++++..++..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45778899999999999999875 68899999886432 233456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||++ |++.+++.... ..+++..+..++.|++.|+.||| +.+++||||+|+||++++++.++|+|||++.....
T Consensus 95 e~~~-g~l~~~~~~~~---~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 95 EYCL-GSASDILEVHK---KPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HhhC-CCHHHHHHHcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 9997 57777765433 25789999999999999999999 88999999999999999999999999999875432
Q ss_pred ccccccccccccccccCCCcCC---CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQ---SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
. ....+++.|+|||++. ...++.++||||||+++|||++|..||..... ...... .....
T Consensus 168 ~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~-------~~~~~~-~~~~~---- 230 (307)
T cd06607 168 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------MSALYH-IAQND---- 230 (307)
T ss_pred C-----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH-------HHHHHH-HhcCC----
Confidence 1 2346788999999864 45688999999999999999999999854211 111111 11110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+.. ....+...+.+++.+||..||++||++.+++++
T Consensus 231 -~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 231 -SPTL---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred -CCCC---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0111 122345578899999999999999999999875
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=302.68 Aligned_cols=253 Identities=26% Similarity=0.395 Sum_probs=204.4
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++.|+..+.||+|+||.||+|.++ +++.||+|++..... ..+.+.+|++.++.++|+|++++++++..+...++|||
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4567888889999999999999976 688999999875544 45678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++.... ..+++..++.++.|++.|++||| +.|++|+|++|+||+++.++.++|+|||.+......
T Consensus 96 ~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 169 (286)
T cd06614 96 YMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE 169 (286)
T ss_pred ccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence 999999999998754 35889999999999999999999 899999999999999999999999999998765432
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
.. ......++..|+|||.+.+..++.++||||||+++|+|++|..||...... ........ .....
T Consensus 170 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~-------~~~~~~~~-~~~~~----- 235 (286)
T cd06614 170 KS-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL-------RALFLITT-KGIPP----- 235 (286)
T ss_pred hh-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHh-cCCCC-----
Confidence 21 122335778999999998888999999999999999999999998542111 11111111 10000
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. .....+...+.+++.+||+.+|.+||++.+++++
T Consensus 236 ~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 236 L--KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred C--cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 0 0112234568899999999999999999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=309.57 Aligned_cols=269 Identities=23% Similarity=0.286 Sum_probs=196.8
Q ss_pred CCCCCCeeccCCCeEEEEEEcC---CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecC--CceE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP---DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD--EEKL 751 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~ 751 (959)
+|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++... ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778889999999999999975 47899999987632 33345677899999999999999999999887 7899
Q ss_pred EEEEeccCCCHHHHHhhhcCCc-cccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC----CCcEEEccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSL-EVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE----EFEAKVADF 826 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~----~~~~kl~Df 826 (959)
+||||+++ ++.+++....... ..+++..++.++.|++.|++||| +.+++||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 6777765443222 36788999999999999999999 899999999999999999 899999999
Q ss_pred ccccccccccc--cccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCc-----hHHH
Q 002155 827 GLARLISACET--HVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGN-----LVGW 898 (959)
Q Consensus 827 g~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~-----~~~~ 898 (959)
|++........ .......++..|+|||++.+ ..++.++|||||||++|||++|.+||.....+..... ....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99976543221 11223467889999997765 4578999999999999999999999975433221000 0000
Q ss_pred HHHHhhcCc-----------c-cc---ccCccccC-CCCH-------HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 899 VFQKMKKGQ-----------A-AD---VLDPTVLT-ADSK-------PMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 899 ~~~~~~~~~-----------~-~~---~~~~~~~~-~~~~-------~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+...+.... . .. .......+ .... .....+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 101100000 0 00 00000000 0000 233468899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=303.46 Aligned_cols=256 Identities=26% Similarity=0.375 Sum_probs=194.3
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCC-CCceeccccceecCCceEEEEEe
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+|+..+.||+|+||.||++... +++.||+|.+.... ......+.+|+.++.++. ||||+++++++..++..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4555678999999999999865 58999999986533 334556888999999996 99999999999988999999999
Q ss_pred ccCCCHHHHHhhhc-CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 757 MVNGSLDLWLRNRT-GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 757 ~~~g~L~~~l~~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
++. ++.++..... .....+++..+..++.|++.|++|||+ ..+++||||||+||+++.++.++|+|||+++.....
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 864 6655433211 112458889999999999999999994 359999999999999999999999999999765422
Q ss_pred cccccccccccccccCCCcCCCC---CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSG---RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
. ......|+..|+|||.+.+. .++.++||||+||++|||++|+.||.... .....+.+... ..
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~~-~~----- 227 (288)
T cd06616 162 I--AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN------SVFDQLTQVVK-GD----- 227 (288)
T ss_pred C--ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc------hHHHHHhhhcC-CC-----
Confidence 1 11233578899999988766 68999999999999999999999986421 11111111111 10
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+.............+.+++.+||+.||++||++.+++++
T Consensus 228 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 228 PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111112223355678899999999999999999999875
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=305.52 Aligned_cols=265 Identities=24% Similarity=0.268 Sum_probs=195.1
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--hhHHHHHHHHHHHhcCC-CCceeccccceecCCc-----
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--QGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEE----- 749 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~----- 749 (959)
++|+..+.||+|+||.||+|.+. +++.||+|++..... .....+.+|+.+++.++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999875 689999998764322 23356788999999995 6999999999876665
Q ss_pred eEEEEEeccCCCHHHHHhhhcCC-ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-CCcEEEcccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGS-LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE-EFEAKVADFG 827 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg 827 (959)
.|+||||+++ ++.+++...... ...+++..++.++.||+.||+||| +.|++||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999986 898888764322 346799999999999999999999 899999999999999998 8899999999
Q ss_pred cccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 828 LARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
.+........ ......+++.|+|||.+.+ ..++.++||||+|+++|||++|..||....... ....+.......
T Consensus 157 ~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~----~~~~~~~~~~~~ 231 (295)
T cd07837 157 LGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ----QLLHIFKLLGTP 231 (295)
T ss_pred cceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH----HHHHHHHHhCCC
Confidence 9876532211 1122356789999997754 457899999999999999999999986432110 000001110000
Q ss_pred ccccc--------------cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 QAADV--------------LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 ~~~~~--------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..... ..+.............+.+++.+||+.||.+||++.|++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 232 TEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred ChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000 00000000112244567899999999999999999999864
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=303.28 Aligned_cols=261 Identities=25% Similarity=0.304 Sum_probs=195.4
Q ss_pred CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
|++.+.||+|++|.||+|.+. +|..||+|++.... ......+.+|+++++.++|||++++++++..++..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567889999999999999865 68999999886443 222356788999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
+ ++|.+++..... ..+++..+..++.|+++||+||| +.+++||||+|+||+++.++.++|+|||.+........
T Consensus 81 ~-~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 81 D-LDLKKYMDSSPL--TGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred C-cCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 5 689999876442 35789999999999999999999 88999999999999999999999999999976532211
Q ss_pred cccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc---------
Q 002155 838 HVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ--------- 907 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------- 907 (959)
......++..|+|||++.+. .++.++||||+|+++|||++|++||........ ....+ +......
T Consensus 155 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~ 229 (283)
T cd07835 155 -TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ---LFRIF-RTLGTPDEDVWPGVTS 229 (283)
T ss_pred -ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHH-HHhCCCChHHhhhhhh
Confidence 11223468899999987654 568899999999999999999999864321100 00000 0000000
Q ss_pred ---ccc---ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 ---AAD---VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ---~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... .................+.+++.+||+.||++||+++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 230 LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred chhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000 000000001112233567899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=304.94 Aligned_cols=262 Identities=26% Similarity=0.276 Sum_probs=196.1
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--hhHHHHHHHHHHHhcCCCCceeccccceecC--CceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--QGHREFTAEMETLGKVKHQNLVPLLGYCSFD--EEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv 753 (959)
++|++.+.||+|+||.||+|.++ +++.+|+|.++.... .....+.+|+.++++++||||+++++++..+ ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 56888999999999999999976 588999999864332 2233567899999999999999999998777 889999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++ +|.+++.... ..+++.++..++.|++.||+||| +.|++||||||+||+++.++.++|+|||.+....
T Consensus 85 ~e~~~~-~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 85 MEYVEH-DLKSLMETMK---QPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred ehhcCc-CHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 999975 9999887644 25889999999999999999999 8899999999999999999999999999998664
Q ss_pred cccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh--------
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK-------- 904 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-------- 904 (959)
.... ......+++.|+|||.+.+. .++.++|+||+|+++|||++|.+||....... ....+.....
T Consensus 158 ~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~----~~~~~~~~~~~~~~~~~~ 232 (293)
T cd07843 158 SPLK-PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID----QLNKIFKLLGTPTEKIWP 232 (293)
T ss_pred CCcc-ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHhCCCchHHHH
Confidence 3221 11233568899999987654 46899999999999999999999986432110 0000000000
Q ss_pred ---cCcc---c---cccCccccCCCCHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 905 ---KGQA---A---DVLDPTVLTADSKP-MMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 905 ---~~~~---~---~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.... . .............. ....+.+++.+||+.||++|||+.|++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 233 GFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred HhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0000 0 00000000001111 34567889999999999999999999864
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-33 Score=300.70 Aligned_cols=258 Identities=23% Similarity=0.252 Sum_probs=192.8
Q ss_pred CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCC-CCceeccccceecC--CceEEEEE
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVK-HQNLVPLLGYCSFD--EEKLLVYE 755 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~--~~~~lv~e 755 (959)
|++.+.||+|+||.||+|+.. +++.||+|+++... ........+|+..++++. |||++++++++.++ +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567889999999999999865 68899999987542 222233457888888885 99999999999877 88999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|++ +++.+++.... ..+++.+++.++.|++.||+||| +.|++||||+|+||+++. +.+||+|||.+......
T Consensus 81 ~~~-~~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 81 LMD-MNLYELIKGRK---RPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred cCC-ccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 997 58888876543 35789999999999999999999 889999999999999999 99999999999765432
Q ss_pred cccccccccccccccCCCcCC-CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHH-----------Hh
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQ-SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ-----------KM 903 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-----------~~ 903 (959)
.. .....++..|+|||... +..++.++||||+||++|||++|..||...... +...+... ..
T Consensus 153 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07831 153 PP--YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL----DQIAKIHDVLGTPDAEVLKKF 226 (282)
T ss_pred CC--cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH----HHHHHHHHHcCCCCHHHHHhh
Confidence 21 12345788999999754 455788999999999999999999998653211 11111111 11
Q ss_pred hcCccccccCccccC----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 904 KKGQAADVLDPTVLT----ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..........+.... .........+.+++.+||+++|++||++++++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 227 RKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 111111111111100 0112345678999999999999999999999864
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=309.77 Aligned_cols=269 Identities=26% Similarity=0.344 Sum_probs=200.5
Q ss_pred CCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCC------ceE
Q 002155 680 NFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE------EKL 751 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~ 751 (959)
.|...+.||+|+||.||+|+. .+|+.||||.++... ....+...+|++++++++|||||+++++-.+.. ...
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 345567899999999999995 479999999997643 334566779999999999999999998765433 458
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC--CCC--cEEEcccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN--EEF--EAKVADFG 827 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~--~~kl~Dfg 827 (959)
+|||||.+|+|...+++..+. .-+++.+.+.++.+++.|+.||| +.|||||||||.||++- .+| -.||+|||
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~-~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENA-YGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred EEEeecCCCcHHHHhcCcccc-cCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 999999999999999876543 45899999999999999999999 89999999999999983 334 47999999
Q ss_pred cccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 828 LARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
.|+.... .......+||..|.+||+... +.|+..+|.|||||++||+.||..||.+....-...+++ |........
T Consensus 170 ~Arel~d--~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~-~~~~tkkp~ 246 (732)
T KOG4250|consen 170 AARELDD--NSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIM-WHIITKKPS 246 (732)
T ss_pred ccccCCC--CCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhh-hhhhccCCC
Confidence 9998764 335667899999999999884 889999999999999999999999997754432222221 211111110
Q ss_pred ccc------------cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCC--CHHHHHHHHHh
Q 002155 907 QAA------------DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP--TMLHVLKFLKE 955 (959)
Q Consensus 907 ~~~------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp--s~~ell~~L~~ 955 (959)
... ....-+............+-+.+..++..+|++|- .+.+.-+.+.+
T Consensus 247 ~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~d 309 (732)
T KOG4250|consen 247 GVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDD 309 (732)
T ss_pred ceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHH
Confidence 000 00000011122344555666777778888999988 55544444443
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=297.08 Aligned_cols=252 Identities=26% Similarity=0.425 Sum_probs=204.9
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+|++.+.||+|+||.||+|.+. +++.||+|++..... .....+.+|+++++.++|||++++++.+..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778899999999999999975 588999999875432 4556788999999999999999999999988999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|.++++........+++.++..++.+++.|++||| +.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 9999999999876433456899999999999999999999 8899999999999999999999999999997764432
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......+++.|+|||...+..++.++||||+|+++|+|++|..||.... ..... ........ +..
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-------~~~~~-~~~~~~~~-----~~~ 223 (258)
T cd08215 158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-------LLELA-LKILKGQY-----PPI 223 (258)
T ss_pred -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-------HHHHH-HHHhcCCC-----CCC
Confidence 22233468889999999888889999999999999999999999985421 11111 11111111 111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+......+.+++.+||..+|++||++.+++++
T Consensus 224 ----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 224 ----PSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred ----CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11234567889999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=295.71 Aligned_cols=250 Identities=26% Similarity=0.406 Sum_probs=200.0
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+|+..+.||+|+||.||+|..+ +|..||+|.+.... ....+.+.+|+++++.++|+|++++++++..+...++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999876 58899999986532 23345678999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC-cEEEcccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF-EAKVADFGLARLISAC 835 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~~~~ 835 (959)
+++++|.+++..... ..+++..+..++.|++.|++||| +.+++|+|+||+||++++++ .++++|||.+......
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 81 CDGGDLMKRINRQRG--VLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred CCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 999999999976432 34789999999999999999999 88999999999999999886 4699999999766432
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
.. ......|++.|+|||+..+..++.++||||+|+++||+++|..||.... ...++....... .. .
T Consensus 156 ~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~~-----~~-~ 221 (257)
T cd08225 156 ME-LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-------LHQLVLKICQGY-----FA-P 221 (257)
T ss_pred cc-cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-------HHHHHHHHhccc-----CC-C
Confidence 21 2223457889999999888889999999999999999999999985421 122222222111 11 1
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. .......+.+++.+||..+|++||++.|++++
T Consensus 222 ~----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 222 I----SPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred C----CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1 11223468889999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=294.02 Aligned_cols=251 Identities=22% Similarity=0.260 Sum_probs=192.8
Q ss_pred HHHHHHHhcCCCCCCee--ccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceec
Q 002155 671 LVHILEATNNFCKTNII--GDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSF 746 (959)
Q Consensus 671 ~~~~~~~~~~f~~~~~l--g~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 746 (959)
..+.....++|++.+.+ |+|+||.||+++.+ +++.+|+|.+........ |+.....+ +|||++++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEec
Confidence 34445556777777776 99999999999864 688899998864322111 22222212 79999999999999
Q ss_pred CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC-cEEEcc
Q 002155 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF-EAKVAD 825 (959)
Q Consensus 747 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~D 825 (959)
++..++||||+++++|.+++.... .+++.++..++.|+++|++||| +.|++||||||+||+++.++ .++++|
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~d 153 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKEG----KLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCD 153 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEec
Confidence 999999999999999999997653 5899999999999999999999 88999999999999999998 999999
Q ss_pred cccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhc
Q 002155 826 FGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK 905 (959)
Q Consensus 826 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (959)
||.+...... ....++..|+|||++.+..++.++||||+|+++|||++|+.||...... ......+.... .
T Consensus 154 fg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~--~ 224 (267)
T PHA03390 154 YGLCKIIGTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE--ELDLESLLKRQ--Q 224 (267)
T ss_pred CccceecCCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc--hhhHHHHHHhh--c
Confidence 9998765321 2235788999999999889999999999999999999999999743221 11111111111 0
Q ss_pred CccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHH
Q 002155 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT-MLHVLKF 952 (959)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~ell~~ 952 (959)
... .........+.+++.+||+.||.+||+ ++|++++
T Consensus 225 ---~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 225 ---KKL-------PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred ---ccC-------CcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 000 111234456888999999999999996 6998753
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=334.48 Aligned_cols=252 Identities=29% Similarity=0.385 Sum_probs=199.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
+-++..+.+||.|.||.||.|.. .+|...|||.+... .....+...+|+.++..++|||+|++||+-.+.+..++.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 45677889999999999999985 46899999987533 2334456778999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
|||++|+|.+.++... -.++.....+..|++.|++||| +.|||||||||.||+++.+|.+|++|||.|..+..
T Consensus 1314 EyC~~GsLa~ll~~gr----i~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGR----IEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HHhccCcHHHHHHhcc----hhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecC
Confidence 9999999999998754 3455666778899999999999 89999999999999999999999999999987754
Q ss_pred ccccc---cccccccccccCCCcCCCCC---CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 835 CETHV---STDIAGTFGYIPPEYGQSGR---STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 835 ~~~~~---~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
..... -....||+.|||||++.+.. -..++||||+||++.||+||+.||..-.. .+.++. ++..+.
T Consensus 1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn---e~aIMy----~V~~gh- 1458 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN---EWAIMY----HVAAGH- 1458 (1509)
T ss_pred chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc---hhHHHh----HHhccC-
Confidence 32111 12457999999999987654 46789999999999999999999854211 122221 111111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+..+......=.+++.+|+..||++|.++.|++++
T Consensus 1459 --------~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1459 --------KPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred --------CCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 112222355556788889999999999999988764
|
|
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-33 Score=300.18 Aligned_cols=245 Identities=25% Similarity=0.365 Sum_probs=195.8
Q ss_pred CCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCH
Q 002155 684 TNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
..+||+|+||.||+|... +++.||+|++..........+.+|+.+++.++|||++++++++..++..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 356999999999999874 6899999998655555566788999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccccc
Q 002155 763 DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD 842 (959)
Q Consensus 763 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 842 (959)
.+++... .+++..+..++.|++.|++||| +.|++||||+|+||+++.++.++|+|||.+....... .....
T Consensus 105 ~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~ 175 (292)
T cd06657 105 TDIVTHT-----RMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKS 175 (292)
T ss_pred HHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceeccccc-ccccc
Confidence 9987543 3788899999999999999999 8899999999999999999999999999987654322 12233
Q ss_pred ccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCH
Q 002155 843 IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSK 922 (959)
Q Consensus 843 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (959)
..+++.|+|||...+..++.++|+||+|+++|||++|..||...... . .......... +... ...
T Consensus 176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~-------~-~~~~~~~~~~-----~~~~--~~~ 240 (292)
T cd06657 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-------K-AMKMIRDNLP-----PKLK--NLH 240 (292)
T ss_pred cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------H-HHHHHHhhCC-----cccC--Ccc
Confidence 46789999999988888999999999999999999999998642111 1 1111111100 0000 011
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 923 PMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 923 ~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.....+.+++.+||+.||.+||++.+++++
T Consensus 241 ~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 241 KVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred cCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 123457788999999999999999999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-33 Score=304.30 Aligned_cols=263 Identities=28% Similarity=0.304 Sum_probs=195.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--hhHHHHHHHHHHHhcCCCCceeccccceecC--CceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--QGHREFTAEMETLGKVKHQNLVPLLGYCSFD--EEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 752 (959)
.++|++.+.||+|+||.||+|.++ +|+.||+|+++.... .....+.+|+.++++++|+|++++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467899999999999999999875 589999999864322 1223456799999999999999999998654 46799
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++ +|.+++.... ..+++.++..++.|++.|++||| +.|++||||||+||++++++.+||+|||.+...
T Consensus 86 v~e~~~~-~l~~~l~~~~---~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMP---TPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEecCCC-CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 9999975 8888887643 35889999999999999999999 899999999999999999999999999999876
Q ss_pred ccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC-----
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG----- 906 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----- 906 (959)
.... .......++..|+|||.+.+ ..++.++||||+||++|||++|++||...... .....+.......
T Consensus 159 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~----~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07845 159 GLPA-KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI----EQLDLIIQLLGTPNESIW 233 (309)
T ss_pred CCcc-CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHhcCCCChhhc
Confidence 4322 11222345788999998765 45789999999999999999999998643211 1111111111000
Q ss_pred ------ccccccC-ccccCCC----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 ------QAADVLD-PTVLTAD----SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 ------~~~~~~~-~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
....... +...... .......+.+++.+|++.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 234 PGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred hhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000000 0000000 01124567789999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=302.97 Aligned_cols=247 Identities=32% Similarity=0.431 Sum_probs=194.6
Q ss_pred CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
|+..+.||+|+||.||+|++. ++..||+|++.... ......+.+|++++++++|||++++++++..++..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 666788999999999999865 68899999886432 22345688899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+.+ ++.+++.... .++++.++..++.|++.|+.||| +.|++||||+|+||+++.++.++|+|||++.....
T Consensus 107 ~~g-~l~~~~~~~~---~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-- 177 (317)
T cd06635 107 CLG-SASDLLEVHK---KPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP-- 177 (317)
T ss_pred CCC-CHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCC--
Confidence 975 7877775443 35889999999999999999999 89999999999999999999999999999865432
Q ss_pred ccccccccccccccCCCcCC---CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 837 THVSTDIAGTFGYIPPEYGQ---SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.....++..|+|||.+. .+.++.++|||||||++|||++|+.||..... ............
T Consensus 178 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-------~~~~~~~~~~~~------ 241 (317)
T cd06635 178 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------MSALYHIAQNES------ 241 (317)
T ss_pred ---cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH-------HHHHHHHHhccC------
Confidence 12346788999999863 45688999999999999999999999854211 111111111110
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
+. .........+.+++.+||+.+|.+||++.+++++...
T Consensus 242 ~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 280 (317)
T cd06635 242 PT---LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280 (317)
T ss_pred CC---CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence 11 1112234467889999999999999999999987543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=275.75 Aligned_cols=263 Identities=24% Similarity=0.374 Sum_probs=204.2
Q ss_pred HHHHHHHhcCCCCCCeeccCCCeEEEEEE-cCCCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CCceeccccceecCC
Q 002155 671 LVHILEATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDE 748 (959)
Q Consensus 671 ~~~~~~~~~~f~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~ 748 (959)
+.++...+ .+.||+|+|+.|..+. ..+|..||||++.+..........+|++++.+.+ |+||++++++|.+++
T Consensus 75 F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~ 149 (463)
T KOG0607|consen 75 FEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT 149 (463)
T ss_pred HHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence 45555554 4679999999999986 5689999999998876666778889999999995 999999999999999
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC---cEEEcc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF---EAKVAD 825 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~D 825 (959)
.+|+|||.|.||.|...++.+. .+++.++.++.++|+.||.||| .+||.|||+||+|||-.... -|||||
T Consensus 150 ~FYLVfEKm~GGplLshI~~~~----~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCD 222 (463)
T KOG0607|consen 150 RFYLVFEKMRGGPLLSHIQKRK----HFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICD 222 (463)
T ss_pred eEEEEEecccCchHHHHHHHhh----hccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeec
Confidence 9999999999999999998876 5889999999999999999999 99999999999999997654 489999
Q ss_pred cccccccc--c----ccccccccccccccccCCCcC-----CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCc---ccc
Q 002155 826 FGLARLIS--A----CETHVSTDIAGTFGYIPPEYG-----QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFK---DIE 891 (959)
Q Consensus 826 fg~~~~~~--~----~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwslG~il~elltg~~p~~~~~~---~~~ 891 (959)
|.+..-.. . .....-...+|+..|||||+. ....|+.++|.||+|||+|-|++|.+||.+... ++.
T Consensus 223 fDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWd 302 (463)
T KOG0607|consen 223 FDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWD 302 (463)
T ss_pred cccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCcc
Confidence 98874321 1 111111234688899999963 234689999999999999999999999965432 233
Q ss_pred CCchHHHH----HHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 892 GGNLVGWV----FQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 892 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
.++..... .+.+.++... . ....+......-.+++...+..||.+|.++.+++.
T Consensus 303 rGe~Cr~CQ~~LFesIQEGkYe-F-----PdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 303 RGEVCRVCQNKLFESIQEGKYE-F-----PDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CCCccHHHHHHHHHHHhccCCc-C-----ChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 33333333 3333333211 1 11223445556677888889999999999998875
|
|
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-33 Score=298.25 Aligned_cols=244 Identities=25% Similarity=0.332 Sum_probs=192.2
Q ss_pred eccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCH
Q 002155 687 IGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 687 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
||+|+||+||+|... +|+.||+|.+.... ......+..|+++++.++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999865 68899999886432 22234567899999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccccc
Q 002155 763 DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD 842 (959)
Q Consensus 763 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 842 (959)
.+++..... ..+++.++..++.|++.|+.||| +.|++||||+|+||++++++.++|+|||.+..... ......
T Consensus 81 ~~~l~~~~~--~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~--~~~~~~ 153 (277)
T cd05577 81 KYHIYNVGE--PGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG--GKKIKG 153 (277)
T ss_pred HHHHHHcCc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc--CCcccc
Confidence 999976542 35789999999999999999999 89999999999999999999999999999876542 122223
Q ss_pred ccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCH
Q 002155 843 IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSK 922 (959)
Q Consensus 843 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (959)
..++..|+|||+..+..++.++||||+|+++|+|++|+.||........ ...+...... . +. ....
T Consensus 154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~----~---~~---~~~~ 219 (277)
T cd05577 154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE----KEELKRRTLE----M---AV---EYPD 219 (277)
T ss_pred ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc----HHHHHhcccc----c---cc---cCCc
Confidence 4578899999998888899999999999999999999999865332111 1111111110 0 00 1112
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 002155 923 PMMLKMLRIAGDCLSDNPAMRP-----TMLHVLK 951 (959)
Q Consensus 923 ~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~ 951 (959)
.....+.+++.+||+.||++|| ++.+++.
T Consensus 220 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 220 KFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred cCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 2344678899999999999999 7777765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=278.01 Aligned_cols=271 Identities=25% Similarity=0.298 Sum_probs=201.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC---C--CCEEEEEEccccch--hhHHHHHHHHHHHhcCCCCceeccccceec-CCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP---D--GKTVAVKKLSQAKT--QGHREFTAEMETLGKVKHQNLVPLLGYCSF-DEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~---~--~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~ 749 (959)
...|+....||+|.||.||+|.-+ + .+.+|+|+++..+. .......+|+..++.++|||++.+..++.. +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 456888999999999999999643 2 33799999976532 223456789999999999999999998866 788
Q ss_pred eEEEEEeccCCCHHHHHhhhc-CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC----CcEEEc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRT-GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE----FEAKVA 824 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl~ 824 (959)
.++++||.+. +|...++-.. .....++...+..|+.||+.|+.||| +.=|+|||+||.|||+..+ |+|||+
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEee
Confidence 9999999988 8888775433 22356888999999999999999999 6779999999999999877 899999
Q ss_pred cccccccccccccc--ccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCc-----hH
Q 002155 825 DFGLARLISACETH--VSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGN-----LV 896 (959)
Q Consensus 825 Dfg~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~-----~~ 896 (959)
|||+++.+...-.. .....+-|.+|+|||.+.+. .|+.+.||||+|||+.||+|-.+-|.....+.+... ..
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl 258 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL 258 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence 99999988643222 22345679999999987765 589999999999999999999988876544443331 11
Q ss_pred HHHHHHhhcCccccccCccccCCCC----------------HH-------HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 897 GWVFQKMKKGQAADVLDPTVLTADS----------------KP-------MMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~-------~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..+.+.+......++.+-.-.+... .. -...-++++.+++..||-+|.|+++.+++
T Consensus 259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 2222222222222222211111110 00 01125678899999999999999998864
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=283.06 Aligned_cols=269 Identities=24% Similarity=0.336 Sum_probs=212.0
Q ss_pred CHHHHHHHhcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceecccc
Q 002155 670 TLVHILEATNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLG 742 (959)
Q Consensus 670 ~~~~~~~~~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~ 742 (959)
...++.-...+++...++-+|.||.||.|.|. +.+.|-||.++.. ++-....+..|.-.+..+.|||+..+.+
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 34445555677888889999999999999764 3456777877643 3444566888999999999999999999
Q ss_pred ceecC-CceEEEEEeccCCCHHHHHhhhcC----CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC
Q 002155 743 YCSFD-EEKLLVYEYMVNGSLDLWLRNRTG----SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE 817 (959)
Q Consensus 743 ~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 817 (959)
++.++ +..+++|.++.-|+|..|++...+ ..+.+...+...++.|++.|++||| +.|+||.||.++|+++|+
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDD 431 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehh
Confidence 98665 456889999999999999984332 2445677788999999999999999 899999999999999999
Q ss_pred CCcEEEcccccccccccccccccccc-cccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCch
Q 002155 818 EFEAKVADFGLARLISACETHVSTDI-AGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNL 895 (959)
Q Consensus 818 ~~~~kl~Dfg~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~ 895 (959)
..+|||+|=.+++...+.+.+.-.+. ..+..||+||.+....|+.++||||||+++|||+| |+.|+.. ++..++
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pyae----IDPfEm 507 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAE----IDPFEM 507 (563)
T ss_pred heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccc----cCHHHH
Confidence 99999999999998776555443322 34569999999999999999999999999999999 8888743 222222
Q ss_pred HHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 896 VGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
..+ ++.+.. -..+.+++.+++.++.-||..+|++||+++|++..|.++..
T Consensus 508 ~~y----lkdGyR---------laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 508 EHY----LKDGYR---------LAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHT 557 (563)
T ss_pred HHH----Hhccce---------ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 222 222211 11233455678889999999999999999999999998864
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-33 Score=299.43 Aligned_cols=263 Identities=24% Similarity=0.336 Sum_probs=197.5
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch-hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
+|++.+.||+|++|.||+|+.. +|+.||+|++..... .....+.+|++++++++|||++++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4788899999999999999975 688999999875432 23456778999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++ ++.+++..... ...+++..+..++.|+++|++||| +.|++||||||+||++++++.++++|||.+........
T Consensus 81 ~~-~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~ 155 (284)
T cd07836 81 DK-DLKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN 155 (284)
T ss_pred Cc-cHHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence 85 89888876432 235899999999999999999999 88999999999999999999999999999976543211
Q ss_pred cccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc--------c
Q 002155 838 HVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ--------A 908 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 908 (959)
......++..|+|||...+. .++.++||||+|+++||+++|..||...... +....+.+...... .
T Consensus 156 -~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07836 156 -TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE----DQLLKIFRIMGTPTESTWPGISQ 230 (284)
T ss_pred -ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHHHHhCCCChhhHHHHhc
Confidence 11233568899999987654 5688999999999999999999998653221 11111111100000 0
Q ss_pred ccccC---cccc----CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLD---PTVL----TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~---~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..... +... ..........+.+++.+|++.||++||+++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 231 LPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred CchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00000 0000 00011224567889999999999999999999863
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=310.33 Aligned_cols=264 Identities=23% Similarity=0.282 Sum_probs=195.8
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecC------
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD------ 747 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 747 (959)
..++|+..+.||+|+||.||+|+.. +++.||+|.+... .......+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 3478999999999999999999865 6899999998643 233345677899999999999999999987543
Q ss_pred CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccc
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFG 827 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 827 (959)
...++||||+.+ ++.+.+... ++...+..++.|++.|++||| +.|++||||||+||+++.++.+||+|||
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~------l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQMD------LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhhc------CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCc
Confidence 356999999964 888877532 677889999999999999999 8899999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCcccc-----------CCchH
Q 002155 828 LARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIE-----------GGNLV 896 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~-----------~~~~~ 896 (959)
.++..... .......++..|+|||.+.+..++.++||||+||++|+|++|+.||........ ...+.
T Consensus 164 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
T cd07850 164 LARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFM 241 (353)
T ss_pred cceeCCCC--CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 99765432 222334678899999999989999999999999999999999999864321000 00000
Q ss_pred HH----HHHHhhcCccc------ccc----CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 897 GW----VFQKMKKGQAA------DVL----DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 897 ~~----~~~~~~~~~~~------~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ........... ... .+.............+.+++.+||+.||++||++.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 242 SRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 00000000000 000 0000001112234567899999999999999999999864
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-33 Score=307.96 Aligned_cols=262 Identities=25% Similarity=0.333 Sum_probs=194.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecC-----Cce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD-----EEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~ 750 (959)
+++|++.++||+|+||.||+|++. +|+.||+|++.... ......+.+|+.++++++||||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999864 68999999986432 23345677899999999999999999887543 357
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++ ++.+++... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~-~l~~~~~~~-----~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 84 YIVQELMET-DLYKLIKTQ-----HLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred EEEehhccc-CHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECccccee
Confidence 999999965 887777543 4888999999999999999999 8999999999999999999999999999997
Q ss_pred ccccccccc--cccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 831 LISACETHV--STDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 831 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
......... .....|+..|+|||.+.+ ..++.++||||+||++|+|++|++||...... .....+........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~----~~~~~~~~~~~~~~ 230 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL----HQLNLILGVLGTPS 230 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHcCCCC
Confidence 654322111 123467899999998654 56889999999999999999999998542110 00111111110000
Q ss_pred c-----------ccccC-ccccCC-----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 A-----------ADVLD-PTVLTA-----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~-----------~~~~~-~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ..... ...... ........+.+++.+||+.||++||++.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 231 QEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 00000 000000 001124568899999999999999999999886
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=298.41 Aligned_cols=242 Identities=24% Similarity=0.312 Sum_probs=185.3
Q ss_pred eeccCCCeEEEEEEcC-CCCEEEEEEccccch---hhHHHHHHHHH---HHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 686 IIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT---QGHREFTAEME---TLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 686 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~---~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
+||+|+||.||+|+.. +++.||+|.+..... .....+..|.. .+...+||+++.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999875 588999998864321 11222334443 3334479999999999998899999999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+|+|.+++.... .+++..+..++.|++.|++||| +.+++||||||+||++++++.++++|||++.......
T Consensus 81 ~~~L~~~i~~~~----~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~-- 151 (279)
T cd05633 81 GGDLHYHLSQHG----VFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (279)
T ss_pred CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--
Confidence 999999987643 5899999999999999999999 8999999999999999999999999999987553221
Q ss_pred ccccccccccccCCCcCC-CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 839 VSTDIAGTFGYIPPEYGQ-SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
.....|+..|+|||... +..++.++||||+||++|||++|..||...... . ...+...... ....
T Consensus 152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~-~~~~~~~~~~------~~~~-- 217 (279)
T cd05633 152 -PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK----D-KHEIDRMTLT------VNVE-- 217 (279)
T ss_pred -ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc----C-HHHHHHHhhc------CCcC--
Confidence 12346899999999876 456899999999999999999999998643221 1 1111111100 0011
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
.+......+.+++.+||+.||++|| +++|++++
T Consensus 218 --~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 218 --LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred --CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 1122345678899999999999999 69999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=291.97 Aligned_cols=242 Identities=25% Similarity=0.326 Sum_probs=194.9
Q ss_pred eccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCH
Q 002155 687 IGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 687 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999976 48899999986532 23345688999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccccc
Q 002155 763 DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD 842 (959)
Q Consensus 763 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 842 (959)
.+++.... .+++..+..++.|++.|++|+| +.+++|+||+|+||+++.++.++|+|||.+....... ....
T Consensus 81 ~~~l~~~~----~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~ 151 (262)
T cd05572 81 WTILRDRG----LFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWT 151 (262)
T ss_pred HHHHhhcC----CCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--cccc
Confidence 99997653 4788899999999999999999 8999999999999999999999999999998764322 2223
Q ss_pred ccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCH
Q 002155 843 IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSK 922 (959)
Q Consensus 843 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (959)
..++..|+|||...+..++.++|+||+|+++|++++|..||.....+ ............. .+ ..+.
T Consensus 152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~-----~~----~~~~ 217 (262)
T cd05572 152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED-----PMEIYNDILKGNG-----KL----EFPN 217 (262)
T ss_pred ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC-----HHHHHHHHhccCC-----CC----CCCc
Confidence 46788999999988888999999999999999999999999754321 1111221111010 00 0111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 002155 923 PMMLKMLRIAGDCLSDNPAMRPT-----MLHVLK 951 (959)
Q Consensus 923 ~~~~~l~~li~~cl~~dP~~Rps-----~~ell~ 951 (959)
.....+.+++.+||+.+|++||+ ++|+++
T Consensus 218 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 218 YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 12457889999999999999999 788776
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-33 Score=299.55 Aligned_cols=261 Identities=29% Similarity=0.339 Sum_probs=197.3
Q ss_pred CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecC--CceEEEEE
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD--EEKLLVYE 755 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e 755 (959)
|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+++++.++|||++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567789999999999999876 48899999987653 33345678899999999999999999999887 78999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++ ++.+++.... ..+++..++.++.|+++|++||| +.|++|+||+|+||++++++.++|+|||.+......
T Consensus 81 ~~~~-~l~~~~~~~~---~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 81 YMDH-DLTGLLDSPE---VKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred cccc-cHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 9975 8888886543 35889999999999999999999 889999999999999999999999999999876543
Q ss_pred cccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc---
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV--- 911 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 911 (959)
.........++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... .....+.+.........+
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07840 154 NSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL----EQLEKIFELCGSPTDENWPGV 229 (287)
T ss_pred CcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHHhCCCchhhcccc
Confidence 3222233456789999997654 45789999999999999999999998643211 111111111100000000
Q ss_pred --------cCccc-----cCCCCHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 --------LDPTV-----LTADSKP-MMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 --------~~~~~-----~~~~~~~-~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..+.. ....... +...+.+++.+||..+|++||++++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 230 SKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred ccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00000 0000011 25578899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=301.02 Aligned_cols=265 Identities=29% Similarity=0.318 Sum_probs=196.6
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCC-----
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE----- 748 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 748 (959)
..++|++.+.||+|+||.||+|..+ +|+.||+|+++... ......+.+|+++++.++|||++++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4678999999999999999999976 58899999986532 223346778999999999999999999886654
Q ss_pred -----ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEE
Q 002155 749 -----EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 749 -----~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 823 (959)
..++||||+++ ++.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||++++++.+||
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESGL---VHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEe
Confidence 78999999976 7777766532 35889999999999999999999 889999999999999999999999
Q ss_pred cccccccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 824 ADFGLARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
+|||.+...............++..|+|||.+.+ ..++.++||||+||++|||++|++||...... .....+.+.
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~----~~~~~~~~~ 233 (302)
T cd07864 158 ADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL----AQLELISRL 233 (302)
T ss_pred CcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHH
Confidence 9999997664332222222345778999997754 35788999999999999999999998643211 111111111
Q ss_pred hhcCccccc-----------cCcccc-----CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKGQAADV-----------LDPTVL-----TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~~~~~~-----------~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......... .++... ..........+.+++.+||+.||++||++++++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 234 CGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred hCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111000000 000000 00011134578899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=304.56 Aligned_cols=244 Identities=26% Similarity=0.416 Sum_probs=193.2
Q ss_pred CCCeeccCCCeEEEEEEcC-CCCEEEEEEcc--c--cchhhHHHHHHHHHHHhcCCCCceeccccceecCCc--eEEEEE
Q 002155 683 KTNIIGDGGFGTVYKAALP-DGKTVAVKKLS--Q--AKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE--KLLVYE 755 (959)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~--~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e 755 (959)
...+||+|+|-+||+|.+. +|..||=-.++ . ..+...+.|..|+++++.++||||+++|+++.+... .-+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 3567999999999999975 46666532221 1 123445789999999999999999999999976654 678999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC-CcEEEccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE-FEAKVADFGLARLISA 834 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~~~~~ 834 (959)
.+..|+|..|.++.. ..+......|+.||++||.|||+. .+.|+|||||-+||+|+.+ |.|||+|+|+|+....
T Consensus 124 L~TSGtLr~Y~kk~~----~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 124 LFTSGTLREYRKKHR----RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred cccCCcHHHHHHHhc----cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 999999999998765 577889999999999999999976 7899999999999999765 8999999999988753
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. +. ....|||.|||||... ..|+..+||||||++++||+|+.+||..-.. .+.+++.+..+.....+.
T Consensus 199 s--~a-ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n-------~AQIYKKV~SGiKP~sl~- 266 (632)
T KOG0584|consen 199 S--HA-KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTN-------PAQIYKKVTSGIKPAALS- 266 (632)
T ss_pred c--cc-ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCC-------HHHHHHHHHcCCCHHHhh-
Confidence 2 22 2368999999999876 7899999999999999999999999853211 233455554443222221
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
... ...+.++|.+|+.. .++|||+.|+++
T Consensus 267 ----kV~---dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 267 ----KVK---DPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred ----ccC---CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 111 12577899999999 899999999986
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=298.95 Aligned_cols=252 Identities=25% Similarity=0.347 Sum_probs=195.4
Q ss_pred CCCCCCeeccCCCeEEEEEEc----CCCCEEEEEEccccch----hhHHHHHHHHHHHhcC-CCCceeccccceecCCce
Q 002155 680 NFCKTNIIGDGGFGTVYKAAL----PDGKTVAVKKLSQAKT----QGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 750 (959)
+|++.+.||+|+||.||.|+. .+|+.||+|++..... ...+.+..|+++++++ +|++|+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999986 3688999999865322 2235677899999999 589999999999988899
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++++|.+++.... .+++..+..++.|+++|+.||| +.|++||||+|+||+++.++++||+|||++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 153 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE----RFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSK 153 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccce
Confidence 99999999999999997643 4778899999999999999999 8999999999999999999999999999997
Q ss_pred ccccccccccccccccccccCCCcCCCC--CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQSG--RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
..............|+..|+|||...+. .++.++||||+|+++|++++|..||...... ..... +.......
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~---~~~~~-~~~~~~~~-- 227 (290)
T cd05613 154 EFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK---NSQAE-ISRRILKS-- 227 (290)
T ss_pred ecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc---ccHHH-HHHHhhcc--
Confidence 6543222222334688899999987653 4678999999999999999999998632111 11111 11111111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
.+. .+......+.+++.+||+.||++|| ++++++.+
T Consensus 228 ----~~~----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 228 ----EPP----YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred ----CCC----CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 011 1122345678899999999999997 67777653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=293.75 Aligned_cols=250 Identities=22% Similarity=0.326 Sum_probs=196.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc-----chhhHHHHHHHHHHHhcCCCCceeccccceecC--Cce
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA-----KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD--EEK 750 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 750 (959)
.+|++.+.||+|+||.||+|++. +++.||+|.+... .......+.+|++++++++||||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46889999999999999999865 5899999987432 123345788899999999999999999988654 457
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++++|.+++.... .+++..+..++.|++.|++||| +.|++|+||||+||+++.++.++|+|||.++
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~----~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG----ALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcccccc
Confidence 89999999999999987643 4778889999999999999999 8899999999999999999999999999997
Q ss_pred cccccc--ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 831 LISACE--THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 831 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
...... ........++..|+|||...+..++.++|||||||++||+++|+.||.... ....+.......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~~-- 225 (264)
T cd06653 155 RIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE-------AMAAIFKIATQP-- 225 (264)
T ss_pred ccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC-------HHHHHHHHHcCC--
Confidence 653211 111123457889999999988889999999999999999999999985421 111111111111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. +..+......+.+++.+||. +|.+||++.+++.+
T Consensus 226 ---~~----~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 226 ---TK----PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred ---CC----CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 00 11122344568889999999 57999999998764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-33 Score=301.08 Aligned_cols=255 Identities=19% Similarity=0.240 Sum_probs=182.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC----CCEEEEEEccccchhhH-----------HHHHHHHHHHhcCCCCceecccc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD----GKTVAVKKLSQAKTQGH-----------REFTAEMETLGKVKHQNLVPLLG 742 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~-----------~~~~~e~~~l~~l~h~niv~~~~ 742 (959)
.++|++.++||+|+||.||+|.+.+ +..+|+|+......... .....+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3679999999999999999998754 34566665432221110 11223344566778999999998
Q ss_pred ceecCC----ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC
Q 002155 743 YCSFDE----EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE 818 (959)
Q Consensus 743 ~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 818 (959)
++.... ..++++|++.. ++.+.+.... ..++..+..++.|++.|++||| +.+|+||||||+||+++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~ 162 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRIK----CKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGN 162 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHhhc----cCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCC
Confidence 765443 34678887744 6666665432 3467788999999999999999 8899999999999999999
Q ss_pred CcEEEccccccccccccccc------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccC
Q 002155 819 FEAKVADFGLARLISACETH------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG 892 (959)
Q Consensus 819 ~~~kl~Dfg~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~ 892 (959)
+.++|+|||+++.+...... ......||+.|+|||+..+..++.++||||+||++|||++|+.||......
T Consensus 163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~--- 239 (294)
T PHA02882 163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHN--- 239 (294)
T ss_pred CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccc---
Confidence 99999999999866422111 112346899999999999999999999999999999999999999653211
Q ss_pred CchHHH----HHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 002155 893 GNLVGW----VFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954 (959)
Q Consensus 893 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 954 (959)
...... ....+..+.. . .......+.+++..||..+|++||+++++++.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 240 GNLIHAAKCDFIKRLHEGKI--------K---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred hHHHHHhHHHHHHHhhhhhh--------c---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 111110 1111111110 0 0112356788899999999999999999998763
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=293.27 Aligned_cols=247 Identities=29% Similarity=0.482 Sum_probs=201.2
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+|++.+.||+|++|.||+|+.. +++.||+|.+..... ...+.+.+|++++++++|||++++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999865 578999999876543 4556788999999999999999999999988999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|.+++.... .+++..++.++.|++.|+.||| +.|++||||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~----~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 81 AENGSLRQIIKKFG----PFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred CCCCcHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 99999999987652 5889999999999999999999 8999999999999999999999999999998765432
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.. .....++..|+|||...+..++.++||||+|+++|++++|..||..... ........ ... .+..
T Consensus 154 ~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-------~~~~~~~~-~~~-----~~~~ 219 (254)
T cd06627 154 KD-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP-------MAALFRIV-QDD-----HPPL 219 (254)
T ss_pred cc-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH-------HHHHHHHh-ccC-----CCCC
Confidence 21 2334678899999998888889999999999999999999999864211 01111111 110 0111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
.......+.+++.+||..+|++||++.+++.
T Consensus 220 ----~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 220 ----PEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred ----CCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 1122446778999999999999999999975
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=289.87 Aligned_cols=251 Identities=27% Similarity=0.392 Sum_probs=203.6
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--hhHHHHHHHHHHHhcCCCCceeccccceecC--CceEEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--QGHREFTAEMETLGKVKHQNLVPLLGYCSFD--EEKLLVY 754 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 754 (959)
+|+..+.||+|++|.||+|... +++.|++|++..... ...+.+.+|+..+++++|||++++++++... ...++||
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4777899999999999999976 689999999865442 4466788999999999999999999999887 8899999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++++|.+++.... .+++.+++.++.|++.|++||| +.+++|||++|+||+++.++.++|+|||.+.....
T Consensus 81 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 81 EYVSGGSLSSLLKKFG----KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 9999999999998654 6889999999999999999999 89999999999999999999999999999987654
Q ss_pred cccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.... ......++..|+|||...+..++.++||||+|+++|++++|..||.... ...........
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~--------- 218 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG------NPMAALYKIGS--------- 218 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------chHHHHHhccc---------
Confidence 3221 1233467889999999988889999999999999999999999986532 11111111110
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.......+......+.+++.+|++.||++||++.+++++
T Consensus 219 ~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 219 SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 000111122235678899999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=303.93 Aligned_cols=255 Identities=22% Similarity=0.311 Sum_probs=191.4
Q ss_pred eeccC--CCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCC
Q 002155 686 IIGDG--GFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNG 760 (959)
Q Consensus 686 ~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 760 (959)
.||+| +||+||+|++. +|+.||+|++.... ....+.+.+|+.+++.++||||++++++|..++..++||||+.++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 99999999875 78999999986432 333467888999999999999999999999999999999999999
Q ss_pred CHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc-
Q 002155 761 SLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV- 839 (959)
Q Consensus 761 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~- 839 (959)
++.+++..... ..+++..+..++.|++.||+||| +.|++||||||+||+++.++.++++||+.+..........
T Consensus 85 ~l~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 85 SANSLLKTYFP--EGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 99999887542 34788899999999999999999 8899999999999999999999999998654332111100
Q ss_pred -----cccccccccccCCCcCCCC--CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc-----
Q 002155 840 -----STDIAGTFGYIPPEYGQSG--RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ----- 907 (959)
Q Consensus 840 -----~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----- 907 (959)
.....++..|+|||++.+. .++.++||||+||++|||++|+.||....... ..........
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~ 232 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ-------MLLQKLKGPPYSPLD 232 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH-------HHHHHhcCCCCCCcc
Confidence 0011345679999998764 47899999999999999999999986532110 0000000000
Q ss_pred -------------------------------cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 -------------------------------AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 -------------------------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
................+...+.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 233 ITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred ccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 000000111112234466788999999999999999999999864
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=296.00 Aligned_cols=260 Identities=27% Similarity=0.320 Sum_probs=198.9
Q ss_pred CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
|++.+.||+|++|.||+|+.. +++.+|+|++..... .....+..|+++++.++||+++++++++..++..++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567788999999999999875 688999998865432 23456788999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++ ++.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~-~l~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~- 152 (283)
T cd05118 81 DT-DLYKLIKDRQ---RGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV- 152 (283)
T ss_pred CC-CHHHHHHhhc---ccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-
Confidence 75 8888887643 35889999999999999999999 8899999999999999999999999999997665432
Q ss_pred cccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc--------
Q 002155 838 HVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA-------- 908 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 908 (959)
.......++..|+|||...+. .++.++||||+|+++|++++|+.||...... +....+.........
T Consensus 153 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd05118 153 RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI----DQLFKIFRTLGTPDPEVWPKFTS 228 (283)
T ss_pred ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHcCCCchHhcccchh
Confidence 122234578899999987766 7899999999999999999999998543211 011111111000000
Q ss_pred ----ccccCcc----ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ----ADVLDPT----VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ----~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.....+. ............+.+++.+||++||.+||++++++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0000000 0011122356678899999999999999999999864
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=298.62 Aligned_cols=255 Identities=27% Similarity=0.326 Sum_probs=197.8
Q ss_pred CCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEccccc----hhhHHHHHHHHHHHhcC-CCCceeccccceecCCce
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQAK----TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 750 (959)
+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+..|+++++++ +||+|+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4677889999999999999742 57889999986432 22334577899999999 599999999999988999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++|+|.+++.... .+++..+..++.|+++|++||| +.+++||||+|+||+++.++.++++|||++.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE----HFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC----CcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECcccc
Confidence 99999999999999987543 4788899999999999999999 8999999999999999999999999999987
Q ss_pred ccccccccccccccccccccCCCcCCCCC--CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQSGR--STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
..............|+..|+|||...+.. .+.++||||+|+++|||++|..||...... .............
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~----~~~~~~~~~~~~~-- 227 (288)
T cd05583 154 EFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ----NSQSEISRRILKS-- 227 (288)
T ss_pred ccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc----chHHHHHHHHHcc--
Confidence 65433222223346788999999877655 688999999999999999999998542111 1111111111111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
.+. .+......+.+++.+||+.||++|||+.++...|+.
T Consensus 228 ----~~~----~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 228 ----KPP----FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ----CCC----CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 011 111233467789999999999999998887766654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=320.99 Aligned_cols=257 Identities=28% Similarity=0.449 Sum_probs=206.8
Q ss_pred CCCCCeeccCCCeEEEEEEcC----C----CCEEEEEEcccc-chhhHHHHHHHHHHHhcC-CCCceeccccceecCCce
Q 002155 681 FCKTNIIGDGGFGTVYKAALP----D----GKTVAVKKLSQA-KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~----~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 750 (959)
..+.+.+|+|.||.|++|... . ...||||.++.. ...+.+.+..|+++|+.+ +||||+.++|+|..++..
T Consensus 298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~ 377 (609)
T KOG0200|consen 298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPL 377 (609)
T ss_pred ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCce
Confidence 345668999999999999742 1 357999998754 335667899999999999 599999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhc---C-------Cc--cccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC
Q 002155 751 LLVYEYMVNGSLDLWLRNRT---G-------SL--EVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE 818 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~---~-------~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 818 (959)
++|+||+..|+|..+++... . .. ..+...+.+.++.|||.|++||+ +.++||||+.++|||++.+
T Consensus 378 ~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRNVLi~~~ 454 (609)
T KOG0200|consen 378 YVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAARNVLITKN 454 (609)
T ss_pred EEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhhhhEEecCC
Confidence 99999999999999998876 0 11 23788899999999999999999 8899999999999999999
Q ss_pred CcEEEcccccccccccccccccccccc--cccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCch
Q 002155 819 FEAKVADFGLARLISACETHVSTDIAG--TFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNL 895 (959)
Q Consensus 819 ~~~kl~Dfg~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~ 895 (959)
..+||+|||+|+.......+......+ ...|||||.+....|+.++|||||||++||++| |..||.... .
T Consensus 455 ~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~-------~ 527 (609)
T KOG0200|consen 455 KVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP-------P 527 (609)
T ss_pred CEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC-------c
Confidence 999999999998765544443332222 347999999999999999999999999999999 788875411 0
Q ss_pred HHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 896 VGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
...+.+.++.+...+ .+..+..++.++|+.||+.+|++||++.++.+.++..
T Consensus 528 ~~~l~~~l~~G~r~~---------~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 528 TEELLEFLKEGNRME---------QPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred HHHHHHHHhcCCCCC---------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 111233444443222 2233456788999999999999999999999999884
|
|
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-33 Score=306.70 Aligned_cols=267 Identities=30% Similarity=0.349 Sum_probs=195.3
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcC-CCCceeccccceecC--Cce
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFD--EEK 750 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~--~~~ 750 (959)
..++|++.+.||+|+||.||+|.+. +++.||+|++... .......+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3467888999999999999999876 5889999988542 223345577899999999 999999999988654 357
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||++ ++|..++... .+++..+..++.|++.||+||| +.|++||||||+||+++.++.+||+|||.+.
T Consensus 85 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN-----ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred EEEecccc-cCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 99999997 5998888653 4778899999999999999999 8999999999999999999999999999997
Q ss_pred ccccccc----cccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHH-------
Q 002155 831 LISACET----HVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGW------- 898 (959)
Q Consensus 831 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~------- 898 (959)
....... .......|+..|+|||.+.+ ..++.++||||||+++|||++|+.||...............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 6543221 12233468889999997654 45789999999999999999999998543211100000000
Q ss_pred HHHHhhcCcccccc------CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 899 VFQKMKKGQAADVL------DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 899 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
....+......... ...............+.+++.+||+.||++|||+.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000000000000 0000000111134578899999999999999999999875
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-33 Score=301.46 Aligned_cols=263 Identities=24% Similarity=0.286 Sum_probs=193.8
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
++|++.+.||+|++|.||+|+++ +++.||+|.+..... ...+.+.+|++++++++|||++++++++..+...++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888999999999999999875 688999998864322 233567889999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-CCcEEEccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE-EFEAKVADFGLARLISA 834 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~ 834 (959)
|++ +++.+++..... ...++..+..++.||+.|++||| +.+++||||+|+||+++. ++.+|++|||.+.....
T Consensus 82 ~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 82 YLD-LDLKKHMDSSPD--FAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred ccc-ccHHHHHHhCCC--CCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 996 588888765432 23577888899999999999999 889999999999999985 56799999999976533
Q ss_pred ccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc---
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD--- 910 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 910 (959)
.. .......+++.|+|||.+.+ ..++.++||||+|+++|+|+||++||...... +....+...........
T Consensus 156 ~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~ 230 (294)
T PLN00009 156 PV-RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI----DELFKIFRILGTPNEETWPG 230 (294)
T ss_pred Cc-cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCChhhccc
Confidence 21 11123356889999998765 45789999999999999999999998643211 00000000000000000
Q ss_pred --------ccCccccCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 --------VLDPTVLTA----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 --------~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...+..... ........+.+++.+|++.+|++||++.+++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 231 VTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred cccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000 011233457889999999999999999999864
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-32 Score=297.93 Aligned_cols=260 Identities=21% Similarity=0.249 Sum_probs=190.6
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCC
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGS 761 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 761 (959)
++.+|.|+++.||+++. +++.||||++... .....+.+.+|+++++.++||||+++++++..++..+++|||+++|+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 34455555555555554 6899999998654 34455678999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc----
Q 002155 762 LDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET---- 837 (959)
Q Consensus 762 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~---- 837 (959)
+.++++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+|++|||.+........
T Consensus 86 l~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 86 CEDLLKTHFP--EGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred HHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence 9999986532 24788899999999999999999 88999999999999999999999999998865532111
Q ss_pred --cccccccccccccCCCcCCC--CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh----cC---
Q 002155 838 --HVSTDIAGTFGYIPPEYGQS--GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK----KG--- 906 (959)
Q Consensus 838 --~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----~~--- 906 (959)
.......++..|+|||++.+ ..++.++||||+||++|||++|..||....... ...+....... ..
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 237 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ---MLLEKVRGTVPCLLDKSTYP 237 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhccCccccccCchh
Confidence 01122346778999998765 357889999999999999999999996532110 00000000000 00
Q ss_pred ----cccc----ccCcc----ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 ----QAAD----VLDPT----VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 ----~~~~----~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.... ..++. ............+.+++.+||+.||++|||+++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 238 LYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred hhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0000 00000 0111223445678899999999999999999999874
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-33 Score=306.38 Aligned_cols=263 Identities=25% Similarity=0.331 Sum_probs=196.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceec----CCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSF----DEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~ 750 (959)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 468999999999999999999865 68999999986532 2334567789999999999999999998753 3467
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+. ++|.+++.... .+++..+..++.|++.||+||| +.+++||||||+||++++++.+||+|||++.
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ----PLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEEehhh-hhHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccce
Confidence 99999996 58988886543 4889999999999999999999 8899999999999999999999999999997
Q ss_pred ccccccc---cccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH----
Q 002155 831 LISACET---HVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK---- 902 (959)
Q Consensus 831 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~---- 902 (959)
....... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... .....+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~----~~~~~~~~~~g~~ 231 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV----HQLKLILSVLGSP 231 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH----HHHHHHHHHhCCC
Confidence 6533221 11123468889999998765 45789999999999999999999998543211 001100000
Q ss_pred -------hhcCccccc---cC---ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 -------MKKGQAADV---LD---PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 -------~~~~~~~~~---~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......... .. +.............+.+++.+||+.+|++||++++++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 232 SEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000000000 00 000000012235678899999999999999999999874
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=296.40 Aligned_cols=254 Identities=25% Similarity=0.397 Sum_probs=193.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC-CCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.+.||+|+||.||+|.+.+ ++.||||.+.... ......+..|+..+.+. .||||+++++++..+...++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 3568889999999999999999864 8999999987543 22334566677766666 4999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||++ +++.++..... ..+++..+..++.|++.|++|||. ..|++||||+|+||++++++.+||+|||.+.....
T Consensus 94 e~~~-~~l~~l~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 94 ELMS-TCLDKLLKRIQ---GPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred eccC-cCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 9985 47777776543 268889999999999999999993 25999999999999999999999999999876542
Q ss_pred ccccccccccccccccCCCcCCCCC----CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGR----STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
... .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||...... ........... .
T Consensus 168 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~-~-- 236 (296)
T cd06618 168 SKA--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE------FEVLTKILQEE-P-- 236 (296)
T ss_pred CCc--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH------HHHHHHHhcCC-C--
Confidence 221 12235778999999887554 788999999999999999999998542111 11111111111 0
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 953 (959)
+... ........+.+++.+||+.||++||++.+++++-
T Consensus 237 ---~~~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 237 ---PSLP--PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred ---CCCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 0000 0112345688999999999999999999998753
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=306.72 Aligned_cols=261 Identities=27% Similarity=0.328 Sum_probs=199.4
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCC-----ceE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE-----EKL 751 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~ 751 (959)
+|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.... ..|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5788899999999999999975 48999999987543 334567889999999999999999999987765 789
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||++ ++|.+++.... .+++..++.++.|++.|++||| +.|++||||||+||+++.++.++|+|||.+..
T Consensus 81 lv~e~~~-~~l~~~l~~~~----~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ----PLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEecchh-hhHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 9999997 48888886543 6889999999999999999999 89999999999999999999999999999987
Q ss_pred cccccc--cccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc-
Q 002155 832 ISACET--HVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ- 907 (959)
Q Consensus 832 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 907 (959)
...... .......++..|+|||.+.+. .++.++||||+|+++|+|++|.+||...... +....+........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~~~~~ 228 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI----DQLNLIVEVLGTPSE 228 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH----HHHHHHHHhcCCCCh
Confidence 654321 122334678899999998887 7899999999999999999999998653211 00111111000000
Q ss_pred ----------cccccC------ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 ----------AADVLD------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ----------~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...... +.............+.+++.+||+.+|++||++++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 229 EDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred hHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 000000 000000011234567899999999999999999999985
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=292.93 Aligned_cols=251 Identities=23% Similarity=0.353 Sum_probs=195.9
Q ss_pred CCCCCCeeccCCCeEEEEEEcCC-CCEEEEEEcccc-----chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQA-----KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
+|.+.+.||+|+||.||+|++.. +..+++|.++.. ......++..|+.+++.++||||+++++++......++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47888999999999999998753 445556655432 122334566799999999999999999999988999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.++++........+++..++.++.|++.|+.||| +.|++|+|++|+||++++ +.++++|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999999764444456899999999999999999999 899999999999999975 579999999987654
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
... .......+++.|+|||...+..++.++|+||+|+++|++++|..||.... ........ ..+. .
T Consensus 157 ~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-------~~~~~~~~-~~~~-----~ 222 (260)
T cd08222 157 GSC-DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-------FLSVVLRI-VEGP-----T 222 (260)
T ss_pred CCc-ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-------HHHHHHHH-HcCC-----C
Confidence 321 22233457889999999888888999999999999999999999985321 11111111 1111 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+ .........+.+++.+||+.||++||++.|++++
T Consensus 223 ~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 223 P----SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred C----CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 1 1123445578889999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=291.12 Aligned_cols=244 Identities=26% Similarity=0.358 Sum_probs=193.6
Q ss_pred eccCCCeEEEEEEcC-CCCEEEEEEccccch---hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCH
Q 002155 687 IGDGGFGTVYKAALP-DGKTVAVKKLSQAKT---QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 687 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
||+|+||.||+|++. +|+.||+|.+..... ...+.+.+|++++++++|||++++++.+..+...|+||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999986 489999999865433 3456688899999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc-----
Q 002155 763 DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET----- 837 (959)
Q Consensus 763 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~----- 837 (959)
.+++.... .+++..++.++.|+++||+||| +.+++||||+|+||++++++.++|+|||++........
T Consensus 81 ~~~l~~~~----~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 81 ASLLENVG----SLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 99997643 5788999999999999999999 89999999999999999999999999999875432211
Q ss_pred --cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 838 --HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 838 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
.......++..|+|||...+..++.++||||||+++||+++|..||...... . .......+... .+.
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-------~-~~~~~~~~~~~---~~~ 222 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-------E-IFQNILNGKIE---WPE 222 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-------H-HHHHHhcCCcC---CCc
Confidence 1222345788999999988888999999999999999999999998643211 1 11122111100 010
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 953 (959)
.......+.+++.+||+.+|++||++.++.+.|
T Consensus 223 -----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 223 -----DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred -----cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 111245678999999999999999994444433
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=277.10 Aligned_cols=250 Identities=28% Similarity=0.409 Sum_probs=192.2
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccch-hhHHHHHHHHHH-HhcCCCCceeccccceecCCceEEEEEeccCCC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT-QGHREFTAEMET-LGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGS 761 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 761 (959)
..||.|+||+|++-.++ .|+.+|||+++.... .+..++..|.+. ++.-++||||++||.+..++..|+.||.|+ .+
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~S 148 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-IS 148 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-hh
Confidence 45999999999998765 799999999986543 556677777765 444579999999999999999999999995 47
Q ss_pred HHHHHhh-hcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccc
Q 002155 762 LDLWLRN-RTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS 840 (959)
Q Consensus 762 L~~~l~~-~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 840 (959)
++.+... ..-....+++.-.-+|....+.||.||.+ ...|+|||+||+|||++..|.|||||||.+..+-. ....
T Consensus 149 lDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~--SiAk 224 (361)
T KOG1006|consen 149 LDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD--SIAK 224 (361)
T ss_pred HHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHH--HHHh
Confidence 7554432 11122457888888888889999999986 67899999999999999999999999999977642 2233
Q ss_pred ccccccccccCCCcCCCC--CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc-
Q 002155 841 TDIAGTFGYIPPEYGQSG--RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL- 917 (959)
Q Consensus 841 ~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 917 (959)
+.-+|...|||||.+... .|+.+|||||+|+++||+.||..|++.. .+ +.+++...... +|+..
T Consensus 225 T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w-~s---------vfeql~~Vv~g---dpp~l~ 291 (361)
T KOG1006|consen 225 TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKW-DS---------VFEQLCQVVIG---DPPILL 291 (361)
T ss_pred hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchH-HH---------HHHHHHHHHcC---CCCeec
Confidence 444788999999977543 4899999999999999999999998652 11 33333322111 23222
Q ss_pred -CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 918 -TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 918 -~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+.........|.+++.-|+.+|-..||++.+++++
T Consensus 292 ~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 292 FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred CcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 22334567788899999999999999999998753
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-32 Score=293.19 Aligned_cols=263 Identities=27% Similarity=0.313 Sum_probs=194.5
Q ss_pred CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch-hhHHHHHHHHHHHhcCC-CCceeccccceecCCceEEEEEec
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT-QGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
|++.+.||+|+||+||+|+.. +++.||+|++..... .......+|+..+++++ |||++++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567889999999999999976 478899999865432 22233457899999999 999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
+|++.+++.... ...+++..+..++.|+++++.||| +.+++|+||+|+||++++++.++|+|||.+........
T Consensus 81 -~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 81 -EGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred -CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC
Confidence 789998887654 235789999999999999999999 88999999999999999999999999999976543221
Q ss_pred cccccccccccccCCCcCC-CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCch---------HHHHHHHhhcCc
Q 002155 838 HVSTDIAGTFGYIPPEYGQ-SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNL---------VGWVFQKMKKGQ 907 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~---------~~~~~~~~~~~~ 907 (959)
.....++..|+|||.+. ...++.++|+||||+++|||++|++||............ ..|.........
T Consensus 155 --~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07830 155 --YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASK 232 (283)
T ss_pred --cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcc
Confidence 22346788999999764 445789999999999999999999998543211000000 000000000000
Q ss_pred cccccCccccCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 AADVLDPTVLTA----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.... .+..... ........+.+++.+||+.||++||+++|++.+
T Consensus 233 ~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 233 LGFR-FPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccc-ccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 0000 0000000 001113568899999999999999999999864
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=294.68 Aligned_cols=249 Identities=27% Similarity=0.365 Sum_probs=201.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCC-CCceeccccceecCCceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv 753 (959)
++|.+.+.||+|+||.||+|+.. +++.||+|++... .....+.+..|++++++++ ||||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888999999999999999875 6899999998653 2233456788999999998 99999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.... .+++..++.++.|++.|++||| +.|++|+||+|+||+++.++.++++|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~----~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 81 LEYAPNGELLQYIRKYG----SLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EcCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 99999999999998653 5899999999999999999999 8999999999999999999999999999987654
Q ss_pred cccc-------------------cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCc
Q 002155 834 ACET-------------------HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGN 894 (959)
Q Consensus 834 ~~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~ 894 (959)
.... .......++..|+|||...+..++.++||||+|+++|++++|..||......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----- 228 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY----- 228 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH-----
Confidence 3221 1122345788999999988888999999999999999999999998653210
Q ss_pred hHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCH----HHHHHH
Q 002155 895 LVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM----LHVLKF 952 (959)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~----~ell~~ 952 (959)
. ..+...... . ..+......+.+++.+||+.+|++||++ ++++++
T Consensus 229 --~-~~~~~~~~~---~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 229 --L-TFQKILKLE---Y-------SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred --H-HHHHHHhcC---C-------CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 1 111111110 0 0111224567899999999999999999 887754
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=303.05 Aligned_cols=265 Identities=25% Similarity=0.321 Sum_probs=197.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecC-----Cc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD-----EE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~ 749 (959)
.++|.+.+.||+|+||.||+|+.. +++.||||.+... .......+.+|+.+++.++||||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457889999999999999999865 6899999988643 222345567899999999999999999988644 34
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.++||||+. ++|.+++.... .+++..+..++.|++.|+.||| +.+++||||||+||+++.++.+||+|||++
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ----TLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 799999996 68988886543 5888999999999999999999 889999999999999999999999999999
Q ss_pred cccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHh-----
Q 002155 830 RLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKM----- 903 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~----- 903 (959)
....... .......++..|+|||.+.. ..++.++|||||||++|+|++|++||...... ..........
T Consensus 156 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~ 230 (337)
T cd07858 156 RTTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV----HQLKLITELLGSPSE 230 (337)
T ss_pred cccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH----HHHHHHHHHhCCCCh
Confidence 7654322 22233467889999997654 46889999999999999999999998543110 0000000000
Q ss_pred ------hcCc-------cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhh
Q 002155 904 ------KKGQ-------AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF--LKEI 956 (959)
Q Consensus 904 ------~~~~-------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~--L~~l 956 (959)
.... .....++.. ..........+.+++.+||+.||++||+++|++++ ++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 231 EDLGFIRNEKARRYIRSLPYTPRQSF-ARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred HHhhhcCchhhhHHHHhcCcccccCH-HHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 0000 000000000 00011244567899999999999999999999987 5443
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=294.70 Aligned_cols=260 Identities=27% Similarity=0.351 Sum_probs=193.7
Q ss_pred CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--hhHHHHHHHHHHHhcC---CCCceeccccceecCCc-----
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--QGHREFTAEMETLGKV---KHQNLVPLLGYCSFDEE----- 749 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~----- 749 (959)
|++.+.||+|+||.||+|+++ +++.||+|++..... .....+.+|+.+++++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567789999999999999986 489999999864322 2233455677766655 69999999999987776
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.+++|||+.+ ++.+++..... ..+++..++.++.|++.|++||| +.+++|+|++|+||++++++.++|+|||.+
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~--~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPK--PGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eEEEehhccc-CHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCcc
Confidence 8999999975 89888876432 25889999999999999999999 889999999999999999999999999999
Q ss_pred cccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 830 RLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
....... ......++..|+|||...+..++.++||||+||++|||++|.+||...... +....+.+........
T Consensus 155 ~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 228 (287)
T cd07838 155 RIYSFEM--ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA----DQLDKIFDVIGLPSEE 228 (287)
T ss_pred eeccCCc--ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH----HHHHHHHHHcCCCChH
Confidence 7664321 112335788999999998888999999999999999999999998643211 1111111111000000
Q ss_pred c----------ccC---ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 910 D----------VLD---PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 910 ~----------~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ... +.............+.+++.+||+.||++||++.+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 229 EWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred hcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0 000 000011122345667899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=299.06 Aligned_cols=267 Identities=25% Similarity=0.296 Sum_probs=191.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCC------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE------ 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 748 (959)
.++|++.+.||+|+||.||+|+.. +++.||||.+.... ......+.+|++++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 457889999999999999999875 68999999886432 222334567999999999999999999886543
Q ss_pred --ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 749 --EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 749 --~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
..++||||+++ ++.+++.... ..+++.+++.++.|++.|++||| +.|++|+||||+||+++.++.+||+||
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKN---VKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcC
Confidence 34999999965 8888776543 35789999999999999999999 889999999999999999999999999
Q ss_pred cccccccccccc---ccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 827 GLARLISACETH---VSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 827 g~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
|.+......... ......++..|+|||...+. .++.++||||+|+++|||++|..||....... .......+...
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~-~~~~~~~~~~~ 242 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQH-QLTLISQLCGS 242 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCC
Confidence 999765432211 11233567889999987654 46889999999999999999999986532210 00000000000
Q ss_pred hhcC--------cccccc-CccccCCC------CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKG--------QAADVL-DPTVLTAD------SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~--------~~~~~~-~~~~~~~~------~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.... ...... .+...... ..-....+.+++.+||..||++||+++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 243 ITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred CChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 0000 000000 00000000 00012356789999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=306.49 Aligned_cols=255 Identities=26% Similarity=0.370 Sum_probs=210.4
Q ss_pred HHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceec-----CC
Q 002155 676 EATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSF-----DE 748 (959)
Q Consensus 676 ~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~-----~~ 748 (959)
..++.|++.++||+|.+|.||+++.+ +++.+|||+...... ..+++..|+.+++.. +|||++.++|+|.. ++
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 34677889999999999999999854 688899998765433 345677889988887 69999999998843 57
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
+.|+|||||.+|+..|+++... ...+.|..+..|+..++.|+.||| ...++|||||-.|||++.++.||++|||+
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFGv 169 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFGV 169 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeeee
Confidence 8999999999999999998866 457899999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCCC-----CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHh
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSG-----RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKM 903 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (959)
+..... +........||+.|||||++... .|+.++|+||+|++..||--|.+|+....+- +..+
T Consensus 170 SaQlds-T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm----------raLF 238 (953)
T KOG0587|consen 170 SAQLDS-TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM----------RALF 238 (953)
T ss_pred eeeeec-ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh----------hhhc
Confidence 987754 44455667899999999987654 4678999999999999999999997553322 0000
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. -...|+.....+..+..++.++|..|+.+|.++||++.+++++
T Consensus 239 ~-----IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 239 L-----IPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred c-----CCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 0 1112333444567888999999999999999999999998864
|
|
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-32 Score=292.26 Aligned_cols=242 Identities=24% Similarity=0.325 Sum_probs=185.6
Q ss_pred eeccCCCeEEEEEEcC-CCCEEEEEEccccch---hhHHHHHHH---HHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 686 IIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT---QGHREFTAE---METLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 686 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e---~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
+||+|+||.||+|+.. +++.||+|.+..... .....+..| .+.++...||+|+++++++..++..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999865 588999998864321 111123333 344555689999999999999999999999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+|+|.+++.... .+++..+..++.|+++|++||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 81 g~~L~~~l~~~~----~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~-- 151 (278)
T cd05606 81 GGDLHYHLSQHG----VFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (278)
T ss_pred CCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--
Confidence 999999886543 5899999999999999999999 8899999999999999999999999999987553221
Q ss_pred ccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 839 VSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
.....|+..|+|||.+.++ .++.++||||+|+++|||++|+.||....... . ......... ..+..
T Consensus 152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~----~-~~~~~~~~~------~~~~~- 218 (278)
T cd05606 152 -PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD----K-HEIDRMTLT------MAVEL- 218 (278)
T ss_pred -CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccc----h-HHHHHHhhc------cCCCC-
Confidence 2234689999999998754 68999999999999999999999986532110 0 111111110 01111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
+......+.+++.+|+..+|++|| ++.+++++
T Consensus 219 ---~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 219 ---PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred ---CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 111245688899999999999999 99999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=286.78 Aligned_cols=241 Identities=24% Similarity=0.298 Sum_probs=185.9
Q ss_pred CeeccCCCeEEEEEEcC-CCCEEEEEEccccch---hhHHHHHHHHHH-HhcCCCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT---QGHREFTAEMET-LGKVKHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
+.||+|+||.||+|+.. +++.||+|++..... .....+..|... ....+|||++++++++..++..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46999999999999875 588999999865432 122234445444 4455899999999999999999999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
++|.++++... .+++..+..++.|++.||.||| +.+++||||+|+||++++++.++|+|||++.....
T Consensus 82 ~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----- 149 (260)
T cd05611 82 GDCASLIKTLG----GLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----- 149 (260)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccc-----
Confidence 99999997643 5788999999999999999999 88999999999999999999999999999875432
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (959)
.....++..|+|||...+..++.++||||+|+++||+++|..||...... . +...+...... .+. .
T Consensus 150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~-~~~~~~~~~~~---~~~---~ 215 (260)
T cd05611 150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD-------A-VFDNILSRRIN---WPE---E 215 (260)
T ss_pred cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH-------H-HHHHHHhcccC---CCC---c
Confidence 22346788999999988888899999999999999999999998643211 1 11122111110 000 0
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 920 DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
....+...+.+++.+||+.||++||++.++.+
T Consensus 216 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 216 VKEFCSPEAVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred ccccCCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence 11123456889999999999999997754443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-32 Score=304.20 Aligned_cols=263 Identities=24% Similarity=0.304 Sum_probs=191.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecC---------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD--------- 747 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------- 747 (959)
..+|++.+.||.|+||.||+|... +|+.||+|++........+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 367889999999999999999875 6889999998765555567788999999999999999999876543
Q ss_pred -----CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-CCcE
Q 002155 748 -----EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE-EFEA 821 (959)
Q Consensus 748 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~ 821 (959)
...++||||++ ++|.+++... .+++..++.++.|+++|+.||| +.|++||||||+||+++. ++.+
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG-----PLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceE
Confidence 34789999997 5898888643 3788999999999999999999 889999999999999974 5678
Q ss_pred EEcccccccccccccccc--cccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCch---
Q 002155 822 KVADFGLARLISACETHV--STDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNL--- 895 (959)
Q Consensus 822 kl~Dfg~~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~--- 895 (959)
+++|||.+.......... .....++..|+|||.+.+ ..++.++||||+||++|||++|+.||............
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 999999997653221111 122356889999997544 56788999999999999999999999643211000000
Q ss_pred ------------HHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 896 ------------VGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 896 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........... ......+ ...........+.+++.+||+.||++||+++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRND-GGEPRRP--LRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhc-ccccCCC--HHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 00000000000 0000000 000011233567889999999999999999999853
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.6e-32 Score=301.65 Aligned_cols=262 Identities=26% Similarity=0.302 Sum_probs=194.5
Q ss_pred cCCCC-CCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhh--------------HHHHHHHHHHHhcCCCCceecccc
Q 002155 679 NNFCK-TNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQG--------------HREFTAEMETLGKVKHQNLVPLLG 742 (959)
Q Consensus 679 ~~f~~-~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~~~~ 742 (959)
++|.. .+.||+|+||.||+|.++ +++.||||++....... ...+.+|+++++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45553 577999999999999865 68999999886432211 124678999999999999999999
Q ss_pred ceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEE
Q 002155 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAK 822 (959)
Q Consensus 743 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 822 (959)
++..++..++||||++ |+|.+++.... .+++.....++.|++.|++||| +.|++||||+|+||+++.++.++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~----~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKI----RLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCEE
Confidence 9999999999999997 58999886543 4788999999999999999999 89999999999999999999999
Q ss_pred Eccccccccccccc-------------ccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCc
Q 002155 823 VADFGLARLISACE-------------THVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFK 888 (959)
Q Consensus 823 l~Dfg~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~ 888 (959)
++|||.+....... ........++..|+|||.+.+. .++.++||||+||++|||++|.+||.....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999997654110 1111223467889999988664 468999999999999999999999864321
Q ss_pred cccCCchHHHHHHHhhcCccccc-----------cC---ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 889 DIEGGNLVGWVFQKMKKGQAADV-----------LD---PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......+...........+ .. +.............+.+++.+||+.+|++||+++|++.+
T Consensus 240 ----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 240 ----IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred ----HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 1112222221111110000 00 000000011234567899999999999999999999864
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.9e-32 Score=295.90 Aligned_cols=244 Identities=32% Similarity=0.445 Sum_probs=191.8
Q ss_pred CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
|...+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+++++.++|||++++++++.++...|+||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555678999999999999865 68899999886432 23345678899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+. |++.+++.... .++++.++..++.|++.|++||| +.|++||||+|+||+++.++.++|+|||.+.....
T Consensus 103 ~~-~~l~~~l~~~~---~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-- 173 (313)
T cd06633 103 CL-GSASDLLEVHK---KPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-- 173 (313)
T ss_pred CC-CCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCC--
Confidence 96 57878776543 35789999999999999999999 88999999999999999999999999999864321
Q ss_pred ccccccccccccccCCCcCC---CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 837 THVSTDIAGTFGYIPPEYGQ---SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.....|+..|+|||.+. ...++.++|||||||++|||++|..||..... ...+....... .
T Consensus 174 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~-------~~~~~~~~~~~-~----- 237 (313)
T cd06633 174 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------MSALYHIAQND-S----- 237 (313)
T ss_pred ---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHHhcC-C-----
Confidence 22346788999999874 45688899999999999999999999854311 11111111111 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+... .......+.+++.+||+.+|++||++.+++++
T Consensus 238 ~~~~---~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 238 PTLQ---SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred CCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111 11223457889999999999999999999864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.1e-32 Score=297.15 Aligned_cols=247 Identities=30% Similarity=0.433 Sum_probs=193.4
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.|...+.||+|+||.||+|+.. +++.+|+|.+... ......++.+|+++++.++|+|++++++++..+...++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 3666778999999999999975 5788999987632 22334567789999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+. |++.+++.... ..+++.++..++.|++.|+.||| +.+++||||+|+||+++.++.++++|||++......
T Consensus 96 ~~~-~~l~~~~~~~~---~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 96 YCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred ccC-CCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 996 58877776433 34788999999999999999999 889999999999999999999999999998765321
Q ss_pred cccccccccccccccCCCcCC---CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQ---SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
....++..|+|||.+. ...++.++||||+||++|||++|..||..... ..... .......
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~~~-~~~~~~~---- 231 (308)
T cd06634 169 -----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------MSALY-HIAQNES---- 231 (308)
T ss_pred -----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH-------HHHHH-HHhhcCC----
Confidence 2345788999999864 35678899999999999999999999754211 11111 1111110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 954 (959)
+.. ........+.+++.+||+.+|++||++++++++-.
T Consensus 232 -~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 232 -PAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred -CCc---CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 111 11234456788999999999999999999987643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-32 Score=296.24 Aligned_cols=248 Identities=24% Similarity=0.358 Sum_probs=202.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
...|.+.+.||+|.|++|..|+.. ++..||+|.+.+.. ......+.+|+++|..++|||||+++.+.......|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 456888999999999999999865 68999999987653 333445889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+.+|.+++++.... ...+..+..++.|+.+|++||| +++|||||+|++||+++.+..+||+|||++..+..
T Consensus 135 eya~~ge~~~yl~~~g----r~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHG----RMKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred EeccCchhHHHHHhcc----cchhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeecc
Confidence 9999999999998765 3455788899999999999999 89999999999999999999999999999988763
Q ss_pred ccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
......++|++.|.|||+..+.+| ++++|+||+|+++|-++.|..||+...-.. .++....+... -
T Consensus 208 --~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~--------Lr~rvl~gk~r---I 274 (596)
T KOG0586|consen 208 --GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE--------LRPRVLRGKYR---I 274 (596)
T ss_pred --cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc--------ccchheeeeec---c
Confidence 334456799999999999998887 689999999999999999999997532110 01111111100 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
|.. .....-+++++++..+|.+|++.+++.+.
T Consensus 275 p~~-------ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 275 PFY-------MSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred cce-------eechhHHHHHHhhccCccccCCHHHhhhh
Confidence 111 12234567888899999999999999875
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.1e-32 Score=297.54 Aligned_cols=264 Identities=28% Similarity=0.331 Sum_probs=191.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh--hHHHHHHHHHHHhcCCCCceeccccceecCC------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ--GHREFTAEMETLGKVKHQNLVPLLGYCSFDE------ 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 748 (959)
.++|++.++||+|+||.||+|++. +++.||+|++...... ....+.+|+++++.++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999875 6889999988643322 2345678999999999999999999875433
Q ss_pred --ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 749 --EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 749 --~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
..++||||+++ ++...+.... ..+++.++..++.|+++|++||| +.|++||||||+||++++++.++|+||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~---~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS---VKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcC
Confidence 46999999965 6777665432 35899999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccc----------cccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCch
Q 002155 827 GLARLISACETHV----------STDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNL 895 (959)
Q Consensus 827 g~~~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~ 895 (959)
|++.......... .....+++.|+|||.+.+ ..++.++||||+||++|||++|++||....... .
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~----~ 235 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID----Q 235 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH----H
Confidence 9997654321111 122346788999997655 457899999999999999999999986432210 0
Q ss_pred HHHHHHHhhcCcc---------cccc----C---ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 896 VGWVFQKMKKGQA---------ADVL----D---PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 896 ~~~~~~~~~~~~~---------~~~~----~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...+......... .... . +.............+.+++.+|+..||++|||+.|++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 236 LHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 1111110000000 0000 0 000000001122567899999999999999999998763
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-32 Score=280.62 Aligned_cols=240 Identities=27% Similarity=0.335 Sum_probs=193.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh---hHHHHHHHHHHHhcC-CCCceeccccceecCCceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ---GHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 753 (959)
.+|.+..+||+|+||+|-.|..+ +.+.||||+++++..- +.+--..|-++++-- +-|.+++++..|+.-+..|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46888999999999999999866 4678999998875422 222223466666655 568899999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+.||+|--.+++.+ .+.+..+..+|.+||-||-+|| ++||++||+|.+||+++.+|++||+|||+++.--
T Consensus 429 MEyvnGGDLMyhiQQ~G----kFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVG----KFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred EEEecCchhhhHHHHhc----ccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeecccccccc
Confidence 99999999988888765 4677789999999999999999 9999999999999999999999999999997532
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
- +......++|||.|+|||++...+|+.++|+||+||++|||+.|++||+.+.++ .+.+.+.....
T Consensus 502 ~-~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~--------elF~aI~ehnv----- 567 (683)
T KOG0696|consen 502 F-DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--------ELFQAIMEHNV----- 567 (683)
T ss_pred c-CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHHccC-----
Confidence 2 233345689999999999999999999999999999999999999999765333 22333332211
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCC
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRP 944 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 944 (959)
.++.....+.+++....+.+.|.+|.
T Consensus 568 -----syPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 568 -----SYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred -----cCcccccHHHHHHHHHHhhcCCcccc
Confidence 22344556677788888999999996
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.9e-32 Score=298.03 Aligned_cols=264 Identities=25% Similarity=0.325 Sum_probs=195.5
Q ss_pred HHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceec-CCce
Q 002155 675 LEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSF-DEEK 750 (959)
Q Consensus 675 ~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~ 750 (959)
...+++|++.++||+|+||.||+|... +++.||+|++... .....+.+..|++++++++|||++++++++.. ....
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 446789999999999999999999865 7899999987542 22234567789999999999999999998865 5678
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+ +++|.++++.. .+++..+..++.|+++|++||| +.+++||||+|+||++++++.++|+|||.+.
T Consensus 86 ~lv~e~~-~~~L~~~~~~~-----~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 86 YFVTELL-GTDLHRLLTSR-----PLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred EEEeehh-ccCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 9999998 56898888643 3677888899999999999999 8999999999999999999999999999987
Q ss_pred ccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCC--------chHHHHHH
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGG--------NLVGWVFQ 901 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~--------~~~~~~~~ 901 (959)
.... ......++..|+|||.+.+ ..++.++||||+|+++||+++|+.||.......... ...++. +
T Consensus 157 ~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~ 231 (328)
T cd07856 157 IQDP----QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVI-N 231 (328)
T ss_pred ccCC----CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH-H
Confidence 5432 1123457889999998765 568999999999999999999999985432100000 000000 0
Q ss_pred HhhcCcccccc------CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 902 KMKKGQAADVL------DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 902 ~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........... .+.............+.+++.+|++.+|++||++++++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 232 TICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000000 0000000011234578899999999999999999999875
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.9e-32 Score=298.82 Aligned_cols=258 Identities=26% Similarity=0.322 Sum_probs=192.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCC------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE------ 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 748 (959)
.++|...+.||+|+||.||+|++. +|+.||+|++.... ......+.+|+++++.++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478999999999999999999865 68999999986432 222345778999999999999999999886542
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..++||||+.. ++..+.. ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||+
T Consensus 94 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG------HPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred eEEEEeccccc-CHHHHHc------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 45899999964 7766542 24788999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhc--
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK-- 905 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-- 905 (959)
++.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ...+...+..
T Consensus 164 ~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~-------~~~~~~~~~~~~ 232 (342)
T cd07879 164 ARHADA----EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-------LDQLTQILKVTG 232 (342)
T ss_pred CcCCCC----CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHHhcC
Confidence 875432 1223467889999998766 4688999999999999999999999964321 1111110000
Q ss_pred ------------CccccccC--ccccCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhh
Q 002155 906 ------------GQAADVLD--PTVLTA----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF--LKEI 956 (959)
Q Consensus 906 ------------~~~~~~~~--~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~--L~~l 956 (959)
........ +..... ........+.+++.+||+.||++||++++++++ ++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~ 303 (342)
T cd07879 233 VPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303 (342)
T ss_pred CCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence 00000000 000000 001123457899999999999999999999965 5544
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.7e-32 Score=298.73 Aligned_cols=270 Identities=26% Similarity=0.299 Sum_probs=197.2
Q ss_pred CHHHHHHHhcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceec
Q 002155 670 TLVHILEATNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSF 746 (959)
Q Consensus 670 ~~~~~~~~~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 746 (959)
...++...+++|+..+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 3456677889999999999999999999985 468899999986532 2234567789999999999999999998754
Q ss_pred C------CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc
Q 002155 747 D------EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE 820 (959)
Q Consensus 747 ~------~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 820 (959)
. ...+++++++ +++|.+++... .+++..++.++.|+++|++||| +.|++||||||+||++++++.
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~ 158 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 158 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCC
Confidence 3 3467888876 77998887643 3788999999999999999999 899999999999999999999
Q ss_pred EEEcccccccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchH---
Q 002155 821 AKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLV--- 896 (959)
Q Consensus 821 ~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~--- 896 (959)
+||+|||++..... ......++..|+|||...+ ..++.++||||+||++|||++|+.||.............
T Consensus 159 ~kl~dfg~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 234 (345)
T cd07877 159 LKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 234 (345)
T ss_pred EEEecccccccccc----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 99999999875432 2233467889999998765 467889999999999999999999985422110000000
Q ss_pred ----HHHHHHhhcCccccc-----cCccc-cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 897 ----GWVFQKMKKGQAADV-----LDPTV-LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 897 ----~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......+........ ..+.. ...........+.+++.+|++.||++||++.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 235 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000000000000000 00000 000000123467899999999999999999999864
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.8e-32 Score=292.61 Aligned_cols=260 Identities=29% Similarity=0.351 Sum_probs=197.4
Q ss_pred CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|+.+++.++|+|++++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 556788999999999999876 58999999987643 333456778999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
+ ++|.+++.... ..+++..+..++.|++.|++||| +.|++||||+|+||++++++.++|+|||.+........
T Consensus 81 ~-~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 81 D-MDLKKYLDKRP---GPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred C-cCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 7 58999998753 35889999999999999999999 88999999999999999999999999999976543221
Q ss_pred cccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc--------
Q 002155 838 HVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA-------- 908 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 908 (959)
......++..|+|||.+.+. .++.++||||+|+++||+++|++||...... .....+.+.......
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07829 154 -TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI----DQLFKIFQILGTPTEESWPGVTK 228 (282)
T ss_pred -ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHHHHhCCCcHHHHHhhcc
Confidence 12233457789999987766 7899999999999999999999998653211 011111111000000
Q ss_pred ---ccccCccccC----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ---ADVLDPTVLT----ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ---~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
....-+.... .........+.+++.+||+.||++||++++++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 229 LPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 0000000000 0011124568999999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.6e-32 Score=245.55 Aligned_cols=262 Identities=26% Similarity=0.327 Sum_probs=194.7
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+|...++||+|.||+||+|+.+ +++.||+|.++-++ ........+|+-+++.++|.|||+++++...+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 4566788999999999999865 57899999887543 33345678999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
|.. +|..|.....+ .++.+.+..++.|+++|+.|+| ++++.|||+||.|.+++.+|+.|++|||+++.++-.-
T Consensus 83 cdq-dlkkyfdslng---~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLNG---DLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred hhH-HHHHHHHhcCC---cCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 955 89999887664 4777889999999999999999 8999999999999999999999999999998876433
Q ss_pred ccccccccccccccCCCcCCCCC-CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGR-STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
... ...+-|.+|++|.++.+.+ |++..|+||.||++.|+.....|..+..+- .+....+...........+....
T Consensus 156 rcy-saevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dv---ddqlkrif~~lg~p~ed~wps~t 231 (292)
T KOG0662|consen 156 RCY-SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV---DDQLKRIFRLLGTPTEDQWPSMT 231 (292)
T ss_pred Eee-eceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcH---HHHHHHHHHHhCCCccccCCccc
Confidence 222 2335689999999888765 789999999999999999855554332111 11112222222221111111111
Q ss_pred ccC------CC-----CHH----HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLT------AD-----SKP----MMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~------~~-----~~~----~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
-.+ .. ..+ ....=.+++++.+.-+|.+|.++++.+++
T Consensus 232 ~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 232 KLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred cCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 011 00 111 11223567777888899999999998864
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-32 Score=293.18 Aligned_cols=240 Identities=22% Similarity=0.256 Sum_probs=194.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 755 (959)
++.|+....+|.|+|+.|-.+... +++..+||.+.+... +-.+|+.++... +|||++++.+.+.++.+.|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccccc----ccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 567888888999999999998764 688999999976522 233566555555 79999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE-CCCCcEEEccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL-NEEFEAKVADFGLARLISA 834 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill-~~~~~~kl~Dfg~~~~~~~ 834 (959)
++.|+-+.+.+.... .....+..|+.+|+.|+.||| +.|+||||+||+|||+ ++.++++|+|||.++....
T Consensus 397 ~l~g~ell~ri~~~~-----~~~~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKP-----EFCSEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred hccccHHHHHHHhcc-----hhHHHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 999998888776644 222678889999999999999 8999999999999999 6889999999999987654
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. ...-+-|..|.|||+.....|+.++||||+|+++|+|++|+.||.....+ ..+...+..+...
T Consensus 469 ~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s----- 532 (612)
T KOG0603|consen 469 S----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFS----- 532 (612)
T ss_pred h----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCccc-----
Confidence 3 22335688999999999999999999999999999999999999765444 1233333332211
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........+++.+|++.||.+||+|.++..+
T Consensus 533 -------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 533 -------ECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred -------cccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 2233456788999999999999999998764
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-32 Score=299.16 Aligned_cols=259 Identities=26% Similarity=0.338 Sum_probs=194.9
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCc----
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE---- 749 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---- 749 (959)
..++|++.+.||+|+||.||+|+.. +++.||+|++... .......+.+|+.++++++|||++++++++..++.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4678999999999999999999875 5789999988643 22234557789999999999999999998866554
Q ss_pred --eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccc
Q 002155 750 --KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFG 827 (959)
Q Consensus 750 --~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 827 (959)
.++|+||+ +++|.+++... .+++..++.++.|+++|++||| +.|++||||||+||++++++.++|+|||
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ-----KLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999998 56999988752 4889999999999999999999 8899999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhc-
Q 002155 828 LARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK- 905 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~- 905 (959)
.+...... .....++..|+|||.+.+ ..++.++||||+|+++||+++|+.||...... .....+......
T Consensus 164 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~----~~~~~i~~~~~~~ 235 (343)
T cd07851 164 LARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI----DQLKRIMNLVGTP 235 (343)
T ss_pred cccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHhcCCC
Confidence 99765321 233467889999998754 36789999999999999999999998543211 000100000000
Q ss_pred ----------CccccccC--cccc----CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 906 ----------GQAADVLD--PTVL----TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 906 ----------~~~~~~~~--~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........ +... ..........+.+++.+|++.||++|||+.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 236 DEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred CHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 00000000 0000 00001124578899999999999999999999763
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=296.83 Aligned_cols=262 Identities=26% Similarity=0.320 Sum_probs=193.5
Q ss_pred HHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCC----
Q 002155 676 EATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE---- 748 (959)
Q Consensus 676 ~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 748 (959)
...++|++.+.||+|+||.||+|... +++.||||++.... ......+.+|+.++++++||||+++++++..+.
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 35678999999999999999999854 68999999885432 223346778999999999999999999886543
Q ss_pred --ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 749 --EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 749 --~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
..++||||+ ++++.+++... .+++..+..++.|+++|++||| +.||+||||||+||+++.++.++++||
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~-----~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~df 162 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHE-----KLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDF 162 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeec
Confidence 358999999 77998888642 4789999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccC--------CchHH
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG--------GNLVG 897 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~--------~~~~~ 897 (959)
|++..... ......+++.|+|||.+.+ ..++.++|+||+|+++|++++|..||......... .....
T Consensus 163 g~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 238 (343)
T cd07880 163 GLARQTDS----EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKE 238 (343)
T ss_pred cccccccc----CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 99976532 1223457889999998765 45789999999999999999999998643211000 00000
Q ss_pred HHHHHhhcCccccccC--ccccC----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 898 WVFQKMKKGQAADVLD--PTVLT----ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 898 ~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
+ ...+.......... +.... .........+.+++.+|++.||++|||+.++++
T Consensus 239 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 239 F-VQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred H-HHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 00000000000000 00000 001123345789999999999999999999984
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-32 Score=287.10 Aligned_cols=244 Identities=23% Similarity=0.374 Sum_probs=194.0
Q ss_pred CCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCC
Q 002155 684 TNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNG 760 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 760 (959)
.+++|+|.||+||-|+.+ +|+.||||++.+.. +....+++.|+.++++++||.||.+-..|...+..++|||.+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 578999999999999864 79999999997542 334467899999999999999999999999999999999999765
Q ss_pred CHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC---CcEEEcccccccccccccc
Q 002155 761 SLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE---FEAKVADFGLARLISACET 837 (959)
Q Consensus 761 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~~~~~~~~ 837 (959)
.|+..+.... ..+++.....++.||+.||.||| .++|||+|+||+|||+.+. .++||||||+|+..+. .
T Consensus 649 MLEMILSsEk---gRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE--k 720 (888)
T KOG4236|consen 649 MLEMILSSEK---GRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE--K 720 (888)
T ss_pred HHHHHHHhhc---ccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecch--h
Confidence 5555555544 35788888889999999999999 8999999999999999543 5899999999998874 3
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......+|||.|.|||++..+.|.+.-|+||.|||+|--++|..||..+ .++. +++.... .+-|+
T Consensus 721 sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd------EdIn----dQIQNAa---FMyPp-- 785 (888)
T KOG4236|consen 721 SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED------EDIN----DQIQNAA---FMYPP-- 785 (888)
T ss_pred hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc------cchh----HHhhccc---cccCC--
Confidence 3445678999999999999999999999999999999999999999642 2222 2222221 11121
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
..+.+.....+++|...++..=++|-|....+.
T Consensus 786 -~PW~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 786 -NPWSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred -CchhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 223444555677777778778888888776544
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-32 Score=267.38 Aligned_cols=249 Identities=22% Similarity=0.331 Sum_probs=203.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 752 (959)
..+|+..++||+|+|++|-.++++ +.+.||+|+++++ +.++..-...|-.+..+. +||.+|-++.+|..+...++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 367999999999999999999875 5788999998764 233344456777777666 79999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
|.||++||+|--.++... .++++.+..+...|+-||.||| ++||++||+|.+|||+|..|++|++|+|+++.-
T Consensus 329 vieyv~ggdlmfhmqrqr----klpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEecCcceeeehhhhh----cCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcC
Confidence 999999999977776543 5889999999999999999999 999999999999999999999999999999764
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
-. .......++|||.|.|||++.+..|.+.+|+|++||+++||+.|+.||+....+..+.+..++..+.+.+.+..-
T Consensus 402 l~-~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiri-- 478 (593)
T KOG0695|consen 402 LG-PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRI-- 478 (593)
T ss_pred CC-CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccc--
Confidence 32 223445689999999999999999999999999999999999999999876666566666677666665543221
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCC
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP 944 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 944 (959)
| +....+...+++.-+++||.+|.
T Consensus 479 -p-------rslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 479 -P-------RSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred -c-------ceeehhhHHHHHHhhcCCcHHhc
Confidence 1 11222344566678899999986
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-32 Score=288.09 Aligned_cols=205 Identities=26% Similarity=0.319 Sum_probs=174.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.-|.+++.||-|+||+|.+++.. +...||.|.+++.+ .........|-.+|..-+.+.||++|..|.+++..|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 45888899999999999999754 45679999998754 233445678999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc-
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS- 833 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~- 833 (959)
+|++||++-.++...+ .+.+..+..++.++.+|+++.| ..|+|||||||+|||||.+|++||+|||+|+-+.
T Consensus 709 dYIPGGDmMSLLIrmg----IFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRW 781 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMG----IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 781 (1034)
T ss_pred eccCCccHHHHHHHhc----cCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeecccccccee
Confidence 9999999999887765 5788889999999999999999 8999999999999999999999999999985331
Q ss_pred -c------ccc---------------------------------cccccccccccccCCCcCCCCCCCCcCcchhHHHHH
Q 002155 834 -A------CET---------------------------------HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVIL 873 (959)
Q Consensus 834 -~------~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il 873 (959)
. ... ......+||+.|+|||++....|+..+|+||.|||+
T Consensus 782 THdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil 861 (1034)
T KOG0608|consen 782 THDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVIL 861 (1034)
T ss_pred ccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHH
Confidence 0 000 001124699999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCccc
Q 002155 874 LELVTGKEPTGPEFKDI 890 (959)
Q Consensus 874 ~elltg~~p~~~~~~~~ 890 (959)
|||+.|++||-...+..
T Consensus 862 ~em~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 862 YEMLVGQPPFLADTPGE 878 (1034)
T ss_pred HHHhhCCCCccCCCCCc
Confidence 99999999997665543
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=277.34 Aligned_cols=239 Identities=27% Similarity=0.343 Sum_probs=192.3
Q ss_pred eccCCCeEEEEEEcC-CCCEEEEEEccccch---hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCH
Q 002155 687 IGDGGFGTVYKAALP-DGKTVAVKKLSQAKT---QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 687 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
||+|+||.||+|... +++.||+|.+..... .....+..|+.++++++|||++++++++..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999875 588999999865432 2345688899999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccccc
Q 002155 763 DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD 842 (959)
Q Consensus 763 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 842 (959)
.+++.... .+++..+..++.|++.|+.|+| +.+++|+||+|+||+++.++.++|+|||.+....... .....
T Consensus 81 ~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~ 152 (250)
T cd05123 81 FSHLSKEG----RFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNT 152 (250)
T ss_pred HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccC
Confidence 99997653 4788999999999999999999 8999999999999999999999999999997654322 12234
Q ss_pred ccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCH
Q 002155 843 IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSK 922 (959)
Q Consensus 843 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (959)
..++..|+|||...+...+.++|+||||+++||+++|..||..... . .....+.... .. .+.
T Consensus 153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-------~-~~~~~~~~~~------~~----~~~ 214 (250)
T cd05123 153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-------K-EIYEKILKDP------LR----FPE 214 (250)
T ss_pred CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-------H-HHHHHHhcCC------CC----CCC
Confidence 4678899999999888889999999999999999999999854321 1 1111221110 00 111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCH---HHHHH
Q 002155 923 PMMLKMLRIAGDCLSDNPAMRPTM---LHVLK 951 (959)
Q Consensus 923 ~~~~~l~~li~~cl~~dP~~Rps~---~ell~ 951 (959)
.....+.+++.+||..||++||++ ++++.
T Consensus 215 ~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~ 246 (250)
T cd05123 215 FLSPEARDLISGLLQKDPTKRLGSGGAEEIKA 246 (250)
T ss_pred CCCHHHHHHHHHHhcCCHhhCCCcccHHHHHh
Confidence 113467889999999999999999 55543
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-33 Score=267.67 Aligned_cols=267 Identities=27% Similarity=0.361 Sum_probs=194.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecC--------
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD-------- 747 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-------- 747 (959)
..|+...+||+|.||+||+|+.+ +|+.||+|++-.+ +........+|+.++..++|+|++.++.+|...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 45666778999999999999865 5788999876442 233344567899999999999999999988532
Q ss_pred CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccc
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFG 827 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 827 (959)
...|+||++|+. +|...+.... ..++..++.++++++..||.|+| ...|+|||+||.|||++.+|.+||+|||
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~---vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFG 169 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRK---VRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFG 169 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCcc---ccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeeccc
Confidence 347999999987 8988887654 46788999999999999999999 8899999999999999999999999999
Q ss_pred cccccccccccc---cccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccC-------CchH
Q 002155 828 LARLISACETHV---STDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG-------GNLV 896 (959)
Q Consensus 828 ~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~-------~~~~ 896 (959)
+++.+....... .+..+-|.+|++||.+.+ ..|+++.|||+.||++.||+||.+-++...+...- +++.
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 998775433322 234567999999997665 56899999999999999999999887653321100 0000
Q ss_pred HHHHHHhhcCccccccCccccCCC----CHHHHH------HHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 897 GWVFQKMKKGQAADVLDPTVLTAD----SKPMML------KMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~------~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..++..+..-+....+.....+.. .++... .-.+++.+++..||.+|+++.+++.+
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 011111111111111100001100 011111 45678888999999999999998865
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=293.27 Aligned_cols=261 Identities=25% Similarity=0.280 Sum_probs=189.1
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-C--CCEEEEEEccccc--hhhHHHHHHHHHHHhcC-CCCceeccccceec----CCc
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-D--GKTVAVKKLSQAK--TQGHREFTAEMETLGKV-KHQNLVPLLGYCSF----DEE 749 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~----~~~ 749 (959)
+|++.+.||+|+||.||+|+.. + +..||+|++.... ......+.+|+++++++ +||||+++++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778889999999999999875 3 7789999886432 22245677899999999 59999999986532 245
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.++++||++ ++|.+++.... .+++..+..++.|++.||+||| +.|++||||||+||++++++.+||+|||.+
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ----PLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 788999886 58988886533 5788999999999999999999 899999999999999999999999999999
Q ss_pred ccccccccc---ccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHH----
Q 002155 830 RLISACETH---VSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ---- 901 (959)
Q Consensus 830 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~---- 901 (959)
......... ......|+..|+|||...+ ..++.++||||+|+++|++++|.+||...... .....+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~----~~~~~~~~~~~~ 228 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV----DQLNQILQVLGT 228 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH----HHHHHHHHHhCC
Confidence 765432111 1223468899999998665 46899999999999999999999998643210 00000000
Q ss_pred -------HhhcCcccc------ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 902 -------KMKKGQAAD------VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 902 -------~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+....... .................+.+++.+|++.||++|||+.+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 229 PDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred CCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000000 000000000001123467899999999999999999998753
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-31 Score=275.82 Aligned_cols=219 Identities=22% Similarity=0.199 Sum_probs=174.9
Q ss_pred CCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCHHHHHhh
Q 002155 690 GGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRN 768 (959)
Q Consensus 690 G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 768 (959)
|.||.||+|+++ +++.||+|++.... .+..|...+....|||++++++++...+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999875 68899999987543 223455555566799999999999999999999999999999999876
Q ss_pred hcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccccccccccc
Q 002155 769 RTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFG 848 (959)
Q Consensus 769 ~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~ 848 (959)
.. .+++..+..++.|+++|++|+| +.|++||||||+||+++.++.++++|||.+...... .....++..
T Consensus 79 ~~----~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~ 147 (237)
T cd05576 79 FL----NIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENM 147 (237)
T ss_pred hc----CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCcc
Confidence 43 4788999999999999999999 899999999999999999999999999988655321 122345678
Q ss_pred ccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHH
Q 002155 849 YIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKM 928 (959)
Q Consensus 849 y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 928 (959)
|+|||...+..++.++||||+|+++|||++|..|+....... ... . ... .+......+
T Consensus 148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-------------~~~--~---~~~----~~~~~~~~~ 205 (237)
T cd05576 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-------------NTH--T---TLN----IPEWVSEEA 205 (237)
T ss_pred ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-------------ccc--c---ccC----CcccCCHHH
Confidence 999999988889999999999999999999998864321110 000 0 000 011123467
Q ss_pred HHHHHHcccCCCCCCCCH
Q 002155 929 LRIAGDCLSDNPAMRPTM 946 (959)
Q Consensus 929 ~~li~~cl~~dP~~Rps~ 946 (959)
.+++.+|++.||++||++
T Consensus 206 ~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 206 RSLLQQLLQFNPTERLGA 223 (237)
T ss_pred HHHHHHHccCCHHHhcCC
Confidence 889999999999999997
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-31 Score=314.41 Aligned_cols=145 Identities=30% Similarity=0.410 Sum_probs=130.1
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.++||+|+||.||+|.+. +++.||+|++.... ......+..|+.+++.++||||+++++++...+..|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888999999999999999976 68899999986532 223456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
||+.+++|.++++... .+++..++.++.||+.||+||| ..+|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~----~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYG----YFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999997643 4788899999999999999999 7899999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-32 Score=275.01 Aligned_cols=262 Identities=23% Similarity=0.323 Sum_probs=199.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCC--C----ceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKH--Q----NLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~----niv~~~~~~~~~~~~ 750 (959)
+++|.+...+|+|.||.|-.+.+. .+..||||+++..... .+...-|+++++++.+ | -+|.+.++|...++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY-reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY-REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH-hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 688999999999999999999765 4789999998754332 4455679999999942 3 378888999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-------------
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE------------- 817 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~------------- 817 (959)
|+|+|.+ |-++.+++.... ..+++...+..|+.|++++++||| +.+++|-|+||+||++.+
T Consensus 167 Civfell-G~S~~dFlk~N~--y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~~ 240 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENN--YIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKKV 240 (415)
T ss_pred EEEEecc-ChhHHHHhccCC--ccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCcc
Confidence 9999987 669999998754 567899999999999999999999 899999999999999931
Q ss_pred -------CCcEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc
Q 002155 818 -------EFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI 890 (959)
Q Consensus 818 -------~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~ 890 (959)
...|+++|||.|+.... .....+.|..|+|||++.+-+++.++||||+|||++|++||..-|+... +.
T Consensus 241 ~~~r~~ks~~I~vIDFGsAtf~~e----~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe-n~ 315 (415)
T KOG0671|consen 241 CFIRPLKSTAIKVIDFGSATFDHE----HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE-NL 315 (415)
T ss_pred ceeccCCCcceEEEecCCcceecc----CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCC-cH
Confidence 23589999999986432 2245678999999999999999999999999999999999999887532 11
Q ss_pred cCCchHHHHHHHh--------------hcCccccc------------cCccc----cCCCCHHHHHHHHHHHHHcccCCC
Q 002155 891 EGGNLVGWVFQKM--------------KKGQAADV------------LDPTV----LTADSKPMMLKMLRIAGDCLSDNP 940 (959)
Q Consensus 891 ~~~~~~~~~~~~~--------------~~~~~~~~------------~~~~~----~~~~~~~~~~~l~~li~~cl~~dP 940 (959)
+--.+++.+.+.+ ..+ .-++ .++.. .-.........+++|++.|+..||
T Consensus 316 EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~-rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP 394 (415)
T KOG0671|consen 316 EHLAMMERILGPIPSRMIKKTRKEKYFRRG-RLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDP 394 (415)
T ss_pred HHHHHHHHhhCCCcHHHhhhhhhHhhhhcc-cccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCc
Confidence 1112222221110 000 0000 00000 011233466679999999999999
Q ss_pred CCCCCHHHHHHH
Q 002155 941 AMRPTMLHVLKF 952 (959)
Q Consensus 941 ~~Rps~~ell~~ 952 (959)
.+|+|+.|++.+
T Consensus 395 ~~RiTl~EAL~H 406 (415)
T KOG0671|consen 395 ARRITLREALSH 406 (415)
T ss_pred cccccHHHHhcC
Confidence 999999999864
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-31 Score=246.71 Aligned_cols=201 Identities=26% Similarity=0.362 Sum_probs=166.5
Q ss_pred CCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHh-cCCCCceeccccceecCCceEEEEEeccC
Q 002155 683 KTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLG-KVKHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
....||+|+||.|-+-++. +|...|||.+.... .+..++...|+.+.. ...+|.+|++||.+......|+.||.|.-
T Consensus 50 ~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t 129 (282)
T KOG0984|consen 50 GIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT 129 (282)
T ss_pred hhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh
Confidence 4567999999999888754 79999999987542 344556667776544 44799999999999999999999999954
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
+|+.|.++.-.....+++...-+||..|++|+.|||+ ...++|||+||+|||++.+|+||+||||.+..+..+ -.
T Consensus 130 -Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS--iA 204 (282)
T KOG0984|consen 130 -SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS--IA 204 (282)
T ss_pred -hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehhh--hH
Confidence 8988887766666778999999999999999999997 678999999999999999999999999999876432 12
Q ss_pred cccccccccccCCCcCCC----CCCCCcCcchhHHHHHHHHHhCCCCCCCCCc
Q 002155 840 STDIAGTFGYIPPEYGQS----GRSTTRGDVYSFGVILLELVTGKEPTGPEFK 888 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~il~elltg~~p~~~~~~ 888 (959)
.+-..|...|||||.+.. ..|+.++||||+|+.+.||.+++.||.....
T Consensus 205 kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 205 KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 222468889999997543 4789999999999999999999999876543
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=279.08 Aligned_cols=248 Identities=22% Similarity=0.297 Sum_probs=199.4
Q ss_pred CCCCCCeeccCCCeEEEEEEcCCCC-EEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALPDGK-TVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~~~~-~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
+++....||-|+||.|-.++.+... .+|+|.+++. ++...+.+..|-.+|...+.|.||++|..|.+..+.|+.||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 3445667999999999999876433 4888887653 34445567789999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
-|-||.+...+++++ .++..++..++..+.+|++||| ++|||+||+||+|.+++.+|-+||.|||+|+.....
T Consensus 501 aClGGElWTiLrdRg----~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 501 ACLGGELWTILRDRG----SFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred hhcCchhhhhhhhcC----CcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 999999999999876 5788889999999999999999 899999999999999999999999999999988643
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
...-.++|||.|.|||++..+..+.++|.||+|+++||+++|.+||....+- .....+...+.. .+
T Consensus 574 --~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm----ktYn~ILkGid~---i~----- 639 (732)
T KOG0614|consen 574 --RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM----KTYNLILKGIDK---IE----- 639 (732)
T ss_pred --CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH----HHHHHHHhhhhh---hh-----
Confidence 3344689999999999999999999999999999999999999999753221 111111111111 11
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPT-----MLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~ell~~ 952 (959)
.++.....-.++|++....+|.+|.. +.+|.++
T Consensus 640 ----~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 640 ----FPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred ----cccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 12333345567788888899999985 5666554
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=299.72 Aligned_cols=263 Identities=19% Similarity=0.194 Sum_probs=170.4
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-C----CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccc------ee
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-D----GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGY------CS 745 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~------~~ 745 (959)
..++|+..+.||+|+||.||+|++. + +..||||++...... +....| .++...+.+++.++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4578999999999999999999875 4 689999987643221 111111 1122222333332222 23
Q ss_pred cCCceEEEEEeccCCCHHHHHhhhcCC----------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCC
Q 002155 746 FDEEKLLVYEYMVNGSLDLWLRNRTGS----------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIK 809 (959)
Q Consensus 746 ~~~~~~lv~e~~~~g~L~~~l~~~~~~----------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk 809 (959)
.+...++||||+++++|.+++...... ........+..++.|++.||+||| +.+|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCC
Confidence 556789999999999999998754210 001123345679999999999999 8899999999
Q ss_pred CCCEEECC-CCcEEEcccccccccccccccccccccccccccCCCcCCCC----------------------CCCCcCcc
Q 002155 810 ASNILLNE-EFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG----------------------RSTTRGDV 866 (959)
Q Consensus 810 ~~Nill~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~Dv 866 (959)
|+|||++. ++.+||+|||+++..............+++.|+|||.+... .++.++||
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV 362 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI 362 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence 99999986 57999999999986644334444556789999999954322 23456799
Q ss_pred hhHHHHHHHHHhCCCCCCCCCcc------ccCCchHHHHHHHhhcCccccccCccccC--CCCHHHHHHHHHHHHHcccC
Q 002155 867 YSFGVILLELVTGKEPTGPEFKD------IEGGNLVGWVFQKMKKGQAADVLDPTVLT--ADSKPMMLKMLRIAGDCLSD 938 (959)
Q Consensus 867 wslG~il~elltg~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~ 938 (959)
||+||++|||+++..|+...... ..+.+...|.... ... ..+.... ...........+++.+|++.
T Consensus 363 wSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 363 YSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLV-EPR-----ASPDLRRGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred HHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhh-ccc-----cchhhhhhhhhccccchHHHHHHHHHccC
Confidence 99999999999977664321100 0001111111100 000 0000000 00000112345799999999
Q ss_pred CCCCCCCHHHHHHH
Q 002155 939 NPAMRPTMLHVLKF 952 (959)
Q Consensus 939 dP~~Rps~~ell~~ 952 (959)
||++|||++|++++
T Consensus 437 dP~kR~ta~e~L~H 450 (566)
T PLN03225 437 KGRQRISAKAALAH 450 (566)
T ss_pred CcccCCCHHHHhCC
Confidence 99999999999875
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-30 Score=288.31 Aligned_cols=263 Identities=20% Similarity=0.265 Sum_probs=179.8
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEc-----------------CCCCEEEEEEccccchhhHHHH--------------HHH
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAAL-----------------PDGKTVAVKKLSQAKTQGHREF--------------TAE 725 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~-----------------~~~~~vavK~~~~~~~~~~~~~--------------~~e 725 (959)
..++|++.++||+|+||.||+|.+ .+++.||||++........++| ..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999963 2356899999865433222222 346
Q ss_pred HHHHhcCCCCce-----eccccceec--------CCceEEEEEeccCCCHHHHHhhhcCC--------------------
Q 002155 726 METLGKVKHQNL-----VPLLGYCSF--------DEEKLLVYEYMVNGSLDLWLRNRTGS-------------------- 772 (959)
Q Consensus 726 ~~~l~~l~h~ni-----v~~~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~~-------------------- 772 (959)
+.++.+++|.++ ++++++|.. ++..++||||+++++|.++++...+.
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 667777766544 677777743 35689999999999999998753211
Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccccccccccccccCC
Q 002155 773 LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852 (959)
Q Consensus 773 ~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aP 852 (959)
...+++..+..++.|++.|++|+| +.+|+||||||+||+++.++.+||+|||++...............+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 123467788999999999999999 88999999999999999999999999999976543222111222357899999
Q ss_pred CcCCCCC--------------------C--CCcCcchhHHHHHHHHHhCCC-CCCCCCc--c-c--cCCchHHHHHHHhh
Q 002155 853 EYGQSGR--------------------S--TTRGDVYSFGVILLELVTGKE-PTGPEFK--D-I--EGGNLVGWVFQKMK 904 (959)
Q Consensus 853 E~~~~~~--------------------~--~~~~DvwslG~il~elltg~~-p~~~~~~--~-~--~~~~~~~~~~~~~~ 904 (959)
|.+.... + ..+.||||+||++|||++|.. ||..... . . .......|. ...
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r--~~~ 457 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWR--MYK 457 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHH--hhc
Confidence 9765332 1 234799999999999999875 5532110 0 0 001111111 111
Q ss_pred cCccccccCccccCCCCHHHHHHHHHHHHHcccCCC---CCCCCHHHHHHH
Q 002155 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNP---AMRPTMLHVLKF 952 (959)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~Rps~~ell~~ 952 (959)
... .+-. ..........+++.+++..+| .+|+|++|+++|
T Consensus 458 ~~~----~~~~----~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 458 GQK----YDFS----LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred ccC----CCcc----cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 110 0100 111223456778888998766 689999999875
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-31 Score=270.99 Aligned_cols=255 Identities=27% Similarity=0.425 Sum_probs=191.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcc--ccchhh-----HHHHHHHHHHHhcCCCCceeccccceecC-Cc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLS--QAKTQG-----HREFTAEMETLGKVKHQNLVPLLGYCSFD-EE 749 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~--~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~ 749 (959)
++|-..+.||+|+|++||+|.+- ..+.||||+-. +...++ .+...+|.++-+.++||.||++|+||.-+ +.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 45666788999999999999854 57788998643 222222 23456899999999999999999999755 56
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---CCcEEEccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE---EFEAKVADF 826 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Df 826 (959)
+|-|.|||+|.+|+-|++... .+++.++..|+.||+.||.||... +..|+|-|+||.|||+.. -|.+||+||
T Consensus 543 FCTVLEYceGNDLDFYLKQhk----lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHK----LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred ceeeeeecCCCchhHHHHhhh----hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeec
Confidence 789999999999999998765 588999999999999999999965 789999999999999954 489999999
Q ss_pred cccccccccccc------ccccccccccccCCCcCCCC----CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchH
Q 002155 827 GLARLISACETH------VSTDIAGTFGYIPPEYGQSG----RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLV 896 (959)
Q Consensus 827 g~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~ 896 (959)
|+++.+...... .....+||.+|.+||.+--+ +.+.++||||+|||+|.++.|+.||+..... .++.
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ---QdIL 694 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ---QDIL 694 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH---HHHH
Confidence 999987643222 23356799999999954322 4688999999999999999999999764322 1111
Q ss_pred HHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 002155 897 GWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVL 950 (959)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell 950 (959)
.+- ..+.. .++-.| ..+.......++|++|+...-++|.+..++.
T Consensus 695 qeN-TIlkA---tEVqFP-----~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 695 QEN-TILKA---TEVQFP-----PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred hhh-chhcc---eeccCC-----CCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 100 00111 111111 1112233456788899999999998887764
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-29 Score=262.50 Aligned_cols=238 Identities=33% Similarity=0.412 Sum_probs=192.6
Q ss_pred CCeEEEEEEcC-CCCEEEEEEccccchhh-HHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCHHHHHhh
Q 002155 691 GFGTVYKAALP-DGKTVAVKKLSQAKTQG-HREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRN 768 (959)
Q Consensus 691 ~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 768 (959)
+||.||+|+.. +++.+|+|++....... .+.+.+|++.+++++|++++++++++..+...++||||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999986 48999999987654433 67889999999999999999999999998999999999999999999876
Q ss_pred hcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccccccccccc
Q 002155 769 RTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFG 848 (959)
Q Consensus 769 ~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~ 848 (959)
.. .+++..++.++.+++.++.||| +.+++|+||+|+||++++++.++++|||.+....... ......++..
T Consensus 81 ~~----~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~ 151 (244)
T smart00220 81 RG----RLSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPE 151 (244)
T ss_pred cc----CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcC
Confidence 44 2788999999999999999999 8899999999999999999999999999998765332 2234567889
Q ss_pred ccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHH
Q 002155 849 YIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKM 928 (959)
Q Consensus 849 y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 928 (959)
|+|||...+..++.++||||+|+++|++++|..||...... ....+......... ..........+
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~-------~~~~~~~~~~~~~~-------~~~~~~~~~~~ 217 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL-------LELFKKIGKPKPPF-------PPPEWKISPEA 217 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH-------HHHHHHHhccCCCC-------ccccccCCHHH
Confidence 99999988888899999999999999999999998542111 11122222111110 00000034578
Q ss_pred HHHHHHcccCCCCCCCCHHHHHH
Q 002155 929 LRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 929 ~~li~~cl~~dP~~Rps~~ell~ 951 (959)
.+++.+|+..+|++||++.++++
T Consensus 218 ~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 218 KDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHccCCchhccCHHHHhh
Confidence 88999999999999999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-30 Score=289.00 Aligned_cols=247 Identities=25% Similarity=0.391 Sum_probs=187.8
Q ss_pred CCCCCeeccCCCeE-EEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEEecc
Q 002155 681 FCKTNIIGDGGFGT-VYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 681 f~~~~~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
|...+++|.|+-|+ ||+|.. +|+.||||++-.. ...-..+|+..++.- +|||||++++.-.++...|++.|.|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 44456799999986 899998 5899999988643 233456899999988 59999999888888889999999996
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---C--CcEEEcccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE---E--FEAKVADFGLARLIS 833 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~--~~~kl~Dfg~~~~~~ 833 (959)
. +|.+++...............+.+..|+++|++||| +.+|||||+||.||||+. + .+++|+|||+++...
T Consensus 587 ~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 587 C-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred h-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 5 999999874211111111345788999999999999 899999999999999965 3 579999999999886
Q ss_pred cccccc--cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhC-CCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 834 ACETHV--STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTG-KEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 834 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
...... .....||.+|+|||.+....-+.++||||+||++|+.++| .+||+.....+. ..+.....-.
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~---------NIl~~~~~L~ 733 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA---------NILTGNYTLV 733 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh---------hhhcCcccee
Confidence 543322 2345799999999999998889999999999999999995 899986533210 0111111111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+. + ..++ ...++|.+|++++|..||+|.+|+.+
T Consensus 734 ~L~-----~-~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 734 HLE-----P-LPDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred eec-----c-CchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 111 1 1122 55689999999999999999999854
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-30 Score=252.61 Aligned_cols=263 Identities=25% Similarity=0.307 Sum_probs=192.4
Q ss_pred CCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecC-----CceEEEE
Q 002155 683 KTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD-----EEKLLVY 754 (959)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~ 754 (959)
..+.||-|+||+||.+++. +|+.||.|++...- -...+.+.+|++++..++|.|+...+++.... .+.|+++
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 4678999999999999875 79999999986432 23456788999999999999999988876543 3567888
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
|.+.. +|...+-.. +.++.+.+.-+..||++||+||| +.+|.||||||.|.|++.+-.+||||||+++....
T Consensus 137 ELmQS-DLHKIIVSP----Q~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 137 ELMQS-DLHKIIVSP----QALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHh-hhhheeccC----CCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccch
Confidence 88854 777766543 46777888889999999999999 89999999999999999999999999999987765
Q ss_pred ccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCcccc-----------CCchHHHH---
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIE-----------GGNLVGWV--- 899 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~-----------~~~~~~~~--- 899 (959)
++..-++..+-|.+|+|||++.+. .|+.+.||||.||++.|++.++--|+...+-.. ..+.+...
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEG 288 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEG 288 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhh
Confidence 555555556778999999987765 589999999999999999999988865433111 01111111
Q ss_pred -HHHhhcCccccccCccccC-CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002155 900 -FQKMKKGQAADVLDPTVLT-ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953 (959)
Q Consensus 900 -~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 953 (959)
+..+-++.....-.+.... ....+.-..-+.+.++++..||++|.+.++.+.+.
T Consensus 289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 1111111111100011100 01112233445677889999999999999887654
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.8e-30 Score=275.11 Aligned_cols=253 Identities=26% Similarity=0.355 Sum_probs=204.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|+...++|.|.||.||||+++ .++..|||+++.+...+..-+.+|+-+++..+|||||.+++.|...+..|++|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 467888999999999999999976 6899999999887777777788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
|.+|+|.+.-+-.. ++++.++..+.+...+|++|+| +.|-+|||||..||++++.|.||++|||.+..++. .
T Consensus 94 cgggslQdiy~~Tg----plselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqita-t 165 (829)
T KOG0576|consen 94 CGGGSLQDIYHVTG----PLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA-T 165 (829)
T ss_pred cCCCcccceeeecc----cchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhh-h
Confidence 99999998776544 6888899999999999999999 89999999999999999999999999999987754 2
Q ss_pred ccccccccccccccCCCc---CCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 837 THVSTDIAGTFGYIPPEY---GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~---~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
-.....+.||+.|||||+ -..+.|...+|||+.|+...|+---++|...-.+- .+...+. ...++
T Consensus 166 i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm--------r~l~LmT----kS~~q 233 (829)
T KOG0576|consen 166 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM--------RALFLMT----KSGFQ 233 (829)
T ss_pred hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH--------HHHHHhh----ccCCC
Confidence 333456789999999996 34567899999999999999998888774321110 0011111 11112
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
|.- -.....+...+-++++.|+.++|.+||+++.++.
T Consensus 234 pp~-lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 234 PPT-LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CCc-ccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 211 1223345556777888899999999999998765
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9e-28 Score=251.11 Aligned_cols=133 Identities=25% Similarity=0.315 Sum_probs=110.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC-----C---Cceeccccceec--
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-----H---QNLVPLLGYCSF-- 746 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~~~~~~~~-- 746 (959)
..+|.+.++||.|.|++||.|-+. +.+.||+|+.+.+... .+....|++++++++ | .+||+++++|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhY-tEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHY-TEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHH-HHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 368889999999999999999864 5678999998765332 345668999999884 3 469999999964
Q ss_pred --CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC
Q 002155 747 --DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN 816 (959)
Q Consensus 747 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 816 (959)
+.+.|||+|+. |.+|..++....- +-++...+.+|++||+.||.|||+ ..||+|.||||+|||+.
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~Y--rGlpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNY--RGLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKPENVLLC 222 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCC--CCCcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCcceeeee
Confidence 46889999998 5689899887553 457889999999999999999998 56999999999999994
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-28 Score=233.28 Aligned_cols=259 Identities=17% Similarity=0.259 Sum_probs=190.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CCceeccccceecCC--ceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDE--EKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~--~~~lv 753 (959)
.++|++.+++|+|.|++||.|.. .+.++++||+++... .+.+.+|+.++..+. ||||++++++..+.. ...++
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 46788899999999999999974 467899999997543 356889999999997 999999999987654 55799
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC-CcEEEccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE-FEAKVADFGLARLI 832 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~~~ 832 (959)
+||+.+.+...+.. .+....+..++.++++||.|+| +.||+|||+||.||++|.. ..++|+|+|+|..+
T Consensus 114 FE~v~n~Dfk~ly~-------tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY 183 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYP-------TLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 183 (338)
T ss_pred hhhhccccHHHHhh-------hhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhc
Confidence 99999988766553 3566788899999999999999 9999999999999999865 57999999999887
Q ss_pred ccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccC----------CchHHHHHH
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG----------GNLVGWVFQ 901 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~----------~~~~~~~~~ 901 (959)
-+.... ...+.+..|.-||.+-. ..|+..-|+|||||++.+|+..+.||..+.+..+. .++.+++..
T Consensus 184 Hp~~eY--nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~K 261 (338)
T KOG0668|consen 184 HPGKEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNK 261 (338)
T ss_pred CCCcee--eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHH
Confidence 543322 33466778999997554 45788999999999999999999999654332110 111111110
Q ss_pred -----------HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 902 -----------KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 902 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+.+.....+. ..+.+....-...+.++++.+.+..|..+|+||+|.+++
T Consensus 262 Y~i~Ldp~~~~i~~~~~rk~w~-~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 262 YQIDLDPQFEDILGRHSRKPWS-RFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HccCCChhHhhHhhccccccHH-HhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 00000000000 000011111122466788889999999999999998764
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-28 Score=262.39 Aligned_cols=198 Identities=22% Similarity=0.331 Sum_probs=170.1
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcCC-CCEEEEEEccccch---hhHH-----HHHHHHHHHhcCC---CCceeccccce
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKT---QGHR-----EFTAEMETLGKVK---HQNLVPLLGYC 744 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~-----~~~~e~~~l~~l~---h~niv~~~~~~ 744 (959)
...+|...+.+|.|+||.|+.|.++. ...|+||.+.++.. .+.+ ..-.|+++|..++ |+||++++++|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 34568889999999999999999864 56789999876532 1222 2446999999997 99999999999
Q ss_pred ecCCceEEEEEecc-CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEE
Q 002155 745 SFDEEKLLVYEYMV-NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 745 ~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 823 (959)
.+++.+|++||-.. +.+|.+++.-.. .+++.++..|++||+.|+++|| +.||||||||-+||.++.+|-+||
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~kp----~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~kl 711 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFKP----RMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKL 711 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhccC----ccchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEE
Confidence 99999999999874 568999997654 5889999999999999999999 899999999999999999999999
Q ss_pred cccccccccccccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCC
Q 002155 824 ADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTG 884 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~ 884 (959)
+|||.+...... ....++||..|.|||++.+.+| +..-|||++|+++|-++....||.
T Consensus 712 idfgsaa~~ksg---pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 712 IDFGSAAYTKSG---PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eeccchhhhcCC---CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999999765432 2345789999999999999887 677899999999999999999975
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-28 Score=237.35 Aligned_cols=257 Identities=21% Similarity=0.340 Sum_probs=190.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccc-eecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGY-CSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~-~~~~~~~~lv~e 755 (959)
+.|.+.+.+|+|.||.+-.++++ +.+.+|+|.+..... ..++|.+|...--.+ .|.||+.-|++ |+..+..++++|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 45778899999999999999876 467899998875433 357788898766566 48999987764 667778889999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE-C-CCCcEEEcccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL-N-EEFEAKVADFGLARLIS 833 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill-~-~~~~~kl~Dfg~~~~~~ 833 (959)
|++.|+|..-+...+ +.+....+++.|+++|++|+| ++++||||||.+|||| + +..+||+||||..+..+
T Consensus 103 ~aP~gdL~snv~~~G-----igE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 103 FAPRGDLRSNVEAAG-----IGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred cCccchhhhhcCccc-----ccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccccC
Confidence 999999999887654 677788899999999999999 9999999999999999 3 33589999999987654
Q ss_pred cccccccccccccccccCCCcCCCC---C--CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSG---R--STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~---~--~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
..-. ....+..|.|||+.... . ..+.+|||.||+++|.++||+.||+..+.. +.....|. +...+..
T Consensus 175 ~tV~----~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~--d~~Y~~~~--~w~~rk~ 246 (378)
T KOG1345|consen 175 TTVK----YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIM--DKPYWEWE--QWLKRKN 246 (378)
T ss_pred ceeh----hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhcc--CchHHHHH--HHhcccC
Confidence 3211 12345679999964332 2 367899999999999999999999865443 22233222 2222211
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.. .+..-..+..+.+++.++-+.++|++|-...++.+.-+...+
T Consensus 247 ~~------~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~ 290 (378)
T KOG1345|consen 247 PA------LPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK 290 (378)
T ss_pred cc------CchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence 11 112223344567777888999999999877777776665544
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-28 Score=250.13 Aligned_cols=265 Identities=28% Similarity=0.367 Sum_probs=197.7
Q ss_pred HHhcCCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CCceeccccceecCCce
Q 002155 676 EATNNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 676 ~~~~~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 750 (959)
...+.|...++||+|.|++||+|.+. ..+.||+|.+...+. ...+..|++++..+. +.||+++.+++...+..
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v 110 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQV 110 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCCee
Confidence 34567889999999999999999854 367899999876443 356889999999994 89999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC-CcEEEcccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE-FEAKVADFGLA 829 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~ 829 (959)
.+|+||+++....++... ++..++..+++.+..||+++| ..|||||||||+|++.+.. ++-.|.|||+|
T Consensus 111 ~ivlp~~~H~~f~~l~~~-------l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA 180 (418)
T KOG1167|consen 111 AIVLPYFEHDRFRDLYRS-------LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLA 180 (418)
T ss_pred EEEecccCccCHHHHHhc-------CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechhH
Confidence 999999999999998875 556788899999999999999 8999999999999999765 78899999999
Q ss_pred cccccc-------------------------------------------cccccccccccccccCCCcCCCC-CCCCcCc
Q 002155 830 RLISAC-------------------------------------------ETHVSTDIAGTFGYIPPEYGQSG-RSTTRGD 865 (959)
Q Consensus 830 ~~~~~~-------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~D 865 (959)
..+... ......+.+||++|+|||++..- ..++++|
T Consensus 181 ~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiD 260 (418)
T KOG1167|consen 181 QRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAID 260 (418)
T ss_pred HHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccc
Confidence 722100 00011134699999999986654 4688999
Q ss_pred chhHHHHHHHHHhCCCCCCCCCccccCCchHHHHH--HHhh-----cCc--cc---------------ccc-----Ccc-
Q 002155 866 VYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF--QKMK-----KGQ--AA---------------DVL-----DPT- 915 (959)
Q Consensus 866 vwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~--~~~~-----~~~--~~---------------~~~-----~~~- 915 (959)
|||.|||+..+++++.||....++...-.-...+. ..++ .+. .. +.+ .+.
T Consensus 261 iws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~ 340 (418)
T KOG1167|consen 261 IWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSR 340 (418)
T ss_pred eeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccc
Confidence 99999999999999999987766543211111000 0000 000 00 000 000
Q ss_pred ---ccCCCCHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 ---VLTADSKP-MMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ---~~~~~~~~-~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.......+ .....++++.+|++.||.+|.||++.+++
T Consensus 341 q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 341 QPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred ccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 00111122 23367899999999999999999999875
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=238.82 Aligned_cols=211 Identities=36% Similarity=0.573 Sum_probs=183.0
Q ss_pred eccCCCeEEEEEEcCC-CCEEEEEEccccchh-hHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCHHH
Q 002155 687 IGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQ-GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDL 764 (959)
Q Consensus 687 lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~ 764 (959)
||+|++|.||++...+ ++.+++|++...... ....+.+|++.++.++|++++++++++......+++|||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999864 899999998765432 34678899999999999999999999998899999999999999999
Q ss_pred HHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-CCcEEEcccccccccccccccccccc
Q 002155 765 WLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE-EFEAKVADFGLARLISACETHVSTDI 843 (959)
Q Consensus 765 ~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~ 843 (959)
++.... ..+++..++.++.++++++++|| +.|++|+||+|.||+++. ++.++|+|||.+........ .....
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~ 153 (215)
T cd00180 81 LLKENE---GKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTI 153 (215)
T ss_pred HHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcc
Confidence 998653 34788999999999999999999 889999999999999999 89999999999976643221 12334
Q ss_pred cccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCH
Q 002155 844 AGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSK 922 (959)
Q Consensus 844 ~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (959)
.+...|++||..... .++.++|+|++|++++++
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------- 187 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------- 187 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------------
Confidence 578899999998777 788999999999999998
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002155 923 PMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953 (959)
Q Consensus 923 ~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 953 (959)
..+.+++.+|++.||++||++.++++++
T Consensus 188 ---~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ---PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ---HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 3577899999999999999999998753
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-27 Score=250.24 Aligned_cols=271 Identities=24% Similarity=0.243 Sum_probs=204.4
Q ss_pred cccCHHHHHHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC------CCceec
Q 002155 667 MRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK------HQNLVP 739 (959)
Q Consensus 667 ~~~~~~~~~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~ 739 (959)
.++.+.++ ...+|.+....|+|-|++|.+|.+. .|+.||||+|.....- .+.=..|+++|+++. -.|+++
T Consensus 422 Yrv~igE~--LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclr 498 (752)
T KOG0670|consen 422 YRVRIGEL--LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLR 498 (752)
T ss_pred EEEehhhh--hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHH
Confidence 34444444 4578999999999999999999875 4889999999864322 233457999999995 348999
Q ss_pred cccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC-
Q 002155 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE- 818 (959)
Q Consensus 740 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~- 818 (959)
++.+|....+.|+|+|-+. -+|.+.+...+. ..-+....+..++.|+.-||..|. ..||+|.||||.|||+++.
T Consensus 499 l~r~F~hknHLClVFE~Ls-lNLRevLKKyG~-nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k 573 (752)
T KOG0670|consen 499 LFRHFKHKNHLCLVFEPLS-LNLREVLKKYGR-NVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESK 573 (752)
T ss_pred HHHHhhhcceeEEEehhhh-chHHHHHHHhCc-ccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCc
Confidence 9999999999999999874 489999987653 344677888999999999999999 7899999999999999876
Q ss_pred CcEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHH
Q 002155 819 FEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGW 898 (959)
Q Consensus 819 ~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 898 (959)
..+||||||.|...+ ....+++.-+..|.|||++.+.+|+...|+||.||++||+.||+.-|.+..... +...
T Consensus 574 ~iLKLCDfGSA~~~~---eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~----MLrl 646 (752)
T KOG0670|consen 574 NILKLCDFGSASFAS---ENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQ----MLRL 646 (752)
T ss_pred ceeeeccCccccccc---cccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHH----HHHH
Confidence 568999999997654 233344556678999999999999999999999999999999998875432211 1100
Q ss_pred H--------HHHhhcCccc---------------------------cccCc-----------cccCCCCHHHHHHHHHHH
Q 002155 899 V--------FQKMKKGQAA---------------------------DVLDP-----------TVLTADSKPMMLKMLRIA 932 (959)
Q Consensus 899 ~--------~~~~~~~~~~---------------------------~~~~~-----------~~~~~~~~~~~~~l~~li 932 (959)
. ...++.+... ....| .-.+.........+.+|+
T Consensus 647 ~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLL 726 (752)
T KOG0670|consen 647 FMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLL 726 (752)
T ss_pred HHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHH
Confidence 0 0001111000 00111 012233455677889999
Q ss_pred HHcccCCCCCCCCHHHHHHH
Q 002155 933 GDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 933 ~~cl~~dP~~Rps~~ell~~ 952 (959)
.+|+..||++|.|..+++++
T Consensus 727 dkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 727 DKMLILDPEKRITVNQALKH 746 (752)
T ss_pred HHHhccChhhcCCHHHHhcC
Confidence 99999999999999999875
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-27 Score=234.83 Aligned_cols=194 Identities=30% Similarity=0.351 Sum_probs=162.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecC------Cc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD------EE 749 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~ 749 (959)
.+|.-.+.+|.|.- .|..|.+. .++.||+|+.... .....+...+|..++..+.|+|+++++.+|... ..
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 35556778899988 56566543 5889999987543 233455677899999999999999999998654 35
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.|+|||||.. ++...+.- .++-.+...+..|+++|+.|+| +.||+|||+||+||++..+..+||.|||+|
T Consensus 96 ~y~v~e~m~~-nl~~vi~~------elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 96 VYLVMELMDA-NLCQVILM------ELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred HHHHHHhhhh-HHHHHHHH------hcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhh
Confidence 6999999954 88888773 2566788999999999999999 899999999999999999999999999999
Q ss_pred cccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCC
Q 002155 830 RLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGP 885 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~ 885 (959)
+.-.. ....++.+.|..|.|||++.+..+...+||||.||++.||++|+.-|.+
T Consensus 166 r~e~~--~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g 219 (369)
T KOG0665|consen 166 RTEDT--DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG 219 (369)
T ss_pred cccCc--ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC
Confidence 76432 2466778899999999999999999999999999999999999988763
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.7e-26 Score=234.86 Aligned_cols=199 Identities=37% Similarity=0.499 Sum_probs=172.3
Q ss_pred CCCCCeeccCCCeEEEEEEcCC-CCEEEEEEccccchh-hHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 681 FCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQ-GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
|+..+.||+|++|.||+|...+ ++.+|+|.+...... ..+.+.+|++.++.++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5567889999999999999865 889999999765544 56778899999999999999999999998899999999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+++|.+++..... .+++..++.++.+++.++.++| +.+++|+|++|+||+++.++.++|+|||.+.........
T Consensus 81 ~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~ 154 (225)
T smart00221 81 GGDLFDYLRKKGG---KLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA 154 (225)
T ss_pred CCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc
Confidence 9999999986542 1788899999999999999999 789999999999999999999999999999876543211
Q ss_pred ccccccccccccCCCcC-CCCCCCCcCcchhHHHHHHHHHhCCCCCCC
Q 002155 839 VSTDIAGTFGYIPPEYG-QSGRSTTRGDVYSFGVILLELVTGKEPTGP 885 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~elltg~~p~~~ 885 (959)
......++..|++||.. ....++.++|||++|+++||+++|+.||..
T Consensus 155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 22344677899999988 667788899999999999999999999843
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-28 Score=251.52 Aligned_cols=399 Identities=24% Similarity=0.233 Sum_probs=278.8
Q ss_pred ccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccC-CcccccCCccccCCCCCCEEEcc
Q 002155 139 LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTN-NMLKGHLPKEIGNLSALSVLDLN 217 (959)
Q Consensus 139 L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~L~ 217 (959)
-+.++|..|+|+.++|.+|..+++|+.|+|++|.|+.+-|++|.++.+|..|-+-+ |+|+......|.+|..|+.|.+.
T Consensus 69 tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllN 148 (498)
T KOG4237|consen 69 TVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLN 148 (498)
T ss_pred ceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcC
Confidence 45688888899888888899999999999999999988899999999888777766 88997666789999999999999
Q ss_pred CCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccc
Q 002155 218 SNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGV 297 (959)
Q Consensus 218 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~ 297 (959)
-|++..+..+.|.++++|..|.+-+|.+..+--..|..+..++.+.+..|.+....---+...+........++.....-
T Consensus 149 an~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p 228 (498)
T KOG4237|consen 149 ANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSP 228 (498)
T ss_pred hhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecch
Confidence 99998888888999999999999999888665558889999999998888753211000000000111122233333333
Q ss_pred eecCCCcCCCCCCcccCCc-ccccE-EEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCc
Q 002155 298 FDLSYNRLSGPIPEELGSC-VVVVD-LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNN 375 (959)
Q Consensus 298 l~L~~n~l~~~~p~~~~~~-~~L~~-L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 375 (959)
..+.++++...-+..|... ..+.+ +....+....-+...|..+++|+.|+|++|+|+.+.+.+|.+...+++|+|..|
T Consensus 229 ~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N 308 (498)
T KOG4237|consen 229 YRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRN 308 (498)
T ss_pred HHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcc
Confidence 4455555554444433322 12221 222223333333457899999999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCC-----Cchhhh-----------ccccc
Q 002155 376 QLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQ-----LPSSLS-----------NILNL 439 (959)
Q Consensus 376 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-----~~~~l~-----------~l~~L 439 (959)
+|.......|.++..|++|+|.+|+|+...|.+|..+.+|.+|.|-.|.+... +.+++. .-..+
T Consensus 309 ~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~ 388 (498)
T KOG4237|consen 309 KLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFV 388 (498)
T ss_pred hHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCCCCCchh
Confidence 99877778899999999999999999999999999999999999988877531 111111 11235
Q ss_pred ceEeeccccccCCccccccch-----------hhhhh-ceeccCCcccCCCCCccccCccccceeeeccccccccCCcCC
Q 002155 440 VGLYLQHNKLSGPVDELFSNS-----------AAWKI-ATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDL 507 (959)
Q Consensus 440 ~~L~L~~N~l~~~~~~~~~~~-----------~~~~l-~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 507 (959)
+.+.++++.+.....+ +..- ...-+ +..-.|++.++ .+|..+. ..-.+|++.+|.++ .+|..
T Consensus 389 ~~~~~~dv~~~~~~c~-~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~~-~vp~~- 462 (498)
T KOG4237|consen 389 RQIPISDVAFGDFRCG-GPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAIT-SVPDE- 462 (498)
T ss_pred ccccchhccccccccC-CccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCCC--chhHHHhcccchhc-ccCHH-
Confidence 5566666555332211 0000 00001 12234444444 4444432 34577899999998 77776
Q ss_pred cCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccC
Q 002155 508 GNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAEN 545 (959)
Q Consensus 508 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 545 (959)
.+.+| .+|+++|+++..--..|.++..|.+|-|++|
T Consensus 463 -~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 463 -LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred -HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 66777 8899999988766678888888888888876
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-27 Score=243.71 Aligned_cols=305 Identities=21% Similarity=0.211 Sum_probs=186.1
Q ss_pred ecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecc-ccc
Q 002155 48 LLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFR-NHI 126 (959)
Q Consensus 48 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~~ 126 (959)
+=++-.++ ++|..+- ..-.+++|..|+|+.++|.+|+.+++|++||||+|+|+.+-|++|.++.+|..|.+.+ |+|
T Consensus 52 dCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI 128 (498)
T KOG4237|consen 52 DCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKI 128 (498)
T ss_pred EccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCch
Confidence 33334443 5665322 3467788888888877777888888888888888888887888888888887777766 777
Q ss_pred ccccCcccCCCc-ccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccc
Q 002155 127 YGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEI 205 (959)
Q Consensus 127 ~~~~p~~~~~~~-L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~ 205 (959)
....-..|+.+. ++.|.+.-|++.-+....|+++++|..|++-+|.+..+--..|..+.+++.+.+..|.+-. .
T Consensus 129 ~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic-----d 203 (498)
T KOG4237|consen 129 TDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC-----D 203 (498)
T ss_pred hhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc-----c
Confidence 766666777663 7777777777777777777777777777777777773333477777777777777776321 1
Q ss_pred cCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcc-cCCCeeEcccccCCCCCCCCCcchhhcc
Q 002155 206 GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADL-AQLQCLVLSHNNLSGPIPSKPSSYFRQA 284 (959)
Q Consensus 206 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 284 (959)
++++.|.. ++. ..|..++...-..-..+.++++..+.+..|..- ..+.+=-.+.+..-+..|.
T Consensus 204 CnL~wla~-~~a------~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~--------- 267 (498)
T KOG4237|consen 204 CNLPWLAD-DLA------MNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPA--------- 267 (498)
T ss_pred cccchhhh-HHh------hchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChH---------
Confidence 11111111 111 112223333333444444444444433333221 1111111111111111111
Q ss_pred CCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCC
Q 002155 285 NMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDS 364 (959)
Q Consensus 285 ~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 364 (959)
..+..+++|+.++|++|.|+.+-+.+|.....+++|+|..|+|...-.++|.++..|++|+|.+|+|+.+.|.+|..+
T Consensus 268 --~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~ 345 (498)
T KOG4237|consen 268 --KCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTL 345 (498)
T ss_pred --HHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEeccccccc
Confidence 013344455555555555555666777777777777777777776667777777777777777777777777777777
Q ss_pred CcceEEEeeCcccC
Q 002155 365 IKLQGLYLGNNQLT 378 (959)
Q Consensus 365 ~~L~~L~L~~n~l~ 378 (959)
..|.+|+|-.|.+.
T Consensus 346 ~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 346 FSLSTLNLLSNPFN 359 (498)
T ss_pred ceeeeeehccCccc
Confidence 77777777777654
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-23 Score=260.75 Aligned_cols=279 Identities=23% Similarity=0.247 Sum_probs=129.2
Q ss_pred CCcccccCCCCceeeeccccc------ccccCcccCCCc--ccEEeccCCccccccCcccccccceeEEEcccccccccc
Q 002155 106 IEGVFEKCSNLSQLVIFRNHI------YGSIPEYLSKLP--LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSL 177 (959)
Q Consensus 106 ~~~~~~~l~~L~~L~L~~n~~------~~~~p~~~~~~~--L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~ 177 (959)
.+.+|.+|++|+.|.+..+.. ...+|..+..++ |+.|.+.+|.+. .+
T Consensus 550 ~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-------------------------~l 604 (1153)
T PLN03210 550 HENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-------------------------CM 604 (1153)
T ss_pred cHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-------------------------CC
Confidence 456788888888888866542 223344443332 555555555554 33
Q ss_pred CccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhccc
Q 002155 178 PYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLA 257 (959)
Q Consensus 178 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 257 (959)
|..| ...+|++|+|++|++. .++..+..+++|+.|+|++|.....+| .++.+++|++|+|++|.....+|..+..++
T Consensus 605 P~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~ 681 (1153)
T PLN03210 605 PSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLN 681 (1153)
T ss_pred CCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccC
Confidence 3333 2344555555555544 344444455555555555443222333 244455555555555443334445555555
Q ss_pred CCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccc
Q 002155 258 QLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSL 337 (959)
Q Consensus 258 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~ 337 (959)
+|+.|++++|..-+.+|. ...+.+|+.|++++|.....+|.. ..+|+.|++++|.++. +|..+
T Consensus 682 ~L~~L~L~~c~~L~~Lp~-------------~i~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~-lP~~~ 744 (1153)
T PLN03210 682 KLEDLDMSRCENLEILPT-------------GINLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEE-FPSNL 744 (1153)
T ss_pred CCCEEeCCCCCCcCccCC-------------cCCCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCcccc-ccccc
Confidence 555555554432111111 001223333333333322222221 1234455555555442 23222
Q ss_pred cCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccc
Q 002155 338 SRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTH 417 (959)
Q Consensus 338 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 417 (959)
.+++|++|++.++..... .. .+....+..+...++|+.|++++|...+.+|.+++++++|+.
T Consensus 745 -~l~~L~~L~l~~~~~~~l-~~----------------~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~ 806 (1153)
T PLN03210 745 -RLENLDELILCEMKSEKL-WE----------------RVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEH 806 (1153)
T ss_pred -cccccccccccccchhhc-cc----------------cccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCE
Confidence 345555555554332110 00 001011111223345666666666555556666666666666
Q ss_pred cccCCccccCCCchhhhcccccceEeecccc
Q 002155 418 LDLSFNELDGQLPSSLSNILNLVGLYLQHNK 448 (959)
Q Consensus 418 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 448 (959)
|++++|...+.+|..+ ++++|+.|++++|.
T Consensus 807 L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~ 836 (1153)
T PLN03210 807 LEIENCINLETLPTGI-NLESLESLDLSGCS 836 (1153)
T ss_pred EECCCCCCcCeeCCCC-CccccCEEECCCCC
Confidence 6666654333455444 45666666666653
|
syringae 6; Provisional |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=9e-25 Score=268.32 Aligned_cols=195 Identities=20% Similarity=0.238 Sum_probs=137.3
Q ss_pred CCC-Cceeccccce-------ecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 002155 732 VKH-QNLVPLLGYC-------SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHI 803 (959)
Q Consensus 732 l~h-~niv~~~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 803 (959)
++| +||++++++| ...+..+.+|||+ +++|.++++... ..+++.++..++.||++||+||| ++||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~gI 101 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD---RSVDAFECFHVFRQIVEIVNAAH---SQGI 101 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc---ccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 345 5777888877 2234567788987 569999997543 35889999999999999999999 8999
Q ss_pred EeCCCCCCCEEECCC-------------------CcEEEcccccccccccccc---------------cccccccccccc
Q 002155 804 IHRDIKASNILLNEE-------------------FEAKVADFGLARLISACET---------------HVSTDIAGTFGY 849 (959)
Q Consensus 804 vH~dlk~~Nill~~~-------------------~~~kl~Dfg~~~~~~~~~~---------------~~~~~~~gt~~y 849 (959)
+||||||+|||++.. +.+|++|||+++....... .......||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 999999999999653 4556666666653211000 000113578899
Q ss_pred cCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHH
Q 002155 850 IPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKML 929 (959)
Q Consensus 850 ~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 929 (959)
||||++.+..++.++|||||||++|||++|.+|+.... ... ..+... ...+.. ........
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~------~~~----~~~~~~----~~~~~~-----~~~~~~~~ 242 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS------RTM----SSLRHR----VLPPQI-----LLNWPKEA 242 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH------HHH----HHHHHh----hcChhh-----hhcCHHHH
Confidence 99999999999999999999999999999888754211 011 111110 011110 11122345
Q ss_pred HHHHHcccCCCCCCCCHHHHHHH
Q 002155 930 RIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 930 ~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.++.+||++||.+||++.|++++
T Consensus 243 ~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 243 SFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHhCCCChhhCcChHHHhhc
Confidence 77889999999999999999864
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-23 Score=210.33 Aligned_cols=168 Identities=22% Similarity=0.229 Sum_probs=126.6
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
|+|.++++... ..+++.+++.++.|+++||+||| +.+ ||+||+++.++.+|+ ||.+......
T Consensus 1 GsL~~~l~~~~---~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~---- 62 (176)
T smart00750 1 VSLADILEVRG---RPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPE---- 62 (176)
T ss_pred CcHHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeeccc----
Confidence 68999998653 35899999999999999999999 555 999999999999999 9998765431
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (959)
...|++.|+|||++.+..++.++|||||||++|||++|+.||...... ......+....... .+... .
T Consensus 63 --~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~---~~~~~~~~~~~~~~------~~~~~-~ 130 (176)
T smart00750 63 --QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL---SAILEILLNGMPAD------DPRDR-S 130 (176)
T ss_pred --cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh---cHHHHHHHHHhccC------Ccccc-c
Confidence 125789999999999999999999999999999999999998543211 11111111111111 01000 1
Q ss_pred CCHHHHH--HHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 920 DSKPMML--KMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 920 ~~~~~~~--~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
....... .+.+++.+||+.||++||++.|+++++..+.
T Consensus 131 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 131 NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 1122222 5889999999999999999999999987764
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.2e-23 Score=257.84 Aligned_cols=344 Identities=18% Similarity=0.189 Sum_probs=207.4
Q ss_pred cCccCCCCCcEEEcCCCc------CCCCCCcccCCCC-CCcEEEccCccccccCCcccccCCCCceeeecccccccccCc
Q 002155 60 PEIGNCSMLKSISLSNNF------LSGSIPRELCTSE-SLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPE 132 (959)
Q Consensus 60 ~~~~~l~~L~~L~Ls~n~------l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~ 132 (959)
.+|.++++|+.|.+..+. +...+|+.|..++ +|+.|++.+|.++. .|..| ...+|+.|+|.+|.+... |.
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~-lP~~f-~~~~L~~L~L~~s~l~~L-~~ 628 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRC-MPSNF-RPENLVKLQMQGSKLEKL-WD 628 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCC-CCCcC-CccCCcEEECcCcccccc-cc
Confidence 345556666666664432 2223444454443 46666666666553 33333 345666666666665533 22
Q ss_pred ccCCC-cccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCC
Q 002155 133 YLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSAL 211 (959)
Q Consensus 133 ~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 211 (959)
.+..+ +|++|+|++|+....+|. +..+++|+.|++.+|.....+|..++++++|+.|++++|..-..+|..+ ++++|
T Consensus 629 ~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL 706 (1153)
T PLN03210 629 GVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSL 706 (1153)
T ss_pred ccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCC
Confidence 23222 466666666554444553 5667777777777776555778888888888888888865443666655 78888
Q ss_pred CEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccc
Q 002155 212 SVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSF 291 (959)
Q Consensus 212 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~ 291 (959)
+.|++++|.....+|.. ..+|++|+|++|.++.. |..+ .+++|+.|++.++.... +.
T Consensus 707 ~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~l-P~~~-~l~~L~~L~l~~~~~~~-l~----------------- 763 (1153)
T PLN03210 707 YRLNLSGCSRLKSFPDI---STNISWLDLDETAIEEF-PSNL-RLENLDELILCEMKSEK-LW----------------- 763 (1153)
T ss_pred CEEeCCCCCCccccccc---cCCcCeeecCCCccccc-cccc-cccccccccccccchhh-cc-----------------
Confidence 88888888655455543 35788888888888744 5444 57888888887654320 00
Q ss_pred cccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEE
Q 002155 292 IQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLY 371 (959)
Q Consensus 292 l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 371 (959)
+.+....+......++|+.|++++|.....+|..+.++++|+.|++++|..-..+|..+ .+++|+.|+
T Consensus 764 -----------~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~ 831 (1153)
T PLN03210 764 -----------ERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLD 831 (1153)
T ss_pred -----------ccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEE
Confidence 00000111112223456666666665555566667777777777777654333445444 566777777
Q ss_pred eeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCc-cccCCCchhhhcccccceEeecccc
Q 002155 372 LGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN-ELDGQLPSSLSNILNLVGLYLQHNK 448 (959)
Q Consensus 372 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~l~~l~~L~~L~L~~N~ 448 (959)
+++|.....+|.. .++|+.|+|++|.|+ .+|.++..+++|++|+|++| ++. .+|..+..+++|+.+++++|.
T Consensus 832 Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 832 LSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 7776543344432 246777777777777 46677777777777777773 444 566667777777777777764
|
syringae 6; Provisional |
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.2e-23 Score=206.22 Aligned_cols=259 Identities=17% Similarity=0.221 Sum_probs=198.5
Q ss_pred cCCCCCCeeccCCCeEEEEEE-cCCCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
-.|+++++||+|+||++|.|+ .-+++.||||.-...+ +..++..|.+.++.+. .++|..+|.+-.++.+..+|||.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 368899999999999999997 3478999999754432 2356788999998885 68999998888888889999998
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC-----cEEEcccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF-----EAKVADFGLARL 831 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-----~~kl~Dfg~~~~ 831 (959)
. |.+|+|+..-+. +.++..++..+|.|++.-++|+| ++.+|+|||||+|+||+..+ .+.++|||+|+.
T Consensus 106 L-GPSLEDLFD~Cg---R~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 106 L-GPSLEDLFDLCG---RRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred h-CcCHHHHHHHhc---CcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 8 679999998776 46889999999999999999999 89999999999999997543 589999999998
Q ss_pred ccccccccc------ccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhc
Q 002155 832 ISACETHVS------TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK 905 (959)
Q Consensus 832 ~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (959)
+.+...... ....||.+||+-....+.+.+++.|.-|+|=++++++.|..||++-..+.. ..-.+.+..
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tn-----K~kYeKIGe 253 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTN-----KEKYEKIGE 253 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcch-----HHHHHHhcc
Confidence 876544332 345799999999999999999999999999999999999999986533311 111112211
Q ss_pred CccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
... ......-+..++.+|...+.-.-..+-++-|+.+-+...+.++
T Consensus 254 ~Kr-----~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dv 299 (449)
T KOG1165|consen 254 TKR-----STPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDV 299 (449)
T ss_pred ccc-----cCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 111 1111111222444555555556667888889988877766654
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-22 Score=220.44 Aligned_cols=259 Identities=22% Similarity=0.217 Sum_probs=191.3
Q ss_pred CCCCCCeeccCCCeEEEEEEcCCC--CEEEEEEccccchhhHHHHHHHHHHHhcCCC----Cceeccccce-ecCCceEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALPDG--KTVAVKKLSQAKTQGHREFTAEMETLGKVKH----QNLVPLLGYC-SFDEEKLL 752 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~~~--~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~-~~~~~~~l 752 (959)
+|.+.+.||+|+||.||.|..... ..+|+|............+..|..++..+.. +++..+++.. ..+...|+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999997653 4788888765433322367778888888862 5888888888 47778999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC-----CcEEEcccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE-----FEAKVADFG 827 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-----~~~kl~Dfg 827 (959)
||+.+ |.+|.++..... ...++..++.+++.|++.+|+++| +.|++||||||.|+.++.. ..+++.|||
T Consensus 99 VM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred EEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 99987 779999886554 456899999999999999999999 8999999999999999865 369999999
Q ss_pred ccc--ccccccc-------cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHH
Q 002155 828 LAR--LISACET-------HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGW 898 (959)
Q Consensus 828 ~~~--~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 898 (959)
+++ .+..... .....+.||.+|++++...+...+++.|+||++.++.|+..|..||........ ...
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~----~~~ 248 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL----KSK 248 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch----HHH
Confidence 998 3321111 112345699999999999999999999999999999999999999854322211 111
Q ss_pred HHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 899 VFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
+....... .... ........ +.++...+-..+..++|....+...+++..
T Consensus 249 ~~~~~~~~----~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~ 298 (322)
T KOG1164|consen 249 FEKDPRKL----LTDR--FGDLKPEE---FAKILEYIDSLDYEDKPDYEKLAELLKDVF 298 (322)
T ss_pred HHHHhhhh----cccc--ccCCChHH---HHHHHHHhhccCCcCCCCHHHHHHHHHHHH
Confidence 11111111 1110 11122233 333334445589999999999998887653
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=9e-23 Score=220.97 Aligned_cols=164 Identities=25% Similarity=0.277 Sum_probs=127.7
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC--CCCEEEEEEcccc-----chhhHHHHHHHHHHHhcCCCCceec-cccceecCC
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP--DGKTVAVKKLSQA-----KTQGHREFTAEMETLGKVKHQNLVP-LLGYCSFDE 748 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~-~~~~~~~~~ 748 (959)
..++|.+.++||+|+||+||+|.++ +++.||||++... .....+.+.+|++++++++|+|+++ +++ .+
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~----~~ 91 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA----TG 91 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----cC
Confidence 4578999999999999999999864 5777899986532 1223456889999999999999985 443 24
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCC-CCCCEEECCCCcEEEcccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDI-KASNILLNEEFEAKVADFG 827 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl-k~~Nill~~~~~~kl~Dfg 827 (959)
..|+||||++|++|... .. .. ...++.|+++|++||| +.||+|||| ||+||+++.++++||+|||
T Consensus 92 ~~~LVmE~~~G~~L~~~-~~-------~~---~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLA-RP-------HG---DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred CcEEEEEccCCCCHHHh-Cc-------cc---hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 67999999999999632 11 01 1467889999999999 899999999 9999999999999999999
Q ss_pred ccccccccccccc-------ccccccccccCCCcCCCC
Q 002155 828 LARLISACETHVS-------TDIAGTFGYIPPEYGQSG 858 (959)
Q Consensus 828 ~~~~~~~~~~~~~-------~~~~gt~~y~aPE~~~~~ 858 (959)
+|+.+........ ....+++.|+|||.+...
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9987654321111 244678889999986544
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=236.95 Aligned_cols=264 Identities=27% Similarity=0.301 Sum_probs=144.7
Q ss_pred CCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcc
Q 002155 186 ALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLS 265 (959)
Q Consensus 186 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 265 (959)
.-..|+|++|.++ .+|..+. .+|+.|++++|.|+. +|. .+++|++|+|++|+|+.+ |.. .++|+.|+++
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~LtsL-P~l---p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTSL-PVL---PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCcc-cCc---ccccceeecc
Confidence 3456677777766 4565554 356777777777663 443 235667777777766643 322 3456666666
Q ss_pred cccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCE
Q 002155 266 HNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTT 345 (959)
Q Consensus 266 ~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 345 (959)
+|.++. +|.. ...|+.|++.+|+++.+ |. .+++|+.
T Consensus 271 ~N~L~~-------------------------------------Lp~l---p~~L~~L~Ls~N~Lt~L-P~---~p~~L~~ 306 (788)
T PRK15387 271 SNPLTH-------------------------------------LPAL---PSGLCKLWIFGNQLTSL-PV---LPPGLQE 306 (788)
T ss_pred CCchhh-------------------------------------hhhc---hhhcCEEECcCCccccc-cc---cccccce
Confidence 666541 1111 12344455555555532 22 1356677
Q ss_pred EEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccc
Q 002155 346 LDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNEL 425 (959)
Q Consensus 346 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 425 (959)
|++++|++++ +|.. ..+|+.|++++|++++ +|.. ..+|+.|+|++|+|++ +|... ++|+.|++++|+|
T Consensus 307 LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~lp---~~L~~L~Ls~N~L 374 (788)
T PRK15387 307 LSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTLP---SELYKLWAYNNRL 374 (788)
T ss_pred eECCCCcccc-CCCC---cccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCCC---cccceehhhcccc
Confidence 7777777664 2322 2346666677777663 3421 1356777777777763 34322 3566667777777
Q ss_pred cCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCc
Q 002155 426 DGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPP 505 (959)
Q Consensus 426 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 505 (959)
+ .+|.. ..+|+.|++++|+|++++.. . ..+..|++++|.|++ +|.. ..+|+.|+|++|+|+ .+|.
T Consensus 375 ~-~LP~l---~~~L~~LdLs~N~Lt~LP~l-~-----s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~ 439 (788)
T PRK15387 375 T-SLPAL---PSGLKELIVSGNRLTSLPVL-P-----SELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPE 439 (788)
T ss_pred c-cCccc---ccccceEEecCCcccCCCCc-c-----cCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccCh
Confidence 6 34432 24566777777777655432 1 134455555555543 3332 234555666666665 5566
Q ss_pred CCcCCCCCcEEeCCCCcCCCCCCccc
Q 002155 506 DLGNLMQLEYLDVSRNRLCGQIPETM 531 (959)
Q Consensus 506 ~~~~l~~L~~L~Ls~N~l~~~~p~~~ 531 (959)
.+..+++|+.|+|++|+|++..|..+
T Consensus 440 sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 440 SLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred HHhhccCCCeEECCCCCCCchHHHHH
Confidence 66666666666666666665555444
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.6e-23 Score=195.01 Aligned_cols=260 Identities=18% Similarity=0.267 Sum_probs=195.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEE-cCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCC-CceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKH-QNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e 755 (959)
...|.+.++||+|+||.+|.|. ..+|..||+|+-+.... ..++..|.++++.+++ ..|..+..|..++.+..+||+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 4678999999999999999997 45799999998754332 3457789999999975 678888888888999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC---CcEEEccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE---FEAKVADFGLARLI 832 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~~~ 832 (959)
.. |.+|++++.-.. ..++..+++-.|.|++.-++|+| .++++||||||+|+|.+-+ .++.++|||+|+.+
T Consensus 92 LL-GPsLEdLfnfC~---R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFCS---RRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred cc-CccHHHHHHHHh---hhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhh
Confidence 88 779999887654 45788999999999999999999 8999999999999999754 47899999999887
Q ss_pred cccccc------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 833 SACETH------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 833 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
.+.... ......||.+|.+-....+...+++.|+-|+|.++.++--|..||+........+. .+.+.+.
T Consensus 165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QK-----yEkI~Ek 239 (341)
T KOG1163|consen 165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQK-----YEKISEK 239 (341)
T ss_pred ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHH-----HHHHHHh
Confidence 543222 12356799999998888888889999999999999999999999986433211111 1111111
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
..... ...-+..++.++.-.+.-|-..--++-|+..-+-+.+.-+
T Consensus 240 K~s~~-----ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriL 284 (341)
T KOG1163|consen 240 KMSTP-----IEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRIL 284 (341)
T ss_pred hcCCC-----HHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHH
Confidence 11110 0111222334555566668888888888887776665544
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.9e-22 Score=229.90 Aligned_cols=86 Identities=31% Similarity=0.453 Sum_probs=53.0
Q ss_pred CCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccC
Q 002155 342 NLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLS 421 (959)
Q Consensus 342 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 421 (959)
+|+.|++++|+|+. +|.. ..+|+.|++++|++++ +|.. ..+|+.|++++|+|+ .+|..+.++++|+.|+|+
T Consensus 383 ~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs 453 (788)
T PRK15387 383 GLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 453 (788)
T ss_pred ccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECC
Confidence 45555555555553 2322 2356666666666663 4432 235667777777777 567777777788888888
Q ss_pred CccccCCCchhhhcc
Q 002155 422 FNELDGQLPSSLSNI 436 (959)
Q Consensus 422 ~N~l~~~~~~~l~~l 436 (959)
+|++++..+..+..+
T Consensus 454 ~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 454 GNPLSERTLQALREI 468 (788)
T ss_pred CCCCCchHHHHHHHH
Confidence 888877666655443
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-22 Score=196.83 Aligned_cols=246 Identities=23% Similarity=0.381 Sum_probs=184.0
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccc--cchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCC
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQ--AKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGS 761 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 761 (959)
.-+|.+...|+.|+|+|. |..+++|++.- ......++|..|.-.++-+.||||..++|.|.......++..||+.|+
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 446889999999999995 56677777642 233344678999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEc--ccccccccccccccc
Q 002155 762 LDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVA--DFGLARLISACETHV 839 (959)
Q Consensus 762 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~--Dfg~~~~~~~~~~~~ 839 (959)
|...++... ....+..++.+++.++|+|++|||+- ++-|-.--+.+..|++|++...+|+ |--++..
T Consensus 274 lynvlhe~t--~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfq-------- 342 (448)
T KOG0195|consen 274 LYNVLHEQT--SVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ-------- 342 (448)
T ss_pred HHHHHhcCc--cEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeee--------
Confidence 999998754 35678889999999999999999954 3445555688999999999876654 4333221
Q ss_pred cccccccccccCCCcCCCCCC---CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 840 STDIAGTFGYIPPEYGQSGRS---TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~---~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......|.||+||.++.++. -.++|+|||++++||+.|+..||....+- + .. -.+ ..+.+++.+
T Consensus 343 e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspm-e---cg----mki----aleglrv~i 410 (448)
T KOG0195|consen 343 EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPM-E---CG----MKI----ALEGLRVHI 410 (448)
T ss_pred ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCch-h---hh----hhh----hhccccccC
Confidence 112345789999999887764 46789999999999999999998643221 1 00 000 011122222
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+ .....+.+++.-|+..||.+||.+..|+-.|++++
T Consensus 411 pp----gis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 411 PP----GISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred CC----CccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 22 22334556666799999999999999999999885
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-21 Score=225.70 Aligned_cols=252 Identities=22% Similarity=0.213 Sum_probs=185.8
Q ss_pred CCCeeccCCCeEEEEEEcC-CCCEEEEEEcc----ccc-h-hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 683 KTNIIGDGGFGTVYKAALP-DGKTVAVKKLS----QAK-T-QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~----~~~-~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
..+++|.|++|.|+.+... ....++.|..+ ... . .....+..|+.+-+.+.|||++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4678999999988877643 34444444332 111 1 111225668888888999999988888777766666699
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
||++ +|..++.... .+...++-.+++|+..|+.|+| ..|+.|||+|++|++++.+|.+||+|||.+..+...
T Consensus 402 ~~~~-Dlf~~~~~~~----~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNG----KLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred cccH-HHHHHHhccc----ccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 9999 9999997752 4677888999999999999999 899999999999999999999999999999776433
Q ss_pred cc---cccccccccccccCCCcCCCCCCC-CcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 836 ET---HVSTDIAGTFGYIPPEYGQSGRST-TRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 836 ~~---~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.. ......+|+..|+|||++.+..|. +..||||.|+++..|.+|+.||.......... .......+....
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~------~~~~~~~~~~~~ 547 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF------KTNNYSDQRNIF 547 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch------hhhccccccccc
Confidence 22 445667899999999999999986 56799999999999999999997654332211 000000000000
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
................++.+|++.||.+|.|+++|++
T Consensus 548 ---~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 548 ---EGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred ---cChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 0011123345556678899999999999999999976
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-19 Score=202.52 Aligned_cols=261 Identities=27% Similarity=0.395 Sum_probs=196.5
Q ss_pred CCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchh---hHHHHHHHHHHHhcCCCC-ceeccccceecCCceEEEEEe
Q 002155 681 FCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQ---GHREFTAEMETLGKVKHQ-NLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e~ 756 (959)
|+..+.||.|+||.||++.+. ..+|+|.+...... ....+.+|+..++.+.|+ +++++.+++......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999986 78999988654332 366788999999999988 799999999777778999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC-cEEEcccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF-EAKVADFGLARLISAC 835 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~~~~ 835 (959)
+.++++.+++...... ..+.......++.|++.+++|+| ..+++|||+||+||+++..+ .++++|||.+......
T Consensus 80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 80 VDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred CCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 9999999777654321 25788899999999999999999 88999999999999999988 7999999999755433
Q ss_pred ccc-----ccccccccccccCCCcCCC---CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 836 ETH-----VSTDIAGTFGYIPPEYGQS---GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 836 ~~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
... ......|+..|+|||...+ ..++...|+||+|++++++++|..||...... .........+....
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~ 231 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS----SATSQTLKIILELP 231 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc----ccHHHHHHHHHhcC
Confidence 221 2355679999999999887 57889999999999999999999996543221 01112222222221
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. .................+.+++..|+..+|..|.++.+....
T Consensus 232 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 232 TP-SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred Cc-ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11 000000000002223467788889999999999998877653
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.7e-21 Score=192.22 Aligned_cols=171 Identities=12% Similarity=0.148 Sum_probs=132.3
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHH---H------HHHHHHHHhcCCCCceeccccceecC
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHR---E------FTAEMETLGKVKHQNLVPLLGYCSFD 747 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~---~------~~~e~~~l~~l~h~niv~~~~~~~~~ 747 (959)
..++|+..+++|.|+||.||.+.. ++..+|+|.+......... . +.+|+..+.++.||+|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 368899999999999999999766 5778999999754322222 1 67899999999999999998875432
Q ss_pred --------CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC
Q 002155 748 --------EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF 819 (959)
Q Consensus 748 --------~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 819 (959)
+..++||||++|.+|.++.. ++. ....+++.++..+| ..|++|||+||+||++++++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g 172 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG 172 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC
Confidence 35789999999999988732 222 24568999999999 89999999999999999988
Q ss_pred cEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHH
Q 002155 820 EAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELV 877 (959)
Q Consensus 820 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell 877 (959)
++++|||........ ... ..+.....+..++|+|+||+++....
T Consensus 173 -i~liDfg~~~~~~e~-~a~------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 -LRIIDLSGKRCTAQR-KAK------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred -EEEEECCCcccccch-hhH------------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999988654211 000 11344455778999999999876543
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-21 Score=222.70 Aligned_cols=249 Identities=23% Similarity=0.247 Sum_probs=178.3
Q ss_pred CCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc-hhhHHHHHH---HHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK-TQGHREFTA---EMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~---e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
+|...+.+|++.|=+|.+|+++.|. |+||++.+.. ....+.|.+ |++ ...++|||++++.-+-..+...|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5667889999999999999998887 9999875443 444444544 444 555689999999888777888899999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc--
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS-- 833 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~-- 833 (959)
|+.+ +|.|.+..+. .+...+...|+.|++.|+..+| ..||+|||||.+|||++.-.-+.|+||...+...
T Consensus 102 yvkh-nLyDRlSTRP----FL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP 173 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRP----FLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLP 173 (1431)
T ss_pred HHhh-hhhhhhccch----HHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCC
Confidence 9966 8888886543 4677788899999999999999 8999999999999999999999999998765432
Q ss_pred cccccccc----cccccccccCCCcCCCC----------C-CCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHH
Q 002155 834 ACETHVST----DIAGTFGYIPPEYGQSG----------R-STTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVG 897 (959)
Q Consensus 834 ~~~~~~~~----~~~gt~~y~aPE~~~~~----------~-~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~ 897 (959)
.+.+.... ....-.+|.|||.+-.. + .+++-||||+||++.|+++ |++||.-. .+.+
T Consensus 174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-------QL~a 246 (1431)
T KOG1240|consen 174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-------QLLA 246 (1431)
T ss_pred CCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-------HHHh
Confidence 11111111 11234589999954331 2 4678899999999999999 67777421 0000
Q ss_pred HHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 898 WVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
.+.+. ..++...-..-.+ ..+..++..|++.||++|.+|++.++.-+.
T Consensus 247 -----Yr~~~---~~~~e~~Le~Ied--~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 247 -----YRSGN---ADDPEQLLEKIED--VSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred -----HhccC---ccCHHHHHHhCcC--ccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 11110 1111000000000 146788899999999999999999987543
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.2e-20 Score=220.18 Aligned_cols=120 Identities=30% Similarity=0.393 Sum_probs=55.2
Q ss_pred cceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeec
Q 002155 366 KLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQ 445 (959)
Q Consensus 366 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 445 (959)
+|+.|++++|.++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|+|+ .+|..+. ++|+.|+++
T Consensus 305 sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs 375 (754)
T PRK15370 305 GITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVS 375 (754)
T ss_pred hHHHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECC
Confidence 34444444444442 222221 345555555555553 333332 45666666666665 3444332 456666666
Q ss_pred cccccCCccccccchhhhhhceeccCCcccCCCCCcc----ccCccccceeeecccccc
Q 002155 446 HNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRS----LGNLSYLTNLDLHENKFT 500 (959)
Q Consensus 446 ~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~ 500 (959)
+|+|+.+|+.... .++.|++++|+|. .+|.. +..++.+..|+|.+|.++
T Consensus 376 ~N~Lt~LP~~l~~-----sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 376 RNALTNLPENLPA-----ALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CCcCCCCCHhHHH-----HHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 6666655443211 2334444444443 22222 222344555555555554
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.7e-20 Score=184.05 Aligned_cols=139 Identities=16% Similarity=0.150 Sum_probs=108.0
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchh--h-------H-----------------HHHHHHHHHHhcCCCCce
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQ--G-------H-----------------REFTAEMETLGKVKHQNL 737 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~-------~-----------------~~~~~e~~~l~~l~h~ni 737 (959)
...||+|+||.||+|...+|+.||||+++..... . . .....|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4579999999999999888999999998654211 0 0 112349999999988877
Q ss_pred eccccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHH-HhcCCCCeEeCCCCCCCEEEC
Q 002155 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHGFTPHIIHRDIKASNILLN 816 (959)
Q Consensus 738 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~dlk~~Nill~ 816 (959)
.....+.. ...++||||++++++....... ..++..++..++.|++.+++|+ | +.||+||||||+||+++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~----~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~ 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKD----APLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYH 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhhc----CCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEE
Confidence 44333222 2348999999988776543222 2478889999999999999999 6 78999999999999998
Q ss_pred CCCcEEEccccccccc
Q 002155 817 EEFEAKVADFGLARLI 832 (959)
Q Consensus 817 ~~~~~kl~Dfg~~~~~ 832 (959)
++.++|+|||+|...
T Consensus 153 -~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 -DGKLYIIDVSQSVEH 167 (190)
T ss_pred -CCcEEEEEccccccC
Confidence 478999999999754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.4e-20 Score=218.53 Aligned_cols=287 Identities=24% Similarity=0.369 Sum_probs=191.5
Q ss_pred hhhcCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCcccc
Q 002155 24 AAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLT 103 (959)
Q Consensus 24 ~~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 103 (959)
+...+.-.+.+|..+. +.|+.|+|++|++. .+|..+. ++|++|+|++|+++ .+|..+. .+|+.|+|++|.++
T Consensus 183 L~L~~~~LtsLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~ 254 (754)
T PRK15370 183 LRLKILGLTTIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT 254 (754)
T ss_pred EEeCCCCcCcCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC
Confidence 4444445557787665 47888999998887 6776554 58899999999888 6676553 57889999999888
Q ss_pred ccCCcccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccC
Q 002155 104 GTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGN 183 (959)
Q Consensus 104 ~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 183 (959)
. +|..+. ++|+.|++++|.+.. +|..+. .+|++|++++|++++ +|..+. ++|+.|++++|.++ .+|..+
T Consensus 255 ~-LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~-~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt-~LP~~l-- 323 (754)
T PRK15370 255 E-LPERLP--SALQSLDLFHNKISC-LPENLP-EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLT-ALPETL-- 323 (754)
T ss_pred c-CChhHh--CCCCEEECcCCccCc-cccccC-CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccc-cCCccc--
Confidence 4 444443 578889999888874 555443 268889999998885 444432 47888899999888 455544
Q ss_pred CcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeE
Q 002155 184 AAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLV 263 (959)
Q Consensus 184 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 263 (959)
.++|+.|++++|.++. +|..+. ++|+.|+|++|.|+ .+|..+. ++|++|+|++|+++.+ |..+. ..|+.|+
T Consensus 324 ~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~L-P~~l~--~sL~~Ld 394 (754)
T PRK15370 324 PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALTNL-PENLP--AALQIMQ 394 (754)
T ss_pred cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCCCC-CHhHH--HHHHHHh
Confidence 3688999999999884 676664 68999999999988 4666553 5799999999999855 55443 3688899
Q ss_pred cccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcc-cCCccccCCCC
Q 002155 264 LSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSG-KIPGSLSRLTN 342 (959)
Q Consensus 264 Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~-~~~~~~~~l~~ 342 (959)
+++|+|.. +|...... ...+..+..+++.+|.++. ..+..|+.| +..+...+ .++.....+.+
T Consensus 395 Ls~N~L~~-LP~sl~~~--------~~~~~~l~~L~L~~Npls~------~tl~~L~~L-l~s~~~~gp~i~~~~~~~~~ 458 (754)
T PRK15370 395 ASRNNLVR-LPESLPHF--------RGEGPQPTRIIVEYNPFSE------RTIQNMQRL-MSSVGYQGPRVLFAMGDFSI 458 (754)
T ss_pred hccCCccc-CchhHHHH--------hhcCCCccEEEeeCCCccH------HHHHHHHHh-hhcccccCCccccccccccc
Confidence 99998873 33211111 1123456678888888762 344445555 33333322 22333334444
Q ss_pred CCEEEccCCCCC
Q 002155 343 LTTLDLSRNQLT 354 (959)
Q Consensus 343 L~~L~Ls~n~l~ 354 (959)
++....-.+.+.
T Consensus 459 l~~~~~l~~a~~ 470 (754)
T PRK15370 459 VRVTRPLHQAVQ 470 (754)
T ss_pred ccccchHHHHHh
Confidence 444333333333
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-19 Score=198.82 Aligned_cols=217 Identities=26% Similarity=0.417 Sum_probs=166.2
Q ss_pred HhcCCCCceeccccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCC
Q 002155 729 LGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDI 808 (959)
Q Consensus 729 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl 808 (959)
|+.+.|.|+.+++|.+..+...+.|.+||..|+|.|.+.... ..+++.....+++++++|++|+|. +....|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~---~~~d~~F~~s~~rdi~~Gl~ylh~--s~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED---IKLDYFFILSFIRDISKGLAYLHN--SPIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc---cCccHHHHHHHHHHHHHHHHHHhc--Ccceeeeee
Confidence 457889999999999999999999999999999999998743 468899999999999999999995 333499999
Q ss_pred CCCCEEECCCCcEEEcccccccccccc-cccccccccccccccCCCcCCCCC-------CCCcCcchhHHHHHHHHHhCC
Q 002155 809 KASNILLNEEFEAKVADFGLARLISAC-ETHVSTDIAGTFGYIPPEYGQSGR-------STTRGDVYSFGVILLELVTGK 880 (959)
Q Consensus 809 k~~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DvwslG~il~elltg~ 880 (959)
+++|++++..+.+|++|||+....... .........-..-|.|||.+.... .+.++||||||++++|++++.
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 999999999999999999998765320 111111122345799999876642 467799999999999999999
Q ss_pred CCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 881 EPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 881 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.||+......+..++...+ +. .....++|.+.... +....+..++.+||..+|++||+++++-..++.+.
T Consensus 156 ~~~~~~~~~~~~~eii~~~----~~-~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 156 GPFDLRNLVEDPDEIILRV----KK-GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred CccccccccCChHHHHHHH----Hh-cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 9998765544433333332 22 12233344443222 34447889999999999999999999988887653
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.3e-19 Score=175.53 Aligned_cols=186 Identities=18% Similarity=0.112 Sum_probs=138.5
Q ss_pred CCCeeccCCCeEEEEEEcCCCCEEEEEEccccchh----hHHHHHHHHHHHhcCC-CCceeccccceecCCceEEEEEec
Q 002155 683 KTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQ----GHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
+..+|++|+||+||.+.. .+.+++.+.+...... ....+.+|+++++++. |+++++++++ ...+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 467899999999998776 6788888877654321 1125789999999995 4778888875 4579999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCC-CCCCEEECCCCcEEEccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDI-KASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl-k~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
.|.+|...... ....++.|++.+++++| ..||+|||| ||+||+++.++.++|+|||++.......
T Consensus 81 ~G~~L~~~~~~-----------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 81 AGAAMYQRPPR-----------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred cCccHHhhhhh-----------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 99998654321 11357789999999999 899999999 7999999999999999999998554322
Q ss_pred cc----c--------cccccccccccCCCcC--CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 002155 837 TH----V--------STDIAGTFGYIPPEYG--QSGRSTTRGDVYSFGVILLELVTGKEPTGPEF 887 (959)
Q Consensus 837 ~~----~--------~~~~~gt~~y~aPE~~--~~~~~~~~~DvwslG~il~elltg~~p~~~~~ 887 (959)
.. . ..-...++.|++|+.. ...+--.+.++++-|.-+|.++||+.++....
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 10 0 0011357788888732 22222256799999999999999999875443
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-19 Score=187.53 Aligned_cols=233 Identities=21% Similarity=0.299 Sum_probs=148.9
Q ss_pred CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCC----------Cceecccccee-
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKH----------QNLVPLLGYCS- 745 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h----------~niv~~~~~~~- 745 (959)
+..++.||.|+++.||.+++. +++.+|||++... .....+++.+|.-....+.+ -.++-.++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 345678999999999999986 5899999987532 23345667777655555322 11111112111
Q ss_pred --------cC---C-----ceEEEEEeccCCCHHHHHhh---hcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeC
Q 002155 746 --------FD---E-----EKLLVYEYMVNGSLDLWLRN---RTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHR 806 (959)
Q Consensus 746 --------~~---~-----~~~lv~e~~~~g~L~~~l~~---~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 806 (959)
.. . ..+++|+-+ .++|.+++.. ............+..+..|+++.+++|| ..|+||+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEec
Confidence 11 1 125688877 4588887543 3222223445566677799999999999 8999999
Q ss_pred CCCCCCEEECCCCcEEEcccccccccccccccccccccccccccCCCcCCC--------CCCCCcCcchhHHHHHHHHHh
Q 002155 807 DIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQS--------GRSTTRGDVYSFGVILLELVT 878 (959)
Q Consensus 807 dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~il~ellt 878 (959)
||+|+|++++.+|.++|+||+.....+.... . ...+..|.+||.... -.++.+.|.|++|+++|.+++
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~---~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYR---C-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEE---G-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceee---c-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 9999999999999999999998876543211 1 234578999996433 246889999999999999999
Q ss_pred CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCC
Q 002155 879 GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMR 943 (959)
Q Consensus 879 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 943 (959)
|+.||+........ .| ....+. +.+..+..+|..++++||++|
T Consensus 246 ~~lPf~~~~~~~~~----~~-----------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADP----EW-----------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTS----GG-----------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCccccc----cc-----------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999765332110 00 222344 777889999999999999988
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.7e-19 Score=176.82 Aligned_cols=139 Identities=18% Similarity=0.182 Sum_probs=109.2
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchh---------------------h-----HHHHHHHHHHHhcCCCCce
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQ---------------------G-----HREFTAEMETLGKVKHQNL 737 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~e~~~l~~l~h~ni 737 (959)
...||+|+||.||+|+..+|+.||||+++..... . ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4679999999999999878999999998753211 0 1123578999999999987
Q ss_pred eccccceecCCceEEEEEeccCCCHHHH-HhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEE
Q 002155 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLW-LRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT-PHIIHRDIKASNILL 815 (959)
Q Consensus 738 v~~~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlk~~Nill 815 (959)
.....+... ..++||||++|+++... +.. ..++..++..++.|++.++.++| . .||+||||||+||++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~-----~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll 151 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD-----VPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILY 151 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh-----ccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEE
Confidence 544433322 35899999998865433 332 13667888999999999999999 6 899999999999999
Q ss_pred CCCCcEEEcccccccccc
Q 002155 816 NEEFEAKVADFGLARLIS 833 (959)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~ 833 (959)
+ +++++|+|||++....
T Consensus 152 ~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 152 H-DGKPYIIDVSQAVELD 168 (190)
T ss_pred E-CCCEEEEEcccceecC
Confidence 9 7899999999997654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.4e-20 Score=203.89 Aligned_cols=225 Identities=25% Similarity=0.308 Sum_probs=176.5
Q ss_pred eeccCCCeEEEEEEc----CCCCEEEEEEccccchh--hHHHHHHHHHHHhcCC-CCceeccccceecCCceEEEEEecc
Q 002155 686 IIGDGGFGTVYKAAL----PDGKTVAVKKLSQAKTQ--GHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 686 ~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
++|+|+||.|+.++. ..|..||.|+.++.... .......|..++...+ ||.+|++...+..+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 479999999998753 24778999988654321 1123456888888887 9999999999999999999999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+|++...+.... .+.+.....+...++-+++++| +.+++|||+|++||+++.+|++++.|||.++..-....
T Consensus 81 gg~lft~l~~~~----~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~- 152 (612)
T KOG0603|consen 81 GGDLFTRLSKEV----MFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI- 152 (612)
T ss_pred cchhhhccccCC----chHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhh-
Confidence 999988776543 4666777788889999999999 89999999999999999999999999999986543222
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccC
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (959)
.+||..|||||++. ....++|+||||++++||+||..||+. +. +....+. ..
T Consensus 153 ----~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~--------~~---~~~Il~~-----------~~ 204 (612)
T KOG0603|consen 153 ----ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG--------DT---MKRILKA-----------EL 204 (612)
T ss_pred ----cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch--------HH---HHHHhhh-----------cc
Confidence 18999999999988 567899999999999999999999975 11 1111111 11
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 002155 919 ADSKPMMLKMLRIAGDCLSDNPAMRPTM 946 (959)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rps~ 946 (959)
..+........+++.++...+|..|.-.
T Consensus 205 ~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 205 EMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred CCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 2234455556667777888899988754
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.9e-19 Score=182.84 Aligned_cols=194 Identities=20% Similarity=0.243 Sum_probs=135.2
Q ss_pred CCCceeccccceecC---------------------------CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHH
Q 002155 733 KHQNLVPLLGYCSFD---------------------------EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIA 785 (959)
Q Consensus 733 ~h~niv~~~~~~~~~---------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~ 785 (959)
+|||||++.++|.+. ...|+||.-.+. +|..++..+. .+...+.-++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~-----~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH-----RSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC-----CchHHHHHHH
Confidence 599999999877432 346899998865 9999997654 4556777899
Q ss_pred HHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC--CC--CcEEEccccccccccccc---ccc--cccccccccccCCCcCC
Q 002155 786 CGAARGLAFLHHGFTPHIIHRDIKASNILLN--EE--FEAKVADFGLARLISACE---THV--STDIAGTFGYIPPEYGQ 856 (959)
Q Consensus 786 ~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~--~~--~~~kl~Dfg~~~~~~~~~---~~~--~~~~~gt~~y~aPE~~~ 856 (959)
.|+++|+.||| .+||.|||+|++|||+. +| ....++|||.|-...... .+. ..+..|...-||||+..
T Consensus 348 aQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t 424 (598)
T KOG4158|consen 348 AQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT 424 (598)
T ss_pred HHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence 99999999999 89999999999999993 33 367899999884322111 011 11335788899999865
Q ss_pred CCCC------CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHH
Q 002155 857 SGRS------TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLR 930 (959)
Q Consensus 857 ~~~~------~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 930 (959)
..+- -.|+|.|+.|.+.||+++...||....+-. +......+..-|.. +..+...+.+
T Consensus 425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~------------L~~r~Yqe~qLPal----p~~vpp~~rq 488 (598)
T KOG4158|consen 425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML------------LDTRTYQESQLPAL----PSRVPPVARQ 488 (598)
T ss_pred cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhe------------echhhhhhhhCCCC----cccCChHHHH
Confidence 5432 358999999999999999999997622110 00000011111222 2233345667
Q ss_pred HHHHcccCCCCCCCCHHHHHH
Q 002155 931 IAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 931 li~~cl~~dP~~Rps~~ell~ 951 (959)
++...+++||.+|+++.-...
T Consensus 489 lV~~lL~r~pskRvsp~iAAN 509 (598)
T KOG4158|consen 489 LVFDLLKRDPSKRVSPNIAAN 509 (598)
T ss_pred HHHHHhcCCccccCCccHHHh
Confidence 788899999999998765443
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.9e-21 Score=173.48 Aligned_cols=180 Identities=33% Similarity=0.513 Sum_probs=114.3
Q ss_pred CCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCccccccc
Q 002155 339 RLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHL 418 (959)
Q Consensus 339 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 418 (959)
.+.+.+.|.||+|+++ ..|..+..+.+|+.|++++|+|+ ..|..++.+++|+.|+++-|++. +.|..|+.+|.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 4455555566666665 34445555555555555555555 44445555555555555555554 445555555555555
Q ss_pred ccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeecccc
Q 002155 419 DLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENK 498 (959)
Q Consensus 419 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 498 (959)
||++|.+. . ..+|..|..++.|+-|+|++|.
T Consensus 108 dltynnl~------------------------e-------------------------~~lpgnff~m~tlralyl~dnd 138 (264)
T KOG0617|consen 108 DLTYNNLN------------------------E-------------------------NSLPGNFFYMTTLRALYLGDND 138 (264)
T ss_pred hccccccc------------------------c-------------------------ccCCcchhHHHHHHHHHhcCCC
Confidence 55544443 1 1356666677777788888888
Q ss_pred ccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccC---CCccccccCCCCCC
Q 002155 499 FTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQ---NLSKISLTGNKDLC 572 (959)
Q Consensus 499 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~---~l~~l~l~~N~~~c 572 (959)
+. .+|+.++++++|+.|.+..|.+- ..|.+++.+..|++|++.+|+++-+||+.+.+. +-+....+.|||..
T Consensus 139 fe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~vlppel~~l~l~~~k~v~r~E~NPwv~ 213 (264)
T KOG0617|consen 139 FE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLTVLPPELANLDLVGNKQVMRMEENPWVN 213 (264)
T ss_pred cc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceeeecChhhhhhhhhhhHHHHhhhhCCCCC
Confidence 77 77888888888888888888776 578888888888888888888888888765542 33445677888864
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.6e-18 Score=201.85 Aligned_cols=196 Identities=23% Similarity=0.282 Sum_probs=158.1
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCC---CCceeccccceecCCceEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK---HQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv 753 (959)
..+.|.+.+.||+|+||+||+|...+|+.||+|+-+.....+. .=-.+++.+++ -+.|..+...+...+..++|
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEf---YI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv 772 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEF---YICLQVMERLKPQMLPSIMHISSAHVFQNASVLV 772 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceee---eehHHHHHhhchhhhcchHHHHHHHccCCcceee
Confidence 4678899999999999999999988899999999776543321 11122233333 34566666677778899999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-------CCcEEEccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE-------EFEAKVADF 826 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-------~~~~kl~Df 826 (959)
+||.+.|+|.+++... ..++|.-++.++.|+++.+++|| ..+||||||||+|+++.. ...++|+||
T Consensus 773 ~ey~~~Gtlld~~N~~----~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf 845 (974)
T KOG1166|consen 773 SEYSPYGTLLDLINTN----KVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDF 845 (974)
T ss_pred eeccccccHHHhhccC----CCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEEec
Confidence 9999999999999843 46899999999999999999999 899999999999999942 246999999
Q ss_pred ccccccccccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 002155 827 GLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882 (959)
Q Consensus 827 g~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p 882 (959)
|.+..+..-.. ......++|-.+-.+|...+.++++++|-|.++.+++-|+.|++-
T Consensus 846 G~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 846 GRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred ccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 99966532111 233455788899999999999999999999999999999999864
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.2e-20 Score=169.32 Aligned_cols=166 Identities=34% Similarity=0.540 Sum_probs=138.4
Q ss_pred ccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCC
Q 002155 312 ELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGL 391 (959)
Q Consensus 312 ~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 391 (959)
.+.++..++.|.|++|+++ .+|..++.+.+|+.|++++|+++ ..|..++.+++|+.|+++-|++. ..|..|+.++.|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 3456788999999999999 55667999999999999999999 67889999999999999999998 899999999999
Q ss_pred cEEEccCCcCCC-CCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceecc
Q 002155 392 VKLNLTGNKLSG-KVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNM 470 (959)
Q Consensus 392 ~~L~L~~N~i~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~l 470 (959)
+.|+|++|++.. ..|..|..++.|+-|+|++|.+. .+|..++.+++|+.|.+.+|.+-
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-------------------- 163 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-------------------- 163 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh--------------------
Confidence 999999999874 46888888888888888888887 77777788888877777777664
Q ss_pred CCcccCCCCCccccCccccceeeeccccccccCCcCCcC
Q 002155 471 SNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGN 509 (959)
Q Consensus 471 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 509 (959)
.+|..++.++.|++|.+.+|+++ .+|+.+++
T Consensus 164 -------~lpkeig~lt~lrelhiqgnrl~-vlppel~~ 194 (264)
T KOG0617|consen 164 -------SLPKEIGDLTRLRELHIQGNRLT-VLPPELAN 194 (264)
T ss_pred -------hCcHHHHHHHHHHHHhcccceee-ecChhhhh
Confidence 35666667777777777777776 66655544
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.3e-17 Score=165.79 Aligned_cols=135 Identities=16% Similarity=0.200 Sum_probs=104.7
Q ss_pred CCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcC-----CCCceeccccceecCC---ceE-EE
Q 002155 683 KTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKV-----KHQNLVPLLGYCSFDE---EKL-LV 753 (959)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~~---~~~-lv 753 (959)
-.+.||+|+||.||. ...++.. +||++........+.+.+|+.+++.+ .||||++++|++.++. ..+ +|
T Consensus 6 ~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 6 EQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred CcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 357899999999996 3334444 79988765444556789999999999 5799999999998763 333 78
Q ss_pred EEe--ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHH-HHHHhcCCCCeEeCCCCCCCEEECC----CCcEEEccc
Q 002155 754 YEY--MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGL-AFLHHGFTPHIIHRDIKASNILLNE----EFEAKVADF 826 (959)
Q Consensus 754 ~e~--~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~~~ivH~dlk~~Nill~~----~~~~kl~Df 826 (959)
||| +.+|+|.+++.+.. +++. ..++.+++.++ +||| +.+|+||||||+||+++. +++++|+||
T Consensus 84 ~e~~G~~~~tL~~~l~~~~-----~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQCR-----YEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred ecCCCCcchhHHHHHHccc-----ccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 999 55799999996532 4444 35677888777 9999 899999999999999974 348999994
Q ss_pred ccc
Q 002155 827 GLA 829 (959)
Q Consensus 827 g~~ 829 (959)
+-+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 434
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-19 Score=199.46 Aligned_cols=39 Identities=31% Similarity=0.387 Sum_probs=16.8
Q ss_pred ccccccccCCccccC----CCchhhhcccccceEeeccccccC
Q 002155 413 KELTHLDLSFNELDG----QLPSSLSNILNLVGLYLQHNKLSG 451 (959)
Q Consensus 413 ~~L~~L~L~~N~l~~----~~~~~l~~l~~L~~L~L~~N~l~~ 451 (959)
+.|++|++++|.+++ .+...+..+++|+.+++++|.++.
T Consensus 250 ~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~ 292 (319)
T cd00116 250 ISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGE 292 (319)
T ss_pred CCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcH
Confidence 344444444444431 112233334445555555555543
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.7e-19 Score=197.21 Aligned_cols=204 Identities=27% Similarity=0.270 Sum_probs=97.4
Q ss_pred EecCCCccc-ccCCcCccCCCCCcEEEcCCCcCCC----CCCcccCCCCCCcEEEccCccccc------cCCcccccCCC
Q 002155 47 LLLSSNQFI-GKIPPEIGNCSMLKSISLSNNFLSG----SIPRELCTSESLEEIDLDGNLLTG------TIEGVFEKCSN 115 (959)
Q Consensus 47 L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~------~~~~~~~~l~~ 115 (959)
|+|..+.+. ...+..+..+.+|++|++++|.++. .++..+...++|++|+++++.+.+ ..+..|..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 555555554 2344445556666666666666632 144445555666666666666552 12234555566
Q ss_pred CceeeecccccccccCcccCCC----cccEEeccCCccccccCcccccccceeEEEccccccccccCccccCC-cCCceE
Q 002155 116 LSQLVIFRNHIYGSIPEYLSKL----PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNA-AALERL 190 (959)
Q Consensus 116 L~~L~L~~n~~~~~~p~~~~~~----~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L 190 (959)
|++|++++|.+.+..+..+... +|++|++++|++.+.... .+...+..+ ++|++|
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~--------------------~l~~~l~~~~~~L~~L 142 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLR--------------------LLAKGLKDLPPALEKL 142 (319)
T ss_pred eeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHH--------------------HHHHHHHhCCCCceEE
Confidence 6666666665543333222221 155555555554421100 111223333 445555
Q ss_pred eccCCcccc----cCCccccCCCCCCEEEccCCcCCcc----CCccccCCCCCCEEEcccccCCCCC----chhhhcccC
Q 002155 191 VLTNNMLKG----HLPKEIGNLSALSVLDLNSNLFDGI----IPYELGDCISLTTLDLGNNNLSGLI----PEKIADLAQ 258 (959)
Q Consensus 191 ~L~~n~i~~----~~~~~~~~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~ 258 (959)
+|++|.+++ .++..+..+++|++|++++|.+++. ++..+..+++|++|+|++|.+++.. +..+..+++
T Consensus 143 ~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~ 222 (319)
T cd00116 143 VLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKS 222 (319)
T ss_pred EcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCC
Confidence 555555442 1222344445555555555555421 1222333445555555555554222 223344555
Q ss_pred CCeeEcccccCC
Q 002155 259 LQCLVLSHNNLS 270 (959)
Q Consensus 259 L~~L~Ls~N~l~ 270 (959)
|++|++++|.++
T Consensus 223 L~~L~ls~n~l~ 234 (319)
T cd00116 223 LEVLNLGDNNLT 234 (319)
T ss_pred CCEEecCCCcCc
Confidence 666666665544
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.70 E-value=6e-17 Score=167.36 Aligned_cols=142 Identities=16% Similarity=0.153 Sum_probs=109.6
Q ss_pred cCCCCCCeeccCCCeEEEEEE--cCCCCEEEEEEccccchh------------------------hHHHHHHHHHHHhcC
Q 002155 679 NNFCKTNIIGDGGFGTVYKAA--LPDGKTVAVKKLSQAKTQ------------------------GHREFTAEMETLGKV 732 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l 732 (959)
.-|.+.+.||+|+||.||+|. ..+|+.||+|+++..... ....+..|++.+.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357788999999999999998 568999999988643210 012356799999999
Q ss_pred CCCc--eeccccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC-eEeCCCC
Q 002155 733 KHQN--LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH-IIHRDIK 809 (959)
Q Consensus 733 ~h~n--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~dlk 809 (959)
.+.. +.+++++ ...++||||++++++..+..... .....++..++.|++.+++++| ..| ++|||||
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dik 176 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV----EPEEEEEFELYDDILEEMRKLY---KEGELVHGDLS 176 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCcccccccccC----CcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCC
Confidence 7533 3333332 34589999999988876542221 2455567889999999999999 889 9999999
Q ss_pred CCCEEECCCCcEEEccccccccc
Q 002155 810 ASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 810 ~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
|+||+++ +++++++|||.+...
T Consensus 177 p~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 177 EYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hhhEEEE-CCCEEEEEChhhhcc
Confidence 9999999 889999999998654
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.7e-17 Score=188.61 Aligned_cols=210 Identities=23% Similarity=0.351 Sum_probs=140.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC-CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
-++|+.++.|..|+||.||.++++. .+.+|+| +.+..-- .+. ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~li----lRn---ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLI----LRN---ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccchh----hhc---cccccCCccee------------------
Confidence 3678899999999999999998864 6678884 3321110 001 22222333333
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc-
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC- 835 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~- 835 (959)
||=.+.+...+ +++.. ++.+++|+| +.||||||+||+|.+|+.-|++|++|||+++.....
T Consensus 136 ---gDc~tllk~~g----~lPvd--------mvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~ 197 (1205)
T KOG0606|consen 136 ---GDCATLLKNIG----PLPVD--------MVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSL 197 (1205)
T ss_pred ---chhhhhcccCC----CCcch--------hhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhc
Confidence 33334443322 22221 278899999 899999999999999999999999999998653210
Q ss_pred -------------cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 836 -------------ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 836 -------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
........+||+.|+|||++..+.|+..+|+|++|+|+||.+.|+.||..+.++ ++...+...
T Consensus 198 atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe----elfg~visd 273 (1205)
T KOG0606|consen 198 ATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE----ELFGQVISD 273 (1205)
T ss_pred cchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH----HHHhhhhhh
Confidence 001122347999999999999999999999999999999999999999765322 122111111
Q ss_pred hhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 002155 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM 946 (959)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 946 (959)
.. .+.. .......+..+++.+.++.+|.+|--.
T Consensus 274 ~i-----~wpE------~dea~p~Ea~dli~~LL~qnp~~Rlgt 306 (1205)
T KOG0606|consen 274 DI-----EWPE------EDEALPPEAQDLIEQLLRQNPLCRLGT 306 (1205)
T ss_pred hc-----cccc------cCcCCCHHHHHHHHHHHHhChHhhccc
Confidence 10 0111 112223356677888899999999633
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-17 Score=179.43 Aligned_cols=175 Identities=25% Similarity=0.373 Sum_probs=129.7
Q ss_pred CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccc
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFG 827 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 827 (959)
.+.|+.|++|...+|.+|+..+.. ....++.....++.|++.|++| ++.+|+|+||.||+...+..+||.|||
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~-~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFg 401 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRT-GEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFG 401 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCc-ccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhh
Confidence 357899999999999999975542 3456788889999999999999 578999999999999999999999999
Q ss_pred ccccccccc-----ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHH
Q 002155 828 LARLISACE-----THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 828 ~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
+........ ....+...||..||+||.+.+..|+.++||||+|++++|+++ =..++... ....
T Consensus 402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~-----------~t~~ 470 (516)
T KOG1033|consen 402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI-----------ATLT 470 (516)
T ss_pred heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH-----------Hhhh
Confidence 998765443 223445689999999999999999999999999999999998 22222110 0111
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHV 949 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el 949 (959)
.++.+. ++|.....++ .=..++.+++.+.|.+||++.+.
T Consensus 471 d~r~g~----ip~~~~~d~p-----~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 471 DIRDGI----IPPEFLQDYP-----EEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hhhcCC----CChHHhhcCc-----HHHHHHHHhcCCCcccCchHHHH
Confidence 122211 1111111111 22467889999999999955443
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.3e-16 Score=160.04 Aligned_cols=144 Identities=19% Similarity=0.165 Sum_probs=111.2
Q ss_pred HHHHHhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchh----------------------hHHHHHHHHHHHh
Q 002155 673 HILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQ----------------------GHREFTAEMETLG 730 (959)
Q Consensus 673 ~~~~~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~e~~~l~ 730 (959)
++......|.+.+.||+|+||.||+|..++|+.||||++...... .......|+..+.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 333444457788999999999999999888999999986532200 1123567888888
Q ss_pred cCCCCc--eeccccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCC
Q 002155 731 KVKHQN--LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDI 808 (959)
Q Consensus 731 ~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl 808 (959)
.+.|++ +...++ ....++||||++|+++...... .....++.+++.++.++| ..|++||||
T Consensus 89 ~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl 151 (198)
T cd05144 89 ALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAY---KHGIIHGDL 151 (198)
T ss_pred HHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHH---HCCCCcCCC
Confidence 887774 334433 2456899999999998765321 234578899999999999 899999999
Q ss_pred CCCCEEECCCCcEEEcccccccccc
Q 002155 809 KASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 809 k~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
||+||++++++.++|+|||.+....
T Consensus 152 ~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 152 SEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CcccEEEcCCCcEEEEECCccccCC
Confidence 9999999999999999999996554
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.6e-16 Score=160.80 Aligned_cols=134 Identities=20% Similarity=0.288 Sum_probs=112.7
Q ss_pred CeeccCCCeEEEEEEcCCCCEEEEEEccccch--------hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKT--------QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
+.||+|++|.||+|++ .|..+++|+...... .....+.+|++++..++|+++.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 678899997653221 1123567899999999999988777777777888999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
++|++|.+++.... + .+..++.+++.++.++| ..|++|||++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~-------~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG-------M-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc-------H-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986532 1 77899999999999999 89999999999999999 78999999998854
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.7e-16 Score=155.93 Aligned_cols=130 Identities=20% Similarity=0.300 Sum_probs=106.4
Q ss_pred eeccCCCeEEEEEEcCCCCEEEEEEccccc--------hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 686 IIGDGGFGTVYKAALPDGKTVAVKKLSQAK--------TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 686 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.||+|+||.||+|.+ +|..+++|+..... ......+.+|+++++.++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999996 57889999854321 111245678999999999887665555566667789999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+|++|.+++.... . .++.+++.++.++| +.|++|||++|+||+++ ++.++++|||.+..
T Consensus 80 ~g~~l~~~~~~~~----~-------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGN----D-------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcH----H-------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999998875432 0 78999999999999 89999999999999999 78999999999864
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-15 Score=179.03 Aligned_cols=137 Identities=21% Similarity=0.279 Sum_probs=110.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEc-ccc-c------hhhHHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKL-SQA-K------TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~-~~~-~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
...|...+.||+|+||.||+|.+.+. .+++|+. .+. . ....+.+.+|+++++.++|++++....++.....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 34456688999999999999987543 3444432 211 1 1123457889999999999999887777777778
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.++||||+++++|.+++. ....++.++++++.||| +.|++|||+||+||++ .++.++++|||++
T Consensus 411 ~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred CEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCccc
Confidence 899999999999998875 23578999999999999 8999999999999999 6779999999998
Q ss_pred cc
Q 002155 830 RL 831 (959)
Q Consensus 830 ~~ 831 (959)
+.
T Consensus 475 ~~ 476 (535)
T PRK09605 475 KY 476 (535)
T ss_pred cc
Confidence 64
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.2e-14 Score=140.98 Aligned_cols=134 Identities=20% Similarity=0.184 Sum_probs=111.9
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCC--CceeccccceecCCceEEEEEeccCCC
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKH--QNLVPLLGYCSFDEEKLLVYEYMVNGS 761 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~g~ 761 (959)
.+.||+|.++.||+++..+ ..+++|....... ...+.+|+..++.++| .+++++++++...+..+++|||++++.
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 5679999999999999854 7899999865433 4568899999999976 588888888877788999999999877
Q ss_pred HHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 762 LDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 762 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+..+ +......++.+++++++++|.....+++|||++|+||+++..+.++++|||.+..
T Consensus 80 ~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 80 LDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 7543 3456677899999999999943335899999999999999989999999999864
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.4e-14 Score=145.70 Aligned_cols=136 Identities=21% Similarity=0.250 Sum_probs=96.7
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhh--HHH----------------------HHHHHHHHhcCCCCc--e
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQG--HRE----------------------FTAEMETLGKVKHQN--L 737 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~e~~~l~~l~h~n--i 737 (959)
.+.||+|+||.||+|...+|+.||||++....... ... ...|...+..+.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998889999999876432111 111 124555555554332 3
Q ss_pred eccccceecCCceEEEEEeccCCCHHH-HHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEE
Q 002155 738 VPLLGYCSFDEEKLLVYEYMVNGSLDL-WLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT-PHIIHRDIKASNILL 815 (959)
Q Consensus 738 v~~~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlk~~Nill 815 (959)
.+.+++ ...++||||++++.+.. .+.... .. .++..++.+++.++.++| . .+++|||+||+||++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-----~~-~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nili 148 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-----LL-EDPEELYDQILELMRKLY---REAGLVHGDLSEYNILV 148 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh-----hc-ccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEEE
Confidence 333322 34689999999955422 111111 01 567789999999999999 6 899999999999999
Q ss_pred CCCCcEEEcccccccccc
Q 002155 816 NEEFEAKVADFGLARLIS 833 (959)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~ 833 (959)
+ ++.++++|||.+....
T Consensus 149 ~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 149 D-DGKVYIIDVPQAVEID 165 (187)
T ss_pred E-CCcEEEEECccccccc
Confidence 9 8899999999996543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.51 E-value=9.6e-14 Score=143.90 Aligned_cols=136 Identities=19% Similarity=0.227 Sum_probs=104.3
Q ss_pred CCeec-cCCCeEEEEEEcCCCCEEEEEEccccc-------------hhhHHHHHHHHHHHhcCCCCce--eccccceecC
Q 002155 684 TNIIG-DGGFGTVYKAALPDGKTVAVKKLSQAK-------------TQGHREFTAEMETLGKVKHQNL--VPLLGYCSFD 747 (959)
Q Consensus 684 ~~~lg-~G~~g~V~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~~ 747 (959)
...|| .|+.|+||.+... +..+|||.+.... ......+.+|++++..++|+++ ++.+++...+
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 45788 8999999999874 7789998774210 1223457789999999998875 5666654332
Q ss_pred C----ceEEEEEeccC-CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEE
Q 002155 748 E----EKLLVYEYMVN-GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAK 822 (959)
Q Consensus 748 ~----~~~lv~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 822 (959)
. ..++||||++| .+|.+++... .++.. .+.+++.++.++| ..||+||||||.|||++.++.++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~-----~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA-----PLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC-----CCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEE
Confidence 2 23599999997 6998888642 23332 3568999999999 89999999999999999999999
Q ss_pred Eccccccccc
Q 002155 823 VADFGLARLI 832 (959)
Q Consensus 823 l~Dfg~~~~~ 832 (959)
|+|||.+...
T Consensus 183 LIDfg~~~~~ 192 (239)
T PRK01723 183 LIDFDRGELR 192 (239)
T ss_pred EEECCCcccC
Confidence 9999998653
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=6.5e-14 Score=165.48 Aligned_cols=118 Identities=33% Similarity=0.527 Sum_probs=107.3
Q ss_pred hhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecc
Q 002155 464 KIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLA 543 (959)
Q Consensus 464 ~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 543 (959)
.+..|+|++|.+.+.+|..++.+++|+.|+|++|++++.+|..++.+++|+.|||++|++++.+|+.+..+++|++|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCcccCCCCcc--cCCCccccccCCCCCCCCCCCCCcc
Q 002155 544 ENRLEGMVPRSGI--CQNLSKISLTGNKDLCGKIIGSNCQ 581 (959)
Q Consensus 544 ~N~l~~~~~~~~~--~~~l~~l~l~~N~~~c~~~~~~~c~ 581 (959)
+|++++.+|.... ...+..+++.+|+.+|+.+.-..|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCCCCCCc
Confidence 9999998886522 2456788999999999987656775
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-14 Score=168.92 Aligned_cols=253 Identities=25% Similarity=0.294 Sum_probs=183.7
Q ss_pred CCCCCCeeccCCCeEEEEEEcCC--CCEEEEEEccccc--hhhHHHHHHHHHHHhcCC-CCceeccccceecCCceEEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALPD--GKTVAVKKLSQAK--TQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 754 (959)
.|...+.||+|+|+.|-.+.... ...+|+|.+.... .........|..+-..+. |+|++++++.....+..++++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 45667779999999998887543 3456666665432 223344556777777776 999999999999999999999
Q ss_pred EeccCCCHHHHH-hhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC-cEEEccccccccc
Q 002155 755 EYMVNGSLDLWL-RNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF-EAKVADFGLARLI 832 (959)
Q Consensus 755 e~~~~g~L~~~l-~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~ 832 (959)
+|..++++.+-+ .... ...+...+-.++.|+..++.|+|. ..++.|||+||+|.+++..+ ..+++|||+|..+
T Consensus 101 ~~s~g~~~f~~i~~~~~---~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDS---TGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred CcccccccccccccCCc---cCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 999999998877 3322 124445677899999999999995 57899999999999999999 9999999999887
Q ss_pred cc--ccccccccccc-cccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 833 SA--CETHVSTDIAG-TFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 833 ~~--~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
.. .........+| ++.|+|||...+. ......|+||.|+++.-+++|..|+...... ......|......
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~--~~~~~~~~~~~~~---- 249 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRK--DGRYSSWKSNKGR---- 249 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccc--cccceeecccccc----
Confidence 65 22233344567 9999999998874 4467889999999999999999998654322 1222222211100
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVL 950 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell 950 (959)
.. ............++..+++..+|+.|.+.+++.
T Consensus 250 -----~~--~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 250 -----FT--QLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred -----cc--cCccccCChhhhhcccccccCCchhcccccccc
Confidence 00 011122223455677778889999999988764
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.2e-15 Score=157.82 Aligned_cols=202 Identities=30% Similarity=0.411 Sum_probs=148.9
Q ss_pred EEecCCCcccccCCc--CccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecc
Q 002155 46 SLLLSSNQFIGKIPP--EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFR 123 (959)
Q Consensus 46 ~L~L~~n~l~~~~~~--~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 123 (959)
.|.|++-++. ..|. .=..++--...||+.|++. .+|..++.+..|+.+.|.+|.+. .+|.++.++..|++|+|+.
T Consensus 54 ~l~Ls~rrlk-~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~ 130 (722)
T KOG0532|consen 54 RLLLSGRRLK-EFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSS 130 (722)
T ss_pred ccccccchhh-cCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhcc
Confidence 4666666665 3332 2245666788899999998 88999999999999999999998 6778889999999999999
Q ss_pred cccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCc
Q 002155 124 NHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPK 203 (959)
Q Consensus 124 n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~ 203 (959)
|++. ..|..+..++|++|-+++|+++ .+|..++....|.+|+.+.|.+. .+|..++++.+|+.|.+..|++. .+|+
T Consensus 131 NqlS-~lp~~lC~lpLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~ 206 (722)
T KOG0532|consen 131 NQLS-HLPDGLCDLPLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPE 206 (722)
T ss_pred chhh-cCChhhhcCcceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCH
Confidence 9987 7788888999999999999998 55666666677777777777776 66666777777777777777776 4566
Q ss_pred cccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhccc
Q 002155 204 EIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLA 257 (959)
Q Consensus 204 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 257 (959)
.++.| .|..||+|.|+|. .+|-.|.+|+.|++|.|.+|.+. ..|..++...
T Consensus 207 El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kG 257 (722)
T KOG0532|consen 207 ELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKG 257 (722)
T ss_pred HHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhcc
Confidence 66644 4666777777776 56666777777777777777666 3355554433
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.2e-13 Score=149.49 Aligned_cols=142 Identities=22% Similarity=0.229 Sum_probs=100.3
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhH----------------------------------------HHHH
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGH----------------------------------------REFT 723 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~ 723 (959)
.+.||.|++|.||+|++++|+.||||+.+....... -+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 367999999999999999999999999764311100 0244
Q ss_pred HHHHHHhcCC----CCceeccccce-ecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHH-HHHHHHh
Q 002155 724 AEMETLGKVK----HQNLVPLLGYC-SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAAR-GLAFLHH 797 (959)
Q Consensus 724 ~e~~~l~~l~----h~niv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~-~l~~LH~ 797 (959)
.|.+.+.+++ |.+-+.+-.++ ...+..++||||++|+++.++....... . .+..++..++. .+..+|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~---~---~~~~ia~~~~~~~l~ql~- 274 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG---L---DRKALAENLARSFLNQVL- 274 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC---C---CHHHHHHHHHHHHHHHHH-
Confidence 4555555552 32223332222 2345679999999999998877543211 1 23456666665 467788
Q ss_pred cCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 798 ~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
..|++|+|++|.||+++.+++++++|||++.....
T Consensus 275 --~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 275 --RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred --hCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 78999999999999999999999999999977653
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.7e-14 Score=155.04 Aligned_cols=187 Identities=29% Similarity=0.398 Sum_probs=118.7
Q ss_pred CccccCCCCCcCccccCccchhhhhhcCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCC
Q 002155 1 MLSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSG 80 (959)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 80 (959)
+||-|.|. .+|++...+-.|..+..+.|=+-.+|.++++++.|++|||+.|++. .+|..+..|+ |+.|-+++|+++
T Consensus 81 DlsrNR~~-elp~~~~~f~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~- 156 (722)
T KOG0532|consen 81 DLSRNRFS-ELPEEACAFVSLESLILYHNCIRTIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT- 156 (722)
T ss_pred hccccccc-cCchHHHHHHHHHHHHHHhccceecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-
Confidence 35666666 6777776666666666666666667777777777777777777766 5666666665 667777777776
Q ss_pred CCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCcccccc
Q 002155 81 SIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNS 160 (959)
Q Consensus 81 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~ 160 (959)
.+|+.++.+..|..||.+.|.+. ..|..++.+.+|+.|.+..|++.. +|..+..++|..||+|.|+++
T Consensus 157 ~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~-lp~El~~LpLi~lDfScNkis---------- 224 (722)
T KOG0532|consen 157 SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLED-LPEELCSLPLIRLDFSCNKIS---------- 224 (722)
T ss_pred cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhh-CCHHHhCCceeeeecccCcee----------
Confidence 66666666666777777777666 345556666666666666666653 333333666666666666665
Q ss_pred cceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCC---CCEEEccCC
Q 002155 161 ETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSA---LSVLDLNSN 219 (959)
Q Consensus 161 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~---L~~L~L~~N 219 (959)
.+|-+|.+|+.|++|-|.+|.++ ..|..++.... -++|+..-+
T Consensus 225 ---------------~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 225 ---------------YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred ---------------ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 55666667777777777777777 45555543332 244444444
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.3e-13 Score=151.34 Aligned_cols=195 Identities=32% Similarity=0.442 Sum_probs=108.3
Q ss_pred EecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCC-CCcEEEccCccccccCCcccccCCCCceeeecccc
Q 002155 47 LLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSE-SLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNH 125 (959)
Q Consensus 47 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 125 (959)
+++..|.+. ..+..+..++.++.|++.+|+++ .+|.....++ +|+.|++++|++.. .+..+..+++|+
T Consensus 98 l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~~-l~~~~~~l~~L~-------- 166 (394)
T COG4886 98 LDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIES-LPSPLRNLPNLK-------- 166 (394)
T ss_pred eeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchhh-hhhhhhcccccc--------
Confidence 444444443 22223444444555555555554 3343344442 45555555555542 223334444444
Q ss_pred cccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccc
Q 002155 126 IYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEI 205 (959)
Q Consensus 126 ~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~ 205 (959)
.|++++|+++. +|...+..+.|+.|++++|++. .+|...+.+..|++|.+++|.+. ..+..+
T Consensus 167 ---------------~L~l~~N~l~~-l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~ 228 (394)
T COG4886 167 ---------------NLDLSFNDLSD-LPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSL 228 (394)
T ss_pred ---------------ccccCCchhhh-hhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhh
Confidence 45555555542 3333335555666666666665 55555555566777777777544 355666
Q ss_pred cCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCC
Q 002155 206 GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPI 273 (959)
Q Consensus 206 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 273 (959)
.+++++..|.+.+|++. ..+..++.++++++|++++|+++.+.. ++.+.+|+.|++++|.+....
T Consensus 229 ~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~ 293 (394)
T COG4886 229 SNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNAL 293 (394)
T ss_pred hhcccccccccCCceee-eccchhccccccceecccccccccccc--ccccCccCEEeccCccccccc
Confidence 77777777777777766 335566677777777777777775433 677777777777777765433
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.39 E-value=9.5e-13 Score=132.57 Aligned_cols=211 Identities=20% Similarity=0.276 Sum_probs=145.5
Q ss_pred HHHHHhcCCCCceeccccceecCC-----ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC
Q 002155 725 EMETLGKVKHQNLVPLLGYCSFDE-----EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF 799 (959)
Q Consensus 725 e~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ 799 (959)
-+.-+-++.|.|+|+++.|+.+.. ...++.||++-|++..++++.......+....-.+|.-||..||.|||..
T Consensus 117 vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~- 195 (458)
T KOG1266|consen 117 VFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC- 195 (458)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-
Confidence 344555667999999999986543 46789999999999999988765555667777778999999999999965
Q ss_pred CCCeEeCCCCCCCEEECCCCcEEEccccccccc---ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHH
Q 002155 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLI---SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLEL 876 (959)
Q Consensus 800 ~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~---~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el 876 (959)
.+.|+|+++.-+-|++..+|-+|+.----.... ..........-.+-++|.|||+-.....+.++|||+||+...||
T Consensus 196 ~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem 275 (458)
T KOG1266|consen 196 DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM 275 (458)
T ss_pred CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence 899999999999999999988887532111100 00011111122467899999997777788899999999999999
Q ss_pred HhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 877 VTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 877 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
-.+..-....-.......-...+... ..+ . .=...+.+|++..|..||+|.+++.+.-.+
T Consensus 276 ailEiq~tnseS~~~~ee~ia~~i~~--------len-------~-----lqr~~i~kcl~~eP~~rp~ar~llfHpllf 335 (458)
T KOG1266|consen 276 AILEIQSTNSESKVEVEENIANVIIG--------LEN-------G-----LQRGSITKCLEGEPNGRPDARLLLFHPLLF 335 (458)
T ss_pred HHheeccCCCcceeehhhhhhhheee--------ccC-------c-----cccCcCcccccCCCCCCcchhhhhcCceee
Confidence 88765422211111100000000000 000 0 012456779999999999999998775443
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.3e-12 Score=148.12 Aligned_cols=179 Identities=34% Similarity=0.479 Sum_probs=90.2
Q ss_pred cceeEEEccccccccccCccccCCc-CCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEE
Q 002155 161 ETLMEFSAANNLLEGSLPYEVGNAA-ALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLD 239 (959)
Q Consensus 161 ~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 239 (959)
+.+..|++.+|.++ .++.....+. +|+.|++++|.+. .+|..+..+++|+.|++++|.+. .+|...+.+++|+.|+
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLD 192 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhee
Confidence 44445555555444 3343444442 5555555555555 34444555555555555555555 3333333455555555
Q ss_pred cccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccc
Q 002155 240 LGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVV 319 (959)
Q Consensus 240 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L 319 (959)
+++|+++.+ |........|++|.+++|.+. ..+..+..+..+
T Consensus 193 ls~N~i~~l-~~~~~~~~~L~~l~~~~N~~~-------------------------------------~~~~~~~~~~~l 234 (394)
T COG4886 193 LSGNKISDL-PPEIELLSALEELDLSNNSII-------------------------------------ELLSSLSNLKNL 234 (394)
T ss_pred ccCCccccC-chhhhhhhhhhhhhhcCCcce-------------------------------------ecchhhhhcccc
Confidence 555555532 333334444555555555311 223334444444
Q ss_pred cEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCcccc
Q 002155 320 VDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPW 383 (959)
Q Consensus 320 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 383 (959)
..+.+.+|++.. .+..+..++++++|++++|+++.+.+ +..+.+++.|++++|.+....+.
T Consensus 235 ~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 235 SGLELSNNKLED-LPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred cccccCCceeee-ccchhccccccceecccccccccccc--ccccCccCEEeccCccccccchh
Confidence 444455555442 24455556666666666666664332 55666666666666666544443
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=2e-11 Score=135.72 Aligned_cols=228 Identities=18% Similarity=0.214 Sum_probs=153.9
Q ss_pred cCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHH
Q 002155 700 LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWD 779 (959)
Q Consensus 700 ~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~ 779 (959)
..++.+|.|++.+...........+-++-++.++||+|+++++.+..++..|+|+|-+. .|..++.... ..
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~-------~~ 104 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG-------KE 104 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH-------HH
Confidence 34688888888765554444556778899999999999999999999999999999885 4777776543 35
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccccccccccccccCCCcCCCCC
Q 002155 780 KRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGR 859 (959)
Q Consensus 780 ~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 859 (959)
.....+.||+.||.|||+ +.+++|++|.-+.|++++.|+.||++|.++.....-.. ......--..|..|+.+....
T Consensus 105 ~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~ 181 (690)
T KOG1243|consen 105 EVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE 181 (690)
T ss_pred HHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc
Confidence 666788999999999986 67899999999999999999999999998865432111 111112223577777655433
Q ss_pred CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchH----HHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHc
Q 002155 860 STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLV----GWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDC 935 (959)
Q Consensus 860 ~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 935 (959)
...|.|.|||++||++.|..+-.. +-.....+. ....+.+.... ..+ . ...+++..|
T Consensus 182 --~s~D~~~Lg~li~el~ng~~~~~~--~~~~~~~ipk~~~~~~~k~~~~~~---~~r-----------~-n~~~~~~~~ 242 (690)
T KOG1243|consen 182 --WSIDSWGLGCLIEELFNGSLLTKT--DLSNTGKIPKALIELYCKKLGATE---LKR-----------P-NKLRFILEC 242 (690)
T ss_pred --cchhhhhHHHHHHHHhCcccCcch--hhhccCccchhHHHHHHHHhcccc---ccc-----------c-chhhHHHHH
Confidence 457999999999999999332111 100000111 00001111000 000 0 134556667
Q ss_pred ccCCCCCCCCHHHHHHHHHhhhc
Q 002155 936 LSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 936 l~~dP~~Rps~~ell~~L~~l~~ 958 (959)
....+--|-.+-+++..|++++.
T Consensus 243 ~~~~gff~n~fvd~~~fLeel~l 265 (690)
T KOG1243|consen 243 RLLGGFFRNDFVDTLLFLEELRL 265 (690)
T ss_pred HhccccccchHHHHHHHHHhccc
Confidence 77777777778888888877764
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.6e-12 Score=143.45 Aligned_cols=247 Identities=21% Similarity=0.265 Sum_probs=176.5
Q ss_pred CCCCCCeecc--CCCeEEEEEEc--C-CCCEEEEEEccccch--hhHHHHHHHHHHHhcCC-CCceeccccceecCCceE
Q 002155 680 NFCKTNIIGD--GGFGTVYKAAL--P-DGKTVAVKKLSQAKT--QGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 680 ~f~~~~~lg~--G~~g~V~~~~~--~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 751 (959)
.|...+.+|. |.+|.||.+.. + ++..+|+|+-+..-. .....=.+|+.....++ |++.++.+..+...+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 3556778999 99999999986 3 688899997432222 22222234666555664 899999888999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHH----HHHHHHhcCCCCeEeCCCCCCCEEECCC-CcEEEccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAAR----GLAFLHHGFTPHIIHRDIKASNILLNEE-FEAKVADF 826 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Df 826 (959)
+-+|++. .++.++.+... ..++....+.+..+..+ |+.++| ..+++|-|+||.||+...+ ...+++||
T Consensus 195 iqtE~~~-~sl~~~~~~~~---~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPC---NFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeecccc-chhHHhhhccc---ccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecCCc
Confidence 9999985 68888776654 23566777888888888 999999 8999999999999999999 88999999
Q ss_pred ccccccccccccc----cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 827 GLARLISACETHV----STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 827 g~~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
|+...+....... .....|...|++||+.. +.++.++|+|++|.++.+..++..+....... . +.+
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~-------~--W~~ 337 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNS-------S--WSQ 337 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCC-------C--ccc
Confidence 9998876533111 11225778999999976 46788999999999999999988775432111 1 111
Q ss_pred hhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
.+.... + .........++...+.+|++.+|..|++++.+..
T Consensus 338 ~r~~~i-----p---~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 338 LRQGYI-----P---LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred cccccC-----c---hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 111110 0 0111111223334778899999999999888754
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.3e-12 Score=145.27 Aligned_cols=145 Identities=17% Similarity=0.211 Sum_probs=93.8
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCC-CCEEEEEEccccchh----------------------------------hHH---
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQ----------------------------------GHR--- 720 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~----------------------------------~~~--- 720 (959)
..|+. +.||+|++|.||+|++++ |+.||||+.+..... ..+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 34665 789999999999999987 999999998643110 001
Q ss_pred ---HHHHHHHHHhcCC----CCceecccccee-cCCceEEEEEeccCCCHHHHH--hhhcCCccccCHHHHHHHHHHHHH
Q 002155 721 ---EFTAEMETLGKVK----HQNLVPLLGYCS-FDEEKLLVYEYMVNGSLDLWL--RNRTGSLEVLGWDKRYKIACGAAR 790 (959)
Q Consensus 721 ---~~~~e~~~l~~l~----h~niv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~l~~~~~~~i~~~i~~ 790 (959)
++.+|+..+.+++ +...+.+-.++. .....++||||++|+.+.++- ...+.....+....+..++.|
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q--- 275 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ--- 275 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH---
Confidence 1333444444442 333333333332 245678999999999998753 222111111222222223333
Q ss_pred HHHHHHhcCCCCeEeCCCCCCCEEECCCC----cEEEccccccccccc
Q 002155 791 GLAFLHHGFTPHIIHRDIKASNILLNEEF----EAKVADFGLARLISA 834 (959)
Q Consensus 791 ~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg~~~~~~~ 834 (959)
+. ..|++|+|+||.||+++.++ ++++.|||++...+.
T Consensus 276 ----if---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 276 ----VF---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ----HH---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 33 67999999999999999888 999999999987653
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.22 E-value=3e-11 Score=119.49 Aligned_cols=127 Identities=17% Similarity=0.118 Sum_probs=95.3
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCcee-ccccceecCCceEEEEEeccCCCH
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLV-PLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
.+.++.|.++.||+++.. ++.|++|....... ....+..|+.+++.+.+.+++ +++++ .....++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCCcc
Confidence 456899999999999874 77899998764432 223467899999988665544 34433 23446899999999887
Q ss_pred HHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 763 DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH-----IIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 763 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
.+. . .....++.+++++++.|| ..+ ++|||++|.||+++ ++.++++|||.+.
T Consensus 79 ~~~----~--------~~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 79 LTE----D--------FSDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ccc----c--------ccCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 543 0 011345678999999999 555 59999999999999 6689999999885
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.4e-12 Score=127.70 Aligned_cols=210 Identities=23% Similarity=0.251 Sum_probs=143.1
Q ss_pred ccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecC-
Q 002155 223 GIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLS- 301 (959)
Q Consensus 223 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~- 301 (959)
..+|..+.-+++|.++.+|++.-..+ .+.-..-+.|+.+.....-++....-.|... ..|..
T Consensus 204 ~~l~f~l~~f~~l~~~~~s~~~~~~i-~~~~~~kptl~t~~v~~s~~~~~~~l~pe~~----------------~~D~~~ 266 (490)
T KOG1259|consen 204 NRLSFNLNAFRNLKTLKFSALSTENI-VDIELLKPTLQTICVHNTTIQDVPSLLPETI----------------LADPSG 266 (490)
T ss_pred cccccchHHhhhhheeeeeccchhhe-eceeecCchhheeeeecccccccccccchhh----------------hcCccC
Confidence 34444455556677777766643322 2222333566666665544432111111110 01111
Q ss_pred --CCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCC
Q 002155 302 --YNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTG 379 (959)
Q Consensus 302 --~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 379 (959)
.....|.....+..+..|++++|++|.|+ .+..+..-+|.++.|++|+|.|..+ +.+..+++|+.|||++|.++
T Consensus 267 ~E~~t~~G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls- 342 (490)
T KOG1259|consen 267 SEPSTSNGSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA- 342 (490)
T ss_pred CCCCccCCceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-
Confidence 11223444455556677888888888888 4566777889999999999999844 34888999999999999998
Q ss_pred ccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCC-chhhhcccccceEeeccccccCCccc
Q 002155 380 SIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQL-PSSLSNILNLVGLYLQHNKLSGPVDE 455 (959)
Q Consensus 380 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~l~~l~~L~~L~L~~N~l~~~~~~ 455 (959)
....+-..+.++++|.|++|.|... ..++.+-+|..||+++|+|.... -..++++|.|+.+.|.+|++.++++.
T Consensus 343 ~~~Gwh~KLGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vdY 417 (490)
T KOG1259|consen 343 ECVGWHLKLGNIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVDY 417 (490)
T ss_pred hhhhhHhhhcCEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccchH
Confidence 5566667888999999999999743 45777888999999999998432 25789999999999999999987653
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.1e-12 Score=146.34 Aligned_cols=244 Identities=28% Similarity=0.377 Sum_probs=150.0
Q ss_pred CCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCee
Q 002155 183 NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCL 262 (959)
Q Consensus 183 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 262 (959)
.+..++.++++.|.|. ..-..+..+++|+.|++.+|.|..+ ...+..+++|++|+|++|+|+.+ ..+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhh-hhhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccccc--cchhhccchhhh
Confidence 4455566666666666 2334466667777777777777632 22256677777777777777655 445666667777
Q ss_pred EcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCC-cccCCcccccEEEccCCcCcccCCccccCCC
Q 002155 263 VLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIP-EELGSCVVVVDLLLNNNMLSGKIPGSLSRLT 341 (959)
Q Consensus 263 ~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p-~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~ 341 (959)
++++|.|+ .+..+..+..|+.+++++|++....+ . ...+.+++.+++.+|.+..+ ..+..+.
T Consensus 146 ~l~~N~i~--------------~~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~ 208 (414)
T KOG0531|consen 146 NLSGNLIS--------------DISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLK 208 (414)
T ss_pred eeccCcch--------------hccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHH
Confidence 77777765 23344446666777777777764433 2 46677777788888887632 3445555
Q ss_pred CCCEEEccCCCCCCCCCCCcCCCC--cceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccc
Q 002155 342 NLTTLDLSRNQLTGPIPSEFGDSI--KLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLD 419 (959)
Q Consensus 342 ~L~~L~Ls~n~l~~~~~~~~~~l~--~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 419 (959)
.+..+++..|.++...+ +..+. .|+.+++++|++. ..+..+..+..+..|++.+|++... ..+...+.+..+.
T Consensus 209 ~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~ 283 (414)
T KOG0531|consen 209 KLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELW 283 (414)
T ss_pred HHHHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhc
Confidence 66666888888774322 22222 3778888888877 3335566677777778777777643 2344556677777
Q ss_pred cCCccccCC---Cch-hhhcccccceEeeccccccCC
Q 002155 420 LSFNELDGQ---LPS-SLSNILNLVGLYLQHNKLSGP 452 (959)
Q Consensus 420 L~~N~l~~~---~~~-~l~~l~~L~~L~L~~N~l~~~ 452 (959)
+..|.+... ... .....+.+..+++..|.+...
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (414)
T KOG0531|consen 284 LNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKI 320 (414)
T ss_pred cCcchhcchhhhhccccccccccccccccccCccccc
Confidence 777776521 111 134455666666666666543
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.1e-11 Score=133.37 Aligned_cols=248 Identities=18% Similarity=0.219 Sum_probs=173.8
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC--CCCEEEEEEccccchhhHHHH--HHHHHHHhcC-CCCceeccccceecCCceE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP--DGKTVAVKKLSQAKTQGHREF--TAEMETLGKV-KHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~--~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 751 (959)
...+|..+..||.|.|+.||++..+ ++..|++|...........++ ..|+.+...+ .|.++++++..+...+..|
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 3457888899999999999998643 678899998765433322222 2455555555 4889999888888888888
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC-CcEEEccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE-FEAKVADFGLAR 830 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~ 830 (959)
+--|||++++........ ..+++..++++..|++.++.++| ++.++|+|+||+||++..+ +..++.|||.++
T Consensus 343 ip~e~~~~~s~~l~~~~~----~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVTS----QMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred CchhhhcCcchhhhhHHH----HhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhcccccccc
Confidence 999999999998777332 35777889999999999999999 8999999999999999886 788999999986
Q ss_pred cccccccccccccccccccc--CCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 831 LISACETHVSTDIAGTFGYI--PPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
.+.- .. ....+..+++ +|+......+..+.|++|||.-+.|..++..-...... | ..++.+..
T Consensus 416 ~~~~---~~-~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---------~--~~i~~~~~ 480 (524)
T KOG0601|consen 416 RLAF---SS-GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---------S--LTIRSGDT 480 (524)
T ss_pred ccce---ec-ccccccccccccchhhccccccccccccccccccccccccCcccCccccc---------c--eeeecccc
Confidence 4321 11 1122334445 55556666778899999999999999998654321100 0 01111111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
. . .......+..+...+..+++..||.+.++..+.+-.
T Consensus 481 p-------~---~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 481 P-------N---LPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred c-------C---CCchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 0 0 111113444555668899999999999887665443
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.17 E-value=4e-12 Score=126.19 Aligned_cols=208 Identities=25% Similarity=0.231 Sum_probs=105.9
Q ss_pred CccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCC-cCCCCCCCccCCc
Q 002155 334 PGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGN-KLSGKVPTSFGNL 412 (959)
Q Consensus 334 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N-~i~~~~~~~~~~l 412 (959)
|-.+.-+.+|..+.+|.+.-.. +.+....-+.|+++.+.+..++. .| .+-....+....-+.- ...|..-.....+
T Consensus 207 ~f~l~~f~~l~~~~~s~~~~~~-i~~~~~~kptl~t~~v~~s~~~~-~~-~l~pe~~~~D~~~~E~~t~~G~~~~~~dTW 283 (490)
T KOG1259|consen 207 SFNLNAFRNLKTLKFSALSTEN-IVDIELLKPTLQTICVHNTTIQD-VP-SLLPETILADPSGSEPSTSNGSALVSADTW 283 (490)
T ss_pred ccchHHhhhhheeeeeccchhh-eeceeecCchhheeeeecccccc-cc-cccchhhhcCccCCCCCccCCceEEecchH
Confidence 3334445566666666655432 22222233556666666555441 11 1111111211111111 1111122223333
Q ss_pred ccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCcccccee
Q 002155 413 KELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNL 492 (959)
Q Consensus 413 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L 492 (959)
..|+++|||+|.|+ .+..+..-+|.++.|++++|.|..+.. .+. ..+++.||||+|.++ .+..+=..+-+.+.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v~n--La~--L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTVQN--LAE--LPQLQLLDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeeehh--hhh--cccceEeecccchhH-hhhhhHhhhcCEeee
Confidence 44555555555555 444555555555555555555554322 111 113444444444444 222333456677788
Q ss_pred eeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCC-ccccCCCCccEEecccCcCcccCC
Q 002155 493 DLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIP-ETMCSLSNLLYLSLAENRLEGMVP 552 (959)
Q Consensus 493 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~ 552 (959)
.|++|.+.. -..++.+-+|..||+++|+|..... ..++++|.|+.+.|.+|++.+++.
T Consensus 358 ~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 358 KLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred ehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 888887752 2346667778888888888764322 457788888888888888877654
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.5e-10 Score=109.59 Aligned_cols=136 Identities=14% Similarity=0.151 Sum_probs=97.4
Q ss_pred CeeccCCCeEEEEEEcCC-------CCEEEEEEcccc-------------c---------hhhHHHHH----HHHHHHhc
Q 002155 685 NIIGDGGFGTVYKAALPD-------GKTVAVKKLSQA-------------K---------TQGHREFT----AEMETLGK 731 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~-------------~---------~~~~~~~~----~e~~~l~~ 731 (959)
..||.|.-+.||.|...+ +..+|||+.+.. + ......+. +|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999998653 478999976421 0 11122333 79999998
Q ss_pred CCC--CceeccccceecCCceEEEEEeccCCCHH-HHHhhhcCCccccCHHHHHHHHHHHHHHHHHH-HhcCCCCeEeCC
Q 002155 732 VKH--QNLVPLLGYCSFDEEKLLVYEYMVNGSLD-LWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHGFTPHIIHRD 807 (959)
Q Consensus 732 l~h--~niv~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~d 807 (959)
+.. -++.+.+++ ...++||||+.++.+. ..+++. .++..+...+..+++.++..+ | ..|+||||
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~-----~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA-----KLNDEEMKNAYYQVLSMMKQLYK---ECNLVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc-----ccCHHHHHHHHHHHHHHHHHHHH---hCCeecCC
Confidence 854 345555543 5689999999775442 223221 234455667889999999999 7 78999999
Q ss_pred CCCCCEEECCCCcEEEcccccccccc
Q 002155 808 IKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 808 lk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
+++.||+++ ++.+.++|||.+....
T Consensus 151 Ls~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 151 LSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCHHHEEEE-CCcEEEEECCCceeCC
Confidence 999999997 4689999999986543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.1e-11 Score=130.00 Aligned_cols=163 Identities=21% Similarity=0.164 Sum_probs=89.8
Q ss_pred CCcCccCCCCCcEEEcCCCcCCCCCC--cccCCCCCCcEEEccCcccccc--CCcccccCCCCceeeecccccccccCcc
Q 002155 58 IPPEIGNCSMLKSISLSNNFLSGSIP--RELCTSESLEEIDLDGNLLTGT--IEGVFEKCSNLSQLVIFRNHIYGSIPEY 133 (959)
Q Consensus 58 ~~~~~~~l~~L~~L~Ls~n~l~~~~p--~~~~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~L~~n~~~~~~p~~ 133 (959)
+...=.+++.|++..|.++.+. .++ .....+++++.||||+|-+... ......++++|+.|+|+.|.+..-....
T Consensus 113 i~akQsn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~ 191 (505)
T KOG3207|consen 113 IAAKQSNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSN 191 (505)
T ss_pred HHHHhhhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCcccc
Confidence 3333456778888888888886 455 3566788888888888887743 3345678888888888888875322222
Q ss_pred cCC--CcccEEeccCCccccccC-cccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCC--ccccCC
Q 002155 134 LSK--LPLMVLDLDSNNFTGIIP-VSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLP--KEIGNL 208 (959)
Q Consensus 134 ~~~--~~L~~L~ls~n~l~~~~p-~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~--~~~~~l 208 (959)
... ..|+.|.|+.|.++...- ..+..+|+|+.|+|..|..-..-......+..|++|+|++|++-. .+ ...+.+
T Consensus 192 ~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l 270 (505)
T KOG3207|consen 192 TTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTL 270 (505)
T ss_pred chhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccc
Confidence 211 136677777777652111 112234555555555552221222233334445555555544441 22 233444
Q ss_pred CCCCEEEccCCcCC
Q 002155 209 SALSVLDLNSNLFD 222 (959)
Q Consensus 209 ~~L~~L~L~~N~i~ 222 (959)
+.|+.|+++.|.|.
T Consensus 271 ~~L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 271 PGLNQLNLSSTGIA 284 (505)
T ss_pred cchhhhhccccCcc
Confidence 44444444444443
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.7e-10 Score=136.70 Aligned_cols=112 Identities=30% Similarity=0.501 Sum_probs=84.0
Q ss_pred cceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeC
Q 002155 439 LVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDV 518 (959)
Q Consensus 439 L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 518 (959)
++.|+|++|.+++..+..+..+. +|+.|+|++|.+++.+|..++.+++|+.|+|++|++++.+|+.++++++|++|+|
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~--~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~L 497 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLR--HLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNL 497 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCC--CCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEEC
Confidence 34444444444444443333322 4445555555555677888889999999999999999999999999999999999
Q ss_pred CCCcCCCCCCccccCC-CCccEEecccCcCcccCC
Q 002155 519 SRNRLCGQIPETMCSL-SNLLYLSLAENRLEGMVP 552 (959)
Q Consensus 519 s~N~l~~~~p~~~~~l-~~L~~L~l~~N~l~~~~~ 552 (959)
++|+++|.+|..+..+ .++..+++.+|+..+-.|
T Consensus 498 s~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 498 NGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred cCCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 9999999999988764 567899999998665444
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.3e-11 Score=127.56 Aligned_cols=184 Identities=23% Similarity=0.225 Sum_probs=94.4
Q ss_pred cCCCCCCEEEccCCCCCCCCC--CCcCCCCcceEEEeeCcccCCccc--cccccCCCCcEEEccCCcCCCCCCCcc-CCc
Q 002155 338 SRLTNLTTLDLSRNQLTGPIP--SEFGDSIKLQGLYLGNNQLTGSIP--WSLGSLGGLVKLNLTGNKLSGKVPTSF-GNL 412 (959)
Q Consensus 338 ~~l~~L~~L~Ls~n~l~~~~~--~~~~~l~~L~~L~L~~n~l~~~~~--~~~~~l~~L~~L~L~~N~i~~~~~~~~-~~l 412 (959)
+++.+|+.+.|.+..... .+ .....+++++.|+|++|-+....+ .....+++|+.|+|+.|++........ ..+
T Consensus 118 sn~kkL~~IsLdn~~V~~-~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVED-AGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCccccc-cchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 345556666666665542 22 234456666666666666553222 223456667777777776653222211 135
Q ss_pred ccccccccCCccccC-CCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCC-CccccCccccc
Q 002155 413 KELTHLDLSFNELDG-QLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGL-PRSLGNLSYLT 490 (959)
Q Consensus 413 ~~L~~L~L~~N~l~~-~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~-p~~~~~l~~L~ 490 (959)
+.|+.|.|+.|.++. .+-..+..+|+|+.|+|..|....+ ..++.-....++.|||++|++.... -...+.++.|+
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~--~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~ 274 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILI--KATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLN 274 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccce--ecchhhhhhHHhhccccCCcccccccccccccccchh
Confidence 567777777777763 2233455677777777777752222 2222111224555555555544221 12345566666
Q ss_pred eeeeccccccccC-CcC-----CcCCCCCcEEeCCCCcCC
Q 002155 491 NLDLHENKFTGEI-PPD-----LGNLMQLEYLDVSRNRLC 524 (959)
Q Consensus 491 ~L~Ls~N~l~~~~-p~~-----~~~l~~L~~L~Ls~N~l~ 524 (959)
.|+++.+.+...- |+. ...+++|++|+++.|+|.
T Consensus 275 ~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 275 QLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred hhhccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 6666666555311 111 134555666666666554
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.6e-12 Score=131.13 Aligned_cols=39 Identities=21% Similarity=0.332 Sum_probs=21.4
Q ss_pred cccCCcCCceEeccCCccccc----CCccccCCCCCCEEEccC
Q 002155 180 EVGNAAALERLVLTNNMLKGH----LPKEIGNLSALSVLDLNS 218 (959)
Q Consensus 180 ~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~ 218 (959)
......++++++||+|.+... +.+.+.+.++|+..++++
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd 67 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSD 67 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHh
Confidence 344556666777777766532 223344555666665553
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.5e-11 Score=137.64 Aligned_cols=237 Identities=29% Similarity=0.337 Sum_probs=143.5
Q ss_pred ccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEc
Q 002155 317 VVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNL 396 (959)
Q Consensus 317 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 396 (959)
..++.+.+..|.|.. ....+..+++|..|++.+|+|..+ ...+..+.+|+.|++++|.|+... .+..++.|+.|++
T Consensus 72 ~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l 147 (414)
T KOG0531|consen 72 TSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNL 147 (414)
T ss_pred HhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhhee
Confidence 334444455555442 223355566666666666666632 222555666666666666666332 2445555777777
Q ss_pred cCCcCCCCCCCccCCcccccccccCCccccCCCc-hhhhcccccceEeeccccccCCccccccchhhhhhceeccCCccc
Q 002155 397 TGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLP-SSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLF 475 (959)
Q Consensus 397 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l 475 (959)
.+|.|+.+ ..+..++.|+.+++++|++....+ . ...+.+++.+++.+|.+..+..... ...+..+++..|.+
T Consensus 148 ~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~~~~~----~~~l~~~~l~~n~i 220 (414)
T KOG0531|consen 148 SGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIEGLDL----LKKLVLLSLLDNKI 220 (414)
T ss_pred ccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcccchHH----HHHHHHhhcccccc
Confidence 77777632 345556777777777777764333 2 4667777777777777765432111 12344446677776
Q ss_pred CCCCCccccCcc--ccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccC--
Q 002155 476 DGGLPRSLGNLS--YLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMV-- 551 (959)
Q Consensus 476 ~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-- 551 (959)
+..-+ +..+. .|+.+++++|++. .++..+..+..+..|++++|++... ..+...+.+..+....|.+....
T Consensus 221 ~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (414)
T KOG0531|consen 221 SKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAI 295 (414)
T ss_pred eeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhh
Confidence 64322 12222 3889999999998 5557778888999999999988743 34566777788888888876321
Q ss_pred -CC--CcccCCCccccccCCC
Q 002155 552 -PR--SGICQNLSKISLTGNK 569 (959)
Q Consensus 552 -~~--~~~~~~l~~l~l~~N~ 569 (959)
.. .....++..+.+.+||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~ 316 (414)
T KOG0531|consen 296 SQEYITSAAPTLVTLTLELNP 316 (414)
T ss_pred hccccccccccccccccccCc
Confidence 11 2334556666677765
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.4e-09 Score=102.68 Aligned_cols=131 Identities=24% Similarity=0.314 Sum_probs=99.7
Q ss_pred CeeccCCCeEEEEEEcCCCCEEEEEEc-cccc-hhh------HHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 685 NIIGDGGFGTVYKAALPDGKTVAVKKL-SQAK-TQG------HREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~vavK~~-~~~~-~~~------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
..+++|+-+.+|.+.+. |.++++|.- .+.. ... .+.-..|++++++++--.|...+-+..+.+...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35889999999999774 445666643 2221 111 12345799999998776666656566778888999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
++|..|.+++... ...++..+-+.+.-|| ..||||||+.++||.+..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA-----------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc-----------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888764 1356667777788899 89999999999999998774 99999999863
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=8.7e-12 Score=127.31 Aligned_cols=65 Identities=23% Similarity=0.293 Sum_probs=33.8
Q ss_pred cCccccceeeeccccccccCCcCC-----cCCCCCcEEeCCCCcCCCC----CCccccCCCCccEEecccCcCc
Q 002155 484 GNLSYLTNLDLHENKFTGEIPPDL-----GNLMQLEYLDVSRNRLCGQ----IPETMCSLSNLLYLSLAENRLE 548 (959)
Q Consensus 484 ~~l~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 548 (959)
..+++|+.|++++|.+......+| ...++|++|+|.+|.|+.. +...+...+.|..|+|++|++.
T Consensus 238 ~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 238 SSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 334445555555554443222222 1245666666666666531 1223445677777777777773
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.6e-10 Score=111.64 Aligned_cols=126 Identities=24% Similarity=0.259 Sum_probs=31.6
Q ss_pred ccCCCcccEEeccCCccccccCcccc-cccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccc-cCCCC
Q 002155 133 YLSKLPLMVLDLDSNNFTGIIPVSIW-NSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEI-GNLSA 210 (959)
Q Consensus 133 ~~~~~~L~~L~ls~n~l~~~~p~~~~-~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~-~~l~~ 210 (959)
......+++|+|++|+|+.+. .+. .+.+|+.|++++|.|+ .++ .+..++.|+.|++++|+|+. +...+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~Ie--~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTIE--NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred ccccccccccccccccccccc--chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCc-cccchHHhCCc
Confidence 333334555566666555321 222 2445555555555554 222 34455555555555555552 22223 24555
Q ss_pred CCEEEccCCcCCccC-CccccCCCCCCEEEcccccCCCCC---chhhhcccCCCeeE
Q 002155 211 LSVLDLNSNLFDGII-PYELGDCISLTTLDLGNNNLSGLI---PEKIADLAQLQCLV 263 (959)
Q Consensus 211 L~~L~L~~N~i~~~~-~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~l~~L~~L~ 263 (959)
|+.|+|++|+|.... -..+..+++|+.|+|.+|.++... ...+..+|+|+.||
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 555555555554221 123445555556666555554321 12345555555554
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.1e-10 Score=110.80 Aligned_cols=127 Identities=28% Similarity=0.259 Sum_probs=48.7
Q ss_pred cCCcccccEEEccCCcCcccCCcccc-CCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCcccccc-ccCCC
Q 002155 313 LGSCVVVVDLLLNNNMLSGKIPGSLS-RLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSL-GSLGG 390 (959)
Q Consensus 313 ~~~~~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~ 390 (959)
+.++.++++|+|.+|.|+.+ ..++ .+.+|+.|++++|.|+.+ +.+..++.|++|++++|+|+.. ...+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSI-SEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred cccccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCcc-ccchHHhCCc
Confidence 34555678888888888743 2354 578889999999998854 3577788899999999999844 3334 46888
Q ss_pred CcEEEccCCcCCCCC-CCccCCcccccccccCCccccCCCc---hhhhcccccceEee
Q 002155 391 LVKLNLTGNKLSGKV-PTSFGNLKELTHLDLSFNELDGQLP---SSLSNILNLVGLYL 444 (959)
Q Consensus 391 L~~L~L~~N~i~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~---~~l~~l~~L~~L~L 444 (959)
|++|++++|+|.... -..+..+++|++|+|.+|+++...- ..+..+|+|+.||-
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 999999999887532 2456678888888999888874321 24667888887753
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.6e-09 Score=112.48 Aligned_cols=142 Identities=20% Similarity=0.254 Sum_probs=106.4
Q ss_pred CeeccCCCeEEEEEEcCCCCEEEEEEccccch-hhHHHHHHHHHHHhcCCCC--ceeccccceecC---CceEEEEEecc
Q 002155 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKT-QGHREFTAEMETLGKVKHQ--NLVPLLGYCSFD---EEKLLVYEYMV 758 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~---~~~~lv~e~~~ 758 (959)
+.||.|.++.||++...+|+.+++|....... .....+..|+++++.+++. .+.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999887778999998765332 2345678899999999763 356666665543 35689999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF--------------------------------------- 799 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--------------------------------------- 799 (959)
|.++.+.... ..++..+...++.++++++.+||+..
T Consensus 84 G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 84 GRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred CEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 9888665431 13555666777778888888887321
Q ss_pred --------------CCCeEeCCCCCCCEEECC--CCcEEEcccccccc
Q 002155 800 --------------TPHIIHRDIKASNILLNE--EFEAKVADFGLARL 831 (959)
Q Consensus 800 --------------~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~ 831 (959)
...++|+|++|.||+++. ++.+.++||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 66789999998853
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.7e-10 Score=133.67 Aligned_cols=249 Identities=20% Similarity=0.248 Sum_probs=166.2
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
..+.|.+.+-+-+|+++.++.++-. .|...+.|+...+ .....+....+-.+.-..++|.+++...-+......++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 3456777788999999999988754 3545555544322 12122222333333333456777777655556678899
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
|++|..++++...++... ..+...+......+..+.+||| ...+.|+|++|.|.+...+++.+++|||.....
T Consensus 882 ~~~~~~~~~~~Skl~~~~----~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG----CLSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred hhHHhccCCchhhhhcCC----CcccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCcccccccc
Confidence 999999999999988765 2344445556667888999999 677999999999999999999999999843322
Q ss_pred ccc----------------------------c--ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 002155 833 SAC----------------------------E--THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882 (959)
Q Consensus 833 ~~~----------------------------~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p 882 (959)
.-. . ........+|+.|.+||...+......+|+|+.|++++|.++|.+|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 100 0 0111234689999999999999999999999999999999999999
Q ss_pred CCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 002155 883 TGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTML 947 (959)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 947 (959)
|....+.. +.+.+..+... .+..+........+++...+..+|.+|-.|.
T Consensus 1035 ~na~tpq~--------~f~ni~~~~~~-------~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1035 FNAETPQQ--------IFENILNRDIP-------WPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCcchhh--------hhhccccCCCC-------CCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 97654331 11111111110 1111222223344555566777888887654
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.5e-08 Score=103.59 Aligned_cols=266 Identities=14% Similarity=0.167 Sum_probs=161.6
Q ss_pred CCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccc------eecCC-ceEEEE
Q 002155 683 KTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGY------CSFDE-EKLLVY 754 (959)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~------~~~~~-~~~lv~ 754 (959)
.++.||+|+-+-+|-.-- -...+.|+..........+ -+..|... .||-+..-+.+ --... ...+.|
T Consensus 15 ~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecch--hhchhheeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 356799999999996431 1223556665443332222 22223333 46644331211 11122 256788
Q ss_pred EeccCCCH-HHHHhh--hcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 755 EYMVNGSL-DLWLRN--RTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 755 e~~~~g~L-~~~l~~--~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
..+++..- .++.+- +.......+|...++++..++.+.+-|| ..|.+-||+.++|+|+.+++.|.|.|-.....
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccceee
Confidence 88876532 333221 1222345789999999999999999999 89999999999999999999999998654433
Q ss_pred cccccccccccccccccccCCCcCC-----CCCCCCcCcchhHHHHHHHHHhC-CCCCCCCCccccCCchHH-HH-HHHh
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQ-----SGRSTTRGDVYSFGVILLELVTG-KEPTGPEFKDIEGGNLVG-WV-FQKM 903 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg-~~p~~~~~~~~~~~~~~~-~~-~~~~ 903 (959)
...+ .....-+|...|.+||.-. +..-+...|-|.+|+++++++.| ++||.+..-......-.+ .+ ....
T Consensus 167 ~~ng--~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f 244 (637)
T COG4248 167 NANG--TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRF 244 (637)
T ss_pred ccCC--ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhccee
Confidence 3221 2222346889999999633 33446788999999999999986 899865432211111111 00 0000
Q ss_pred -hcCccccccCccccCCCCHHHHHHHHHHHHHcccCC--CCCCCCHHHHHHHHHhhhc
Q 002155 904 -KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDN--PAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 904 -~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d--P~~Rps~~ell~~L~~l~~ 958 (959)
...+......|........-....+..+..+|+... |.-||+++..+..|..++.
T Consensus 245 ~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~ 302 (637)
T COG4248 245 AYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ 302 (637)
T ss_pred eechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 000111122233333333444556677777888654 4579999999999988764
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=8.5e-09 Score=96.61 Aligned_cols=143 Identities=18% Similarity=0.211 Sum_probs=103.6
Q ss_pred CCCeeccCCCeEEEEEEcCCCCEEEEEEc-cccc-------hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 683 KTNIIGDGGFGTVYKAALPDGKTVAVKKL-SQAK-------TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~-~~~~-------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
....+-+|+-+.|+++.+ .|+.++||.- .+.. .-....-.+|++.+.+++--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 356789999999999998 4787777753 2211 112234567999999887555544444566667788999
Q ss_pred EeccC-CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC---cEEEccccccc
Q 002155 755 EYMVN-GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF---EAKVADFGLAR 830 (959)
Q Consensus 755 e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~~~ 830 (959)
||++| .++.+++...... ..........+..|-+.+.-|| ..+++|||+.++||++.+++ .+.++|||++.
T Consensus 90 E~~~g~~~vk~~i~~~~~~--~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMED--ESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EeccchhHHHHHHHHHccC--cccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchh
Confidence 99976 4788888765422 1122222678888999999999 89999999999999996654 45899999985
Q ss_pred c
Q 002155 831 L 831 (959)
Q Consensus 831 ~ 831 (959)
.
T Consensus 165 ~ 165 (229)
T KOG3087|consen 165 V 165 (229)
T ss_pred c
Confidence 3
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.8e-09 Score=130.38 Aligned_cols=296 Identities=23% Similarity=0.205 Sum_probs=163.6
Q ss_pred CCCceeeecccccccccCcccCCCcccEEeccCCc--cccccCcccccccceeEEEccccccccccCccccCCcCCceEe
Q 002155 114 SNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNN--FTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLV 191 (959)
Q Consensus 114 ~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~--l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 191 (959)
...+...+.+|.+. .++.......|++|-+..|. +..+.+..|..++.|+.|+|++|.-.+.+|..+++|-+|++|+
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~ 601 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLD 601 (889)
T ss_pred hheeEEEEeccchh-hccCCCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhccc
Confidence 34455555555554 33344444456666666665 4444444566677777777777766667888888888888888
Q ss_pred ccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccC--CCCCchhhhcccCCCeeEcccccC
Q 002155 192 LTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNL--SGLIPEKIADLAQLQCLVLSHNNL 269 (959)
Q Consensus 192 L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l--~~~~~~~~~~l~~L~~L~Ls~N~l 269 (959)
|++..|+ .+|..+.+|+.|.+|++..+.-...+|.....|.+|++|.+..-.. +...-..+..+.+|+.+.......
T Consensus 602 L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~ 680 (889)
T KOG4658|consen 602 LSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV 680 (889)
T ss_pred ccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh
Confidence 8888888 6788888888888888887776556667777788888888766542 222233344444444444432221
Q ss_pred CCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccC------CCCC
Q 002155 270 SGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSR------LTNL 343 (959)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~------l~~L 343 (959)
. ...+...+..+..+ .+.+.+.++... ..+..++.+.+|+.|.+.++.+.......+.. ++++
T Consensus 681 ~--------~~e~l~~~~~L~~~--~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l 749 (889)
T KOG4658|consen 681 L--------LLEDLLGMTRLRSL--LQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNL 749 (889)
T ss_pred H--------hHhhhhhhHHHHHH--hHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHH
Confidence 0 00000111111111 011222222222 34556667777777777777776433322221 1122
Q ss_pred CEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCC-CCCccCCcccccccccCC
Q 002155 344 TTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGK-VPTSFGNLKELTHLDLSF 422 (959)
Q Consensus 344 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~L~~ 422 (959)
..+...++... ..+.+..-.++|+.|.+..+.....+......+..++.+.+..+.+.+. .-...++++.+..+.++.
T Consensus 750 ~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l~~ 828 (889)
T KOG4658|consen 750 SKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPLSF 828 (889)
T ss_pred HHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEecccCc
Confidence 22222222211 1222233456788888887776655555566666666666666666654 234455555555555544
Q ss_pred c
Q 002155 423 N 423 (959)
Q Consensus 423 N 423 (959)
=
T Consensus 829 ~ 829 (889)
T KOG4658|consen 829 L 829 (889)
T ss_pred c
Confidence 3
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.7e-09 Score=127.69 Aligned_cols=62 Identities=27% Similarity=0.349 Sum_probs=39.7
Q ss_pred CccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCC-CCccccCCCCccEEecccCc
Q 002155 485 NLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQ-IPETMCSLSNLLYLSLAENR 546 (959)
Q Consensus 485 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~ 546 (959)
-.++|+.|++..+.....+.+....+..+..+-+..+.+.+. .-.....++.+..+.+.+=.
T Consensus 768 f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l~~~~ 830 (889)
T KOG4658|consen 768 FAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPLSFLK 830 (889)
T ss_pred ccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEecccCccc
Confidence 457888888888877666666666667777767777777655 23445555555555544433
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.7e-08 Score=99.27 Aligned_cols=125 Identities=24% Similarity=0.297 Sum_probs=81.9
Q ss_pred EEEEEEcCCCCEEEEEEcccc--------------ch--------h----hHHHHHHHHHHHhcCCCCc--eecccccee
Q 002155 694 TVYKAALPDGKTVAVKKLSQA--------------KT--------Q----GHREFTAEMETLGKVKHQN--LVPLLGYCS 745 (959)
Q Consensus 694 ~V~~~~~~~~~~vavK~~~~~--------------~~--------~----~~~~~~~e~~~l~~l~h~n--iv~~~~~~~ 745 (959)
.||.|...+|..+|||..+.. .. . ......+|++.|.++..-+ +.+.+++
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 489999888999999976421 00 0 1123567999999997653 5555543
Q ss_pred cCCceEEEEEecc--CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHH-HHhcCCCCeEeCCCCCCCEEECCCCcEE
Q 002155 746 FDEEKLLVYEYMV--NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAF-LHHGFTPHIIHRDIKASNILLNEEFEAK 822 (959)
Q Consensus 746 ~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~~~~ivH~dlk~~Nill~~~~~~k 822 (959)
...++||||++ |..+..+.... ++......++.+++..+.. +| ..|+||||+.+.||+++++ .+.
T Consensus 79 --~~~~ivME~I~~~G~~~~~l~~~~------~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 79 --NRNVIVMEYIGEDGVPLPRLKDVD------LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp --ETTEEEEE--EETTEEGGCHHHCG------GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEE
T ss_pred --eCCEEEEEecCCCccchhhHHhcc------ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEE
Confidence 35689999998 65554444322 1123445677777775555 57 8899999999999999988 999
Q ss_pred Eccccccccc
Q 002155 823 VADFGLARLI 832 (959)
Q Consensus 823 l~Dfg~~~~~ 832 (959)
++|||.+...
T Consensus 147 iIDf~qav~~ 156 (188)
T PF01163_consen 147 IIDFGQAVDS 156 (188)
T ss_dssp E--GTTEEET
T ss_pred EEecCcceec
Confidence 9999988654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.1e-09 Score=84.22 Aligned_cols=61 Identities=33% Similarity=0.407 Sum_probs=41.8
Q ss_pred CCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeeccccc
Q 002155 66 SMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHI 126 (959)
Q Consensus 66 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~ 126 (959)
++|++|++++|+++...+..|.++++|++|++++|.++.+.+++|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3566777777777655556667777777777777777766667777777777777776654
|
... |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.2e-09 Score=84.18 Aligned_cols=61 Identities=43% Similarity=0.605 Sum_probs=45.4
Q ss_pred cccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcC
Q 002155 487 SYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRL 547 (959)
Q Consensus 487 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 547 (959)
++|++|++++|+++...+..|.++++|++|++++|+|+.+.|..|..+++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3577777777777755556777777777777777777776667777777777777777764
|
... |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=9.8e-08 Score=99.99 Aligned_cols=141 Identities=13% Similarity=0.112 Sum_probs=99.8
Q ss_pred CeeccCCCeEEEEEEcCCCCEEEEEEccccchh-----------hHHHHHHHHHHHhcCCCCce--eccccceec-----
Q 002155 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQ-----------GHREFTAEMETLGKVKHQNL--VPLLGYCSF----- 746 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~----- 746 (959)
+++-......|+++.+ +|+.|.||........ ....+.+|...+..+...+| ++.+++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4454444555777766 6788999976432211 11136788888888854333 333444432
Q ss_pred CCceEEEEEeccCC-CHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-------C
Q 002155 747 DEEKLLVYEYMVNG-SLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE-------E 818 (959)
Q Consensus 747 ~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-------~ 818 (959)
....++|||++++. +|.+++..... ...+...+..++.+++..+..|| ..||+|||++++|||++. +
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~--~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~ 181 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWAT--NPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREED 181 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCC
Confidence 23578999999886 89998864321 23455677789999999999999 899999999999999975 4
Q ss_pred CcEEEcccccccc
Q 002155 819 FEAKVADFGLARL 831 (959)
Q Consensus 819 ~~~kl~Dfg~~~~ 831 (959)
+.+.++||+.+..
T Consensus 182 ~~~~LIDl~r~~~ 194 (268)
T PRK15123 182 LKLSVIDLHRAQI 194 (268)
T ss_pred ceEEEEECCcccc
Confidence 6899999998854
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.9e-07 Score=101.02 Aligned_cols=170 Identities=22% Similarity=0.283 Sum_probs=127.6
Q ss_pred CeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceec----CCceEEEEEeccC-CCHHHH
Q 002155 692 FGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF----DEEKLLVYEYMVN-GSLDLW 765 (959)
Q Consensus 692 ~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~-g~L~~~ 765 (959)
-.+.|++.. .||..|+.|+++............-++.++++.|+|+|++.++|.. +...++||+|.++ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 357788874 4899999999965544443334556889999999999999998862 3467899999985 466554
Q ss_pred Hhhhc-----------CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 766 LRNRT-----------GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 766 l~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
--... ......++...|.++.|+..||.++| +.|+..+-+.+.+|+++.+.+++|+..|.......
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 32211 11234678899999999999999999 88999999999999999999999999888765432
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p 882 (959)
.. . |.+.+ -.+-|.-.+|.+++.+.||..-
T Consensus 446 d~-------------~--~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 446 DP-------------T--EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CC-------------C--cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 11 0 11111 2356888999999999999654
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.73 E-value=8.9e-08 Score=96.16 Aligned_cols=136 Identities=24% Similarity=0.226 Sum_probs=97.3
Q ss_pred CCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc----------------------hhhHHHHHHHHHHHhcCCCC--c
Q 002155 681 FCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK----------------------TQGHREFTAEMETLGKVKHQ--N 736 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~~e~~~l~~l~h~--n 736 (959)
..++..||-|.-+.||.|..+.|.++|||.-+... ........+|.++|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 34578899999999999999999999999532100 01123456799999998654 5
Q ss_pred eeccccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC
Q 002155 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN 816 (959)
Q Consensus 737 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 816 (959)
|.+.+++ +...+||||++|.-|...- ++......++..|++-+...- ..|+||||+.+-||+++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r---------~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV~ 236 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR---------LDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILVT 236 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc---------CcccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEEe
Confidence 6666654 5678999999986663322 112233344555555555554 57899999999999999
Q ss_pred CCCcEEEccccccccc
Q 002155 817 EEFEAKVADFGLARLI 832 (959)
Q Consensus 817 ~~~~~kl~Dfg~~~~~ 832 (959)
++|.+.++||-.+...
T Consensus 237 ~dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 237 EDGDIVVIDWPQAVPI 252 (304)
T ss_pred cCCCEEEEeCcccccC
Confidence 9999999999877543
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.65 E-value=6.8e-08 Score=109.47 Aligned_cols=140 Identities=18% Similarity=0.253 Sum_probs=93.1
Q ss_pred CeeccCCCeEEEEEEcCCCCEEEEEEccccchhhH------------------------------H----------HHHH
Q 002155 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGH------------------------------R----------EFTA 724 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~------------------------------~----------~~~~ 724 (959)
+.|+.++-|.||+|++++|+.||||+.+..-.... + ++..
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 67999999999999999999999998764211100 0 2344
Q ss_pred HHHHHhcCC-----CCceecccc-ceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHH-HHHHHh
Q 002155 725 EMETLGKVK-----HQNLVPLLG-YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARG-LAFLHH 797 (959)
Q Consensus 725 e~~~l~~l~-----h~niv~~~~-~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~-l~~LH~ 797 (959)
|...+.+++ .|.+ ++-. |....+...++|||++|..+.+...-... ..+. ..++..++++ +..+-
T Consensus 211 EA~n~~~~~~nf~~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~---g~d~---k~ia~~~~~~f~~q~~- 282 (517)
T COG0661 211 EAANAERFRENFKDDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA---GIDR---KELAELLVRAFLRQLL- 282 (517)
T ss_pred HHHHHHHHHHHcCCCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHHHhc---CCCH---HHHHHHHHHHHHHHHH-
Confidence 555555552 2332 2222 33345778999999999999887432221 1332 2233333322 22222
Q ss_pred cCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 798 ~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
..|++|.|.+|.||+++.+|++.+.|||+......
T Consensus 283 --~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 283 --RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred --hcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 46999999999999999999999999999977653
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.5e-09 Score=120.36 Aligned_cols=88 Identities=33% Similarity=0.365 Sum_probs=39.5
Q ss_pred CccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhccc
Q 002155 178 PYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLA 257 (959)
Q Consensus 178 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 257 (959)
..++.-++.|+.|+|++|+++.. +.+..+.+|+.|||++|++..+.--...++. |+.|.+++|.++.+ ..+.++.
T Consensus 180 D~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie~Lk 254 (1096)
T KOG1859|consen 180 DESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTL--RGIENLK 254 (1096)
T ss_pred HHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhh--hhHHhhh
Confidence 33444444455555555554421 1444455555555555555422222222222 55555555554433 3344555
Q ss_pred CCCeeEcccccCC
Q 002155 258 QLQCLVLSHNNLS 270 (959)
Q Consensus 258 ~L~~L~Ls~N~l~ 270 (959)
+|+.||+++|-|.
T Consensus 255 sL~~LDlsyNll~ 267 (1096)
T KOG1859|consen 255 SLYGLDLSYNLLS 267 (1096)
T ss_pred hhhccchhHhhhh
Confidence 5555555555443
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.9e-09 Score=119.59 Aligned_cols=128 Identities=30% Similarity=0.296 Sum_probs=58.6
Q ss_pred cccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceee
Q 002155 414 ELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLD 493 (959)
Q Consensus 414 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 493 (959)
.|.+.+.++|++. ....++.-++.|+.|+|++|+++... ... ...+|.+|||+.|.++...--...++. |..|.
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr--~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~ 238 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLR--RLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLN 238 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHH--hcccccccccccchhccccccchhhhh-heeee
Confidence 4666777777776 55666666777777777777766432 110 111233333333333311111112222 45555
Q ss_pred eccccccccCCcCCcCCCCCcEEeCCCCcCCCCCC-ccccCCCCccEEecccCcCcc
Q 002155 494 LHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIP-ETMCSLSNLLYLSLAENRLEG 549 (959)
Q Consensus 494 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~ 549 (959)
|+||.++. + ..+.+|.+|+.||+++|-|++.-. .-++.|..|..|+|.||++.+
T Consensus 239 lrnN~l~t-L-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 239 LRNNALTT-L-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred ecccHHHh-h-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 55555542 1 234445555555555554443111 112333444444444444443
|
|
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.9e-08 Score=100.53 Aligned_cols=111 Identities=27% Similarity=0.261 Sum_probs=65.9
Q ss_pred cccccEEEccCCcCcccCCc-cc-cCCCCCCEEEccCCCCCCC--CCCCcCCCCcceEEEeeCcccCCccccccccCCCC
Q 002155 316 CVVVVDLLLNNNMLSGKIPG-SL-SRLTNLTTLDLSRNQLTGP--IPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGL 391 (959)
Q Consensus 316 ~~~L~~L~L~~n~i~~~~~~-~~-~~l~~L~~L~Ls~n~l~~~--~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 391 (959)
...+.-|.+.++.|...... .| ...+.++.+||.+|+|+.. +...+.+++.|+.|+++.|++...+-..-..+.+|
T Consensus 44 ~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl 123 (418)
T KOG2982|consen 44 LRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNL 123 (418)
T ss_pred ccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccce
Confidence 33445555666655432211 12 3456777778888777642 22334567777888888887764332222456677
Q ss_pred cEEEccCCcCCCC-CCCccCCcccccccccCCcccc
Q 002155 392 VKLNLTGNKLSGK-VPTSFGNLKELTHLDLSFNELD 426 (959)
Q Consensus 392 ~~L~L~~N~i~~~-~~~~~~~l~~L~~L~L~~N~l~ 426 (959)
+.|.|.+..+.-. ....+..+|.+++|++|.|.+.
T Consensus 124 ~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~r 159 (418)
T KOG2982|consen 124 RVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLR 159 (418)
T ss_pred EEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhh
Confidence 8888877766522 2344566778888888887443
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.9e-08 Score=110.46 Aligned_cols=150 Identities=21% Similarity=0.300 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccccc--------cccccccccCCCcCC
Q 002155 785 ACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVST--------DIAGTFGYIPPEYGQ 856 (959)
Q Consensus 785 ~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~--------~~~gt~~y~aPE~~~ 856 (959)
+.+++.|+.|+|. +.++||++|.|++|.+++.+.+|++.|+.+............ -......|.|||++.
T Consensus 105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 3345599999997 789999999999999999999999999998655432111111 112456899999999
Q ss_pred CCCCCCcCcchhHHHHHHHHHhCCCC-CCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHc
Q 002155 857 SGRSTTRGDVYSFGVILLELVTGKEP-TGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDC 935 (959)
Q Consensus 857 ~~~~~~~~DvwslG~il~elltg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 935 (959)
+...+.++|+||+|+.+|.+..|+.+ +...... +......... + ............++.+=+.++
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~-----~~~~~~~~~~--------~-~~~~~~s~~~p~el~~~l~k~ 248 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGL-----LSYSFSRNLL--------N-AGAFGYSNNLPSELRESLKKL 248 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCc-----chhhhhhccc--------c-cccccccccCcHHHHHHHHHH
Confidence 98889999999999999999955544 3221111 1110000000 0 001111233444566667778
Q ss_pred ccCCCCCCCCHHHHH
Q 002155 936 LSDNPAMRPTMLHVL 950 (959)
Q Consensus 936 l~~dP~~Rps~~ell 950 (959)
+..++..||++.++.
T Consensus 249 l~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 249 LNGDSAVRPTLDLLL 263 (700)
T ss_pred hcCCcccCcchhhhh
Confidence 999999999776654
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.48 E-value=6e-09 Score=92.17 Aligned_cols=111 Identities=25% Similarity=0.297 Sum_probs=60.7
Q ss_pred cccccccCCccccCCCchh---hhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccc
Q 002155 414 ELTHLDLSFNELDGQLPSS---LSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLT 490 (959)
Q Consensus 414 ~L~~L~L~~N~l~~~~~~~---l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~ 490 (959)
.+..++|+.+++- .+++. +.....|...+|++|.+...++.+- ..++.++
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft--------------------------~kf~t~t 80 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFT--------------------------IKFPTAT 80 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHh--------------------------hccchhh
Confidence 3556667776664 33433 3334455555666666655444321 1233555
Q ss_pred eeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCC
Q 002155 491 NLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPR 553 (959)
Q Consensus 491 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 553 (959)
.|+|++|.|+ .+|..++.++.|+.|+++.|.+. ..|..+..|.++.+|+..+|.+..++..
T Consensus 81 ~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~eid~d 141 (177)
T KOG4579|consen 81 TLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARAEIDVD 141 (177)
T ss_pred hhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccccCcHH
Confidence 5666666665 45555666666666666666665 4555555566666666666655554444
|
|
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.1e-06 Score=86.93 Aligned_cols=137 Identities=17% Similarity=0.224 Sum_probs=92.1
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHH---------HHHHHHHhcCCCC---ceeccccce
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREF---------TAEMETLGKVKHQ---NLVPLLGYC 744 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~---------~~e~~~l~~l~h~---niv~~~~~~ 744 (959)
..++|...+++-......|.+... +|..+++|..+.......+.| .+++..+..++.. ..+.++.+.
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 356788888888888887877766 678999998875443322222 2334444444322 223322222
Q ss_pred -----ecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC
Q 002155 745 -----SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF 819 (959)
Q Consensus 745 -----~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 819 (959)
......++||||++|..+.++.. ++. .++..+++++.-+| ..|++|||..|+|++++.+
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH---~~G~~HGD~hpgNFlv~~~- 171 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLH---KHGFYHGDPHPGNFLVSNN- 171 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHH---HcCCccCCCCcCcEEEECC-
Confidence 12244578999999988866532 111 34566778899999 8999999999999999865
Q ss_pred cEEEccccccc
Q 002155 820 EAKVADFGLAR 830 (959)
Q Consensus 820 ~~kl~Dfg~~~ 830 (959)
.++++||+..+
T Consensus 172 ~i~iID~~~k~ 182 (229)
T PF06176_consen 172 GIRIIDTQGKR 182 (229)
T ss_pred cEEEEECcccc
Confidence 59999998764
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.6e-06 Score=84.17 Aligned_cols=138 Identities=17% Similarity=0.225 Sum_probs=102.3
Q ss_pred eccCCCeEEEEEEcCCCCEEEEEEcccc-----c-hhhHHHHHHHHHHHhcCCCCc--eecccccee-c----CCceEEE
Q 002155 687 IGDGGFGTVYKAALPDGKTVAVKKLSQA-----K-TQGHREFTAEMETLGKVKHQN--LVPLLGYCS-F----DEEKLLV 753 (959)
Q Consensus 687 lg~G~~g~V~~~~~~~~~~vavK~~~~~-----~-~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~-~----~~~~~lv 753 (959)
-|+||-+.|++.... |+.+-+|+-... . +.....|.+|+..+.++..-+ +.+.. ++. . ....++|
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 467899999997764 557888876421 1 334567999999999886432 44444 332 1 1246899
Q ss_pred EEeccC-CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc--EEEccccccc
Q 002155 754 YEYMVN-GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE--AKVADFGLAR 830 (959)
Q Consensus 754 ~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~~~ 830 (959)
+|-++| .+|.+++.+.. ..+.+...+..++.+++..+.-|| ..|+.|+|+.+.||+++.++. ++++||--++
T Consensus 104 Te~L~g~~~L~~~l~~~~--~~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQHA--VSPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcCC--cCCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 998763 48888886533 224567778899999999999999 899999999999999986666 9999998775
Q ss_pred c
Q 002155 831 L 831 (959)
Q Consensus 831 ~ 831 (959)
.
T Consensus 179 ~ 179 (216)
T PRK09902 179 R 179 (216)
T ss_pred h
Confidence 4
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 959 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 1e-58 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 1e-58 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 8e-52 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 6e-17 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 8e-05 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 1e-51 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 6e-17 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 7e-05 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 1e-47 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 1e-47 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 7e-40 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 1e-39 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 2e-38 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 5e-36 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 1e-30 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 6e-30 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 4e-23 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 1e-20 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 8e-23 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 1e-22 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 1e-22 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 1e-22 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 1e-22 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 1e-22 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 1e-22 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 1e-22 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 2e-22 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 2e-22 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 2e-22 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 2e-22 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 3e-22 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 4e-22 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 4e-22 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 5e-22 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 6e-22 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 7e-22 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 8e-22 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 9e-22 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 2e-21 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 2e-21 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 2e-21 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 2e-21 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 2e-21 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 3e-21 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 3e-21 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 3e-21 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 3e-21 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 4e-21 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 4e-21 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 4e-21 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 4e-21 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 4e-21 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 5e-21 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 5e-21 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 6e-21 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 6e-21 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 7e-21 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 7e-21 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 8e-21 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 8e-21 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 8e-21 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 1e-20 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 1e-20 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 1e-20 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 1e-20 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 1e-20 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 1e-20 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-20 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 2e-20 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 2e-20 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 2e-20 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 2e-20 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 2e-20 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 2e-20 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 3e-20 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 5e-20 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 5e-20 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 6e-20 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 6e-20 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 7e-20 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 7e-20 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 7e-20 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 9e-20 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 9e-20 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 9e-20 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 1e-19 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 1e-19 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 1e-19 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 1e-19 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 1e-19 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-19 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 1e-19 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 1e-19 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 2e-19 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 2e-19 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 2e-19 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 2e-19 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 2e-19 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 2e-19 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 2e-19 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 2e-19 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 2e-19 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 3e-19 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 3e-19 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 3e-19 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 3e-19 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 4e-19 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 6e-19 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 6e-19 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 9e-19 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 9e-19 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 9e-19 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 1e-18 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 1e-18 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 1e-18 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 1e-18 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 1e-18 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 1e-18 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 1e-18 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 1e-18 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 1e-18 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 2e-18 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 2e-18 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 2e-18 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 2e-18 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 2e-18 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 2e-18 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 2e-18 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 3e-18 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 3e-18 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-18 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 3e-18 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 3e-18 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 4e-18 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 4e-18 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 4e-18 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 4e-18 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 5e-18 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 6e-18 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 7e-18 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 8e-18 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 1e-17 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 1e-17 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-17 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-17 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-17 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-17 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 2e-17 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 2e-17 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 2e-17 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-17 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 2e-17 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 2e-17 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 2e-17 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 3e-17 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 3e-17 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 3e-17 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 3e-17 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 3e-17 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 3e-17 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 3e-17 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-17 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 3e-17 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 3e-17 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 3e-17 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 4e-17 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 4e-17 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 5e-17 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 6e-17 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 9e-17 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-16 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 1e-16 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-16 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 1e-16 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 1e-16 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 1e-16 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 1e-16 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 2e-16 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 2e-16 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-16 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 2e-16 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 2e-16 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 2e-16 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 2e-16 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 2e-16 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 2e-16 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 2e-16 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 2e-16 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 2e-16 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 2e-16 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 2e-16 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 2e-16 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 2e-16 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 2e-16 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 2e-16 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 2e-16 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 2e-16 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 2e-16 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-16 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 2e-16 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 2e-16 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 2e-16 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-16 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 2e-16 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 3e-16 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 3e-16 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 3e-16 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 3e-16 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 3e-16 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 3e-16 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 3e-16 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 3e-16 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 3e-16 | ||
| 3lmg_A | 344 | Crystal Structure Of The Erbb3 Kinase Domain In Com | 3e-16 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 3e-16 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 3e-16 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 3e-16 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 4e-16 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 4e-16 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 4e-16 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 4e-16 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 4e-16 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 4e-16 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 4e-16 | ||
| 3kex_A | 325 | Crystal Structure Of The Catalytically Inactive Kin | 5e-16 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 5e-16 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 5e-16 | ||
| 3pp0_A | 338 | Crystal Structure Of The Kinase Domain Of Human Her | 5e-16 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 5e-16 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 6e-16 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 6e-16 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 6e-16 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 7e-16 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 7e-16 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 7e-16 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 7e-16 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 7e-16 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 7e-16 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 8e-16 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 9e-16 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 9e-16 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 9e-16 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 9e-16 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-15 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 1e-15 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 1e-15 | ||
| 3q4t_A | 322 | Crystal Structure Of Activin Receptor Type-Iia (Acv | 1e-15 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 1e-15 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 1e-15 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 1e-15 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 1e-15 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 1e-15 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 1e-15 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 1e-15 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 1e-15 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 2e-15 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 2e-15 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 2e-15 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 2e-15 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 2e-15 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 2e-15 | ||
| 3my0_A | 305 | Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai | 2e-15 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 3e-15 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 3e-15 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 3e-15 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 4e-15 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 4e-15 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-15 | ||
| 2oh4_A | 316 | Crystal Structure Of Vegfr2 With A Benzimidazole-Ur | 4e-15 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 4e-15 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 4e-15 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 4e-15 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-15 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 4e-15 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-15 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 4e-15 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 4e-15 | ||
| 4g5p_A | 330 | Crystal Structure Of Egfr Kinase T790m In Complex W | 4e-15 | ||
| 2jiu_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 4e-15 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 5e-15 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 5e-15 | ||
| 2gs2_A | 330 | Crystal Structure Of The Active Egfr Kinase Domain | 5e-15 | ||
| 3ika_A | 331 | Crystal Structure Of Egfr 696-1022 T790m Mutant Cov | 5e-15 | ||
| 4i24_A | 329 | Structure Of T790m Egfr Kinase Domain Co-crystalliz | 5e-15 | ||
| 2jiv_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 5e-15 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 5e-15 | ||
| 4i23_A | 329 | Crystal Structure Of The Wild-type Egfr Kinase Doma | 6e-15 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 6e-15 | ||
| 2jit_A | 327 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 6e-15 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 6e-15 | ||
| 3vjo_A | 334 | Crystal Structure Of The Wild-Type Egfr Kinase Doma | 6e-15 | ||
| 1xkk_A | 352 | Egfr Kinase Domain Complexed With A Quinazoline Inh | 6e-15 | ||
| 1m14_A | 333 | Tyrosine Kinase Domain From Epidermal Growth Factor | 6e-15 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 7e-15 | ||
| 4g5j_A | 330 | Crystal Structure Of Egfr Kinase In Complex With Bi | 7e-15 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 7e-15 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 7e-15 | ||
| 2j5e_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 7e-15 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 7e-15 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 7e-15 | ||
| 3bel_A | 315 | X-Ray Structure Of Egfr In Complex With Oxime Inhib | 8e-15 | ||
| 2j5f_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 8e-15 | ||
| 2gs7_A | 330 | Crystal Structure Of The Inactive Egfr Kinase Domai | 8e-15 | ||
| 4hjo_A | 337 | Crystal Structure Of The Inactive Egfr Tyrosine Kin | 8e-15 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 8e-15 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 8e-15 | ||
| 2rfd_A | 324 | Crystal Structure Of The Complex Between The Egfr K | 8e-15 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 9e-15 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 9e-15 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 1e-14 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-14 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-14 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 1e-14 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 1e-14 | ||
| 3lzb_A | 327 | Egfr Kinase Domain Complexed With An Imidazo[2,1-B] | 1e-14 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 1e-14 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 1e-14 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 1e-14 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 2e-14 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 2e-14 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 2e-14 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 2e-14 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 2e-14 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 2e-14 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 2e-14 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 2e-14 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 2e-14 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 2e-14 | ||
| 3w2o_A | 331 | Egfr Kinase Domain T790m/l858r Mutant With Tak-285 | 2e-14 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 2e-14 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 2e-14 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 2e-14 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 2e-14 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 2e-14 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 2e-14 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 2e-14 | ||
| 4i21_A | 329 | Crystal Structure Of L858r + T790m Egfr Kinase Doma | 2e-14 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 3e-14 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 3e-14 | ||
| 3ug1_A | 334 | Crystal Structure Of The Mutated Egfr Kinase Domain | 3e-14 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 3e-14 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 3e-14 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 3e-14 | ||
| 3gop_A | 361 | Crystal Structure Of The Egf Receptor Juxtamembrane | 3e-14 | ||
| 2eb2_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (G7 | 3e-14 | ||
| 2itn_A | 327 | Crystal Structure Of Egfr Kinase Domain G719s Mutat | 3e-14 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 3e-14 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 3e-14 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 3e-14 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 3e-14 | ||
| 2eb3_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (L8 | 3e-14 | ||
| 2itt_A | 327 | Crystal Structure Of Egfr Kinase Domain L858r Mutat | 3e-14 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 4e-14 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 4e-14 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 4e-14 | ||
| 4i1z_A | 329 | Crystal Structure Of The Monomeric (v948r) Form Of | 4e-14 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 4e-14 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 4e-14 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 4e-14 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 4e-14 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 5e-14 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 5e-14 | ||
| 4i20_A | 329 | Crystal Structure Of Monomeric (v948r) Primary Onco | 5e-14 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 5e-14 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 6e-14 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 6e-14 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 6e-14 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 6e-14 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 7e-14 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 7e-14 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 7e-14 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 7e-14 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 8e-14 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 8e-14 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 8e-14 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 9e-14 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 9e-14 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 9e-14 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 9e-14 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 1e-13 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 1e-13 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 1e-13 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 1e-13 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 1e-13 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 1e-13 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 1e-13 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 1e-13 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 1e-13 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 1e-13 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 1e-13 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 1e-13 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 1e-13 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 1e-13 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 1e-13 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 1e-13 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 2e-13 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 2e-13 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 2e-13 | ||
| 3h9r_A | 330 | Crystal Structure Of The Kinase Domain Of Type I Ac | 2e-13 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 2e-13 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 2e-13 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 2e-13 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 2e-13 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 3e-13 | ||
| 3mtf_A | 301 | Crystal Structure Of The Acvr1 Kinase In Complex Wi | 3e-13 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 3e-13 | ||
| 4dym_A | 301 | Crystal Structure Of The Acvr1 Kinase Domain In Com | 3e-13 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 3e-13 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 3e-13 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 3e-13 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 3e-13 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 3e-13 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 3e-13 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 3e-13 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 3e-13 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 3e-13 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 3e-13 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 3e-13 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 3e-13 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 3e-13 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 4e-13 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 4e-13 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 4e-13 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 4e-13 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 4e-13 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 4e-13 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 4e-13 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 4e-13 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 5e-13 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 5e-13 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 5e-13 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 5e-13 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 5e-13 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 5e-13 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 5e-13 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 5e-13 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 5e-13 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 5e-13 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 5e-13 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 5e-13 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 6e-13 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 6e-13 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 6e-13 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 6e-13 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 6e-13 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 6e-13 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 6e-13 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 6e-13 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 7e-13 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 7e-13 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 7e-13 | ||
| 1b6c_B | 342 | Crystal Structure Of The Cytoplasmic Domain Of The | 7e-13 | ||
| 1py5_A | 326 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 7e-13 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 8e-13 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 8e-13 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 8e-13 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 8e-13 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 8e-13 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 8e-13 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 9e-13 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 9e-13 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 1e-12 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 1e-12 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 1e-12 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 1e-12 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 1e-12 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 1e-12 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 1e-12 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 1e-12 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 1e-12 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 1e-12 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 1e-12 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 1e-12 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 1e-12 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 2e-12 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 2e-12 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 2e-12 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-12 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 2e-12 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 2e-12 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 2e-12 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 2e-12 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 2e-12 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 2e-12 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 2e-12 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 2e-12 | ||
| 2ozo_A | 613 | Autoinhibited Intact Human Zap-70 Length = 613 | 2e-12 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 2e-12 | ||
| 2qlu_A | 314 | Crystal Structure Of Activin Receptor Type Ii Kinas | 2e-12 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 2e-12 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 2e-12 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 2e-12 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 3e-12 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 3e-12 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 3e-12 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 3e-12 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 3e-12 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 3e-12 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 3e-12 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 3e-12 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 3e-12 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 3e-12 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 3e-12 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 3e-12 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 3e-12 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 3e-12 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 3e-12 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 3e-12 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 3e-12 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 3e-12 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 3e-12 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 3e-12 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 3e-12 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 3e-12 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 3e-12 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 3e-12 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 3e-12 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 3e-12 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 3e-12 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 3e-12 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 3e-12 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 3e-12 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 3e-12 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 3e-12 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 3e-12 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 3e-12 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 3e-12 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 3e-12 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 3e-12 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 3e-12 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 3e-12 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 3e-12 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 3e-12 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 3e-12 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 3e-12 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 3e-12 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 3e-12 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 3e-12 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 4e-12 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 4e-12 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 4e-12 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 4e-12 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 4e-12 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 4e-12 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 4e-12 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 4e-12 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 4e-12 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 4e-12 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 4e-12 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 4e-12 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 4e-12 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 4e-12 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 4e-12 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 4e-12 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 4e-12 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 4e-12 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 4e-12 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 4e-12 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 4e-12 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 4e-12 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 4e-12 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 4e-12 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 5e-12 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 5e-12 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 5e-12 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 5e-12 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 5e-12 | ||
| 3lxk_A | 327 | Structural And Thermodynamic Characterization Of Th | 5e-12 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 5e-12 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 6e-12 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 6e-12 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 6e-12 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 6e-12 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 6e-12 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 6e-12 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 6e-12 | ||
| 1rw8_A | 301 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 6e-12 | ||
| 1vjy_A | 303 | Crystal Structure Of A Naphthyridine Inhibitor Of H | 6e-12 | ||
| 3tzm_A | 309 | Tgf-Beta Receptor Type 1 In Complex With Sb431542 L | 6e-12 | ||
| 2wot_A | 306 | Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl) | 6e-12 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 6e-12 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 6e-12 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 7e-12 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 7e-12 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 7e-12 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 7e-12 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 8e-12 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 8e-12 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 8e-12 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 9e-12 | ||
| 3pjc_A | 315 | Crystal Structure Of Jak3 Complexed With A Potent A | 1e-11 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 1e-11 | ||
| 4hvd_A | 314 | Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h | 1e-11 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 1e-11 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 1e-11 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 1e-11 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 1e-11 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 1e-11 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 1e-11 | ||
| 1yvj_A | 290 | Crystal Structure Of The Jak3 Kinase Domain In Comp | 1e-11 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 1e-11 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 1e-11 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 2e-11 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 2e-11 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 2e-11 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 2e-11 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 2e-11 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 2e-11 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 2e-11 | ||
| 1u59_A | 287 | Crystal Structure Of The Zap-70 Kinase Domain In Co | 2e-11 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 2e-11 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 2e-11 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 2e-11 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 2e-11 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 2e-11 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 2e-11 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 2e-11 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 2e-11 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 2e-11 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 2e-11 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 2e-11 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 2e-11 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 3e-11 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 3e-11 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 3e-11 | ||
| 3mdy_A | 337 | Crystal Structure Of The Cytoplasmic Domain Of The | 3e-11 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 3e-11 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 3e-11 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 3e-11 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 3e-11 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 3e-11 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 3e-11 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 4e-11 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 4e-11 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 4e-11 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 4e-11 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 5e-11 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 5e-11 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 6e-11 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 6e-11 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 6e-11 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 7e-11 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 7e-11 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 7e-11 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 8e-11 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 9e-11 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 9e-11 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 1e-10 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 1e-10 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 1e-10 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 1e-10 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 1e-10 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 1e-10 | ||
| 3enm_A | 316 | The Structure Of The Map2k Mek6 Reveals An Autoinhi | 1e-10 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 1e-10 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 1e-10 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 1e-10 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 1e-10 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 1e-10 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 2e-10 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 2e-10 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 2e-10 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 2e-10 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 2e-10 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 2e-10 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 2e-10 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 2e-10 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 2e-10 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-10 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 2e-10 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 2e-10 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 2e-10 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 2e-10 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 2e-10 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 2e-10 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 3e-10 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 3e-10 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 4e-10 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 5e-10 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 5e-10 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 5e-10 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 6e-10 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 6e-10 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 6e-10 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 6e-10 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 7e-10 | ||
| 2omx_A | 462 | Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX | 7e-10 | ||
| 2omx_A | 462 | Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX | 7e-07 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 7e-10 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 8e-10 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 9e-10 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 1e-09 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 1e-09 | ||
| 2omt_A | 462 | Crystal Structure Of Inla G194s+sHEC1 COMPLEX Lengt | 1e-09 | ||
| 2omt_A | 462 | Crystal Structure Of Inla G194s+sHEC1 COMPLEX Lengt | 6e-07 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 1e-09 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 1e-09 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 1e-09 | ||
| 2omu_A | 462 | Crystal Structure Of Inla G194s+s Y369s/hec1 Comple | 1e-09 | ||
| 2omu_A | 462 | Crystal Structure Of Inla G194s+s Y369s/hec1 Comple | 7e-07 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 2e-09 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 2e-09 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-09 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 2e-09 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 3e-09 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 3e-09 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 3e-09 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 3e-09 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 3e-09 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 4e-09 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 4e-09 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 4e-09 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 4e-09 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 4e-09 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 4e-09 | ||
| 1xba_A | 291 | Crystal Structure Of Apo Syk Tyrosine Kinase Domain | 5e-09 | ||
| 3srv_B | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 5e-09 | ||
| 3tub_A | 293 | Crystal Structure Of Syk Kinase Domain With 1-(5-(6 | 5e-09 | ||
| 3vf8_A | 299 | Crystal Structure Of Spleen Tyrosine Kinase Syk Cat | 5e-09 | ||
| 4f4p_A | 273 | Syk In Complex With Ligand Lasw836 Length = 273 | 5e-09 | ||
| 3emg_A | 291 | Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami | 5e-09 | ||
| 4dfl_A | 274 | Crystal Structure Of Spleen Tyrosine Kinase Complex | 5e-09 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 5e-09 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 5e-09 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 5e-09 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 5e-09 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 5e-09 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 5e-09 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 5e-09 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 6e-09 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 6e-09 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 6e-09 | ||
| 4fl3_A | 635 | Structural And Biophysical Characterization Of The | 6e-09 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 6e-09 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 7e-09 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 8e-09 | ||
| 3vhe_A | 359 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 8e-09 | ||
| 1y6a_A | 366 | Crystal Structure Of Vegfr2 In Complex With A 2-Ani | 9e-09 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 9e-09 | ||
| 3vid_A | 356 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 9e-09 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 1e-08 | ||
| 3vhk_A | 368 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-08 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 1e-08 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 1e-08 | ||
| 3srv_A | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 1e-08 | ||
| 4fl2_A | 636 | Structural And Biophysical Characterization Of The | 1e-08 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 1e-08 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 1e-08 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 2e-08 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 2e-08 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-08 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 2e-08 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 2e-08 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 2e-08 | ||
| 2omy_A | 461 | Crystal Structure Of Inla S192n/hec1 Complex Length | 2e-08 | ||
| 2omy_A | 461 | Crystal Structure Of Inla S192n/hec1 Complex Length | 6e-07 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 2e-08 | ||
| 2omv_A | 461 | Crystal Structure Of Inla S192n Y369s/hec1 Complex | 2e-08 | ||
| 2omv_A | 461 | Crystal Structure Of Inla S192n Y369s/hec1 Complex | 6e-07 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 2e-08 | ||
| 1o6s_A | 466 | Internalin (Listeria Monocytogenes) E-Cadherin (Hum | 2e-08 | ||
| 1o6s_A | 466 | Internalin (Listeria Monocytogenes) E-Cadherin (Hum | 6e-07 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 2e-08 | ||
| 2rio_A | 434 | Structure Of The Dual Enzyme Ire1 Reveals The Basis | 2e-08 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 2e-08 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 2e-08 | ||
| 3qup_A | 323 | Inhibitor Bound Structure Of The Kinase Domain Of T | 2e-08 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 2e-08 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 2e-08 | ||
| 2omz_A | 466 | Crystal Structure Of Inla Y369a/hec1 Complex Length | 2e-08 | ||
| 2omz_A | 466 | Crystal Structure Of Inla Y369a/hec1 Complex Length | 6e-07 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 2e-08 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 2e-08 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 2e-08 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 2e-08 | ||
| 4azf_A | 417 | Human Dyrk2 In Complex With Leucettine L41 Length = | 2e-08 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 3e-08 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 3e-08 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 3e-08 | ||
| 3kvw_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 3e-08 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 3e-08 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 3e-08 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 3e-08 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 3e-08 | ||
| 3vqu_A | 320 | Crystal Structure Of Human Mps1 Catalytic Domain In | 4e-08 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 4e-08 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 4e-08 | ||
| 3dbq_A | 343 | Crystal Structure Of Ttk Kinase Domain Length = 343 | 4e-08 | ||
| 3hmn_A | 342 | Crystal Structure Of Human Mps1 Catalytic Domain In | 4e-08 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 4e-08 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 4e-08 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 5e-08 | ||
| 3hng_A | 360 | Crystal Structure Of Vegfr1 In Complex With N-(4-ch | 5e-08 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 5e-08 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 5e-08 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 5e-08 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 5e-08 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 5e-08 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 5e-08 | ||
| 1yxs_A | 293 | Crystal Structure Of Kinase Pim1 With P123m Mutatio | 6e-08 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 6e-08 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 6e-08 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 6e-08 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 7e-08 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 8e-08 | ||
| 3kmu_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 8e-08 | ||
| 2zmc_A | 390 | Crystal Structure Of Human Mitotic Checkpoint Kinas | 8e-08 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 9e-08 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 9e-08 | ||
| 2iwi_A | 312 | Crystal Structure Of The Human Pim2 In Complex With | 1e-07 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 1e-07 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 1e-07 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 1e-07 | ||
| 3lj0_A | 434 | Ire1 Complexed With Adp And Quercetin Length = 434 | 1e-07 | ||
| 3k2l_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 2e-07 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 2e-07 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 2e-07 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 2e-07 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 2e-07 | ||
| 3jpv_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-07 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 2e-07 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 2e-07 | ||
| 3cxw_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-07 | ||
| 1xws_A | 313 | Crystal Structure Of The Human Pim1 Kinase Domain L | 2e-07 | ||
| 2bil_B | 313 | The Human Protein Kinase Pim1 In Complex With Its C | 2e-07 | ||
| 3cy3_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-07 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 2e-07 | ||
| 3ma3_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-07 | ||
| 2j2i_B | 312 | Crystal Structure Of The Humab Pim1 In Complex With | 2e-07 | ||
| 3n9x_A | 432 | Crystal Structure Of Map Kinase From Plasmodium Ber | 2e-07 | ||
| 4alv_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 2e-07 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 2e-07 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 2e-07 | ||
| 3dcv_A | 328 | Crystal Structure Of Human Pim1 Kinase Complexed Wi | 2e-07 | ||
| 2bik_B | 313 | Human Pim1 Phosphorylated On Ser261 Length = 313 | 2e-07 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 2e-07 | ||
| 2obj_A | 333 | Crystal Structure Of Human Pim-1 Kinase In Complex | 3e-07 | ||
| 3a99_A | 320 | Structure Of Pim-1 Kinase Crystallized In The Prese | 3e-07 | ||
| 3sdj_A | 448 | Structure Of Rnase-Inactive Point Mutant Of Oligome | 3e-07 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 3e-07 | ||
| 3fbv_A | 448 | Crystal Structure Of The Oligomer Formed By The Kin | 3e-07 | ||
| 2zmd_A | 390 | Crystal Structure Of Human Mps1 Catalytic Domain T6 | 3e-07 | ||
| 3cek_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 3e-07 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 3e-07 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 3e-07 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 4e-07 | ||
| 2id5_A | 477 | Crystal Structure Of The Lingo-1 Ectodomain Length | 4e-07 | ||
| 1yhs_A | 273 | Crystal Structure Of Pim-1 Bound To Staurosporine L | 4e-07 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 4e-07 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 4e-07 | ||
| 2x9e_A | 317 | Human Mps1 In Complex With Nms-P715 Length = 317 | 4e-07 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 4e-07 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 4e-07 | ||
| 2xix_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-1 Fro | 5e-07 | ||
| 3f2a_A | 300 | Crystal Structure Of Human Pim-1 In Complex With Da | 5e-07 | ||
| 1ywv_A | 293 | Crystal Structures Of Proto-Oncogene Kinase Pim1: A | 5e-07 | ||
| 4as0_A | 273 | Cyclometalated Phthalimides As Protein Kinase Inhib | 5e-07 | ||
| 4dtk_A | 276 | Novel And Selective Pan-Pim Kinase Inhibitor Length | 5e-07 | ||
| 3r00_A | 299 | The Discovery Of Novel Benzofuran-2-Carboxylic Acid | 5e-07 | ||
| 3jxw_A | 294 | Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4- | 5e-07 | ||
| 3c4e_A | 273 | Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7 | 5e-07 | ||
| 1xqz_A | 300 | Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut | 6e-07 | ||
| 4a7c_A | 308 | Crystal Structure Of Pim1 Kinase With Etp46546 Leng | 6e-07 | ||
| 2xj0_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-4 Fro | 6e-07 | ||
| 2xiy_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-2 Fro | 6e-07 | ||
| 3uix_A | 298 | Crystal Structure Of Pim1 Kinase In Complex With Sm | 8e-07 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 8e-07 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 8e-07 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 8e-07 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 1e-06 | ||
| 3h9f_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 1e-06 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 1e-06 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 1e-06 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 1e-06 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 2e-06 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-06 | ||
| 2buj_A | 317 | Crystal Structure Of The Human Serine-Threonine Kin | 2e-06 | ||
| 2h34_A | 309 | Apoenzyme Crystal Structure Of The Tuberculosis Ser | 2e-06 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 2e-06 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 2e-06 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 2e-06 | ||
| 1w8a_A | 192 | Third Lrr Domain Of Drosophila Slit Length = 192 | 2e-06 | ||
| 4b8c_D | 727 | Nuclease Module Of The Yeast Ccr4-Not Complex Lengt | 2e-06 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 2e-06 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 2e-06 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 2e-06 | ||
| 4alu_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 3e-06 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 3e-06 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 3e-06 | ||
| 1tki_A | 321 | Autoinhibited Serine Kinase Domain Of The Giant Mus | 3e-06 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 3e-06 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-06 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 4e-06 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-06 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 4e-06 | ||
| 3rgf_A | 405 | Crystal Structure Of Human Cdk8CYCC Length = 405 | 4e-06 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 4e-06 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 4e-06 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 4e-06 | ||
| 3cig_A | 697 | Crystal Structure Of Mouse Tlr3 Ectodomain Length = | 4e-06 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 5e-06 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 5e-06 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 5e-06 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 5e-06 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 5e-06 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 5e-06 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 5e-06 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 5e-06 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 5e-06 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 5e-06 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 5e-06 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 5e-06 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 5e-06 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 5e-06 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 5e-06 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 5e-06 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 6e-06 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 7e-06 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 7e-06 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 7e-06 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 8e-06 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 9e-06 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 9e-06 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 1e-05 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 1e-05 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 1e-05 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 1e-05 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 1e-05 | ||
| 1xcd_A | 329 | Dimeric Bovine Tissue-Extracted Decorin, Crystal Fo | 1e-05 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 1e-05 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-05 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 1e-05 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 1e-05 | ||
| 1xku_A | 330 | Crystal Structure Of The Dimeric Protein Core Of De | 1e-05 | ||
| 3dls_A | 335 | Crystal Structure Of Human Pas Kinase Bound To Adp | 1e-05 | ||
| 3e6j_A | 229 | Crystal Structure Of Variable Lymphocyte Receptor ( | 2e-05 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 2e-05 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 2e-05 | ||
| 2a0z_A | 705 | The Molecular Structure Of Toll-like Receptor 3 Lig | 2e-05 | ||
| 1ziw_A | 680 | Human Toll-Like Receptor 3 Extracellular Domain Str | 2e-05 | ||
| 3ulu_A | 694 | Structure Of Quaternary Complex Of Human Tlr3ecd Wi | 2e-05 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 2e-05 | ||
| 3rfs_A | 272 | Design Of A Binding Scaffold Based On Variable Lymp | 3e-05 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 3e-05 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 4e-05 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 4e-05 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 4e-05 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 5e-05 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 5e-05 | ||
| 3v47_A | 455 | Crystal Structure Of The N-Tetminal Fragment Of Zeb | 5e-05 | ||
| 3v47_A | 455 | Crystal Structure Of The N-Tetminal Fragment Of Zeb | 1e-04 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 5e-05 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 5e-05 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 5e-05 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 6e-05 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 6e-05 | ||
| 1ozn_A | 285 | 1.5a Crystal Structure Of The Nogo Receptor Ligand | 7e-05 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 7e-05 | ||
| 1p8t_A | 285 | Crystal Structure Of Nogo-66 Receptor Length = 285 | 7e-05 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 7e-05 | ||
| 3a8w_A | 345 | Crystal Structure Of Pkciota Kinase Domain Length = | 7e-05 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 7e-05 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 8e-05 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 8e-05 | ||
| 3v44_A | 407 | Crystal Structure Of The N-Terminal Fragment Of Zeb | 9e-05 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 9e-05 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 9e-05 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 1e-04 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 1e-04 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 1e-04 | ||
| 2r9u_A | 174 | Crystal Structure Of Lamprey Variable Lymphocyte Re | 1e-04 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 1e-04 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 1e-04 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 1e-04 | ||
| 4f99_A | 361 | Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti | 1e-04 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 1e-04 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 1e-04 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 1e-04 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 1e-04 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 1e-04 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 1e-04 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 2e-04 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 2e-04 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 2e-04 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 2e-04 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 2e-04 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 2e-04 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 2e-04 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 2e-04 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 2e-04 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 2e-04 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 2e-04 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 2e-04 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 2e-04 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 2e-04 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 2e-04 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 2e-04 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 2e-04 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 2e-04 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 2e-04 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 2e-04 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 2e-04 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 2e-04 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 2e-04 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 2e-04 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 2e-04 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 2e-04 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 2e-04 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 2e-04 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 2e-04 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 2e-04 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 2e-04 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 2e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330 | Back alignment and structure |
|
| >pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331 | Back alignment and structure |
|
| >pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329 | Back alignment and structure |
|
| >pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352 | Back alignment and structure |
|
| >pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315 | Back alignment and structure |
|
| >pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327 | Back alignment and structure |
|
| >pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330 | Back alignment and structure |
|
| >pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361 | Back alignment and structure |
|
| >pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334 | Back alignment and structure |
|
| >pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342 | Back alignment and structure |
|
| >pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303 | Back alignment and structure |
|
| >pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309 | Back alignment and structure |
|
| >pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex Length = 462 | Back alignment and structure |
|
| >pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex Length = 462 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293 | Back alignment and structure |
|
| >pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299 | Back alignment and structure |
|
| >pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273 | Back alignment and structure |
|
| >pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291 | Back alignment and structure |
|
| >pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human) Recognition Complex Length = 466 | Back alignment and structure |
|
| >pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human) Recognition Complex Length = 466 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex Length = 466 | Back alignment and structure |
|
| >pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex Length = 466 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343 | Back alignment and structure |
|
| >pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271 | Back alignment and structure |
|
| >pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434 | Back alignment and structure |
|
| >pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314 | Back alignment and structure |
|
| >pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313 | Back alignment and structure |
|
| >pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313 | Back alignment and structure |
|
| >pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312 | Back alignment and structure |
|
| >pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432 | Back alignment and structure |
|
| >pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328 | Back alignment and structure |
|
| >pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320 | Back alignment and structure |
|
| >pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390 | Back alignment and structure |
|
| >pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain Length = 477 | Back alignment and structure |
|
| >pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300 | Back alignment and structure |
|
| >pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293 | Back alignment and structure |
|
| >pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273 | Back alignment and structure |
|
| >pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299 | Back alignment and structure |
|
| >pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294 | Back alignment and structure |
|
| >pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273 | Back alignment and structure |
|
| >pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300 | Back alignment and structure |
|
| >pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308 | Back alignment and structure |
|
| >pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317 | Back alignment and structure |
|
| >pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit Length = 192 | Back alignment and structure |
|
| >pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex Length = 727 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain Length = 697 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1 Length = 329 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin, The Archetypal Small Leucine-Rich Repeat Proteoglycan Length = 330 | Back alignment and structure |
|
| >pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335 | Back alignment and structure |
|
| >pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr) Rbc36 In Complex With H-Trisaccharide Length = 229 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand Binding Domain Length = 705 | Back alignment and structure |
|
| >pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure Length = 680 | Back alignment and structure |
|
| >pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With Three Fabs (Form1) Length = 694 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte Receptors Of Jawless Vertebrates By Module Engineering Length = 272 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish Tlr5 In Complex With Salmonella Flagellin Length = 455 | Back alignment and structure |
|
| >pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish Tlr5 In Complex With Salmonella Flagellin Length = 455 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding Domain Reveals A Convergent Recognition Scaffold Mediating Inhibition Of Myelination Length = 285 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor Length = 285 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish Tlr5 Length = 407 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor 2913 Ectodomain Length = 174 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 959 | |||
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-164 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-146 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-142 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-139 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-118 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-28 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 1e-137 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 1e-125 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 1e-114 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-106 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 6e-89 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 3e-82 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 5e-75 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 2e-96 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 9e-94 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 2e-92 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 2e-16 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 5e-86 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 4e-81 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 3e-65 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 3e-62 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 4e-40 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 2e-16 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 1e-83 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 2e-80 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 6e-76 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 7e-69 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 2e-60 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 3e-56 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 2e-10 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 1e-83 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 7e-79 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 4e-62 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 2e-57 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 8e-05 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 5e-83 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 8e-63 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 4e-41 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 7e-83 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 6e-72 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 6e-57 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 2e-53 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 3e-35 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 3e-64 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 7e-63 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 4e-62 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 5e-62 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 7e-60 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 9e-59 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 1e-58 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 2e-58 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 5e-58 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 6e-57 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 6e-57 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 3e-56 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 3e-56 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 4e-44 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 2e-38 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 3e-38 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 4e-36 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 1e-25 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 1e-55 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 4e-55 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 2e-53 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 7e-53 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 3e-51 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 3e-44 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 6e-43 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-54 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 4e-54 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-42 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-39 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-31 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 7e-53 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 6e-52 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 5e-47 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 3e-44 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 3e-51 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 2e-45 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 3e-36 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 7e-29 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 4e-51 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 6e-51 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 7e-47 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 7e-46 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 6e-30 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 1e-46 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 6e-44 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 1e-43 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 7e-42 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 3e-41 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 3e-37 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 2e-36 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 3e-34 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 2e-30 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 2e-43 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 2e-41 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 6e-34 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 5e-22 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 7e-21 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 2e-43 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 3e-40 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 4e-38 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 3e-21 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 1e-42 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 1e-42 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 2e-42 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 3e-38 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 9e-17 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 5e-05 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 3e-42 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 9e-42 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 1e-41 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 2e-41 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 2e-41 | |
| 3v5q_A | 297 | NT-3 growth factor receptor; kinase domain, kinase | 2e-41 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 3e-41 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 3e-41 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 6e-41 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 6e-41 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 2e-32 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 4e-31 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-26 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 6e-23 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 7e-41 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 8e-41 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 1e-40 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 1e-40 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 1e-40 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 2e-40 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 2e-40 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 2e-40 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 2e-40 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 3e-40 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 4e-40 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 5e-40 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 6e-40 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 8e-40 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 9e-40 | |
| 3zzw_A | 289 | Tyrosine-protein kinase transmembrane receptor RO; | 2e-39 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 3e-39 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 3e-39 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 4e-39 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 4e-39 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 5e-39 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 8e-39 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 8e-39 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 1e-38 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 2e-38 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 3e-38 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 3e-38 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 3e-38 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 4e-38 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 8e-38 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 2e-37 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 6e-29 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 2e-25 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 8e-38 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 9e-38 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 1e-37 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 1e-37 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 1e-37 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 4e-37 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 1e-06 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 4e-37 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 6e-37 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 6e-37 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 4e-33 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 5e-30 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 1e-26 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 7e-23 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 7e-37 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 8e-37 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 1e-36 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 1e-36 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 5e-36 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 5e-36 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 1e-31 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 6e-29 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 3e-22 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 3e-14 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 2e-35 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 5e-35 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 4e-32 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 6e-30 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 2e-24 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 1e-13 | |
| 4apc_A | 350 | Serine/threonine-protein kinase NEK1; transferase; | 8e-35 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 1e-34 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 1e-34 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 5e-34 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 2e-33 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 3e-33 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 3e-33 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 4e-33 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 5e-33 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 1e-32 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 1e-32 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 3e-32 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 4e-32 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 5e-32 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 2e-31 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 6e-31 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 4e-24 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 5e-32 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 6e-32 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 7e-32 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 1e-31 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 3e-31 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 4e-31 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 1e-29 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 6e-28 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 4e-23 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 1e-13 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 7e-31 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 1e-30 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 3e-24 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 3e-12 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 4e-05 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 2e-30 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 3e-30 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 3e-30 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 5e-24 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 5e-23 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 1e-20 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 4e-30 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 4e-30 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 6e-30 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 7e-30 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 7e-30 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 7e-30 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 1e-29 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 1e-29 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 2e-29 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 3e-29 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-24 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 3e-18 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-08 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 8e-07 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 3e-29 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 4e-29 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 2e-24 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 2e-22 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 2e-21 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 7e-15 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 1e-12 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 8e-05 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 4e-29 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 6e-29 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 7e-29 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 1e-28 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 2e-28 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 5e-23 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 4e-19 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 4e-09 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 8e-29 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 2e-28 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 2e-28 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 3e-28 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 4e-28 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 4e-28 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 4e-28 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 6e-28 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 6e-28 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 2e-27 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 7e-22 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 4e-18 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 9e-11 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 9e-28 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 2e-27 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 2e-26 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 6e-24 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 1e-19 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 4e-18 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 1e-09 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 1e-27 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 3e-27 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 3e-27 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 3e-27 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 5e-27 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 7e-27 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 8e-27 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 9e-27 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 1e-26 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 2e-26 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 2e-26 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 4e-26 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 8e-26 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 1e-25 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 2e-24 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 6e-23 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 4e-21 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 7e-18 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 7e-17 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 8e-15 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 8e-26 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 1e-25 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 2e-25 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 4e-25 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 4e-25 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 6e-25 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 8e-25 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 1e-24 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 1e-24 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 1e-24 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 3e-24 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 7e-24 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 7e-23 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-20 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 5e-20 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 6e-16 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 6e-16 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 9e-14 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 1e-23 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 1e-23 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 1e-23 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 2e-23 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 2e-05 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 2e-23 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 3e-23 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 3e-23 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 4e-22 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 5e-21 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 1e-18 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 2e-15 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 4e-07 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 4e-23 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 5e-23 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 5e-23 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 5e-23 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 1e-20 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 7e-18 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 8e-09 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 6e-23 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 6e-23 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 2e-22 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 2e-21 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 2e-20 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 2e-20 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 2e-15 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 8e-23 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 7e-22 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 4e-20 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 1e-14 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 4e-10 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 7e-08 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 1e-22 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 1e-22 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 1e-22 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 2e-22 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 2e-22 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 2e-22 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 2e-22 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 2e-22 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 4e-22 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 5e-22 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 5e-22 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 5e-22 | |
| 1uu3_A | 310 | HPDK1, 3-phosphoinositide dependent protein kinase | 8e-22 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 8e-22 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 8e-22 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 1e-21 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 2e-21 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 2e-21 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 2e-21 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 2e-21 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 3e-21 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 3e-21 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 1e-19 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 3e-18 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 4e-15 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 3e-13 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 4e-05 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 4e-21 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 6e-21 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 6e-21 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 6e-21 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 8e-21 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 9e-21 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 2e-20 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 3e-20 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 4e-17 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 2e-12 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 5e-12 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 8e-11 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 6e-09 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 3e-20 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 3e-20 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 5e-20 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 6e-20 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 2e-18 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 2e-15 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 3e-08 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 3e-04 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 1e-19 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 1e-19 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 1e-19 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 1e-19 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 1e-19 | |
| 3pvu_A | 695 | Beta-adrenergic receptor kinase 1; transferase, se | 1e-19 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 2e-19 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 3e-19 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 4e-19 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 5e-19 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 6e-19 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 7e-19 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 7e-19 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 8e-19 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 1e-18 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 8e-13 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 3e-10 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 9e-08 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 6e-06 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 5e-04 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 1e-18 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 1e-18 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 2e-18 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 2e-18 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 2e-18 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 5e-18 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 9e-18 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 1e-17 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 2e-17 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 5e-14 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 1e-13 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 3e-08 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 2e-06 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 1e-17 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 3e-17 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 6e-17 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 2e-11 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 4e-11 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 2e-05 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 3e-17 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 3e-17 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 5e-15 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 7e-12 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 1e-10 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 4e-17 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 4e-17 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 7e-17 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 3e-16 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 3e-15 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 6e-12 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 8e-10 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 1e-04 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 2e-04 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 2e-04 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 8e-17 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 1e-16 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 2e-16 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 6e-16 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 2e-15 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 5e-12 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 2e-11 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 2e-16 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-16 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 3e-15 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-13 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 1e-11 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-10 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-07 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 7e-05 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 3e-16 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 5e-16 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 5e-16 | |
| 3g51_A | 325 | Ribosomal protein S6 kinase alpha-3; N-terminal ki | 7e-16 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 8e-16 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 1e-11 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 9e-16 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 1e-15 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 1e-15 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 3e-15 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 7e-14 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 5e-11 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 4e-06 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 9e-06 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 9e-06 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 3e-15 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 6e-15 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 2e-13 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 4e-08 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 6e-08 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 8e-05 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 4e-15 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 4e-15 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 1e-12 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 4e-12 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 3e-07 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 7e-05 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 9e-15 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 1e-14 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 5e-14 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 6e-14 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 6e-14 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 2e-12 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 7e-10 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 5e-09 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 1e-06 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 1e-13 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 1e-13 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 2e-13 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 2e-13 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 2e-13 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 3e-13 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 4e-10 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 3e-07 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 1e-12 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 2e-10 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 2e-09 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 3e-04 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 1e-12 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 1e-08 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 2e-07 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 3e-07 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 5e-07 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 3e-06 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 1e-05 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 6e-05 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 7e-05 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 1e-04 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 2e-04 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 2e-12 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 2e-12 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 6e-12 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 9e-12 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 2e-11 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 4e-09 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 1e-11 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 2e-10 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 5e-09 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 7e-08 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 2e-05 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 1e-04 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 5e-04 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 3e-11 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 7e-11 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 9e-11 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 2e-05 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 1e-04 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 2e-04 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 7e-04 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 1e-10 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 2e-10 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 2e-10 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 3e-10 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 1e-08 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 8e-08 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 5e-04 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 8e-10 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 2e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 3e-09 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 3e-09 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 3e-04 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 3e-09 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 5e-09 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 1e-08 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 1e-08 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 1e-06 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-06 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-06 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-06 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 1e-05 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 3e-04 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 4e-04 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 2e-08 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 3e-08 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 3e-08 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 7e-08 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-06 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 5e-06 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 7e-06 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 3e-05 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 1e-04 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 7e-04 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 7e-04 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 6e-07 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 3e-06 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 3e-06 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 6e-05 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 7e-05 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 7e-05 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 9e-05 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 1e-04 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 2e-04 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 2e-06 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 4e-06 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 5e-06 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 1e-04 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 5e-06 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 6e-06 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 8e-06 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 3e-05 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 2e-04 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 5e-04 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 6e-04 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 5e-05 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 6e-05 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 1e-04 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 7e-05 |
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 498 bits (1285), Expect = e-164
Identities = 174/588 (29%), Positives = 270/588 (45%), Gaps = 32/588 (5%)
Query: 2 LSFNALSGSLPEELSDLPILTF-AAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
+S N +SG + +S L F N S +P LG+ + ++ L +S N+ G
Sbjct: 185 ISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSR 241
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTI-EGVFEKCSNLSQL 119
I C+ LK +++S+N G IP S L+ + L N TG I + + C L+ L
Sbjct: 242 AISTCTELKLLNISSNQFVGPIPPLPLKS--LQYLSLAENKFTGEIPDFLSGACDTLTGL 299
Query: 120 VIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPV-SIWNSETLMEFSAANNLLEGSL 177
+ NH YG++P + L L L SNNF+G +P+ ++ L + N G L
Sbjct: 300 DLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGEL 359
Query: 178 PYEVGNAAA-LERLVLTNNMLKGHLPKEIGN--LSALSVLDLNSNLFDGIIPYELGDCIS 234
P + N +A L L L++N G + + + L L L +N F G IP L +C
Sbjct: 360 PESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSE 419
Query: 235 LTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQH 294
L +L L N LSG IP + L++L+ L L N L G IP + + ++
Sbjct: 420 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ---------ELMYVKTLE- 469
Query: 295 HGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLT 354
L +N L+G IP L +C + + L+NN L+G+IP + RL NL L LS N +
Sbjct: 470 --TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 527
Query: 355 GPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKE 414
G IP+E GD L L L N G+IP ++ + N ++GK N
Sbjct: 528 GNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ----SGKIAANFIAGKRYVYIKNDGM 583
Query: 415 LTHLDLSFN--ELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSN 472
+ N E G L+ + + G F N+ + ++MS
Sbjct: 584 KKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNG--SMMFLDMSY 641
Query: 473 NLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMC 532
N+ G +P+ +G++ YL L+L N +G IP ++G+L L LD+S N+L G+IP+ M
Sbjct: 642 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 701
Query: 533 SLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNC 580
+L+ L + L+ N L G +P G + N LCG +
Sbjct: 702 ALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCD 749
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 452 bits (1166), Expect = e-146
Identities = 177/589 (30%), Positives = 250/589 (42%), Gaps = 38/589 (6%)
Query: 2 LSFNALSGSLPE--ELSDLPILTF-AAEKNQLSGSLP-SWLGNWNQMESLLLSSNQFIGK 57
LS N+LSG + L L F N L S N +E L LS+N G
Sbjct: 107 LSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGA 166
Query: 58 IPPEI---GNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCS 114
C LK +++S N +SG + + +LE +D+ N + I + CS
Sbjct: 167 NVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPFLG-DCS 223
Query: 115 NLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLL 173
L L I N + G +S L +L++ SN F G IP S L S A N
Sbjct: 224 ALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKS--LQYLSLAENKF 281
Query: 174 EGSLPYEV-GNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYE-LGD 231
G +P + G L L L+ N G +P G+ S L L L+SN F G +P + L
Sbjct: 282 TGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLK 341
Query: 232 CISLTTLDLGNNNLSGLIPEKIADL-AQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLS 290
L LDL N SG +PE + +L A L L LS NN SGPI Q L
Sbjct: 342 MRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN----LCQNPKNTLQ 397
Query: 291 FIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSR 350
L N +G IP L +C +V L L+ N LSG IP SL L+ L L L
Sbjct: 398 E------LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWL 451
Query: 351 NQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFG 410
N L G IP E L+ L L N LTG IP L + L ++L+ N+L+G++P G
Sbjct: 452 NMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 511
Query: 411 NLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPV-DELFSNSAAWKIATMN 469
L+ L L LS N G +P+ L + +L+ L L N +G + +F S
Sbjct: 512 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG-------K 564
Query: 470 MSNNLFDGGLPRSLGNLSYLTNLDLHEN--KFTGEIPPDLGNLMQLEYLDVSRNRLCGQI 527
++ N G + N N +F G L L +++ G
Sbjct: 565 IAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHT 624
Query: 528 PETMCSLSNLLYLSLAENRLEGMVPRS-GICQNLSKISLTGNKDLCGKI 575
T + ++++L ++ N L G +P+ G L ++L N + G I
Sbjct: 625 SPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHND-ISGSI 672
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 441 bits (1137), Expect = e-142
Identities = 172/608 (28%), Positives = 256/608 (42%), Gaps = 77/608 (12%)
Query: 2 LSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP- 60
LS + ++GS+ + SL LS N G +
Sbjct: 84 LSNSHINGSVSG------------------------FKCSASLTSLDLSRNSLSGPVTTL 119
Query: 61 -EIGNCSMLKSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNLLTGTIE---GVFEKCSN 115
+G+CS LK +++S+N L SLE +DL N ++G + + C
Sbjct: 120 TSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGE 179
Query: 116 LSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLE 174
L L I N I G + +S+ L LD+ SNNF+ IP + + L + N L
Sbjct: 180 LKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLS 236
Query: 175 GSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYEL-GDCI 233
G + L+ L +++N G +P L +L L L N F G IP L G C
Sbjct: 237 GDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACD 294
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293
+LT LDL N+ G +P + L+ L LS NN SG +P + M L +
Sbjct: 295 TLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP--MDTLL---KMRGLKVL- 348
Query: 294 HHGVFDLSYNRLSGPIPEELGSCVV-VVDLLLNNNMLSGKIPGSLSR--LTNLTTLDLSR 350
DLS+N SG +PE L + ++ L L++N SG I +L + L L L
Sbjct: 349 -----DLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQN 403
Query: 351 NQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFG 410
N TG IP + +L L+L N L+G+IP SLGSL L L L N L G++P
Sbjct: 404 NGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM 463
Query: 411 NLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNM 470
+K L L L FN+L G++PS LSN NL + L +N+L+G + + +A + +
Sbjct: 464 YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLE--NLAILKL 521
Query: 471 SNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLE---------------- 514
SNN F G +P LG+ L LDL+ N F G IP +
Sbjct: 522 SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKND 581
Query: 515 ------YLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS-GICQNLSKISLTG 567
+ + G E + LS ++ G + ++ + ++
Sbjct: 582 GMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSY 641
Query: 568 NKDLCGKI 575
N L G I
Sbjct: 642 NM-LSGYI 648
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 434 bits (1118), Expect = e-139
Identities = 169/596 (28%), Positives = 262/596 (43%), Gaps = 54/596 (9%)
Query: 3 SFNALSGSLPEELSDLPILTFAAEKNQLS--GSLPSWLG-----NW-------NQMESLL 48
+ S SL E+ L ++F K+ L LP W + +++ S+
Sbjct: 2 FQASPSQSLYREIHQL--ISF---KDVLPDKNLLPDWSSNKNPCTFDGVTCRDDKVTSID 56
Query: 49 LSSNQF---IGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGT 105
LSS + + + + L+S+ LSN+ ++GS+ S SL +DL N L+G
Sbjct: 57 LSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVS-GFKCSASLTSLDLSRNSLSGP 115
Query: 106 IEGVFE--KCSNLSQLVIFRNHIYGSIP-EYLSKLP-LMVLDLDSNNFTGIIPVSIW--- 158
+ + CS L L + N + KL L VLDL +N+ +G V
Sbjct: 116 VTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSD 175
Query: 159 NSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNS 218
L + + N + G + V LE L +++N +P +G+ SAL LD++
Sbjct: 176 GCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISG 232
Query: 219 NLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPS 278
N G + C L L++ +N G IP L LQ L L+ N +G IP
Sbjct: 233 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPD--- 287
Query: 279 SYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIP-GSL 337
F L+ + DLS N G +P GSC ++ L L++N SG++P +L
Sbjct: 288 --FLSGACDTLTGL------DLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTL 339
Query: 338 SRLTNLTTLDLSRNQLTGPIPSEFGD-SIKLQGLYLGNNQLTGSIPWSLG--SLGGLVKL 394
++ L LDLS N+ +G +P + S L L L +N +G I +L L +L
Sbjct: 340 LKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQEL 399
Query: 395 NLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVD 454
L N +GK+P + N EL L LSFN L G +PSSL ++ L L L N L G +
Sbjct: 400 YLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP 459
Query: 455 ELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLE 514
+ + T+ + N G +P L N + L + L N+ TGEIP +G L L
Sbjct: 460 QELMYVK--TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 517
Query: 515 YLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS--GICQNLSKISLTGN 568
L +S N G IP + +L++L L N G +P + ++ + G
Sbjct: 518 ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGK 573
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 378 bits (974), Expect = e-118
Identities = 151/498 (30%), Positives = 233/498 (46%), Gaps = 34/498 (6%)
Query: 87 CTSESLEEIDLDGNLLT---GTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLD 143
C + + IDL L + + L L + +HI GS+ + L LD
Sbjct: 47 CRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLD 106
Query: 144 LDSNNFTGIIP--VSIWNSETLMEFSAANNLLEGSLPYEVG-NAAALERLVLTNNMLKGH 200
L N+ +G + S+ + L + ++N L+ G +LE L L+ N + G
Sbjct: 107 LSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGA 166
Query: 201 LPKEI---GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLA 257
L L ++ N G + + C++L LD+ +NN S IP + D +
Sbjct: 167 NVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCS 223
Query: 258 QLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCV 317
LQ L +S N LSG S +L + ++S N+ GPIP +
Sbjct: 224 ALQHLDISGNKLSGDFSRAIS------TCTELKLL------NISSNQFVGPIPPLPLKSL 271
Query: 318 VVVDLLLNNNMLSGKIPGSLS-RLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQ 376
+ L N +G+IP LS LT LDLS N G +P FG L+ L L +N
Sbjct: 272 QYLS--LAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNN 329
Query: 377 LTGSIP-WSLGSLGGLVKLNLTGNKLSGKVPTSFGNLK-ELTHLDLSFNELDGQLPSSLS 434
+G +P +L + GL L+L+ N+ SG++P S NL L LDLS N G + +L
Sbjct: 330 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 389
Query: 435 NIL--NLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNL 492
L LYLQ+N +G + SN ++ ++++S N G +P SLG+LS L +L
Sbjct: 390 QNPKNTLQELYLQNNGFTGKIPPTLSN--CSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 447
Query: 493 DLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVP 552
L N GEIP +L + LE L + N L G+IP + + +NL ++SL+ NRL G +P
Sbjct: 448 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Query: 553 RS-GICQNLSKISLTGNK 569
+ G +NL+ + L+ N
Sbjct: 508 KWIGRLENLAILKLSNNS 525
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 1e-28
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 4/158 (2%)
Query: 1 MLSFNALSGSLPEELSDLPILTF---AAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGK 57
++ N ++G + + + A + G L + ++S + G
Sbjct: 564 KIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGH 623
Query: 58 IPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLS 117
P N + + +S N LSG IP+E+ + L ++L N ++G+I L+
Sbjct: 624 TSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN 683
Query: 118 QLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIP 154
L + N + G IP+ +S L L +DL +NN +G IP
Sbjct: 684 ILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 413 bits (1065), Expect = e-137
Identities = 123/289 (42%), Positives = 179/289 (61%), Gaps = 2/289 (0%)
Query: 668 RLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGH-REFTAEM 726
R +L + A++NF NI+G GGFG VYK L DG VAVK+L + +TQG +F E+
Sbjct: 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEV 78
Query: 727 ETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIAC 786
E + H+NL+ L G+C E+LLVY YM NGS+ LR R S L W KR +IA
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 787 GAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGT 846
G+ARGLA+LH P IIHRD+KA+NILL+EEFEA V DFGLA+L+ +THV+T + GT
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 198
Query: 847 FGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGP-EFKDIEGGNLVGWVFQKMKK 905
G+I PEY +G+S+ + DV+ +GV+LLEL+TG+ + + L+ WV +K+
Sbjct: 199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258
Query: 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954
+ ++D + + +++++A C +P RP M V++ L+
Sbjct: 259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 381 bits (980), Expect = e-125
Identities = 117/311 (37%), Positives = 167/311 (53%), Gaps = 5/311 (1%)
Query: 647 SSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTV 706
++ S + + R+ LV + EATNNF +IG G FG VYK L DG V
Sbjct: 7 KATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV 66
Query: 707 AVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWL 766
A+K+ + +QG EF E+ETL +H +LV L+G+C E +L+Y+YM NG+L L
Sbjct: 67 ALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL 126
Query: 767 RNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADF 826
+ W++R +I GAARGL +LH T IIHRD+K+ NILL+E F K+ DF
Sbjct: 127 YGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDF 183
Query: 827 GLARLISAC-ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGP 885
G+++ + +TH+ST + GT GYI PEY GR T + DVYSFGV+L E++ +
Sbjct: 184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQ 243
Query: 886 EFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT 945
E NL W + GQ ++DP + + K A CL+ + RP+
Sbjct: 244 S-LPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPS 302
Query: 946 MLHVLKFLKEI 956
M VL L+
Sbjct: 303 MGDVLWKLEYA 313
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 353 bits (907), Expect = e-114
Identities = 109/303 (35%), Positives = 157/303 (51%), Gaps = 22/303 (7%)
Query: 666 LMRLTLVHILEATNNF------CKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKT--- 716
+ + TNNF N +G+GGFG VYK + + TVAVKKL+
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITT 70
Query: 717 -QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEV 775
+ ++F E++ + K +H+NLV LLG+ S ++ LVY YM NGSL L G+
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT-PP 129
Query: 776 LGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI-SA 834
L W R KIA GAA G+ FLH H IHRDIK++NILL+E F AK++DFGLAR
Sbjct: 130 LSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGN 894
+T +++ I GT Y+ PE G T + D+YSFGV+LLE++TG + E
Sbjct: 187 AQTVMTSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVD---EHREPQL 242
Query: 895 LVGWVFQKMK-KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFL 953
L+ + + D +D + + M +A CL + RP + V + L
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
Query: 954 KEI 956
+E+
Sbjct: 302 QEM 304
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 342 bits (880), Expect = e-106
Identities = 121/597 (20%), Positives = 215/597 (36%), Gaps = 31/597 (5%)
Query: 2 LSFNALSGSLPEELSDLPILTF-AAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
L+ N L + LT N +S P ++ L L N+
Sbjct: 32 LTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDK 91
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
C+ L + L +N + ++L +DL N L+ T G + NL +L+
Sbjct: 92 TFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELL 151
Query: 121 IFRNHIYGSIPEYLSKLP---LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSL 177
+ N I E L L L+L SN P L N L SL
Sbjct: 152 LSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSL 211
Query: 178 PYEVGNAAA---LERLVLTNNMLKGHLPKEIGNL--SALSVLDLNSNLFDGIIPYELGDC 232
++ A + L L+N+ L L + L++LDL+ N + +
Sbjct: 212 TEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWL 271
Query: 233 ISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFI 292
L L NN+ L + L ++ L L + I + L +
Sbjct: 272 PQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCL 331
Query: 293 QHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLS----RLTNLTTLDL 348
+H ++ N + G + + L L+N+ S + + + + L L+L
Sbjct: 332 EH---LNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNL 388
Query: 349 SRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIP-WSLGSLGGLVKLNLTGNKLSGKVPT 407
++N+++ F L+ L LG N++ + L + ++ L+ NK
Sbjct: 389 TKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRN 448
Query: 408 SFGNLKELTHLDLSFNELDG--QLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKI 465
SF + L L L L PS + NL L L +N ++ D++ K+
Sbjct: 449 SFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLE--KL 506
Query: 466 ATMNMSNN--------LFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLD 517
+++ +N GG L LS+L L+L N F +L +L+ +D
Sbjct: 507 EILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIID 566
Query: 518 VSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS--GICQNLSKISLTGNKDLC 572
+ N L + +L L+L +N + + + +NL+++ + N C
Sbjct: 567 LGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDC 623
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 297 bits (763), Expect = 6e-89
Identities = 119/573 (20%), Positives = 201/573 (35%), Gaps = 70/573 (12%)
Query: 28 NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELC 87
+L+ +P L + L L+ NQ S L S+ + N +S P
Sbjct: 14 LKLT-QVPDDLPT--NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQ 70
Query: 88 TSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDS 146
L+ ++L N L+ + F C+NL++L + N I K L+ LDL
Sbjct: 71 KLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSH 130
Query: 147 NNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIG 206
N + + E L+ L+L+NN ++ +E+
Sbjct: 131 NGLSSTKLGTQVQLE------------------------NLQELLLSNNKIQALKSEELD 166
Query: 207 --NLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIAD---LAQLQC 261
S+L L+L+SN P L L L N L + EK+ ++
Sbjct: 167 IFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRN 226
Query: 262 LVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVD 321
L LS++ LS + F +L+ + DLSYN L+ + +
Sbjct: 227 LSLSNSQLSTTSN----TTFLGLKWTNLT------MLDLSYNNLNVVGNDSFAWLPQLEY 276
Query: 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRN---------QLTGPIPSEFGDSIKLQGLYL 372
L N + SL L N+ L+L R+ L F L+ L +
Sbjct: 277 FFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNM 336
Query: 373 GNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTS--FGNLKE--LTHLDLSFNELDGQ 428
+N + G L L L+L+ + S + T+ F +L L L+L+ N++
Sbjct: 337 EDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKI 396
Query: 429 LPSSLSNILNLVGLYLQHNKLSGPVD-ELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLS 487
+ S + +L L L N++ + + + I + +S N + S +
Sbjct: 397 ESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLE--NIFEIYLSYNKYLQLTRNSFALVP 454
Query: 488 YLTNLDLHENKFTG--EIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAEN 545
L L L P L L LD+S N + + + L L L L N
Sbjct: 455 SLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHN 514
Query: 546 RLEGMVPRS---------GICQNLSKISLTGNK 569
L + + +L ++L N
Sbjct: 515 NLARLWKHANPGGPIYFLKGLSHLHILNLESNG 547
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 279 bits (715), Expect = 3e-82
Identities = 119/567 (20%), Positives = 188/567 (33%), Gaps = 77/567 (13%)
Query: 2 LSFNALSGSLPEELSDLP---ILTFAAEKNQLSGSLPSWLGNWNQM--ESLLLSSNQFIG 56
LS N LS + L L + N++ L + + L LSSNQ
Sbjct: 128 LSHNGLSSTKLGTQVQLENLQELLLS--NNKIQALKSEELDIFANSSLKKLELSSNQIKE 185
Query: 57 KIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSE---SLEEIDLDGNLLTGTIEGVFE-- 111
P L + L+N L S+ +LC S+ + L + L+ T F
Sbjct: 186 FSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGL 245
Query: 112 KCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAAN 170
K +NL+ L + N++ + + LP L L+ NN + S+ + +
Sbjct: 246 KWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKR 305
Query: 171 NLLEGSL---------PYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLF 221
+ + S+ + LE L + +N + G L L L L+++
Sbjct: 306 SFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFT 365
Query: 222 DGIIPYELG----DCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKP 277
L L+L N +S + + + L L+ L L N + + +
Sbjct: 366 SLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQE 425
Query: 278 SSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSG--KIPG 335
+ ++ I LSYN+ + L+L L P
Sbjct: 426 WR-----GLENIFEI------YLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPS 474
Query: 336 SLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLT--------GSIPWSLGS 387
L NLT LDLS N + KL+ L L +N L G + L
Sbjct: 475 PFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKG 534
Query: 388 LGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHN 447
L L LNL N F +L EL +DL N L+ S +N ++L L LQ N
Sbjct: 535 LSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKN 594
Query: 448 KLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDL 507
++ ++F LT LD+ N F
Sbjct: 595 LITSVEKKVFG-------------------------PAFRNLTELDMRFNPFDCTCESIA 629
Query: 508 G-----NLMQLEYLDVSRNRLCGQIPE 529
N ++S + LC P
Sbjct: 630 WFVNWINETHTNIPELSSHYLCNTPPH 656
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 259 bits (664), Expect = 5e-75
Identities = 106/524 (20%), Positives = 173/524 (33%), Gaps = 86/524 (16%)
Query: 68 LKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIY 127
+ S+ L+ +P +L ++ ++L N L F + S L+ L + N I
Sbjct: 6 HEVADCSHLKLT-QVPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTIS 62
Query: 128 GSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAA 186
PE KLP L VL+L N + +
Sbjct: 63 KLEPELCQKLPMLKVLNLQHNELSQLSD-------------------------------- 90
Query: 187 LERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLS 246
K + L+ L L SN I +L TLDL +N LS
Sbjct: 91 ----------------KTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLS 134
Query: 247 GLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLS 306
L LQ L+LS+N + L +LS N++
Sbjct: 135 STKLGTQVQLENLQELLLSNNKIQALKS----EELDIFANSSLK------KLELSSNQIK 184
Query: 307 GPIPEELGSCVVVVDLLLNNNMLSGKIPGSLS---RLTNLTTLDLSRNQLTGPIPSEFG- 362
P + + L LNN L + L T++ L LS +QL+ + F
Sbjct: 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLG 244
Query: 363 -DSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLS 421
L L L N L S L L L N + S L + +L+L
Sbjct: 245 LKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLK 304
Query: 422 FNELDGQL---------PSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSN 472
+ + S + L L ++ N + G +F+ + +++SN
Sbjct: 305 RSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLI--NLKYLSLSN 362
Query: 473 NLF-----DGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQI 527
+ SL + S L L+L +NK + L LE LD+ N + ++
Sbjct: 363 SFTSLRTLTNETFVSLAH-SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 421
Query: 528 PETM-CSLSNLLYLSLAENRLEGMVPRS-GICQNLSKISLTGNK 569
L N+ + L+ N+ + S + +L ++ L
Sbjct: 422 TGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVA 465
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 316 bits (811), Expect = 2e-96
Identities = 94/597 (15%), Positives = 192/597 (32%), Gaps = 63/597 (10%)
Query: 22 TFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSG- 80
F E + L + ++ L L G++P IG + L+ ++L ++
Sbjct: 61 NFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVN 120
Query: 81 ---SIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL 137
P+ + + S E+ T +
Sbjct: 121 ERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSD-------------------- 160
Query: 138 PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNML 197
L+ ++S+ I S + + +N + + V L + + N+
Sbjct: 161 -LIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNIT-FVSKAVMRLTKLRQFYMGNSPF 218
Query: 198 KGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLA 257
E + + LT +++ N +P + L
Sbjct: 219 VAENICEAWENENSEYAQQY-----KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALP 273
Query: 258 QLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRL-SGPIPEELGSC 316
++Q + ++ N + A+ P IQ + + YN L + P+ L
Sbjct: 274 EMQLINVACNRGIS-GEQLKDDWQALADAPVGEKIQ---IIYIGYNNLKTFPVETSLQKM 329
Query: 317 VVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQ 376
+ L N L GK+P + L +L+L+ NQ+T + G + +++ L +N+
Sbjct: 330 KKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNK 388
Query: 377 LTG-SIPWSLGSLGGLVKLNLTGNKLSG-------KVPTSFGNLKELTHLDLSFNELDGQ 428
L + S+ + ++ + N++ + + ++ ++LS N++
Sbjct: 389 LKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKF 448
Query: 429 LPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAW-----KIATMNMSNNLFDGGLPRSL 483
S L + L N L+ + + ++++ N L
Sbjct: 449 PKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKL-TKLSDDF 507
Query: 484 --GNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYL------DVSRNRLCGQIPETMCSLS 535
L YL +DL N F+ P N L+ D NR + PE +
Sbjct: 508 RATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCP 566
Query: 536 NLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTFGKLALLH 592
+L L + N + V I N+S + + N + C G L +
Sbjct: 567 SLTQLQIGSNDIRK-VNEK-ITPNISVLDIKDNP-NISIDLSYVCPYIEAGMYMLFY 620
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 309 bits (793), Expect = 9e-94
Identities = 100/610 (16%), Positives = 190/610 (31%), Gaps = 117/610 (19%)
Query: 2 LSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIG----K 57
L SG +P+ + L ++E L L S+
Sbjct: 88 LEGFGASGRVPDAIGQLT-----------------------ELEVLALGSHGEKVNERLF 124
Query: 58 IPPEIGNCSMLKSISLSNNFLSGSIPREL--CTSESLEEIDLDGNLLTGTIEGVFEKCSN 115
P I + + L + ++ + +I+
Sbjct: 125 GPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLK 184
Query: 116 LSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLE 174
+Q+ N+I + + + +L L + ++ F W +E
Sbjct: 185 DTQIGQLSNNI-TFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENS-----EYAQQY 238
Query: 175 GSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGI--------IP 226
+ + N L + + N LP + L + ++++ N
Sbjct: 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQAL 298
Query: 227 YELGDCISLTTLDLGNNNLSGL-IPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQAN 285
+ + + +G NNL + + + +L L +N L G +P+ F +
Sbjct: 299 ADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPA-----F--GS 351
Query: 286 MPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIP--GSLSRLTNL 343
L+ +L+YN+++ G V +L +N L IP ++ +
Sbjct: 352 EIKLA------SLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKY-IPNIFDAKSVSVM 404
Query: 344 TTLDLSRNQLTG-------PIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNL 396
+ +D S N++ P+ I + + L NNQ++ + L +NL
Sbjct: 405 SAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINL 464
Query: 397 TGNKLSG-------KVPTSFGNLKELTHLDLSFNELDGQLPSSL--SNILNLVGLYLQHN 447
GN L+ +F N LT +DL FN+L L + + LVG+ L +N
Sbjct: 465 MGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYLVGIDLSYN 523
Query: 448 KLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLT------NLDLHENKFTG 501
S P N S L D N+
Sbjct: 524 SFS---------------------------KFPTQPLNSSTLKGFGIRNQRDAQGNRTLR 556
Query: 502 EIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQ--N 559
E P + L L + N + ++ E + N+ L + +N + S +C
Sbjct: 557 EWPEGITLCPSLTQLQIGSNDI-RKVNEKI--TPNISVLDIKDNPNISI-DLSYVCPYIE 612
Query: 560 LSKISLTGNK 569
L +K
Sbjct: 613 AGMYMLFYDK 622
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 305 bits (783), Expect = 2e-92
Identities = 78/573 (13%), Positives = 169/573 (29%), Gaps = 86/573 (15%)
Query: 2 LSFNALSG----SLPEELSDLPILT-FAAEKNQLSGSLPSWLGNWN--QMESLLLSSNQF 54
L + P+ +S + + + + + ++S+
Sbjct: 112 LGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQ 171
Query: 55 IGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCS 114
I I +N ++ + + + L + + + +
Sbjct: 172 QKSIKKSSRITLKDTQIGQLSNNIT-FVSKAVMRLTKLRQFYMGNSPFVAENICEAWENE 230
Query: 115 NLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLL 173
N Y + L L +++ + +P + + + A N
Sbjct: 231 NSEY-----AQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRG 285
Query: 174 --------EGSLPYEVGNAAALERLVLTNNMLK-GHLPKEIGNLSALSVLDLNSNLFDGI 224
+ + ++ + + N LK + + + L +L+ N +G
Sbjct: 286 ISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGK 345
Query: 225 IPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQA 284
+P G I L +L+L N ++ + Q++ L +HN L IP+
Sbjct: 346 LP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKY-IPN--------- 394
Query: 285 NMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLT 344
+ D + D SYN + + + + + N++
Sbjct: 395 -IFDAKSVSVMSAIDFSYNEIGSVDGKNFDP-----------------LDPTPFKGINVS 436
Query: 345 TLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTG-------SIPWSLGSLGGLVKLNLT 397
+++LS NQ++ F L + L N LT + + L ++L
Sbjct: 437 SINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLR 496
Query: 398 GNKLSGKVPTS--FGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDE 455
NKL+ + L L +DLS+N P+ N L G +++ +
Sbjct: 497 FNKLTK-LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQR------- 547
Query: 456 LFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEY 515
+ N P + LT L + N + + +
Sbjct: 548 -------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDIRK-VNEKI--TPNISV 591
Query: 516 LDVSRNRLCGQIPETMCSLSNLLYLSLAENRLE 548
LD+ N +C L ++ +
Sbjct: 592 LDIKDNPNISIDLSYVCPYIEAGMYMLFYDKTQ 624
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 2e-16
Identities = 34/190 (17%), Positives = 52/190 (27%), Gaps = 42/190 (22%)
Query: 2 LSFNALSGSLPEELSDLPILTF-AAEKNQLSG-------SLPSWLGNWNQMESLLLSSNQ 53
LS N +S E S L+ N L+ N + S+ L N+
Sbjct: 440 LSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNK 499
Query: 54 F------------------------IGKIPPEIGNCSMLKSISLSN------NFLSGSIP 83
K P + N S LK + N N P
Sbjct: 500 LTKLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWP 559
Query: 84 RELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVL 142
+ SL ++ + N + E + N+S L I N Y+ +
Sbjct: 560 EGITLCPSLTQLQIGSNDIRKVNEKIT---PNISVLDIKDNPNISIDLSYVCPYIEAGMY 616
Query: 143 DLDSNNFTGI 152
L + I
Sbjct: 617 MLFYDKTQDI 626
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 287 bits (736), Expect = 5e-86
Identities = 108/590 (18%), Positives = 178/590 (30%), Gaps = 92/590 (15%)
Query: 2 LSFNALSGSLPEELSDLPILTF-AAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
LSFN L P L + ++ + + + +L+L+ N
Sbjct: 35 LSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALG 94
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEG-VFEKCSNLSQL 119
S L+ + L+ + ++L+E+++ NL+ F +NL L
Sbjct: 95 AFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 154
Query: 120 VIFRNHIYGSIPEYLSKLP-----LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLE 174
+ N I L L + LDL N I P +
Sbjct: 155 DLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIR------------- 201
Query: 175 GSLPYEVGNAAALERLVLTNNMLKGHLPKE-IGNLSALSVLDLNSNLFDGIIPYELGD-- 231
L +L L NN ++ K I L+ L V L F E D
Sbjct: 202 ------------LHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKS 249
Query: 232 -CISLTTLDLGNNNLSGL------IPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQA 284
L L + L+ L I + L + L + +
Sbjct: 250 ALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDF--------S 301
Query: 285 NMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLT 344
+ +L + +L S L G S L +L
Sbjct: 302 YNFGWQHL------ELVNCKFGQFPTLKLKSL-----KRLTFTSNKGGNAFSEVDLPSLE 350
Query: 345 TLDLSRNQLT--GPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLS 402
LDLSRN L+ G + L+ L L N + + + L L L+ + L
Sbjct: 351 FLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLK 409
Query: 403 GKVPTS-FGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSA 461
S F +L+ L +LD+S + + +L L + N
Sbjct: 410 QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF-------- 461
Query: 462 AWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRN 521
LP L LT LDL + + P +L L+ L++S N
Sbjct: 462 -----------------LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 504
Query: 522 RLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS--GICQNLSKISLTGNK 569
L++L L + N + + +L+ ++LT N
Sbjct: 505 NFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQND 554
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 274 bits (702), Expect = 4e-81
Identities = 110/554 (19%), Positives = 184/554 (33%), Gaps = 56/554 (10%)
Query: 28 NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELC 87
++ +LP ++L LS N + L+ + LS +
Sbjct: 20 YKIPDNLPFST------KNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQ 73
Query: 88 TSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDS 146
+ L + L GN + G F S+L +LV ++ + L L L++
Sbjct: 74 SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAH 133
Query: 147 NNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIG 206
N LP N LE L L++N ++ ++
Sbjct: 134 NLIQSF-----------------------KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 170
Query: 207 NLSALSV----LDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEK-IADLAQLQC 261
L + + LDL+ N + I P I L L L NN S + + I LA L+
Sbjct: 171 VLHQMPLLNLSLDLSLNPMNFIQP-GAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEV 229
Query: 262 LVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLS-GPIPEELGSCVVVV 320
L + + +L+ + F L+Y I + V
Sbjct: 230 HRLVLGEFRNEGNLEKFDKSALEGLCNLTIEE----FRLAYLDYYLDDIIDLFNCLTNVS 285
Query: 321 DLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGS 380
L + + S L+L + + L G
Sbjct: 286 SFSLVSVTIER--VKDFSYNFGWQHLELVNCKFGQFPTLKL-----KSLKRLTFTSNKGG 338
Query: 381 IPWSLGSLGGLVKLNLTGNKLS--GKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILN 438
+S L L L+L+ N LS G S L +LDLSFN + + S+ +
Sbjct: 339 NAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQ 397
Query: 439 LVGLYLQHNKLSGPVD-ELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHEN 497
L L QH+ L + +F + + +++S+ LS L L + N
Sbjct: 398 LEHLDFQHSNLKQMSEFSVFLSL--RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN 455
Query: 498 KFTGEIPPD-LGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS-G 555
F PD L L +LD+S+ +L P SLS+L L+++ N +
Sbjct: 456 SFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYK 515
Query: 556 ICQNLSKISLTGNK 569
+L + + N
Sbjct: 516 CLNSLQVLDYSLNH 529
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 229 bits (587), Expect = 3e-65
Identities = 99/472 (20%), Positives = 158/472 (33%), Gaps = 41/472 (8%)
Query: 2 LSFNAL-SGSLPEELSDLPILTF-AAEKNQLSGSLPSWLGNWNQMESLLLS---SNQFIG 56
++ N + S LPE S+L L N++ + L +QM L LS S +
Sbjct: 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 190
Query: 57 KIPPEIGNCSMLKSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNLLTGTI---EGVFEK 112
I P L ++L NNF S ++ + LE L +
Sbjct: 191 FIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSA 250
Query: 113 CSNLSQLVIFRNHI------YGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLME 165
L L I + I + + L + L S + S +
Sbjct: 251 LEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFS--YNFGWQH 308
Query: 166 FSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDL--NSNLFDG 223
N ++ + L+RL T+N KG +L +L LDL N F G
Sbjct: 309 LELVNCKFGQFPTLKLKS---LKRLTFTSN--KGGNAFSEVDLPSLEFLDLSRNGLSFKG 363
Query: 224 IIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQ 283
SL LDL N + + L QL+ L H+NL S F
Sbjct: 364 CCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEF---SVFL- 418
Query: 284 ANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKI-PGSLSRLTN 342
++ +L ++ D+S+ + L + N P + L N
Sbjct: 419 -SLRNLIYL------DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN 471
Query: 343 LTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLS 402
LT LDLS+ QL P+ F LQ L + +N + L L L+ + N +
Sbjct: 472 LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 531
Query: 403 GKVPTSFGNL-KELTHLDLSFNELDGQLPSS--LSNILNLVGLYLQHNKLSG 451
+ L L+L+ N+ L I + L ++ ++
Sbjct: 532 TSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMEC 583
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 221 bits (566), Expect = 3e-62
Identities = 89/471 (18%), Positives = 156/471 (33%), Gaps = 53/471 (11%)
Query: 134 LSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLT 193
+ +P + NF I P ++ + + N L Y + L+ L L+
Sbjct: 4 VEVVPNITYQCMELNFYKI-PDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLS 60
Query: 194 NNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKI 253
++ +LS LS L L N + SL L NL+ L I
Sbjct: 61 RCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPI 120
Query: 254 ADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEEL 313
L L+ L ++HN + K YF +N+ +L + DLS N++ +L
Sbjct: 121 GHLKTLKELNVAHNLIQS---FKLPEYF--SNLTNLEHL------DLSSNKIQSIYCTDL 169
Query: 314 GSC----VVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK-LQ 368
++ + L L+ N ++ PG+ + L L L N + + + L+
Sbjct: 170 RVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLE 228
Query: 369 GLYLGNNQLTGSI---PWSLGSLGGLVKLNLTGNKLS------GKVPTSFGNLKELTHLD 419
L + + +L GL L + +L+ + F L ++
Sbjct: 229 VHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFS 288
Query: 420 LSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSN-----------------SAA 462
L ++ S L L + K +
Sbjct: 289 LVSVTIER--VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDL 346
Query: 463 WKIATMNMSNN--LFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSR 520
+ +++S N F G +S + L LDL N + + L QLE+LD
Sbjct: 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQH 405
Query: 521 NRLCGQIP-ETMCSLSNLLYLSLAENRLEGMVPRS-GICQNLSKISLTGNK 569
+ L SL NL+YL ++ +L + + GN
Sbjct: 406 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 456
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 4e-40
Identities = 59/288 (20%), Positives = 96/288 (33%), Gaps = 18/288 (6%)
Query: 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSI 381
+ N IP +L + LDLS N L F +LQ L L ++
Sbjct: 13 QCMELNFYK--IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIE 68
Query: 382 PWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVG 441
+ SL L L LTGN + +F L L L L + ++ L
Sbjct: 69 DGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKE 128
Query: 442 LYLQHNKL-SGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTN----LDLHE 496
L + HN + S + E FSN + +++S+N L L + LDL
Sbjct: 129 LNVAHNLIQSFKLPEYFSNLT--NLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186
Query: 497 NKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMC-SLSNLLYLSLAENRLEGM----V 551
N I P ++L L + N + +T L+ L L
Sbjct: 187 NPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEK 245
Query: 552 PRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTFGKLALLHAFGLAGL 599
+ L +++ + + + F L + +F L +
Sbjct: 246 FDKSALEGLCNLTIEEFRLAYLDYYLDDI-IDLFNCLTNVSSFSLVSV 292
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 2e-16
Identities = 30/149 (20%), Positives = 62/149 (41%), Gaps = 5/149 (3%)
Query: 2 LSFNALSGSL-PEELSDLPILTF-AAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIP 59
++ N+ + P+ ++L LTF + QL P+ + + ++ L +S N F
Sbjct: 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT 511
Query: 60 PEIGNCSMLKSISLSNNFLSGSIPRELCTSE-SLEEIDLDGNLLTGTIE--GVFEKCSNL 116
+ L+ + S N + S +EL SL ++L N T E + +
Sbjct: 512 FPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQ 571
Query: 117 SQLVIFRNHIYGSIPEYLSKLPLMVLDLD 145
QL++ + + P +P++ L++
Sbjct: 572 RQLLVEVERMECATPSDKQGMPVLSLNIT 600
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 271 bits (695), Expect = 1e-83
Identities = 88/360 (24%), Positives = 144/360 (40%), Gaps = 68/360 (18%)
Query: 225 IPYELGDCISL----TTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSY 280
I +LG+ +L T D N G++ + ++ L LS NL
Sbjct: 14 IKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPK--------- 64
Query: 281 FRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDL-LLNNNMLSGKIPGSLSR 339
PIP L + + L + N L G IP ++++
Sbjct: 65 -------------------------PYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAK 99
Query: 340 LTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGN 399
LT L L ++ ++G IP L L N L+G++P S+ SL LV + GN
Sbjct: 100 LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159
Query: 400 KLSGKVPTSFGNLKEL-THLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFS 458
++SG +P S+G+ +L T + +S N L G++P + +N LNL + L N L G
Sbjct: 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN-LNLAFVDLSRNMLEGD------ 212
Query: 459 NSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDV 518
G+ + L +N ++ +G L LD+
Sbjct: 213 --------------------ASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDL 251
Query: 519 SRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGS 578
NR+ G +P+ + L L L+++ N L G +P+ G Q + NK LCG + +
Sbjct: 252 RNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLPA 311
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 262 bits (673), Expect = 2e-80
Identities = 95/342 (27%), Positives = 151/342 (44%), Gaps = 51/342 (14%)
Query: 201 LPKEIGNLSALS----VLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSG--LIPEKIA 254
+ K++GN + LS D + + G++ + LDL NL IP +A
Sbjct: 14 IKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLA 73
Query: 255 DLAQLQCLVLSH-NNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEEL 313
+L L L + NNL GPIP P ++ + +++ +SG IP+ L
Sbjct: 74 NLPYLNFLYIGGINNLVGPIP------------PAIAKLTQLHYLYITHTNVSGAIPDFL 121
Query: 314 GSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKL-QGLYL 372
+V L + N LSG +P S+S L NL + N+++G IP +G KL + +
Sbjct: 122 SQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI 181
Query: 373 GNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSS 432
N+LTG IP + +L L ++L+ N L G FG+ K + L+ N L L
Sbjct: 182 SRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK- 239
Query: 433 LSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNL 492
+ NL GL L++N++ G + P+ L L +L +L
Sbjct: 240 VGLSKNLNGLDLRNNRIYGTL--------------------------PQGLTQLKFLHSL 273
Query: 493 DLHENKFTGEIPPDLGNLMQLEYLDVSRNR-LCGQIPETMCS 533
++ N GEIP GNL + + + N+ LCG P C+
Sbjct: 274 NVSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCG-SPLPACT 313
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 250 bits (641), Expect = 6e-76
Identities = 83/314 (26%), Positives = 121/314 (38%), Gaps = 42/314 (13%)
Query: 142 LDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGS--LPYEVGNAAALERLVLTN-NMLK 198
D + + G++ + + + + L +P + N L L + N L
Sbjct: 31 TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLV 90
Query: 199 GHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQ 258
G +P I L+ L L + G IP L +L TLD N LSG +P I+ L
Sbjct: 91 GPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150
Query: 259 LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVV 318
L + N +SG I P SY + L +S NRL+G IP +
Sbjct: 151 LVGITFDGNRISGAI---PDSYG---SFSKLFTS-----MTISRNRLTGKIPPTFANL-- 197
Query: 319 VVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLT 378
NL +DLSRN L G FG Q ++L N L
Sbjct: 198 -----------------------NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA 234
Query: 379 GSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILN 438
+ +G L L+L N++ G +P LK L L++SFN L G++P N+
Sbjct: 235 FDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQR 292
Query: 439 LVGLYLQHNK-LSG 451
+NK L G
Sbjct: 293 FDVSAYANNKCLCG 306
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 231 bits (591), Expect = 7e-69
Identities = 81/381 (21%), Positives = 123/381 (32%), Gaps = 93/381 (24%)
Query: 27 KNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPREL 86
K L P+ L +W + + ++G + + ++ LS L P
Sbjct: 15 KKDLGN--PTTLSSWL--PTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYP--- 67
Query: 87 CTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDL- 144
IP L+ LP L L +
Sbjct: 68 -------------------------------------------IPSSLANLPYLNFLYIG 84
Query: 145 DSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKE 204
NN G IP +I L L +T+ + G +P
Sbjct: 85 GINNLVGPIPPAI------------------------AKLTQLHYLYITHTNVSGAIPDF 120
Query: 205 IGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQL-QCLV 263
+ + L LD + N G +P + +L + N +SG IP+ ++L +
Sbjct: 121 LSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMT 180
Query: 264 LSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLL 323
+S N L+G IP F N+ + DLS N L G GS +
Sbjct: 181 ISRNRLTGKIPPT----FANLNLAFV---------DLSRNMLEGDASVLFGSDKNTQKIH 227
Query: 324 LNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPW 383
L N L+ + + NL LDL N++ G +P L L + N L G IP
Sbjct: 228 LAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP- 285
Query: 384 SLGSLGGLVKLNLTGNK-LSG 403
G+L NK L G
Sbjct: 286 QGGNLQRFDVSAYANNKCLCG 306
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 207 bits (530), Expect = 2e-60
Identities = 72/281 (25%), Positives = 115/281 (40%), Gaps = 33/281 (11%)
Query: 2 LSFNALSGS--LPEELSDLPILT--FAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGK 57
LS L +P L++LP L + N L G +P + Q+ L ++ G
Sbjct: 57 LSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGA 116
Query: 58 IPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLS 117
IP + L ++ S N LSG++P + + +L I DGN ++G I + S L
Sbjct: 117 IPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLF 176
Query: 118 Q-LVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGS 176
+ I RN + G IP + L L +DL N G V
Sbjct: 177 TSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLF------------------- 217
Query: 177 LPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLT 236
G+ +++ L N L L ++G L+ LDL +N G +P L L
Sbjct: 218 -----GSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLH 271
Query: 237 TLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNL--SGPIPS 275
+L++ NNL G IP+ +L + ++N P+P+
Sbjct: 272 SLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGSPLPA 311
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 196 bits (500), Expect = 3e-56
Identities = 73/252 (28%), Positives = 114/252 (45%), Gaps = 12/252 (4%)
Query: 332 KIPGSLSRLTNL----TTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGS--IPWSL 385
+I L T L T D G + + ++ L L L IP SL
Sbjct: 13 QIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSL 72
Query: 386 GSLGGLVKLNLTG-NKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYL 444
+L L L + G N L G +P + L +L +L ++ + G +P LS I LV L
Sbjct: 73 ANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDF 132
Query: 445 QHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYL-TNLDLHENKFTGEI 503
+N LSG + S+ + + N G +P S G+ S L T++ + N+ TG+I
Sbjct: 133 SYNALSGTLPPSISSLP--NLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKI 190
Query: 504 PPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKI 563
PP NL L ++D+SRN L G S N + LA+N L + + G+ +NL+ +
Sbjct: 191 PPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGL 249
Query: 564 SLTGNKDLCGKI 575
L N+ + G +
Sbjct: 250 DLRNNR-IYGTL 260
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 2e-10
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 2 LSFNALSGSLPEELSDLPILTF-AAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
L+ N+L+ L + + L N++ G+LP L + SL +S N G+IP
Sbjct: 228 LAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP- 285
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCT 88
+ GN + +NN P CT
Sbjct: 286 QGGNLQRFDVSAYANNKCLCGSPLPACT 313
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 287 bits (736), Expect = 1e-83
Identities = 95/607 (15%), Positives = 197/607 (32%), Gaps = 55/607 (9%)
Query: 7 LSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCS 66
F E + L N ++ L L+ G++P IG +
Sbjct: 288 YYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLT 347
Query: 67 MLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHI 126
LK +S + + S + + + + + +
Sbjct: 348 ELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHY-----------------KKM 390
Query: 127 YGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAA 186
+ + L+ L+ ++ N I S + N + + +
Sbjct: 391 FLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRIT-FISKAIQRLTK 449
Query: 187 LERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLS 246
L+ + N+ + + + + LT ++L N
Sbjct: 450 LQIIYFANSPFTY-DNIAVDWED----ANSDYAKQYENEELSWSNLKDLTDVELYNCPNM 504
Query: 247 GLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLS 306
+P+ + DL +LQ L ++ N K + IQ F + YN L
Sbjct: 505 TQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQI---FYMGYNNLE 561
Query: 307 G-PIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSI 365
P L V + L +N + + + LT L L NQ+ +
Sbjct: 562 EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEEIPEDFCAFTD 619
Query: 366 KLQGLYLGNNQLTGSIP--WSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKE-----LTHL 418
+++GL +N+L IP ++ S+ + ++ + NK+ + ++ + + +
Sbjct: 620 QVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTV 678
Query: 419 DLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAW-----KIATMNMSNN 473
LS+NE+ + + + L +N ++ + + T+++ N
Sbjct: 679 TLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFN 738
Query: 474 LFDGGLPRSL--GNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSR------NRLCG 525
L L YL+N+D+ N F+ P N QL+ + NR+
Sbjct: 739 KL-TSLSDDFRATTLPYLSNMDVSYNCFS-SFPTQPLNSSQLKAFGIRHQRDAEGNRILR 796
Query: 526 QIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTF 585
Q P + + +L+ L + N + V + L + + N ++ + S C
Sbjct: 797 QWPTGITTCPSLIQLQIGSNDIRK-VD-EKLTPQLYILDIADNPNISID-VTSVCPYIEA 853
Query: 586 GKLALLH 592
G LL+
Sbjct: 854 GMYVLLY 860
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 274 bits (702), Expect = 7e-79
Identities = 88/590 (14%), Positives = 175/590 (29%), Gaps = 98/590 (16%)
Query: 28 NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRE-L 86
G +P +G +++ L ++ + + + L
Sbjct: 333 FGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFL 392
Query: 87 CTSESLEEIDLDGNLLT-----GTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LM 140
+ L DL + + I+ +Q+ N I I + + +L L
Sbjct: 393 DYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRI-TFISKAIQRLTKLQ 451
Query: 141 VLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGH 200
++ ++ FT W + N L + L N
Sbjct: 452 IIYFANSPFTYDNIAVDWEDANS-----DYAKQYENEELSWSNLKDLTDVELYNCPNMTQ 506
Query: 201 LPKEIGNLSALSVLDLNSNLFDGI---------IPYELGDCISLTTLDLGNNNLSGLIPE 251
LP + +L L L++ N + + + +G NNL
Sbjct: 507 LPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPAS 566
Query: 252 K-IADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIP 310
+ + +L L HN + + + F L+ L YN++ IP
Sbjct: 567 ASLQKMVKLGLLDCVHNKVRH-LEA-----F--GTNVKLT------DLKLDYNQIEE-IP 611
Query: 311 EELGSCV-VVVDLLLNNNMLSGKIP--GSLSRLTNLTTLDLSRNQLTGPIPSEFGD---- 363
E+ + V L ++N L IP + + + ++D S N++ +
Sbjct: 612 EDFCAFTDQVEGLGFSHNKLKY-IPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDY 670
Query: 364 -SIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLS-------GKVPTSFGNLKEL 415
I + L N++ + + + L+ N ++ ++ N L
Sbjct: 671 KGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLL 730
Query: 416 THLDLSFNELDGQLPSSL--SNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNN 473
T +DL FN+L L + + L + + +N S
Sbjct: 731 TTIDLRFNKLTS-LSDDFRATTLPYLSNMDVSYNCFSS---------------------- 767
Query: 474 LFDGGLPRSLGNLSYLT------NLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQI 527
P N S L D N+ + P + L L + N + +
Sbjct: 768 -----FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIRK-V 821
Query: 528 PETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLT----GNKDLCG 573
E + L L +A+N + + +C + +D+ G
Sbjct: 822 DEKL--TPQLYILDIADNPNISI-DVTSVCPYIEAGMYVLLYDKTQDIRG 868
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 226 bits (578), Expect = 4e-62
Identities = 69/489 (14%), Positives = 151/489 (30%), Gaps = 54/489 (11%)
Query: 124 NHIYGSIPEYLSKLPL-MVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVG 182
I +Y + + LD + + + +S F+ ++ ++
Sbjct: 262 KETAEYIKDYKALKAIWEALDGKNWRYYSGTINNTIHSLN-WNFNKELDMWGDQPGVDLD 320
Query: 183 NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGN 242
N + L L KG +P IG L+ L VL ++ + ++ +
Sbjct: 321 NNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERK 380
Query: 243 NNLSGLIPEKIADLAQ-LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHG----- 296
+ + + D Q L L + ++ KP + ++ D
Sbjct: 381 HRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFI 440
Query: 297 -----------VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTT 345
+ + + + D + S S L +LT
Sbjct: 441 SKAIQRLTKLQIIYFANSPFTYDNIAVDWE-----DANSDYAKQYENEELSWSNLKDLTD 495
Query: 346 LDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTG---------SIPWSLGSLGGLVKLNL 396
++L +P D +LQ L + N+ + + + +
Sbjct: 496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYM 555
Query: 397 TGNKLSG-KVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDE 455
N L S + +L LD N++ + + + L L L +N++ ++
Sbjct: 556 GYNNLEEFPASASLQKMVKLGLLDCVHNKV--RHLEAFGTNVKLTDLKLDYNQIEEIPED 613
Query: 456 LFSNSAAWKIATMNMSNNLFDGGLPR--SLGNLSYLTNLDLHENKFTGEIP-----PDLG 508
+ + ++ + S+N +P + ++ + ++D NK E D
Sbjct: 614 FCAFTD--QVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDY 670
Query: 509 NLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS--------GICQNL 560
+ + +S N + E + S + + L+ N + + S L
Sbjct: 671 KGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLL 730
Query: 561 SKISLTGNK 569
+ I L NK
Sbjct: 731 TTIDLRFNK 739
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 212 bits (541), Expect = 2e-57
Identities = 58/445 (13%), Positives = 133/445 (29%), Gaps = 57/445 (12%)
Query: 2 LSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPE 61
+ + + + + + + N + + L + + ++P
Sbjct: 455 FANSPFTYDNIAVDWEDANSDY----AKQYENEELSWSNLKDLTDVELYNCPNMTQLPDF 510
Query: 62 IGNCSMLKSISLSNNFLSG---------SIPRELCTSESLEEIDLDGNLLTG-TIEGVFE 111
+ + L+S++++ N + + T ++ + N L +
Sbjct: 511 LYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQ 570
Query: 112 KCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIW-NSETLMEFSAA 169
K L L N + + L L LD N I P ++ + +
Sbjct: 571 KMVKLGLLDCVHNKV-RHLEA-FGTNVKLTDLKLDYNQIEEI-PEDFCAFTDQVEGLGFS 627
Query: 170 NNLLEGSLP--YEVGNAAALERLVLTNNMLKGHLPKEIG------NLSALSVLDLNSNLF 221
+N L+ +P + + + + + N + + I S + L+ N
Sbjct: 628 HNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGS-EGRNISCSMDDYKGINASTVTLSYNEI 685
Query: 222 DGIIPYELGDCISLTTLDLGNNNLSGL-------IPEKIADLAQLQCLVLSHNNLSGPIP 274
++T+ L NN ++ + + L + L N L+ +
Sbjct: 686 QKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTS-LS 744
Query: 275 SKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDL------LLNNNM 328
FR +P LS + D+SYN S P + + + N
Sbjct: 745 DD----FRATTLPYLSNM------DVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNR 793
Query: 329 LSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSL 388
+ + P ++ +L L + N + + + L L + +N S+
Sbjct: 794 ILRQWPTGITTCPSLIQLQIGSNDIRK-VDEKLTPQ--LYILDIADNPNISIDVTSVCPY 850
Query: 389 GGLVKLNLTGNKLSGKVPTSFGNLK 413
L +K ++
Sbjct: 851 IEAGMYVLLYDKTQDIRGCDALGIE 875
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 8e-05
Identities = 15/104 (14%), Positives = 37/104 (35%), Gaps = 1/104 (0%)
Query: 468 MNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQI 527
++ N + G + + N + + + + DL N ++ L ++ G++
Sbjct: 281 LDGKNWRYYSGTINNTIHSL-NWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRV 339
Query: 528 PETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDL 571
P+ + L+ L LS + G + +S +
Sbjct: 340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRI 383
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 279 bits (715), Expect = 5e-83
Identities = 111/557 (19%), Positives = 187/557 (33%), Gaps = 38/557 (6%)
Query: 28 NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELC 87
N++ G+LP+ E L S N L + L+ +
Sbjct: 25 NEIPGTLPNST------ECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQ 78
Query: 88 TSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDS 146
+ L+ + L N L E L L + I L L L L S
Sbjct: 79 SQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGS 138
Query: 147 NNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVL--TNNMLKGHLPKE 204
N+ + I + +E L NN + ++ + L L N + +
Sbjct: 139 NHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA-GIEPG 197
Query: 205 IGNLSALSVLDLNSNLFDGIIPYELGDC--ISLTTLDLGNNNLSGLIPEKIADLA--QLQ 260
+ + L+ +I L + SL + + + P L ++
Sbjct: 198 AFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVE 257
Query: 261 CLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVV 320
+ L + + F L DL+ LS +P L +
Sbjct: 258 SINLQKHYFFNISS----NTFH--CFSGLQ------ELDLTATHLSE-LPSGLVGLSTLK 304
Query: 321 DLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSE-FGDSIKLQGLYLGNNQLTG 379
L+L+ N S S +LT L + N + + + L+ L L ++ +
Sbjct: 305 KLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIET 364
Query: 380 S--IPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLP-SSLSNI 436
S L +L L LNL+ N+ +F +L LDL+F L + S N+
Sbjct: 365 SDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNL 424
Query: 437 LNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLF---DGGLPRSLGNLSYLTNLD 493
L L L H+ L ++LF + +N+ N F + SL L L L
Sbjct: 425 HLLKVLNLSHSLLDISSEQLFDGLP--ALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILV 482
Query: 494 LHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPR 553
L + +L + ++D+S NRL E + L +YL+LA N + ++P
Sbjct: 483 LSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKG-IYLNLASNHISIILPS 541
Query: 554 S-GICQNLSKISLTGNK 569
I I+L N
Sbjct: 542 LLPILSQQRTINLRQNP 558
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 223 bits (570), Expect = 8e-63
Identities = 99/510 (19%), Positives = 172/510 (33%), Gaps = 73/510 (14%)
Query: 69 KSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYG 128
K+ + N L+ IP L S E ++ N+L F S L L
Sbjct: 15 KTYNCENLGLN-EIPGTL--PNSTECLEFSFNVLPTIQNTTF---SRLINLT-------- 60
Query: 129 SIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALE 188
LDL I + + L+
Sbjct: 61 ------------FLDLTRCQIYWIHEDTF------------------------QSQHRLD 84
Query: 189 RLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGL 248
LVLT N L + AL L I L + +L +L LG+N++S +
Sbjct: 85 TLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSI 144
Query: 249 IPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGP 308
K +L+ L +N + S ++ + + +L+ N ++G
Sbjct: 145 KLPKGFPTEKLKVLDFQNNAIHYLSKEDMS------SLQQATNL----SLNLNGNDIAG- 193
Query: 309 IPEELGSCVVVVDLLLNNNMLSGKIPGSLS--RLTNLTTLDLSRNQLTGPIPSEFGD--S 364
I V L I L + +L P+ F
Sbjct: 194 IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCE 253
Query: 365 IKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNE 424
+ ++ + L + + GL +L+LT LS ++P+ L L L LS N+
Sbjct: 254 MSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANK 312
Query: 425 LDGQLPSSLSNILNLVGLYLQHNKLSGPV-DELFSNSAAWKIATMNMSNNLFD--GGLPR 481
+ S SN +L L ++ N + N + +++S++ +
Sbjct: 313 FENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE--NLRELDLSHDDIETSDCCNL 370
Query: 482 SLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPET-MCSLSNLLYL 540
L NLS+L +L+L N+ QLE LD++ RL + ++ +L L L
Sbjct: 371 QLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVL 430
Query: 541 SLAENRLEGMVPRS-GICQNLSKISLTGNK 569
+L+ + L+ + L ++L GN
Sbjct: 431 NLSHSLLDISSEQLFDGLPALQHLNLQGNH 460
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 4e-41
Identities = 85/411 (20%), Positives = 145/411 (35%), Gaps = 49/411 (11%)
Query: 2 LSFNALSGSLPEELS-----DLPILTFAAEK-NQLSGSLPSWLGNWNQMESLLLSSNQFI 55
+ + L L + TF +S ++ L +ES+ L + F
Sbjct: 209 FGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCE-MSVESINLQKHYFF 267
Query: 56 GKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSN 115
S L+ + L+ LS +P L +L+++ L N + +
Sbjct: 268 NISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPS 326
Query: 116 LSQLVIFRNHIYGSIPEY-LSKLP-LMVLDLDSNNFTGI--IPVSIWNSETLMEFSAANN 171
L+ L I N + L L L LDL ++ + + N L + + N
Sbjct: 327 LTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYN 386
Query: 172 LLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEI-GNLSALSVLDLNSNLFDGIIPYELG 230
LE L L LK + NL L VL+L+ +L D
Sbjct: 387 EPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFD 446
Query: 231 DCISLTTLDLGNNNLSGLI---PEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMP 287
+L L+L N+ + L +L+ LVLS +LS S F ++
Sbjct: 447 GLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLS----SIDQHAFT--SLK 500
Query: 288 DLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLD 347
++ + DLS+NRL+ E L + L L +N +S +P L L+ T++
Sbjct: 501 MMNHV------DLSHNRLTSSSIEALSHLKGIY-LNLASNHISIILPSLLPILSQQRTIN 553
Query: 348 LSRNQLTG---------------PIPSEFGDSI-----KLQGLYLGNNQLT 378
L +N L + D++ L+G+ L + L+
Sbjct: 554 LRQNPLDCTCSNIYFLEWYKENMQKLEDTEDTLCENPPLLRGVRLSDVTLS 604
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 269 bits (690), Expect = 7e-83
Identities = 72/306 (23%), Positives = 121/306 (39%), Gaps = 31/306 (10%)
Query: 674 ILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK 733
+ + + G FG V+KA + VAVK Q + E+ +L +K
Sbjct: 19 LYFQSMPLQLLEVKARGRFGCVWKA-QLLNEYVAVKIFPIQDKQSW-QNEYEVYSLPGMK 76
Query: 734 HQNLVPLLGYC----SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA 789
H+N++ +G S D + L+ + GSL +L+ + W++ IA A
Sbjct: 77 HENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV-----VSWNELCHIAETMA 131
Query: 790 RGLAFLHH-------GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD 842
RGLA+LH G P I HRDIK+ N+LL A +ADFGLA A ++ T
Sbjct: 132 RGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTH 191
Query: 843 -IAGTFGYIPPEYGQSG-----RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLV 896
GT Y+ PE + + R D+Y+ G++L EL + +
Sbjct: 192 GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYM-LPFE 250
Query: 897 GWV-----FQKMKKGQAADVLDPTVLTA-DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVL 950
+ + M++ P + M + +C + R + V
Sbjct: 251 EEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVG 310
Query: 951 KFLKEI 956
+ + ++
Sbjct: 311 ERITQM 316
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 248 bits (636), Expect = 6e-72
Identities = 105/561 (18%), Positives = 184/561 (32%), Gaps = 65/561 (11%)
Query: 28 NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELC 87
N L N+++++ L LS + L ++ L+ N + P
Sbjct: 42 NPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFS 101
Query: 88 TSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYG-SIPEYLSKLP-LMVLDLD 145
SLE + L + L +L + N I+ +P Y S L L+ +DL
Sbjct: 102 GLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLS 161
Query: 146 SNNFTGIIPVSIWN----SETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHL 201
N I + + + + N ++ + + L L L N ++
Sbjct: 162 YNYIQTITVNDLQFLRENPQVNLSLDMSLNPID-FIQDQAFQGIKLHELTLRGNFNSSNI 220
Query: 202 PKE-IGNLSALSVLDLNSNLFDGIIPYELGDC--------ISLTTLDLGNNNLSGLIPEK 252
K + NL+ L V L F E+ + +++ L N K
Sbjct: 221 MKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK 280
Query: 253 IADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEE 312
LA + + L+ ++ + D+ + +L +
Sbjct: 281 FHCLANVSAMSLAGVSIK--------------YLEDVPKHFKWQSLSIIRCQLKQFPTLD 326
Query: 313 LGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGD--SIKLQGL 370
L + L L N S I L +L+ LDLSRN L+ + D + L+ L
Sbjct: 327 LPF---LKSLTLTMNKGS--ISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHL 381
Query: 371 YLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTS-FGNLKELTHLDLSFNELDGQL 429
L N + + L L L+ + L S F +L++L +LD+S+
Sbjct: 382 DLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDF 440
Query: 430 PSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYL 489
+ +L L + N L N + L
Sbjct: 441 DGIFLGLTSLNTLKMAGNSFKD-------------------------NTLSNVFANTTNL 475
Query: 490 TNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEG 549
T LDL + + L +L+ L++S N L L +L L + NR+E
Sbjct: 476 TFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET 535
Query: 550 MVPRS-GICQNLSKISLTGNK 569
++L+ +LT N
Sbjct: 536 SKGILQHFPKSLAFFNLTNNS 556
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 206 bits (526), Expect = 6e-57
Identities = 95/470 (20%), Positives = 153/470 (32%), Gaps = 43/470 (9%)
Query: 2 LSFNALSGSLPEELSDLPILTF-AAEKNQLSG-SLPSWLGNWNQMESLLLSSNQFIGKIP 59
L+ + L L N + LP++ N + + LS N I I
Sbjct: 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY-IQTIT 169
Query: 60 PEI-----GNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTI-EGVFEKC 113
N + S+ +S N + I + L E+ L GN + I + +
Sbjct: 170 VNDLQFLRENPQVNLSLDMSLNPID-FIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNL 228
Query: 114 SNLSQLVIFRNHIYG---------SIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLM 164
+ L + SI E L + + L N V +
Sbjct: 229 AGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVS 288
Query: 165 EFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGI 224
S A + +V + L + LK +L L L L N
Sbjct: 289 AMSLAGVSI--KYLEDVPKHFKWQSLSIIRCQLKQF---PTLDLPFLKSLTLTMNKGS-- 341
Query: 225 IPYELGDCISLTTLDLGNNNLSGLIPEKIADLA--QLQCLVLSHNNLSGPIPSKPSSYFR 282
I ++ SL+ LDL N LS +DL L+ L LS N S+ F
Sbjct: 342 ISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIM-----SANFM 396
Query: 283 QANMPDLSFIQHHGVFDLSYNRLSGPIPEE-LGSCVVVVDLLLNNNMLSGKIPGSLSRLT 341
+ +L + D ++ L S ++ L ++ G LT
Sbjct: 397 --GLEELQHL------DFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLT 448
Query: 342 NLTTLDLSRNQLTGPIPSE-FGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNK 400
+L TL ++ N S F ++ L L L QL +L L LN++ N
Sbjct: 449 SLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNN 508
Query: 401 LSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLS 450
L + + L L+ LD SFN ++ +L L +N ++
Sbjct: 509 LLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 196 bits (500), Expect = 2e-53
Identities = 81/459 (17%), Positives = 148/459 (32%), Gaps = 42/459 (9%)
Query: 128 GSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAAL 187
GS+ + +P + + + P I + + N L+ Y N + L
Sbjct: 2 GSLNPCIEVVPNITYQCMDQKLSKV-PDDI--PSSTKNIDLSFNPLKILKSYSFSNFSEL 58
Query: 188 ERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSG 247
+ L L+ ++ K L LS L L N P SL L L+
Sbjct: 59 QWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLAS 118
Query: 248 LIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSG 307
L I L L+ L ++HN + K +YF +N+ +L + DLSYN +
Sbjct: 119 LESFPIGQLITLKKLNVAHNFIHS---CKLPAYF--SNLTNLVHV------DLSYNYIQT 167
Query: 308 PIPEEL----GSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGD 363
+L + V + L ++ N + I + L L L N + I
Sbjct: 168 ITVNDLQFLRENPQVNLSLDMSLNPID-FIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQ 226
Query: 364 SIK-------LQGLYLGNNQLTGSIPWSLGSLGGLVK--LNLTGNKLSGKVPTSFGNLKE 414
++ + G + L P + L + LT F L
Sbjct: 227 NLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLAN 286
Query: 415 LTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNL 474
++ + L+ + + + L + +L + ++ ++ N
Sbjct: 287 VSAMSLAGVSI--KYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPF-----LKSLTLTMNK 339
Query: 475 FDGGLPRSLGNLSYLTNLDLHENKFT--GEIPPDLGNLMQLEYLDVSRNRLCGQIPETMC 532
+ L L+ LDL N + G L +LD+S N +
Sbjct: 340 GS--ISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFM 396
Query: 533 SLSNLLYLSLAENRLEGMVPRSGI--CQNLSKISLTGNK 569
L L +L + L+ + S + L + ++
Sbjct: 397 GLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTN 435
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 3e-35
Identities = 54/296 (18%), Positives = 99/296 (33%), Gaps = 19/296 (6%)
Query: 307 GPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK 366
G + + + ++ + +P + ++ +DLS N L F + +
Sbjct: 2 GSLNPCIEVVPNITYQCMDQKLSK--VPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSE 57
Query: 367 LQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELD 426
LQ L L ++ + L L L LTGN + P SF L L +L +L
Sbjct: 58 LQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLA 117
Query: 427 GQLPSSLSNILNLVGLYLQHNKLSG-PVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGN 485
+ ++ L L + HN + + FSN + +++S N L
Sbjct: 118 SLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLT--NLVHVDLSYNYIQTITVNDLQF 175
Query: 486 LSYLTN----LDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCS-LSNLLYL 540
L LD+ N I ++L L + N I +T L+ L
Sbjct: 176 LRENPQVNLSLDMSLNPID-FIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVH 234
Query: 541 SLAENRLEGM----VPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTFGKLALLH 592
L + + I + L +++ + + + F LA +
Sbjct: 235 RLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDD--IVKFHCLANVS 288
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 219 bits (559), Expect = 3e-64
Identities = 72/316 (22%), Positives = 121/316 (38%), Gaps = 46/316 (14%)
Query: 677 ATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEME--TLGKVKH 734
+N +IG G +G VYK +L D + VAVK S + F E + ++H
Sbjct: 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFS---FANRQNFINEKNIYRVPLMEH 66
Query: 735 QNLVPLLGYC-----SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA 789
N+ + E LLV EY NGSL +L T W ++A
Sbjct: 67 DNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT-----SDWVSSCRLAHSVT 121
Query: 790 RGLAFLH------HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC-------E 836
RGLA+LH + P I HRD+ + N+L+ + ++DFGL+ ++ E
Sbjct: 122 RGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEE 181
Query: 837 THVSTDIAGTFGYIPPEY-------GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKD 889
+ + GT Y+ PE + + D+Y+ G+I E+ P +
Sbjct: 182 DNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP-GES 240
Query: 890 IEG-----GNLVGW--VFQKMKKGQAADVLDPTV--LTADSKPMMLKMLRIAGDCLSDNP 940
+ VG F+ M+ + + P ++ + + DC +
Sbjct: 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDA 300
Query: 941 AMRPTMLHVLKFLKEI 956
R T + + E+
Sbjct: 301 EARLTAQXAEERMAEL 316
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 213 bits (545), Expect = 7e-63
Identities = 78/287 (27%), Positives = 133/287 (46%), Gaps = 39/287 (13%)
Query: 685 NIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGH-------REFTAEMETLGKVKHQN 736
IG GGFG V+K + D VA+K L ++G +EF E+ + + H N
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
+V L G +V E++ G L L ++ ++ W + ++ A G+ ++
Sbjct: 85 IVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHPIK---WSVKLRLMLDIALGIEYMQ 139
Query: 797 HGFTPHIIHRDIKASNILLNEEFE-----AKVADFGLARLISACETHVSTDIAGTFGYIP 851
+ P I+HRD+++ NI L E AKVADFGL++ H + + G F ++
Sbjct: 140 N-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ----SVHSVSGLLGNFQWMA 194
Query: 852 PE--YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909
PE + T + D YSF +IL ++TG+ P F + G + ++ ++G
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGP----FDEYSYGK-IKFINMIREEG--- 246
Query: 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
L PT + D P + ++ C S +P RP +++K L E+
Sbjct: 247 --LRPT-IPEDCPPRLRNVIE---LCWSGDPKKRPHFSYIVKELSEL 287
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 212 bits (541), Expect = 4e-62
Identities = 74/276 (26%), Positives = 120/276 (43%), Gaps = 26/276 (9%)
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
++G G FG V KA K VA+K++ + + F E+ L +V H N+V L G C
Sbjct: 14 EVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHII 804
LV EY GSL L L ++G+A+LH +I
Sbjct: 71 L--NPVCLVMEYAEGGSLYNVLHGA-EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 805 HRDIKASNILLNEEFE-AKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTR 863
HRD+K N+LL K+ DFG A I T+ G+ ++ PE + + +
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTACDIQ----THMTNNKGSAAWMAPEVFEGSNYSEK 183
Query: 864 GDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKP 923
DV+S+G+IL E++T ++P F +I G + + G P L +
Sbjct: 184 CDVFSWGIILWEVITRRKP----FDEIGGPAFR--IMWAVHNG-----TRPP-LIKNLPK 231
Query: 924 MMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
+ ++ C S +P+ RP+M ++K + +
Sbjct: 232 PIESLMT---RCWSKDPSQRPSMEEIVKIMTHLMRY 264
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 212 bits (541), Expect = 5e-62
Identities = 82/274 (29%), Positives = 138/274 (50%), Gaps = 22/274 (8%)
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGH--REFTAEMETLGKVKHQNLVPLLG 742
IG G FGTV++A G VAVK L + EF E+ + +++H N+V +G
Sbjct: 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH 802
+ +V EY+ GSL L G+ E L +R +A A+G+ +LH+ P
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHN-RNPP 159
Query: 803 IIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTT 862
I+HR++K+ N+L+++++ KV DFGL+RL ++ S AGT ++ PE + S
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS-SKSAAGTPEWMAPEVLRDEPSNE 218
Query: 863 RGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSK 922
+ DVYSFGVIL EL T ++P + ++ +V V K K+ + +
Sbjct: 219 KSDVYSFGVILWELATLQQP----WGNLNPAQVVAAVGFKCKR--------LE-IPRNLN 265
Query: 923 PMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
P + ++ C ++ P RP+ ++ L+ +
Sbjct: 266 PQVAAIIE---GCWTNEPWKRPSFATIMDLLRPL 296
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 204 bits (522), Expect = 7e-60
Identities = 81/284 (28%), Positives = 122/284 (42%), Gaps = 37/284 (13%)
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKL----SQAKTQGHREFTAEMETLGKVKHQNLVPL 740
IIG GGFG VY+A G VAVK + +Q E + +KH N++ L
Sbjct: 13 EIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT 800
G C + LV E+ G L+ L + + D A ARG+ +LH
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKR-----IPPDILVNWAVQIARGMNYLHDEAI 126
Query: 801 PHIIHRDIKASNILLNEEFE--------AKVADFGLARLISACETHVSTDIAGTFGYIPP 852
IIHRD+K+SNIL+ ++ E K+ DFGLAR AG + ++ P
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK---MSAAGAYAWMAP 183
Query: 853 EYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912
E ++ + DV+S+GV+L EL+TG+ P F+ I+G + V
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLTGEVP----FRGIDGLAVAYGVAMNKLALPIPSTC 239
Query: 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
++ DC + +P RP+ ++L L I
Sbjct: 240 PE------------PFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 202 bits (516), Expect = 9e-59
Identities = 75/299 (25%), Positives = 124/299 (41%), Gaps = 39/299 (13%)
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEME--TLGKVKHQNLVPLLG 742
+G G +G V++ + G+ VAVK S ++ + + E E ++H+N++ +
Sbjct: 14 ECVGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 743 YCSFDEEK----LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH-- 796
L+ Y GSL +L+ T L +I A GLA LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTVSCLRIVLSIASGLAHLHIE 124
Query: 797 ---HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV---STDIAGTFGYI 850
P I HRD+K+ NIL+ + + +AD GLA + S + + GT Y+
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 851 PPE------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE------FKDIEGGNLVGW 898
PE S R D+++FG++L E+ G F D+ +
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP--- 241
Query: 899 VFQKMKKGQAADVLDPTV-LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
F+ M+K D P + S P + + ++ +C NP+ R T L + K L +I
Sbjct: 242 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 202 bits (516), Expect = 2e-58
Identities = 77/300 (25%), Positives = 122/300 (40%), Gaps = 39/300 (13%)
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEME--TLGKVKHQNLVPLLG 742
IG G +G V+ G+ VAVK T + E E ++H+N++ +
Sbjct: 43 KQIGKGRYGEVWMGKW-RGEKVAVKVF---FTTEEASWFRETEIYQTVLMRHENILGFIA 98
Query: 743 YC----SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH-- 796
+ L+ +Y NGSL +L++ T L K+A + GL LH
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-----LDAKSMLKLAYSSVSGLCHLHTE 153
Query: 797 ---HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV---STDIAGTFGYI 850
P I HRD+K+ NIL+ + +AD GLA + V GT Y+
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYM 213
Query: 851 PPE------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE------FKDIEGGNLVGW 898
PPE +S D+YSFG+IL E+ G + D+ +
Sbjct: 214 PPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP--- 270
Query: 899 VFQKMKKGQAADVLDPTV-LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957
++ M++ L P+ S + +M ++ +C + NPA R T L V K L ++
Sbjct: 271 SYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS 330
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 5e-58
Identities = 64/282 (22%), Positives = 118/282 (41%), Gaps = 33/282 (11%)
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLG 742
+ + G ++K G + VK L T+ R+F E L H N++P+LG
Sbjct: 16 TKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74
Query: 743 YCSFDEEKLL--VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT 800
C + +M GSL L T V+ + K A ARG+AFLH
Sbjct: 75 ACQSPPAPHPTLITHWMPYGSLYNVLHEGTN--FVVDQSQAVKFALDMARGMAFLHT-LE 131
Query: 801 PHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE---YGQS 857
P I + + +++++E+ A+++ + + S ++ PE
Sbjct: 132 PLIPRHALNSRSVMIDEDMTARISMADVKF------SFQSPGRMYAPAWVAPEALQKKPE 185
Query: 858 GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917
+ D++SF V+L ELVT + P F D+ + V + L PT +
Sbjct: 186 DTNRRSADMWSFAVLLWELVTREVP----FADLSNMEIGMKVALEG--------LRPT-I 232
Query: 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
P + K+++ C++++PA RP ++ L++++ +
Sbjct: 233 PPGISPHVSKLMK---ICMNEDPAKRPKFDMIVPILEKMQDK 271
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 199 bits (507), Expect = 6e-57
Identities = 76/300 (25%), Positives = 125/300 (41%), Gaps = 35/300 (11%)
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEME--TLGKVKHQNLVPLLG 742
IG G FG V++ G+ VAVK ++ R + E E ++H+N++ +
Sbjct: 48 ESIGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIA 103
Query: 743 YCSFDEEK----LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH-- 796
+ D LV +Y +GSL +L T + + K+A A GLA LH
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHME 158
Query: 797 ---HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV---STDIAGTFGYI 850
P I HRD+K+ NIL+ + +AD GLA + + GT Y+
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 218
Query: 851 PPE------YGQSGRSTTRGDVYSFGVILLELVTGKEPTG--PEFKDIEGGNLVGW--VF 900
PE + S R D+Y+ G++ E+ G +++ + +LV
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ-LPYYDLVPSDPSV 277
Query: 901 QKMKKGQAADVLDPTV-LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
++M+K L P + S + M +I +C N A R T L + K L ++ +
Sbjct: 278 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 197 bits (502), Expect = 6e-57
Identities = 80/280 (28%), Positives = 128/280 (45%), Gaps = 29/280 (10%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGH--REFTAEMETLGKVKHQNLVPLLGYC 744
IG G FGTVYK VAVK L+ + F E+ L K +H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 745 SFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHI 803
+ +L +V ++ SL L E K IA ARG+ +LH I
Sbjct: 90 T--APQLAIVTQWCEGSSLYHHLHASETKFE---MKKLIDIARQTARGMDYLH---AKSI 141
Query: 804 IHRDIKASNILLNEEFEAKVADFGLARLISACE-THVSTDIAGTFGYIPPE---YGQSGR 859
IHRD+K++NI L+E+ K+ DFGLA S +H ++G+ ++ PE S
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 860 STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTA 919
+ + DVY+FG++L EL+TG+ P + +I + + + + +
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLP----YSNINNRDQIIEMVGRGSLSPDLSKVRSNC--- 254
Query: 920 DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
P +K R+ +CL RP+ +L ++E+ E
Sbjct: 255 ---PKRMK--RLMAECLKKKRDERPSFPRILAEIEELARE 289
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 203 bits (517), Expect = 3e-56
Identities = 97/522 (18%), Positives = 169/522 (32%), Gaps = 53/522 (10%)
Query: 64 NCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFR 123
+C + + SIP L + ++ +DL N +T G C+NL L++
Sbjct: 3 SCDASGVCDGRSRSFT-SIPSGLTAA--MKSLDLSFNKITYIGHGDLRACANLQVLILKS 59
Query: 124 NHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLL-EGSLPYEV 181
+ I + L L LDL N+ + + +L + N +
Sbjct: 60 SRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLF 119
Query: 182 GNAAALERLVLTNNMLKGHLPKE-IGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDL 240
N L+ L + N + + L++L+ L++ + L + L L
Sbjct: 120 PNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTL 179
Query: 241 GNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSS----------YFRQANMPDLS 290
+ + L+ L+ ++ L L NL+ S FR + + D S
Sbjct: 180 HLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDES 239
Query: 291 FIQHHGVF------------DLSYNRLSGPIPEELGS--------CVVVVDLLLNNNMLS 330
F + + D + N L P E V + L + L
Sbjct: 240 FNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLF 299
Query: 331 GKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGG 390
+ S L + + + +++ S L+ L L N + + G
Sbjct: 300 YDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGA 359
Query: 391 LVKL---NLTGNKLS--GKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQ 445
L L+ N L K LK LT LD+S N +P S + L L
Sbjct: 360 WPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTF-HPMPDSCQWPEKMRFLNLS 418
Query: 446 HNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPP 505
+ + + +++SNN D L L L + NK +P
Sbjct: 419 STGIRVVKTCIPQT-----LEVLDVSNNNLDS-FSLFLPRL---QELYISRNKLK-TLPD 468
Query: 506 DLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRL 547
L + +SRN+L L++L + L N
Sbjct: 469 A-SLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 4e-44
Identities = 89/523 (17%), Positives = 180/523 (34%), Gaps = 50/523 (9%)
Query: 2 LSFNALSGSLPEEL-SDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
+ + S+P L + + L N+++ L ++ L+L S++ I I
Sbjct: 12 GRSRSFT-SIPSGLTAAMKSLDL--SFNKITYIGHGDLRACANLQVLILKSSR-INTIEG 67
Query: 61 EI-GNCSMLKSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNLLTG-TIEGVFEKCSNLS 117
+ + L+ + LS+N LS S+ SL+ ++L GN + +F +NL
Sbjct: 68 DAFYSLGSLEHLDLSDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQ 126
Query: 118 QLVIFRNHIYGSIPE-YLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEG 175
L I + I + L L L++ + + S+ + + + +
Sbjct: 127 TLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF 186
Query: 176 SLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGI-------IPYE 228
L +++ L L + L + S + + + +
Sbjct: 187 LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKL 246
Query: 229 LGDCISLTTLDLGNNNLSGL------IPEKIADLAQLQCLVLSHNNLSG-PIPSKPSSYF 281
L + L+ ++ + L+GL + +++L +++ + + ++ + S+ +
Sbjct: 247 LRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVY 306
Query: 282 RQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKI---PGSLS 338
+ + I + +++ + L L+ N++ +
Sbjct: 307 S--LLEKVKRI------TVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKG 358
Query: 339 RLTNLTTLDLSRNQLT--GPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNL 396
+L TL LS+N L L L + N +P S + LNL
Sbjct: 359 AWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNL 417
Query: 397 TGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDEL 456
+ + V T + L LD+S N LD L L LY+ NKL D
Sbjct: 418 SSTGIR-VVKT--CIPQTLEVLDVSNNNLD-SFSLFLPR---LQELYISRNKLKTLPDAS 470
Query: 457 FSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKF 499
+ M +S N L+ L + LH N +
Sbjct: 471 LFPV----LLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 2e-38
Identities = 75/407 (18%), Positives = 138/407 (33%), Gaps = 37/407 (9%)
Query: 187 LERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLS 246
++ L L+ N + ++ + L VL L S+ + I SL LDL +N+LS
Sbjct: 28 MKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLS 87
Query: 247 GLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLS-YNRL 305
L L+ L+ L L N + +S F N+ +L + +
Sbjct: 88 SLSSSWFGPLSSLKYLNLMGNPYQT-LG--VTSLFP--NLTNLQTL------RIGNVETF 136
Query: 306 SGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSI 365
S + + +L + L SL + ++ L L ++ +
Sbjct: 137 SEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILS 196
Query: 366 KLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFG----------NLKEL 415
++ L L + L L + + S SF L E+
Sbjct: 197 SVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEV 256
Query: 416 THLDLSFNELDGQLPSSLSNI--------LNLVGLYLQHNKLSGPVDELFSNSAAWKIAT 467
D + N L PS + + + L++ L + ++S K+
Sbjct: 257 EFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLE--KVKR 314
Query: 468 MNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPD---LGNLMQLEYLDVSRNRL- 523
+ + N+ +L L LDL EN E + G L+ L +S+N L
Sbjct: 315 ITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLR 374
Query: 524 -CGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNK 569
+ E + +L NL L ++ N M + + ++L+
Sbjct: 375 SMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTG 421
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 149 bits (379), Expect = 3e-38
Identities = 74/386 (19%), Positives = 132/386 (34%), Gaps = 37/386 (9%)
Query: 200 HLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQL 259
+P + +A+ LDL+ N I +L C +L L L ++ ++ + + L L
Sbjct: 19 SIPSGL--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSL 76
Query: 260 QCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSG-PIPEELGSCVV 318
+ L LS N+LS S SS+F + L ++ +L N + +
Sbjct: 77 EHLDLSDNHLS----SLSSSWFG--PLSSLKYL------NLMGNPYQTLGVTSLFPNLTN 124
Query: 319 VVDL-LLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQL 377
+ L + N S + LT+L L++ L + L L ++
Sbjct: 125 LQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSES 184
Query: 378 TGSIPWSLGSLGGLVKLNLTGNKLSG------KVPTSFGNLKELTHLDLSFNELD-GQLP 430
+ L + L L L+ V +K+L + +L
Sbjct: 185 AFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELL 244
Query: 431 SSLSNILNLVGLYLQHNKLSGPVDELFSNSAAW---------KIATMNMSNNLFDGGLPR 481
L IL L + L+G D S S I +++ L
Sbjct: 245 KLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLST 304
Query: 482 SLGNLSYLTNLDLHENKFTGEIPPDLG-NLMQLEYLDVSRNRLCGQIPETMCS---LSNL 537
L + + + +K +P +L LE+LD+S N + + + +L
Sbjct: 305 VYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSL 363
Query: 538 LYLSLAENRLEGMVPRSGICQNLSKI 563
L L++N L M I L +
Sbjct: 364 QTLVLSQNHLRSMQKTGEILLTLKNL 389
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 4e-36
Identities = 76/451 (16%), Positives = 145/451 (32%), Gaps = 47/451 (10%)
Query: 2 LSFNALSGSLPEELSDLPILTF-AAEKNQLSG-SLPSWLGNWNQMESLLLSSNQFIGKIP 59
LS N LS L L + N + S N +++L + + + +I
Sbjct: 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIR 140
Query: 60 PE-IGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQ 118
+ L + + L + L + + + L + +E + S++
Sbjct: 141 RIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRY 200
Query: 119 LVIFRNHIYG---------SIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAA 169
L + ++ + + KL L +F + + L E
Sbjct: 201 LELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNEL-LKLLRYILELSEVEFD 259
Query: 170 NNLLEGSLPYEVGNAAA-----------LERLVLTNNMLKGHLPKEIGNLSALSVLDLNS 218
+ L G + + + RL + L L L + + + +
Sbjct: 260 DCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVEN 319
Query: 219 NLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEK---IADLAQLQCLVLSHNNLSGPIPS 275
+ + SL LDL N + + LQ LVLS N+L +
Sbjct: 320 SKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRS-MQK 378
Query: 276 KPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPG 335
+ +L+ + D+S N P+P+ + L L++ + +
Sbjct: 379 TGEIL---LTLKNLTSL------DISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKT 427
Query: 336 SLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLN 395
+ L LD+S N L +LQ LY+ N+L ++P L+ +
Sbjct: 428 CI--PQTLEVLDVSNNNLDS-FSLFLP---RLQELYISRNKLK-TLP-DASLFPVLLVMK 479
Query: 396 LTGNKLSGKVPTSFGNLKELTHLDLSFNELD 426
++ N+L F L L + L N D
Sbjct: 480 ISRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 510
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 1e-25
Identities = 53/295 (17%), Positives = 100/295 (33%), Gaps = 18/295 (6%)
Query: 315 SCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGN 374
V D + + IP L+ + +LDLS N++T + LQ L L +
Sbjct: 5 DASGVCDG--RSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKS 59
Query: 375 NQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDG-QLPSSL 433
+++ + SLG L L+L+ N LS + FG L L +L+L N + S
Sbjct: 60 SRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLF 119
Query: 434 SNILNLVGLYLQH-NKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNL 492
N+ NL L + + S F+ + + + +SL ++ + +L
Sbjct: 120 PNLTNLQTLRIGNVETFSEIRRIDFAGLT--SLNELEIKALSLRNYQSQSLKSIRDIHHL 177
Query: 493 DLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVP 552
LH ++ + L + YL++ L + + R +
Sbjct: 178 TLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTD 237
Query: 553 RSGIC--------QNLSKISLTGNKDLCGKIIGSNCQVKTFGKLALLHAFGLAGL 599
S LS++ + + +L + + L
Sbjct: 238 ESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPS-ESDVVSELGKVETVTIRRL 291
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 194 bits (495), Expect = 1e-55
Identities = 63/291 (21%), Positives = 115/291 (39%), Gaps = 39/291 (13%)
Query: 685 NIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGY 743
++G G FG K G+ + +K+L + + R F E++ + ++H N++ +G
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 744 CSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHI 803
D+ + EY+ G+L +++ W +R A A G+A+LH + +I
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQYP---WSQRVSFAKDIASGMAYLH---SMNI 129
Query: 804 IHRDIKASNILLNEEFEAKVADFGLARLISACETH-------------VSTDIAGTFGYI 850
IHRD+ + N L+ E VADFGLARL+ +T + G ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 851 PPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910
PE + DV+SFG++L E++
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGRVNA-----------------DPDYLPRTMDF 232
Query: 911 VLDPTVLTADSKPMML--KMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
L+ P I C +P RP+ + + +L+ +++
Sbjct: 233 GLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 197 bits (504), Expect = 4e-55
Identities = 109/505 (21%), Positives = 193/505 (38%), Gaps = 75/505 (14%)
Query: 45 ESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTG 104
S ++ + I +I + L ++ ++ + + + D +
Sbjct: 4 GSATITQDTPINQIFT-DTALAEKMKTVLGKTNVTDTVSQTDLDQ--VTTLQADRLGIK- 59
Query: 105 TIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETL 163
+I+G E +NL+Q+ N + P L L L+ + +++N I P++ N L
Sbjct: 60 SIDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNL 114
Query: 164 MEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDG 223
+ NN + P + N L RL L++N + + L++L L + + D
Sbjct: 115 TGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFGNQVTD- 169
Query: 224 IIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQ 283
+ P L + +L LD+ +N +S + +A L L+ L+ ++N +S P
Sbjct: 170 LKP--LANLTTLERLDISSNKVSDISV--LAKLTNLESLIATNNQISDITP--------L 217
Query: 284 ANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNL 343
+ +L + L+ N+L L S + DL L NN +S P LS LT L
Sbjct: 218 GILTNLDEL------SLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKL 267
Query: 344 TTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSG 403
T L L NQ++ P L L L NQL P + +L L L L N +S
Sbjct: 268 TELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISD 323
Query: 404 KVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAW 463
+ +L +L L N++ SSL+N+ N+ L HN++S
Sbjct: 324 --ISPVSSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQISDL----------- 368
Query: 464 KIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRL 523
L NL+ +T L L++ +T P + + + +
Sbjct: 369 -----------------TPLANLTRITQLGLNDQAWTN-APVNYKANVSIPNTVKNVTGA 410
Query: 524 CGQIPETMCSLSNLLYLSLAENRLE 548
P T+ + + N
Sbjct: 411 -LIAPATISDGGSYTEPDITWNLPS 434
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 192 bits (491), Expect = 2e-53
Identities = 110/483 (22%), Positives = 183/483 (37%), Gaps = 59/483 (12%)
Query: 27 KNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPREL 86
K ++ ++ + +Q+ +L K + + L I+ SNN L+ P L
Sbjct: 33 KTNVTDTVS--QTDLDQVTTLQADRLGI--KSIDGVEYLNNLTQINFSNNQLTDITP--L 86
Query: 87 CTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLD 145
L +I ++ N + +NL+ L +F N I P L L L L+L
Sbjct: 87 KNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELS 142
Query: 146 SNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEI 205
SN + I +S +L + S N + + + N LERL +++N + +
Sbjct: 143 SNTISDISALS--GLTSLQQLSFGNQVTDLK---PLANLTTLERLDISSNKVSD--ISVL 195
Query: 206 GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLS 265
L+ L L +N I P LG +L L L N L + +A L L L L+
Sbjct: 196 AKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGT--LASLTNLTDLDLA 251
Query: 266 HNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLN 325
+N +S P + + L+ + L N++S P L + +L LN
Sbjct: 252 NNQISNLAP--------LSGLTKLTEL------KLGANQISNISP--LAGLTALTNLELN 295
Query: 326 NNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSL 385
N L P +S L NLT L L N ++ P KLQ L+ NN+++ SL
Sbjct: 296 ENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD--VSSL 349
Query: 386 GSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQ 445
+L + L+ N++S T NL +T L L+ + +N+ +
Sbjct: 350 ANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 407
Query: 446 HNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSY----LTNLDLHENKFTG 501
L P S+ + + LP +SY + F+G
Sbjct: 408 TGALIAP--ATISDGG-------SYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSG 458
Query: 502 EIP 504
+
Sbjct: 459 TVT 461
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 191 bits (487), Expect = 7e-53
Identities = 89/426 (20%), Positives = 172/426 (40%), Gaps = 48/426 (11%)
Query: 144 LDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPK 203
I + M+ + ++ + + L +K
Sbjct: 9 TQDTPINQIFTDT--ALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS--ID 62
Query: 204 EIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLV 263
+ L+ L+ ++ ++N I P L + L + + NN ++ + P +A+L L L
Sbjct: 63 GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118
Query: 264 LSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLL 323
L +N ++ P N+ +L+ +LS N +S L + L
Sbjct: 119 LFNNQITDIDP--------LKNLTNLN------RLELSSNTISDI--SALSGLTSLQQLS 162
Query: 324 LNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPW 383
N + L+ LT L LD+S N+++ S L+ L NNQ++ P
Sbjct: 163 FGNQVTD---LKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP- 216
Query: 384 SLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLY 443
LG L L +L+L GN+L + +L LT LDL+ N++ + LS + L L
Sbjct: 217 -LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISN--LAPLSGLTKLTELK 271
Query: 444 LQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEI 503
L N++S + L + + + ++ N + + NL LT L L+ N +
Sbjct: 272 LGANQISN-ISPLAGLT---ALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS 325
Query: 504 PPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKI 563
P + +L +L+ L N++ ++ +L+N+ +LS N++ + P + ++++
Sbjct: 326 P--VSSLTKLQRLFFYNNKV--SDVSSLANLTNINWLSAGHNQISDLTPLAN-LTRITQL 380
Query: 564 SLTGNK 569
L
Sbjct: 381 GLNDQA 386
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 186 bits (474), Expect = 3e-51
Identities = 99/438 (22%), Positives = 174/438 (39%), Gaps = 50/438 (11%)
Query: 134 LSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVL 192
+ L M L N T + + + + + A ++ S+ V L ++
Sbjct: 20 DTALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIK-SID-GVEYLNNLTQINF 75
Query: 193 TNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEK 252
+NN L P + NL+ L + +N+N I P L + +LT L L NN ++ + P
Sbjct: 76 SNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-- 129
Query: 253 IADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEE 312
+ +L L L LS N +S + + L + N+++ P
Sbjct: 130 LKNLTNLNRLELSSNTISDISA--------LSGLTSLQQL------SFG-NQVTDLKP-- 172
Query: 313 LGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYL 372
L + + L +++N +S L++LTNL +L + NQ++ P G L L L
Sbjct: 173 LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 228
Query: 373 GNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSS 432
NQL +L SL L L+L N++S P L +LT L L N++ S
Sbjct: 229 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN--ISP 282
Query: 433 LSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNL 492
L+ + L L L N+L + + + + + + N P + +L+ L L
Sbjct: 283 LAGLTALTNLELNENQLED-ISPISNLK---NLTYLTLYFNNISDISP--VSSLTKLQRL 336
Query: 493 DLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVP 552
+ NK + L NL + +L N++ P + +L+ + L L +
Sbjct: 337 FFYNNKVSD--VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPV 392
Query: 553 RSGICQNLSKISLTGNKD 570
N+S + N
Sbjct: 393 --NYKANVSIPNTVKNVT 408
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 165 bits (421), Expect = 3e-44
Identities = 90/383 (23%), Positives = 150/383 (39%), Gaps = 43/383 (11%)
Query: 187 LERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLS 246
L +T + + L+ L + D +TTL +
Sbjct: 3 LGSATITQDTPINQIFT-DTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK 59
Query: 247 GLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLS 306
+ + + L L + S+N L+ P K N+ L I ++ N+++
Sbjct: 60 SI--DGVEYLNNLTQINFSNNQLTDITPLK--------NLTKLVDI------LMNNNQIA 103
Query: 307 GPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK 366
P L + + L L NN ++ P L LTNL L+LS N ++
Sbjct: 104 DITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISA--LSGLTS 157
Query: 367 LQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELD 426
LQ L GN L +L L +L+++ NK+S + L L L + N++
Sbjct: 158 LQQLSFGNQVTDLK---PLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQIS 212
Query: 427 GQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNL 486
+ L + NL L L N+L + L S + + ++++NN L L L
Sbjct: 213 D--ITPLGILTNLDELSLNGNQLKD-IGTLASLT---NLTDLDLANNQISN-LA-PLSGL 264
Query: 487 SYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENR 546
+ LT L L N+ + P L L L L+++ N+L P + +L NL YL+L N
Sbjct: 265 TKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNN 320
Query: 547 LEGMVPRSGICQNLSKISLTGNK 569
+ + P S L ++ NK
Sbjct: 321 ISDISPVSS-LTKLQRLFFYNNK 342
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 6e-43
Identities = 99/426 (23%), Positives = 162/426 (38%), Gaps = 47/426 (11%)
Query: 2 LSFNALSGSLPEELSDLPILTF-AAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
S N L+ L +L L NQ++ P L N + L L +NQ I I P
Sbjct: 75 FSNNQLTDI--TPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQ-ITDIDP 129
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
+ N + L + LS+N +S L SL+++ + ++ + L +L
Sbjct: 130 -LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFGNQVTD--LKP-LANLTTLERLD 183
Query: 121 IFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPY 179
I N + S L+KL L L +N + I P + L E S N L+
Sbjct: 184 ISSNKV--SDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IG 237
Query: 180 EVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLD 239
+ + L L L NN + P + L+ L+ L L +N I P L +LT L+
Sbjct: 238 TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLE 293
Query: 240 LGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFD 299
L N L + P I++L L L L NN+S P +++ L
Sbjct: 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISPV--------SSLTKLQ------RLF 337
Query: 300 LSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPS 359
N++S L + + L +N +S P L+ LT +T L L+ T +
Sbjct: 338 FYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVN 393
Query: 360 EFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLS--GKVPTSFGNLKELTH 417
+ + L P ++ G + ++T N S +V +F +
Sbjct: 394 YKANVSIPNTVKNVTGALI--APATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGK 451
Query: 418 LDLSFN 423
+F+
Sbjct: 452 GTTTFS 457
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 198 bits (505), Expect = 2e-54
Identities = 117/541 (21%), Positives = 192/541 (35%), Gaps = 58/541 (10%)
Query: 45 ESLLLSSNQFIGKIPPEI-GNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLT 103
++L LS N + + + L+ + LS + + L + L GN +
Sbjct: 31 KNLDLSFNP-LRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89
Query: 104 GTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSET 162
G F S+L +LV ++ + L L L++ N
Sbjct: 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF---------- 139
Query: 163 LMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSV----LDLNS 218
LP N LE L L++N ++ ++ L + + LDL+
Sbjct: 140 -------------KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186
Query: 219 NLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEK-IADLAQLQCLVLSHNNL--SGPIPS 275
N + I I L L L NN S + + I LA L+ L G +
Sbjct: 187 NPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEK 245
Query: 276 KPSSYFRQANMPDLSFIQHHGVFDLSYNRLSG-PIPEELGSCVVVVDLLLNNNMLSGKIP 334
S + +L+ + F L+Y I + V L + + ++
Sbjct: 246 FDKSALE--GLCNLTIEE----FRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVK 298
Query: 335 GSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKL 394
S L+L + + L+ L +N+ + S L L L
Sbjct: 299 -DFSYNFGWQHLELVNCKFGQFPTLKLKS---LKRLTFTSNKGGNAF--SEVDLPSLEFL 352
Query: 395 NLTGNKLS--GKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSG- 451
+L+ N LS G S L +LDLSFN + + S+ + L L QH+ L
Sbjct: 353 DLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQM 411
Query: 452 PVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPD-LGNL 510
+F + + +++S+ LS L L + N F PD L
Sbjct: 412 SEFSVFLSLR--NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTEL 469
Query: 511 MQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS--GICQNLSKISLTGN 568
L +LD+S+ +L P SLS+L L++A N+L+ VP +L KI L N
Sbjct: 470 RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLK-SVPDGIFDRLTSLQKIWLHTN 528
Query: 569 K 569
Sbjct: 529 P 529
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 197 bits (503), Expect = 4e-54
Identities = 104/541 (19%), Positives = 175/541 (32%), Gaps = 69/541 (12%)
Query: 28 NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPE-IGNCSMLKSISLSNNFLSGSIPREL 86
N L ++ +++ L LS + I I + S L ++ L+ N +
Sbjct: 38 NPLRHLGSYSFFSFPELQVLDLSRCE-IQTIEDGAYQSLSHLSTLILTGNPIQSLALGAF 96
Query: 87 CTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHI-YGSIPEYLSKLP-LMVLDL 144
SL+++ L L +L + N I +PEY S L L LDL
Sbjct: 97 SGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDL 156
Query: 145 DSNNFTGIIPVSIWN----SETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGH 200
SN I + + + N + + L +L L NN +
Sbjct: 157 SSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLHKLTLRNNFDSLN 215
Query: 201 LPKE-IGNLSALSVLDLNSNLFDG---IIPYELGDCISLTTLDLGNNNLSGL------IP 250
+ K I L+ L V L F + ++ L L + L+ L I
Sbjct: 216 VMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDII 275
Query: 251 EKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIP 310
+ L + L + + D S+ +L +
Sbjct: 276 DLFNCLTNVSSFSLVSVTIE--------------RVKDFSYNFGWQHLELVNCKFGQFPT 321
Query: 311 EELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLT--GPIPSEFGDSIKLQ 368
+L S L +N S L +L LDLSRN L+ G + L+
Sbjct: 322 LKLKSLKR---LTFTSNKGGN--AFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLK 376
Query: 369 GLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTS-FGNLKELTHLDLSFNELDG 427
L L N + ++ + L L L+ + L S F +L+ L +LD+S
Sbjct: 377 YLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV 435
Query: 428 QLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLS 487
+ + +L L + N LP L
Sbjct: 436 AFNGIFNGLSSLEVLKMAGNSFQENF-------------------------LPDIFTELR 470
Query: 488 YLTNLDLHENKFTGEIPPD-LGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENR 546
LT LDL + + ++ P +L L+ L+++ N+L L++L + L N
Sbjct: 471 NLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNP 529
Query: 547 L 547
Sbjct: 530 W 530
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 2e-42
Identities = 83/400 (20%), Positives = 141/400 (35%), Gaps = 39/400 (9%)
Query: 187 LERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLS 246
+ L L+ N L+ + L VLDL+ I L+TL L N +
Sbjct: 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89
Query: 247 GLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRL- 305
L + L+ LQ LV NL+ S + ++ L + ++++N +
Sbjct: 90 SLALGAFSGLSSLQKLVAVETNLA----SLENFPIG--HLKTLKEL------NVAHNLIQ 137
Query: 306 SGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLT----TLDLSRNQLTGPIPSEF 361
S +PE + + L L++N + L L + +LDLS N + I
Sbjct: 138 SFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGA 196
Query: 362 GDSIKLQGLYLGNNQLTGSIPW-SLGSLGGLVKLNLTG------NKLSGKVPTSFGNLKE 414
I+L L L NN + ++ + L GL L L ++ L
Sbjct: 197 FKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCN 256
Query: 415 LTHLDLSFNELDG---QLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMS 471
LT + LD + + + N+ L + + S + + +
Sbjct: 257 LTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE----RVKDFSYNFGWQHLELV 312
Query: 472 NNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRL--CGQIPE 529
N F L + L L NK +L LE+LD+SRN L G +
Sbjct: 313 NCKFGQFPTLKLKS---LKRLTFTSNKGGN--AFSEVDLPSLEFLDLSRNGLSFKGCCSQ 367
Query: 530 TMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNK 569
+ ++L YL L+ N + M + L + +
Sbjct: 368 SDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSN 407
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 1e-39
Identities = 88/446 (19%), Positives = 141/446 (31%), Gaps = 42/446 (9%)
Query: 2 LSFNALSGSLPEELSDLPILTF-AAEKNQL-SGSLPSWLGNWNQMESLLLSSNQFIGKIP 59
L+ + L L N + S LP + N +E L LSSN+
Sbjct: 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166
Query: 60 PEIGNCSMLK----SISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTI-EGVFEKCS 114
++ + S+ LS N ++ I L ++ L N + + + + +
Sbjct: 167 TDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLA 225
Query: 115 NLSQLVIFRNHIYG---------SIPEYLSKLPLMVLDLDSNN-FTGIIPVSIWNSETLM 164
L + S E L L + L + + I +
Sbjct: 226 GLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVS 285
Query: 165 EFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGI 224
FS + +E + N + L L N P L +L L SN
Sbjct: 286 SFSLVSVTIE-RVKDFSYNFG-WQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNA 340
Query: 225 IPYELGDCISLTTLDLGNNNLS--GLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFR 282
D SL LDL N LS G + L+ L LS N + + S
Sbjct: 341 FS--EVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFL---- 393
Query: 283 QANMPDLSFIQHHGVFDLSYNRLSG-PIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLT 341
+ L + D ++ L S ++ L +++ G + L+
Sbjct: 394 --GLEQLEHL------DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS 445
Query: 342 NLTTLDLSRNQLTGPIPSE-FGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNK 400
+L L ++ N + F + L L L QL P + SL L LN+ N+
Sbjct: 446 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505
Query: 401 LSGKVPTSFGNLKELTHLDLSFNELD 426
L F L L + L N D
Sbjct: 506 LKSVPDGIFDRLTSLQKIWLHTNPWD 531
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 2e-31
Identities = 60/312 (19%), Positives = 94/312 (30%), Gaps = 35/312 (11%)
Query: 295 HGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLT 354
+ + IP+ L L L+ N L S L LDLSR ++
Sbjct: 9 NITYQCMELNFYK-IPDNLPFSTKN--LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ 65
Query: 355 GPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKE 414
+ L L L N + + L L KL L+ G+LK
Sbjct: 66 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 125
Query: 415 LTHLDLSFNEL-DGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNN 473
L L+++ N + +LP SN+ NL L L NK+
Sbjct: 126 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV-------------- 171
Query: 474 LFDGGLPRSLGNLSYLTN-LDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMC 532
L + L LDL N I P ++L L + N + +T
Sbjct: 172 ---------LHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLHKLTLRNNFDSLNVMKTCI 221
Query: 533 S-LSNLLYLSLAENRLEGM----VPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTFGK 587
L+ L L + L +++ L + + F
Sbjct: 222 QGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEF-RLAYLDYYLDDIIDLFNC 280
Query: 588 LALLHAFGLAGL 599
L + +F L +
Sbjct: 281 LTNVSSFSLVSV 292
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 186 bits (475), Expect = 7e-53
Identities = 55/288 (19%), Positives = 106/288 (36%), Gaps = 40/288 (13%)
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGH--REFTAEMETLGKVKHQNLVPLLG 742
+IG G FG VY VA++ + + + F E+ + +H+N+V +G
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH 802
C ++ +L +R+ L+ +K +IA +G+ +LH
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLD---VNKTRQIAQEIVKGMGYLH---AKG 150
Query: 803 IIHRDIKASNILLNEEFEAKVADFGLARLISACE----THVSTDIAGTFGYIPPE----- 853
I+H+D+K+ N+ + + + DFGL + + G ++ PE
Sbjct: 151 ILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQL 209
Query: 854 ----YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909
+ DV++ G I EL + P FK ++ + MK
Sbjct: 210 SPDTEEDKLPFSKHSDVFALGTIWYELHAREWP----FKTQPAEAIIWQMGTGMK----- 260
Query: 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957
P + + +L C + RPT ++ L+++
Sbjct: 261 ----PNLSQIGMGKEISDILL---FCWAFEQEERPTFTKLMDMLEKLP 301
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 195 bits (498), Expect = 6e-52
Identities = 127/672 (18%), Positives = 212/672 (31%), Gaps = 105/672 (15%)
Query: 2 LSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPE 61
F L+ +P+ L+ L N + S Q++ L L S I E
Sbjct: 11 YRFCNLT-QVPQVLNTTERLLL--SFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKE 67
Query: 62 I-GNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTI--EGVFEKCSNLSQ 118
N L+ + L ++ + P L E+ L L+ + +G F L++
Sbjct: 68 AFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127
Query: 119 LVIFRNHIYG-SIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWN--SETLMEFSAANNLLE 174
L + +N I + KL L +D SN + + +TL FS A N L
Sbjct: 128 LDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLY 187
Query: 175 GSLPYEVGNAA------ALERLVLTNNMLKGHLPKEIGN------------LSALSVLDL 216
+ + G LE L ++ N + N +
Sbjct: 188 SRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGF 247
Query: 217 NSNLFDGIIPYELG--DCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIP 274
+ S+ LDL + + L L L+ L L++N ++
Sbjct: 248 GFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKIN---- 303
Query: 275 SKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIP 334
F + +L + +LSYN L V + L N ++
Sbjct: 304 KIADEAFY--GLDNLQVL------NLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQD 355
Query: 335 GSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKL 394
+ L L TLDL N LT + ++L N+L +L + +
Sbjct: 356 QTFKFLEKLQTLDLRDNALT-----TIHFIPSIPDIFLSGNKLVTLPKINLTAN----LI 406
Query: 395 NLTGNKLSG-KVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVGLYLQHNKLSGP 452
+L+ N+L + + L L L+ N + +L L+L N L
Sbjct: 407 HLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLA 466
Query: 453 VDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPD-LGNLM 511
+ LS+L L L+ N +PP +L
Sbjct: 467 WETELC---------------------WDVFEGLSHLQVLYLNHNYLN-SLPPGVFSHLT 504
Query: 512 QLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDL 571
L L ++ NRL + +NL L ++ N+L P + +LS + +T NK +
Sbjct: 505 ALRGLSLNSNRLT-VLSHND-LPANLEILDISRNQLL--APNPDVFVSLSVLDITHNKFI 560
Query: 572 CGKIIGSNCQVKTFGKLALLHAFGLAGLVVGCVFIVLTTVIALRKQIKRRSRCSDPEEIE 631
C C++ TF +AG C P+
Sbjct: 561 C------ECELSTFINWLNHTNVTIAGPPADI-------------------YCVYPDSFS 595
Query: 632 ETKLNSFSDHNL 643
L S S
Sbjct: 596 GVSLFSLSTEGC 607
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 180 bits (459), Expect = 5e-47
Identities = 103/528 (19%), Positives = 184/528 (34%), Gaps = 61/528 (11%)
Query: 65 CSMLKSIS-LSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFR 123
CS I+ L+ +P+ L + E + L N + F L L +
Sbjct: 2 CSFDGRIAFYRFCNLT-QVPQVL---NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGS 57
Query: 124 NHIYGSIPEY-LSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSL--PY 179
+ +I + LP L +LDL S+ + P + L E L ++
Sbjct: 58 QYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDG 117
Query: 180 EVGNAAALERLVLTNNMLKG-HLPKEIGNLSALSVLDLNSNLFDGIIPYELGD--CISLT 236
N AL RL L+ N ++ +L G L++L +D +SN + +EL +L+
Sbjct: 118 YFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLS 177
Query: 237 TLDLGNNNLSGLIPEKIADLAQ------LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLS 290
L N+L + L+ L +S N + I S+ ++ L
Sbjct: 178 FFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLI 237
Query: 291 FIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSR 350
H ++ + + N +G +++ LDLS
Sbjct: 238 LAHHIMGAGFGFHNIKD----------------PDQNTFAG------LARSSVRHLDLSH 275
Query: 351 NQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFG 410
+ F L+ L L N++ + L L LNL+ N L ++F
Sbjct: 276 GFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFY 335
Query: 411 NLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNM 470
L ++ ++DL N + + + L L L+ N L+ + I + +
Sbjct: 336 GLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALT-------TIHFIPSIPDIFL 388
Query: 471 SNNLFDGGLPRSLGNLS-YLTNLDLHENKFTG-EIPPDLGNLMQLEYLDVSRNRLCGQIP 528
S N +L ++ + L EN+ +I L + L+ L +++NR
Sbjct: 389 SGNKL-----VTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSG 443
Query: 529 ETMCS-LSNLLYLSLAENRLEGMVPRS------GICQNLSKISLTGNK 569
+ S +L L L EN L+ +L + L N
Sbjct: 444 DQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNY 491
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 172 bits (437), Expect = 3e-44
Identities = 115/660 (17%), Positives = 206/660 (31%), Gaps = 100/660 (15%)
Query: 2 LSFNALSGSLPEE----LSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGK 57
L ++ +E L +L IL +++ P + L L
Sbjct: 55 LGSQYTPLTIDKEAFRNLPNLRILDLG--SSKIYFLHPDAFQGLFHLFELRLYFCGLSDA 112
Query: 58 IPPE--IGNCSMLKSISLSNNFLSG-SIPRELCTSESLEEIDLDGNLLTGTIEGVFE--K 112
+ + N L + LS N + + SL+ ID N + E E +
Sbjct: 113 VLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQ 172
Query: 113 CSNLSQLVIFRNHIYGSIPEYLSKLP-------LMVLDLDSNNFTGIIPVSIWNSET--- 162
LS + N +Y + K L +LD+ N +T I + N+ +
Sbjct: 173 GKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQ 232
Query: 163 LMEFSAANNLLEGSLPY-----------EVGNAAALERLVLTNNMLKGHLPKEIGNLSAL 211
A++++ + +++ L L++ + + L L
Sbjct: 233 AFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDL 292
Query: 212 SVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSG 271
VL+L N + I +L L+L N L L L ++ + L N+++
Sbjct: 293 KVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIA- 351
Query: 272 PIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSG 331
F+ L +Q DL N L+ + + D+ L+ N L
Sbjct: 352 ---IIQDQTFK-----FLEKLQT---LDLRDNALT-----TIHFIPSIPDIFLSGNKLVT 395
Query: 332 KIPGSLSRLTNLTTLDLSRNQLTG-PIPSEFGDSIKLQGLYLGNNQLTG-SIPWSLGSLG 389
+L+ + LS N+L I LQ L L N+ + S +
Sbjct: 396 LPKINLT----ANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENP 451
Query: 390 GLVKLNLTGNKLSGKVPTS-----FGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYL 444
L +L L N L T F L L L L+ N L+ P S++ L GL L
Sbjct: 452 SLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSL 511
Query: 445 QHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIP 504
N+L+ + L LD+ N+
Sbjct: 512 NSNRLTVLSHNDLPAN----------------------------LEILDISRNQLL-APN 542
Query: 505 PDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKIS 564
PD + L LD++ N+ +C +++ + + + S
Sbjct: 543 PD--VFVSLSVLDITHNKF-------ICECELSTFINWLNHTNVTIAGPPADIYCVYPDS 593
Query: 565 LTGNKDLCGKIIGSNCQVKTFGKLALLHAFGLAGLVVGCVFIVLTTVIALRKQIKRRSRC 624
+G + C + K F + + + + + TV R +
Sbjct: 594 FSGVSLF--SLSTEGCDEEEVLKSLKFSLFIVCTVTLTLFLMTILTVTKFRGFCFICYKT 651
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 186 bits (474), Expect = 3e-51
Identities = 107/527 (20%), Positives = 190/527 (36%), Gaps = 93/527 (17%)
Query: 35 PSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPREL-------- 86
P + N ++ L S+ + ++P E N + + + P
Sbjct: 5 PRNVSN-TFLQEPLRHSSN-LTEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAV 62
Query: 87 -----CTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LM 140
C E++L+ L+ + E +L LV N + +PE L L+
Sbjct: 63 SRLRDCLDRQAHELELNNLGLS----SLPELPPHLESLVASCNSL-TELPELPQSLKSLL 117
Query: 141 VLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGH 200
V + + + + P L +NN LE LP E+ N++ L+ + + NN LK
Sbjct: 118 VDNNNLKALSDLPP-------LLEYLGVSNNQLE-KLP-ELQNSSFLKIIDVDNNSLK-K 167
Query: 201 LPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQ 260
LP + L + +N + +P EL + LT + NN+L L L+
Sbjct: 168 LPDLPPS---LEFIAAGNNQLE-ELP-ELQNLPFLTAIYADNNSLKKLPDL----PLSLE 218
Query: 261 CLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVV 320
+V +N L P+L + N L +P+ S
Sbjct: 219 SIVAGNNILEEL--------------PELQNLPFLTTIYADNNLLKT-LPDLPPSLEA-- 261
Query: 321 DLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGS 380
L + +N L+ +P LT L + + L+ P+ L L +N++ S
Sbjct: 262 -LNVRDNYLT-DLPELPQSLTFLDVSENIFSGLSELPPN-------LYYLNASSNEIR-S 311
Query: 381 IPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLV 440
+ L +LN++ NKL ++P L+ L SFN L ++P NL
Sbjct: 312 LC---DLPPSLEELNVSNNKLI-ELPALPPRLER---LIASFNHL-AEVPELPQ---NLK 360
Query: 441 GLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFT 500
L++++N L D S + + M+++L +P N L L + N
Sbjct: 361 QLHVEYNPLREFPDIPES------VEDLRMNSHL--AEVPELPQN---LKQLHVETNPLR 409
Query: 501 GEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRL 547
E P + +E L ++ R+ + L +
Sbjct: 410 -EFPDIPES---VEDLRMNSERVVDPYEFAHETTDKLEDDVFEHHHH 452
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 2e-45
Identities = 107/512 (20%), Positives = 176/512 (34%), Gaps = 107/512 (20%)
Query: 58 IPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLS 117
I P + + L+ ++ L+ +P E +S E + + ++
Sbjct: 3 INPRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMA 61
Query: 118 QLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSL 177
+ L+L++ + SL
Sbjct: 62 VSRLRDCLDRQ----------AHELELNNLGLS-------------------------SL 86
Query: 178 PYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTT 237
P + LE LV + N L LP+ +L +L V + N + P L
Sbjct: 87 PELPPH---LESLVASCNSLT-ELPELPQSLKSLLVDNNNLKALSDLPP-------LLEY 135
Query: 238 LDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGV 297
L + NN L L PE + + + L+ + + +N+L +P P S L FI
Sbjct: 136 LGVSNNQLEKL-PE-LQNSSFLKIIDVDNNSLKK-LPDLPPS---------LEFI----- 178
Query: 298 FDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPI 357
N+L +P EL + + + +NN L K+P +L ++ N L
Sbjct: 179 -AAGNNQLEE-LP-ELQNLPFLTAIYADNNSLK-KLPDLPL---SLESIVAGNNILE--E 229
Query: 358 PSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTH 417
E + L +Y NN L ++P L LN+ N L+ +P +L L
Sbjct: 230 LPELQNLPFLTTIYADNNLLK-TLP---DLPPSLEALNVRDNYLT-DLPELPQSLTFLDV 284
Query: 418 LDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDG 477
+ F+ L P NL L N++ D S + +N+SNN
Sbjct: 285 SENIFSGLSELPP-------NLYYLNASSNEIRSLCDLPPS------LEELNVSNNKLI- 330
Query: 478 GLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNL 537
LP L L N E+P N L+ L V N L + P+ S+ +L
Sbjct: 331 ELPALPPR---LERLIASFNHLA-EVPELPQN---LKQLHVEYNPL-REFPDIPESVEDL 382
Query: 538 LYLSLAENRLEGMVPRSGICQNLSKISLTGNK 569
+ L VP QNL ++ + N
Sbjct: 383 RMN----SHLA-EVPEL--PQNLKQLHVETNP 407
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 3e-36
Identities = 86/421 (20%), Positives = 147/421 (34%), Gaps = 65/421 (15%)
Query: 2 LSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIP-- 59
L+ LS SLPE L L + N L+ LP + + + P
Sbjct: 78 LNNLGLS-SLPELPPHLESLVAS--CNSLT-ELPELPQSLKSLLVDNNNLKALSDLPPLL 133
Query: 60 -------------PEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTI 106
PE+ N S LK I + NN L +P SLE I N L
Sbjct: 134 EYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLK-KLPDLPP---SLEFIAAGNNQLEELP 189
Query: 107 EGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEF 166
E + L+ + N + +P+ L + +N + N L
Sbjct: 190 E--LQNLPFLTAIYADNNSL-KKLPDLPLSL--ESIVAGNNILE--ELPELQNLPFLTTI 242
Query: 167 SAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIP 226
A NNLL+ +LP + LE L + +N L LP+ +L+ L V + + + P
Sbjct: 243 YADNNLLK-TLPDLPPS---LEALNVRDNYLT-DLPELPQSLTFLDVSENIFSGLSELPP 297
Query: 227 YELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSS----YFR 282
+L L+ +N + L L+ L +S+N L +P+ P
Sbjct: 298 -------NLYYLNASSNEIRSLCDL----PPSLEELNVSNNKLIE-LPALPPRLERLIAS 345
Query: 283 QANMPDL-SFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLT 341
++ ++ Q+ + YN L P+ S DL +N+++ +P
Sbjct: 346 FNHLAEVPELPQNLKQLHVEYNPLRE-FPDIPESVE---DLRMNSHLAE--VP---ELPQ 396
Query: 342 NLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKL 401
NL L + N L P ++ L + + ++ ++ + L +
Sbjct: 397 NLKQLHVETNPLRE-FPDIPE---SVEDLRMNSERVVDPYEFAHETTDKLEDDVFEHHHH 452
Query: 402 S 402
Sbjct: 453 H 453
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 7e-29
Identities = 59/337 (17%), Positives = 104/337 (30%), Gaps = 65/337 (19%)
Query: 248 LIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSG 307
I + LQ + +NL+ P + + +++
Sbjct: 2 FINPRNVSNTFLQEPLRHSSNLT----EMPVEAENVKSKTEY---------YNAWSEWER 48
Query: 308 PIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKL 367
P G + L + L+L+ L+ +P L
Sbjct: 49 NAPPGNGEQREMAVSRLRDC-----------LDRQAHELELNNLGLS-SLPELPP---HL 93
Query: 368 QGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPT---------------SFGNL 412
+ L N LT +P SL L+ N LS P N
Sbjct: 94 ESLVASCNSLT-ELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNS 152
Query: 413 KELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSN 472
L +D+ N L +LP +L + +N+L EL + + N
Sbjct: 153 SFLKIIDVDNNSLK-KLPDLPP---SLEFIAAGNNQLE----ELPELQNLPFLTAIYADN 204
Query: 473 NLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMC 532
N LP + L ++ N P+L NL L + N L +P+
Sbjct: 205 NSLK-KLPDLPLS---LESIVAGNNILE--ELPELQNLPFLTTIYADNNLL-KTLPD--- 254
Query: 533 SLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNK 569
+L L++ +N L + + Q+L+ + ++ N
Sbjct: 255 LPPSLEALNVRDNYLTDL---PELPQSLTFLDVSENI 288
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 182 bits (465), Expect = 4e-51
Identities = 67/365 (18%), Positives = 147/365 (40%), Gaps = 38/365 (10%)
Query: 205 IGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVL 264
+L+ L ++ + S+T L + ++ + + I L L+ L L
Sbjct: 18 DADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVASI--QGIEYLTNLEYLNL 73
Query: 265 SHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLL 324
+ N ++ P N+ L+ + + N+++ L + + +L L
Sbjct: 74 NGNQITDISPLS--------NLVKLTNL------YIGTNKIT--DISALQNLTNLRELYL 117
Query: 325 NNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWS 384
N + +S P L+ LT + +L+L N S + L L + +++ P
Sbjct: 118 NEDNISDISP--LANLTKMYSLNLGANHNLS-DLSPLSNMTGLNYLTVTESKVKDVTP-- 172
Query: 385 LGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYL 444
+ +L L L+L N++ + +L L + N++ + ++N+ L L +
Sbjct: 173 IANLTDLYSLSLNYNQIED--ISPLASLTSLHYFTAYVNQITD--ITPVANMTRLNSLKI 228
Query: 445 QHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIP 504
+NK++ + L + S ++ + + N ++ +L+ L L++ N+ +
Sbjct: 229 GNNKITD-LSPLANLS---QLTWLEIGTNQISD--INAVKDLTKLKMLNVGSNQISD--I 280
Query: 505 PDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKIS 564
L NL QL L ++ N+L + E + L+NL L L++N + + P + +
Sbjct: 281 SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLAS-LSKMDSAD 339
Query: 565 LTGNK 569
Sbjct: 340 FANQV 344
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 181 bits (463), Expect = 6e-51
Identities = 81/410 (19%), Positives = 152/410 (37%), Gaps = 65/410 (15%)
Query: 139 LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLK 198
L I P + + + + + ++ +LV+ +
Sbjct: 2 AATLATLPAPINQIFPDA--DLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVA 57
Query: 199 GHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQ 258
+ I L+ L L+LN N I P L + + LT L +G N ++ + + +L
Sbjct: 58 S--IQGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDISA--LQNLTN 111
Query: 259 LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVV 318
L+ L L+ +N+S P AN+ + +L N L +
Sbjct: 112 LRELYLNEDNISDISPL--------ANLTKMY------SLNLGANHNLS-DLSPLSNMTG 156
Query: 319 VVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLT 378
+ L + + + P ++ LT+L +L L+ NQ+ P L NQ+T
Sbjct: 157 LNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQIT 212
Query: 379 GSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILN 438
P + ++ L L + NK++ + NL +LT L++ N++ +++ ++
Sbjct: 213 DITP--VANMTRLNSLKIGNNKITD--LSPLANLSQLTWLEIGTNQISD--INAVKDLTK 266
Query: 439 LVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENK 498
L L + N++S L NLS L +L L+ N+
Sbjct: 267 LKMLNVGSNQISDI----------------------------SVLNNLSQLNSLFLNNNQ 298
Query: 499 FTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLE 548
E +G L L L +S+N + P + SLS + A ++
Sbjct: 299 LGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 7e-47
Identities = 83/434 (19%), Positives = 158/434 (36%), Gaps = 90/434 (20%)
Query: 68 LKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIY 127
+++ ++ P L +T + E+ ++++LV+ +
Sbjct: 2 AATLATLPAPINQIFP--DADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKV- 56
Query: 128 GSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAA 186
SI + L L L+L+ N T I P+S N
Sbjct: 57 ASIQG-IEYLTNLEYLNLNGNQITDISPLS--------------------------NLVK 89
Query: 187 LERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLS 246
L L + N + + NL+ L L LN + I P L + + +L+LG N+
Sbjct: 90 LTNLYIGTNKITD--ISALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNL 145
Query: 247 GLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLS 306
+ ++++ L L ++ + + P N+ DL + L+YN++
Sbjct: 146 SDLSP-LSNMTGLNYLTVTESKVKDVTPIA--------NLTDLYSL------SLNYNQIE 190
Query: 307 GPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK 366
P L S + N ++ P ++ +T L +L + N++T P + +
Sbjct: 191 DISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQ 244
Query: 367 LQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELD 426
L L +G NQ++ I ++ L L LN+ N++S + NL +L L L+ N+L
Sbjct: 245 LTWLEIGTNQIS-DIN-AVKDLTKLKMLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLG 300
Query: 427 GQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNL 486
+ + + NL L+L N ++ R L +L
Sbjct: 301 NEDMEVIGGLTNLTTLFLSQNHITD----------------------------IRPLASL 332
Query: 487 SYLTNLDLHENKFT 500
S + + D
Sbjct: 333 SKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 7e-46
Identities = 76/366 (20%), Positives = 138/366 (37%), Gaps = 38/366 (10%)
Query: 38 LGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDL 97
+ + +L + + ++ ++ E T+ LE ++L
Sbjct: 18 DADLAEGIRAVLQKASVTD--VVTQEELESITKLVVAGEKVASIQGIEYLTN--LEYLNL 73
Query: 98 DGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVS 156
+GN +T L+ L I N I + L L L L L+ +N + I P++
Sbjct: 74 NGNQITDISP--LSNLVKLTNLYIGTNKI--TDISALQNLTNLRELYLNEDNISDISPLA 129
Query: 157 IWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDL 216
N + + N L + N L L +T + +K I NL+ L L L
Sbjct: 130 --NLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKD--VTPIANLTDLYSLSL 184
Query: 217 NSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSK 276
N N + I P L SL N ++ + P +A++ +L L + +N ++ P
Sbjct: 185 NYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSPL- 239
Query: 277 PSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGS 336
AN+ L+++ ++ N++S + + L + +N +S
Sbjct: 240 -------ANLSQLTWL------EIGTNQISDI--NAVKDLTKLKMLNVGSNQISD--ISV 282
Query: 337 LSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNL 396
L+ L+ L +L L+ NQL G L L+L N +T P L SL + +
Sbjct: 283 LNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADF 340
Query: 397 TGNKLS 402
+
Sbjct: 341 ANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 6e-30
Identities = 66/355 (18%), Positives = 122/355 (34%), Gaps = 83/355 (23%)
Query: 2 LSFNALSGSLPEELSDLPILT-FAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
L+ N ++ LS+L LT N+++ S L N + L L+ + I I P
Sbjct: 73 LNGNQITD--ISPLSNLVKLTNLYIGTNKITD--ISALQNLTNLRELYLNEDN-ISDISP 127
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
+ N + + S++L N + L L + + + + ++L L
Sbjct: 128 -LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLS 183
Query: 121 IFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPY 179
+ N I P L+ L L N T I P
Sbjct: 184 LNYNQIEDISP--LASLTSLHYFTAYVNQITDITP------------------------- 216
Query: 180 EVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLD 239
+ N++ L+ L + +N + P L + LT L+
Sbjct: 217 -------------------------VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLE 249
Query: 240 LGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFD 299
+G N +S + + DL +L+ L + N +S N+ L+
Sbjct: 250 IGTNQISDI--NAVKDLTKLKMLNVGSNQISDISV--------LNNLSQLN------SLF 293
Query: 300 LSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLT 354
L+ N+L E +G + L L+ N ++ P L+ L+ + + D + +
Sbjct: 294 LNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 1e-46
Identities = 74/280 (26%), Positives = 120/280 (42%), Gaps = 37/280 (13%)
Query: 687 IGDGGFGTVYKAALPDGKT-VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYC 744
IG G FG V+ L T VAVK + + +F E L + H N+V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHII 804
+ + +V E + G +LR L V ++ AA G+ +L + I
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRV---KTLLQMVGDAAAGMEYLE---SKCCI 235
Query: 805 HRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGR 859
HRD+ A N L+ E+ K++DFG++R + S G +P PE GR
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS----GGLRQVPVKWTAPEALNYGR 291
Query: 860 STTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918
++ DV+SFG++L E + G P P + + + ++KG L L
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPY-PNLSNQQ-------TREFVEKGG---RLPCPELC 340
Query: 919 ADS-KPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957
D+ +M + C + P RP+ + + L+ I+
Sbjct: 341 PDAVFRLMEQ-------CWAYEPGQRPSFSTIYQELQSIR 373
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 166 bits (421), Expect = 6e-44
Identities = 69/277 (24%), Positives = 119/277 (42%), Gaps = 25/277 (9%)
Query: 685 NIIGDGGFGTVYKAALPDGKT-VAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGY 743
+ +G G +G VY+ VAVK L + + EF E + ++KH NLV LLG
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 744 CSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHI 803
C+ + ++ E+M G+L +LR + +A + + +L +
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQ--EVSAVVLLYMATQISSAMEYLEK---KNF 339
Query: 804 IHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTR 863
IHR++ A N L+ E KVADFGL+RL++ + PE + + +
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 399
Query: 864 GDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSK 922
DV++FGV+L E+ T G P P + V++ ++K ++
Sbjct: 400 SDVWAFGVLLWEIATYGMSPY-PGIDLSQ-------VYELLEKD---YRMERPEGC---- 444
Query: 923 PMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
P + L C NP+ RP+ + + + + E
Sbjct: 445 PEKVYELMR--ACWQWNPSDRPSFAEIHQAFETMFQE 479
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 1e-43
Identities = 58/359 (16%), Positives = 105/359 (29%), Gaps = 55/359 (15%)
Query: 199 GHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQ 258
G + S L + L D + + A+
Sbjct: 2 GSSHHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHS----AWRQANSNN 57
Query: 259 LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVV 318
Q + L + A P +L L P++
Sbjct: 58 PQIETRTGRAL----KATADL-LEDATQPGRV------ALELRSVPLPQ-FPDQAFRLSH 105
Query: 319 VVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYL-GNNQL 377
+ + ++ L ++P ++ + L TL L+RN L +P+ +L+ L + +L
Sbjct: 106 LQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRA-LPASIASLNRLRELSIRACPEL 163
Query: 378 T--------GSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQL 429
T L L L L + +P S NL+ L L + + L L
Sbjct: 164 TELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-AL 221
Query: 430 PSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYL 489
++ ++ L L L+ L P G + L
Sbjct: 222 GPAIHHLPKLEELDLRGC------------------------TAL--RNYPPIFGGRAPL 255
Query: 490 TNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLE 548
L L + +P D+ L QLE LD+ ++P + L + + +
Sbjct: 256 KRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 7e-42
Identities = 60/371 (16%), Positives = 102/371 (27%), Gaps = 59/371 (15%)
Query: 175 GSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCIS 234
GS + +++ E L + + D N + + +
Sbjct: 2 GSSHHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHS----AWRQANSNN 57
Query: 235 LTTLDLGNNNLSGLIPEKIADLAQ--LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFI 292
L + + D Q L L L P F + L
Sbjct: 58 PQIETRTGRALKAT-ADLLEDATQPGRVALELRSVPLP----QFPDQAF---RLSHLQ-- 107
Query: 293 QHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQ 352
+ L +P+ + + L L N L +P S++ L L L +
Sbjct: 108 ----HMTIDAAGLME-LPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACP 161
Query: 353 LTGPIPSEFGDSI---------KLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSG 403
+P + LQ L L + S+P S+ +L L L + + LS
Sbjct: 162 ELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS- 219
Query: 404 KVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAW 463
+ + +L +L LDL P L L L+
Sbjct: 220 ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDC---------------- 263
Query: 464 KIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRL 523
+NL LP + L+ L LDL +P + L + V +
Sbjct: 264 --------SNLLT--LPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313
Query: 524 CGQIPETMCSL 534
+
Sbjct: 314 AQLDQHRPVAR 324
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 153 bits (390), Expect = 3e-41
Identities = 63/348 (18%), Positives = 108/348 (31%), Gaps = 42/348 (12%)
Query: 113 CSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANN 171
S L + + LS+ D + + NS +
Sbjct: 11 SSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQA----NSNNPQIETRTGR 66
Query: 172 LLEGSLPYEVGNAA--ALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYEL 229
L+ + + +A L L + L P + LS L + +++ +P +
Sbjct: 67 ALK-ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTM 123
Query: 230 GDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDL 289
L TL L N L L P IA L +L+ L + +P
Sbjct: 124 QQFAGLETLTLARNPLRAL-PASIASLNRLRELSIRACPELTELPE-------------- 168
Query: 290 SFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLS 349
S E V + L L + +P S++ L NL +L +
Sbjct: 169 -------------PLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIR 214
Query: 350 RNQLTGPIPSEFGDSIKLQGLYL-GNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTS 408
+ L+ + KL+ L L G L + P G L +L L +P
Sbjct: 215 NSPLSA-LGPAIHHLPKLEELDLRGCTALR-NYPPIFGGRAPLKRLILKDCSNLLTLPLD 272
Query: 409 FGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDEL 456
L +L LDL +LPS ++ + + + + +
Sbjct: 273 IHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHR 320
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 3e-37
Identities = 57/296 (19%), Positives = 91/296 (30%), Gaps = 50/296 (16%)
Query: 289 LSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLT--NLTTL 346
LS Q H D + + + L T L
Sbjct: 32 LSQWQRHYNADRNRWHSAWRQANS-----NNPQIETRTGRALKATADLLEDATQPGRVAL 86
Query: 347 DLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVP 406
+L L P + LQ + + L +P ++ GL L L N L +P
Sbjct: 87 ELRSVPLPQ-FPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALP 143
Query: 407 TSFGNLKELTHLDLSFNELDGQLPSSLSNIL---------NLVGLYLQHNKLSGPVDELF 457
S +L L L + +LP L++ NL L L+ +
Sbjct: 144 ASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRS------ 197
Query: 458 SNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLD 517
LP S+ NL L +L + + + + P + +L +LE LD
Sbjct: 198 ---------------------LPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELD 235
Query: 518 VSRNRLCGQIPETMCSLSNLLYLSLAE-NRLEGMVPRS-GICQNLSKISLTGNKDL 571
+ P + L L L + + L +P L K+ L G +L
Sbjct: 236 LRGCTALRNYPPIFGGRAPLKRLILKDCSNLL-TLPLDIHRLTQLEKLDLRGCVNL 290
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 2e-36
Identities = 65/417 (15%), Positives = 112/417 (26%), Gaps = 135/417 (32%)
Query: 33 SLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPREL--CTSE 90
L W + + + + N + + + + L + L T
Sbjct: 27 PYHDVLSQWQRHYNADRNRWHSAWRQA----NSNNPQIETRTGRALK-ATADLLEDATQP 81
Query: 91 SLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNF 149
++L L P+ +L L + +D+
Sbjct: 82 GRVALELRSVPLP-------------------------QFPDQAFRLSHLQHMTIDAAGL 116
Query: 150 TGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLS 209
LP + A LE L L N L+ LP I +L+
Sbjct: 117 M-------------------------ELPDTMQQFAGLETLTLARNPLR-ALPASIASLN 150
Query: 210 ALSVLDLNSN---------LFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQ 260
L L + + L E ++L +L L + L P IA+L L+
Sbjct: 151 RLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSL-PASIANLQNLK 209
Query: 261 CLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVV 320
L + ++ LS + +
Sbjct: 210 SLKIRNSPLSA-------------------------------------LGPAIH------ 226
Query: 321 DLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYL-GNNQLTG 379
L L LDL P FG L+ L L + L
Sbjct: 227 ------------------HLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL- 267
Query: 380 SIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN---ELDGQLPSSL 433
++P + L L KL+L G ++P+ L + + + +LD P +
Sbjct: 268 TLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHRPVAR 324
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 3e-34
Identities = 60/357 (16%), Positives = 106/357 (29%), Gaps = 54/357 (15%)
Query: 45 ESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTG 104
E+L + + + + + S + + G L
Sbjct: 15 ENLYFQGSTALRPYHDVLSQWQRHYNADRNRW----HSAWRQANSNNPQIETRTGRALKA 70
Query: 105 TIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLM 164
T + + E ++ + L+L S P + L
Sbjct: 71 TADLL----------------------EDATQPGRVALELRSVPLP-QFPDQAFRLSHLQ 107
Query: 165 EFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSN----- 219
+ L LP + A LE L L N L+ LP I +L+ L L + +
Sbjct: 108 HMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTE 165
Query: 220 ----LFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPS 275
L E ++L +L L + L P IA+L L+ L + ++ LS +
Sbjct: 166 LPEPLASTDASGEHQGLVNLQSLRLEWTGIRSL-PASIANLQNLKSLKIRNSPLS----A 220
Query: 276 KPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDL-LLNNNMLSGKIP 334
+ + L ++ DL P G + L L + + L +P
Sbjct: 221 LGPA------IHHLPKLEE---LDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL-TLP 270
Query: 335 GSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGL 391
+ RLT L LDL +PS + + + +
Sbjct: 271 LDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHRPVARPAE 327
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 2e-30
Identities = 45/281 (16%), Positives = 92/281 (32%), Gaps = 23/281 (8%)
Query: 2 LSFNALSGSLPEELSDLPIL---TFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKI 58
+ AL + + L D L P + ++ + + + + ++
Sbjct: 63 RTGRALK-ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAG-LMEL 119
Query: 59 PPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQ 118
P + + L++++L+ N L ++P + + L E+ + + +
Sbjct: 120 PDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178
Query: 119 LVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLP 178
N L L L+ +P SI N + L N+ L +L
Sbjct: 179 HQGLVN--------------LQSLRLEWTGIRS-LPASIANLQNLKSLKIRNSPLS-ALG 222
Query: 179 YEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTL 238
+ + LE L L + P G + L L L +P ++ L L
Sbjct: 223 PAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKL 282
Query: 239 DLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSS 279
DL +P IA L +++ + + +P +
Sbjct: 283 DLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHRPVA 323
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 2e-43
Identities = 62/343 (18%), Positives = 113/343 (32%), Gaps = 54/343 (15%)
Query: 201 LPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQ 260
+ + N + + + + + ++ LDL N LS + +A +L+
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 261 CLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVV 320
L LS N L DL + DL+ N + EL +
Sbjct: 62 LLNLSSNVLY--------------ETLDLESLSTLRTLDLNNNYVQ-----ELLVGPSIE 102
Query: 321 DLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTG- 379
L NN +S ++ S + L+ N++T + G ++Q L L N++
Sbjct: 103 TLHAANNNIS-RVSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV 159
Query: 380 SIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNL 439
+ S L LNL N + V +L LDLS N+L + + +
Sbjct: 160 NFAELAASSDTLEHLNLQYNFIY-DVKGQV-VFAKLKTLDLSSNKLA-FMGPEFQSAAGV 216
Query: 440 VGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKF 499
+ L++NKL + ++L L + DL N F
Sbjct: 217 TWISLRNNKLV---------------------------LIEKALRFSQNLEHFDLRGNGF 249
Query: 500 TGEIPPDL-GNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLS 541
D +++ + + E C++ L +
Sbjct: 250 HCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYG 292
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 153 bits (390), Expect = 2e-41
Identities = 62/350 (17%), Positives = 118/350 (33%), Gaps = 37/350 (10%)
Query: 176 SLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISL 235
++ N + +T++ LK L + + LDL+ N I +L L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 236 TTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHH 295
L+L +N L + + L+ L+ L L++N + + I+
Sbjct: 61 ELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ--------------ELLVGPSIET- 103
Query: 296 GVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTG 355
+ N +S + G + L NN ++ + + LDL N++
Sbjct: 104 --LHAANNNISR-VSCSRGQGKKN--IYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT 158
Query: 356 -PIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKE 414
S L+ L L N + + L L+L+ NKL+ + F +
Sbjct: 159 VNFAELAASSDTLEHLNLQYNFIY-DVK-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAG 215
Query: 415 LTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLS-GPVDELFSNSAAWKIATMNMSNN 473
+T + L N+L + +L NL L+ N G + + FS + ++ T+
Sbjct: 216 VTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKN--QRVQTVAKQTV 272
Query: 474 LFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRL 523
G + L H + E P + + +
Sbjct: 273 KKLTGQNEEECTVPTL----GHYGAYCCEDLP---APFADRLIALGHHHH 315
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 6e-34
Identities = 68/368 (18%), Positives = 119/368 (32%), Gaps = 57/368 (15%)
Query: 58 IPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLS 117
I N + K ++++ L ++ ++ +++E+DL GN L+ + L
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 118 QLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGS 176
L + N +Y + L L L LDL++N
Sbjct: 62 LLNLSSNVLY-ETLD-LESLSTLRTLDLNNNYVQ-------------------------- 93
Query: 177 LPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLT 236
E+ ++E L NN + + + L +N + + G +
Sbjct: 94 ---ELLVGPSIETLHAANNNIS-RVSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQ 147
Query: 237 TLDLGNNNLSGL-IPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHH 295
LDL N + + E A L+ L L +N + ++
Sbjct: 148 YLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY--------------DVKGQVVFAKL 193
Query: 296 GVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLT- 354
DLS N+L+ + E S V + L NN L I +L NL DL N
Sbjct: 194 KTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHC 251
Query: 355 GPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFG-NLK 413
G + F + ++Q + + + + L G +P F L
Sbjct: 252 GTLRDFFSKNQRVQTVAKQTVK---KLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLI 308
Query: 414 ELTHLDLS 421
L H
Sbjct: 309 ALGHHHHH 316
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 5e-22
Identities = 48/271 (17%), Positives = 92/271 (33%), Gaps = 40/271 (14%)
Query: 2 LSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPE 61
LS N LS +L+ ++E L LSSN +
Sbjct: 41 LSGNPLSQISAADLAPFT-----------------------KLELLNLSSNVLYE--TLD 75
Query: 62 IGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVI 121
+ + S L+++ L+NN++ EL S+E + N ++ + +
Sbjct: 76 LESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNISRVSCSRG---QGKKNIYL 127
Query: 122 FRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGI-IPVSIWNSETLMEFSAANNLLEGSLPY 179
N I + LDL N + +S+TL + N + +
Sbjct: 128 ANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKG 186
Query: 180 EVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLD 239
+V A L+ L L++N L + E + + ++ + L +N +I L +L D
Sbjct: 187 QVVF-AKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFD 243
Query: 240 LGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270
L N + + ++ +
Sbjct: 244 LRGNGFH-CGTLRDFFSKNQRVQTVAKQTVK 273
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 7e-21
Identities = 32/192 (16%), Positives = 66/192 (34%), Gaps = 14/192 (7%)
Query: 380 SIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNL 439
+I + +T + L + + + + LDLS N L + L+ L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 440 VGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKF 499
L L N L +D + + + T++++NN + L + L N
Sbjct: 61 ELLNLSSNVLYETLD--LESLS--TLRTLDLNNNYV-----QELLVGPSIETLHAANNNI 111
Query: 500 TGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS--GIC 557
+ + G + + ++ N++ S + YL L N ++ +
Sbjct: 112 S-RVSCSRGQ--GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASS 168
Query: 558 QNLSKISLTGNK 569
L ++L N
Sbjct: 169 DTLEHLNLQYNF 180
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 2e-43
Identities = 66/405 (16%), Positives = 127/405 (31%), Gaps = 52/405 (12%)
Query: 176 SLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISL 235
++ N + +T++ LK L + + LDL+ N I +L L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 236 TTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHH 295
L+L +N L + + L+ L+ L L++N + + I+
Sbjct: 61 ELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ--------------ELLVGPSIET- 103
Query: 296 GVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTG 355
+ N +S + G ++ L NN ++ + + LDL N++
Sbjct: 104 --LHAANNNISR-VSCSRGQG--KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT 158
Query: 356 -PIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKE 414
S L+ L L N + + L L+L+ NKL+ + F +
Sbjct: 159 VNFAELAASSDTLEHLNLQYNFIY-DVK-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAG 215
Query: 415 LTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLS-GPVDELFSNSAAWKIATMNMSNN 473
+T + L N+L + +L NL L+ N G + + FS + +
Sbjct: 216 VTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKK 274
Query: 474 LFDGGLPR-----------------SLGNLSYLTNLDLHENKFT-------GEIPPDLGN 509
L L L E+ + + N
Sbjct: 275 LTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECEREN 334
Query: 510 LMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS 554
+ +D + + I + + L + L+ V
Sbjct: 335 QARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNG 379
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 155 bits (392), Expect = 3e-40
Identities = 74/469 (15%), Positives = 138/469 (29%), Gaps = 62/469 (13%)
Query: 62 IGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVI 121
N + K ++++ L ++ ++ +++E+DL GN L+ + L L +
Sbjct: 6 KQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNL 65
Query: 122 FRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180
N +Y ++ L L L LDL++N E
Sbjct: 66 SSNVLYETLD--LESLSTLRTLDLNNNYVQ-----------------------------E 94
Query: 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDL 240
+ ++E L NN + + + L +N + + G + LDL
Sbjct: 95 LLVGPSIETLHAANNNIS-RVSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDL 151
Query: 241 GNNNLSGL-IPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFD 299
N + + E A L+ L L +N + ++ D
Sbjct: 152 KLNEIDTVNFAELAASSDTLEHLNLQYNFIY--------------DVKGQVVFAKLKTLD 197
Query: 300 LSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQL-TGPIP 358
LS N+L+ + E S V + L NN L I +L NL DL N G +
Sbjct: 198 LSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLR 255
Query: 359 SEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHL 418
F + ++Q + + + + L L
Sbjct: 256 DFFSKNQRVQ--TVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRK 313
Query: 419 DLSFNELDG----QLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNL 474
+ + G +L N + + +D++ A T+
Sbjct: 314 EHALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVTLRKQA--KITLEQKKKA 371
Query: 475 FDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRL 523
D + + L E+ L+ L R
Sbjct: 372 LDEQVSNGRRAHAELDGTLQQAVG-QIELQHATEEQSPLQLLRAIVKRY 419
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 4e-38
Identities = 65/447 (14%), Positives = 129/447 (28%), Gaps = 33/447 (7%)
Query: 10 SLPEELSDLPILTF-AAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSML 68
++ E + + L +L S + ++ L LS N ++ + L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 69 KSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYG 128
+ ++LS+N L +L + +L +DL+ N + ++ L N+I
Sbjct: 61 ELLNLSSNVLYE--TLDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNISR 113
Query: 129 SIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEG-SLPYEVGNAAAL 187
+ L +N T + + + N ++ + ++ L
Sbjct: 114 VSCSRGQGKK--NIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTL 171
Query: 188 ERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSG 247
E L L N + + ++ + L LDL+SN + E +T + L NN L
Sbjct: 172 EHLNLQYNFIY-DVKGQV-VFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL 228
Query: 248 LIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSG 307
I + + L+ L N F ++ V ++ +
Sbjct: 229 -IEKALRFSQNLEHFDLRGNGFHCGTLRD-------------FFSKNQRVQTVAKQTVKK 274
Query: 308 PIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTG----PIPSEFGD 363
+ C V RL L + + G + E +
Sbjct: 275 LTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECEREN 334
Query: 364 SIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN 423
+ + + Q I + L L +V EL
Sbjct: 335 QARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAV 394
Query: 424 ELDGQLPSSLSNILNLVGLYLQHNKLS 450
+L + L L +
Sbjct: 395 G-QIELQHATEEQSPLQLLRAIVKRYE 420
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 97.2 bits (242), Expect = 3e-21
Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 14/192 (7%)
Query: 380 SIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNL 439
+I + +T + L + + + + LDLS N L + L+ L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 440 VGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKF 499
L L N L +D + + + T++++NN + L + L N
Sbjct: 61 ELLNLSSNVLYETLD--LESLS--TLRTLDLNNNYV-----QELLVGPSIETLHAANNNI 111
Query: 500 TGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS--GIC 557
+ + + + ++ N++ S + YL L N ++ +
Sbjct: 112 S-RVSC--SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASS 168
Query: 558 QNLSKISLTGNK 569
L ++L N
Sbjct: 169 DTLEHLNLQYNF 180
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 1e-42
Identities = 82/277 (29%), Positives = 123/277 (44%), Gaps = 27/277 (9%)
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
+G G FG V+ VA+K L F E + + K++H+ LV L
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHII 804
S +E +V EYM GSL +L+ TG + L + +A A G+A++ + +
Sbjct: 249 S-EEPIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVER---MNYV 302
Query: 805 HRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRG 864
HRD++A+NIL+ E KVADFGLARLI E + PE GR T +
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 865 DVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD-PTVLTADSK 922
DV+SFG++L EL T G+ P P + E V ++++G + P
Sbjct: 363 DVWSFGILLTELTTKGRVPY-PGMVNRE-------VLDQVERGY---RMPCPPECPESLH 411
Query: 923 PMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
+M C P RPT ++ FL++
Sbjct: 412 DLMC-------QCWRKEPEERPTFEYLQAFLEDYFTS 441
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 1e-42
Identities = 72/293 (24%), Positives = 120/293 (40%), Gaps = 58/293 (19%)
Query: 685 NIIGDGGFGTVYKAAL-PDGK----TVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLV 738
++G G FGTVYK P+G+ VA+K+L +A + E E + V + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 739 PLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEV---LGWDKRYKIACGAARGLAFL 795
LLG C L+ + M G L ++R ++ L W A+G+ +L
Sbjct: 81 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 796 -HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP--- 851
+HRD+ A N+L+ K+ DFGLA+L+ A E + G +P
Sbjct: 134 EDRRL----VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG----GKVPIKW 185
Query: 852 --PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP----TGPE-FKDIEGGNLVGWVFQKM 903
E T + DV+S+GV + EL+T G +P E +E G +++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-------ERL 238
Query: 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+ P + T D +M K C + RP ++ ++
Sbjct: 239 PQ--------PPICTIDVYMIMRK-------CWMIDADSRPKFRELIIEFSKM 276
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 159 bits (403), Expect = 2e-42
Identities = 71/395 (17%), Positives = 133/395 (33%), Gaps = 43/395 (10%)
Query: 201 LPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQ 260
+ + + ++ D +E + + N+ + L + Q++
Sbjct: 13 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVE 72
Query: 261 CLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHG--VFDLSYNRLSGPIPEELGSCVV 318
L L+ + + +F H + +N + P + +
Sbjct: 73 LLNLNDLQIE--------------EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPL 118
Query: 319 VVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSE-FGDSIKLQGLYLGNNQL 377
+ L+L N LS G LTTL +S N L I + F + LQ L L +N+L
Sbjct: 119 LTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER-IEDDTFQATTSLQNLQLSSNRL 177
Query: 378 TGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL 437
T + L + L N++ N L ++ + LD S N ++ + ++
Sbjct: 178 T-HVD--LSLIPSLFHANVSYNLL-----STLAIPIAVEELDASHNSIN-VVRGPVNV-- 226
Query: 438 NLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHEN 497
L L LQHN L+ N + +++S N + + + L L + N
Sbjct: 227 ELTILKLQHNNLTDT--AWLLNYP--GLVEVDLSYNELEKIMYHPFVKMQRLERLYISNN 282
Query: 498 KFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGIC 557
+ + + L+ LD+S N L + L L L N + +
Sbjct: 283 RLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKL--STH 338
Query: 558 QNLSKISLTGNKDLCGKIIGSNCQVKTFGKLALLH 592
L ++L+ N N F +A
Sbjct: 339 HTLKNLTLSHND------WDCNSLRALFRNVARPA 367
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 3e-38
Identities = 80/406 (19%), Positives = 150/406 (36%), Gaps = 37/406 (9%)
Query: 33 SLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTS-ES 91
+ S L + + E + K ++ N+ + +P L S
Sbjct: 12 CIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQ 70
Query: 92 LEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFT 150
+E ++L+ + F + +L + N I P +P L VL L+ N+ +
Sbjct: 71 VELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS 130
Query: 151 GIIPVSIWNSETLMEFSAANNLLEGSLPYEV-GNAAALERLVLTNNMLKGHLPKEIGNLS 209
+ N+ L S +NN LE + + +L+ L L++N L H+ + +
Sbjct: 131 SLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLT-HVD--LSLIP 186
Query: 210 ALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNL 269
+L +++ NL L I++ LD +N+++ + +L L L HNNL
Sbjct: 187 SLFHANVSYNLLS-----TLAIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNL 238
Query: 270 SGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNML 329
+ N P L + DLSYN L + + L ++NN L
Sbjct: 239 T-DTAW-----L--LNYPGLVEV------DLSYNELEKIMYHPFVKMQRLERLYISNNRL 284
Query: 330 SGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLG 389
+ + L LDLS N L + +L+ LYL +N + ++ L +
Sbjct: 285 V-ALNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIV-TLK--LSTHH 339
Query: 390 GLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSN 435
L L L+ N + + + + + ++ L +
Sbjct: 340 TLKNLTLSHNDWDCNSLRAL--FRNVARPAVDDADQHCKIDYQLEH 383
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 9e-17
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 6/191 (3%)
Query: 380 SIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNL 439
I +L +++ L + + + + L + +
Sbjct: 12 CIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQV 71
Query: 440 VGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKF 499
L L ++ F+ + I + M N P N+ LT L L N
Sbjct: 72 ELLNLNDLQIEEIDTYAFAYAH--TIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL 129
Query: 500 TGEIPPDL-GNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQ 558
+ +P + N +L L +S N L +T + ++L L L+ NRL V S I
Sbjct: 130 S-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVDLSLI-P 186
Query: 559 NLSKISLTGNK 569
+L +++ N
Sbjct: 187 SLFHANVSYNL 197
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 5e-05
Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 12/103 (11%)
Query: 2 LSFNALSGSLPEE----LSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGK 57
LS+N L + + L L + N+L +L + ++ L LS N +
Sbjct: 255 LSYNELE-KIMYHPFVKMQRLERLYISN--NRLV-ALNLYGQPIPTLKVLDLSHNH-LLH 309
Query: 58 IPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGN 100
+ L+++ L +N + ++ +L+ + L N
Sbjct: 310 VERNQPQFDRLENLYLDHNSIV-TLKLSTHH--TLKNLTLSHN 349
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 3e-42
Identities = 72/297 (24%), Positives = 121/297 (40%), Gaps = 49/297 (16%)
Query: 685 NIIGDGGFGTVYKA---ALPDGKT--VAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVP 739
+ +G G FG+V L D VAVK+L + R+F E++ L + +V
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 740 LLGYCSFDEEK--LLVYEYMVNGSLDLWLRNRTGSLEV---LGWDKRYKIACGAARGLAF 794
G + LV EY+ +G L +L+ L+ L + + +G+ +
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY------SSQICKGMEY 142
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDI--AGTFGYIP- 851
L + +HRD+ A NIL+ E K+ADFGLA+L+ + D G P
Sbjct: 143 LG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLL-----PLDKDYYVVREPGQSPI 194
Query: 852 ----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIE------GGNLVGWVF 900
PE + + DV+SFGV+L EL T + P + + + +
Sbjct: 195 FWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLL 254
Query: 901 QKMKKGQAADVLD-PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+ +++GQ L P A+ +M C + +P RP+ + L +
Sbjct: 255 ELLEEGQ---RLPAPPACPAEVHELMK-------LCWAPSPQDRPSFSALGPQLDML 301
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 9e-42
Identities = 82/277 (29%), Positives = 123/277 (44%), Gaps = 27/277 (9%)
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
+G G FG V+ VA+K L F E + + K++H+ LV L
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHII 804
S +E +V EYM GSL +L+ TG + L + +A A G+A++ + +
Sbjct: 332 S-EEPIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERM---NYV 385
Query: 805 HRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRG 864
HRD++A+NIL+ E KVADFGLARLI E + PE GR T +
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 445
Query: 865 DVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD-PTVLTADSK 922
DV+SFG++L EL T G+ P P + E V ++++G + P
Sbjct: 446 DVWSFGILLTELTTKGRVPY-PGMVNRE-------VLDQVERGY---RMPCPPECPESLH 494
Query: 923 PMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
+M C P RPT ++ FL++
Sbjct: 495 DLMC-------QCWRKEPEERPTFEYLQAFLEDYFTS 524
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 153 bits (389), Expect = 1e-41
Identities = 65/296 (21%), Positives = 118/296 (39%), Gaps = 46/296 (15%)
Query: 685 NIIGDGGFGTVYKAALP-----DGKTVAVKKL-SQAKTQGHREFTAEMETLGKVKHQNLV 738
+G+G FG V G+ VAVK L ++ + E+E L + H+N+V
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 739 PLLGYCSFDEEK--LLVYEYMVNGSLDLWLRNRTGSLEV---LGWDKRYKIACGAARGLA 793
G C+ D L+ E++ +GSL +L + + L + A +G+
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY------AVQICKGMD 140
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-- 851
+L + +HRD+ A N+L+ E + K+ DFGL + I + + + P
Sbjct: 141 YLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYT---VKDDRDSPVF 194
Query: 852 ---PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGW------VFQ 901
PE + DV+SFGV L EL+T + P ++ +
Sbjct: 195 WYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254
Query: 902 KMKKGQAADVLD-PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+K+G+ L P + +M C P+ R + ++++ + +
Sbjct: 255 TLKEGK---RLPCPPNCPDEVYQLMR-------KCWEFQPSNRTSFQNLIEGFEAL 300
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 153 bits (389), Expect = 2e-41
Identities = 82/293 (27%), Positives = 121/293 (41%), Gaps = 55/293 (18%)
Query: 685 NIIGDGGFGTVYKAALPDGK----TVAVKKL-SQAKTQGHREFTAEMETLGKVKHQNLVP 739
+IG G FG VY L D AVK L +F E + H N++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 740 LLGYCSFDEEKLL-VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG 798
LLG C E L V YM +G L ++RN T + V A+G+ +L
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---DLIGFGLQVAKGMKYLA-- 145
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PE 853
+ +HRD+ A N +L+E+F KVADFGLAR + E + + G +P E
Sbjct: 146 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG--AKLPVKWMALE 202
Query: 854 YGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912
Q+ + TT+ DV+SFGV+L EL+T G P P+ + + + +G+ L
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD-------ITVYLLQGR---RL 251
Query: 913 DPTVLTADSKPM---------MLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+P ML C MRP+ ++ + I
Sbjct: 252 L--------QPEYCPDPLYEVML-------KCWHPKAEMRPSFSELVSRISAI 289
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 2e-41
Identities = 83/283 (29%), Positives = 130/283 (45%), Gaps = 43/283 (15%)
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
IG G FG V G VAVK + T + F AE + +++H NLV LLG
Sbjct: 199 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 745 SFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHI 803
++ L +V EYM GSL +LR+R VLG D K + + +L +
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEG---NNF 310
Query: 804 IHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSG 858
+HRD+ A N+L++E+ AKV+DFGL + S+ G +P PE +
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDT--GKLPVKWTAPEALREK 361
Query: 859 RSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD-PTV 916
+ +T+ DV+SFG++L E+ + G+ P P + V +++KG +D P
Sbjct: 362 KFSTKSDVWSFGILLWEIYSFGRVPY-PRIPLKD-------VVPRVEKGY---KMDAPDG 410
Query: 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
+M +C + A RPT L + + L+ I+
Sbjct: 411 CPPAVYDVMK-------NCWHLDAATRPTFLQLREQLEHIRTH 446
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 2e-41
Identities = 74/296 (25%), Positives = 127/296 (42%), Gaps = 52/296 (17%)
Query: 687 IGDGGFGTVYKAALPDGK------TVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPL 740
+G+G FG V+ A + VAVK L ++F E E L ++H+++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY------------KIACGA 788
G C + ++V+EYM +G L+ +LR +L + IA
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFG 848
A G+ +L + H +HRD+ N L+ K+ DFG++R + + + + G
Sbjct: 143 ASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYR----VGGHT 195
Query: 849 YIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQK 902
+P PE + TT DV+SFGVIL E+ T GK+P + + E V +
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPW-FQLSNTE-------VIEC 247
Query: 903 MKKGQAADVLDPTVLTADSKPMM--LKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+ +G+ VL+ +P + ++ + C P R + + K L +
Sbjct: 248 ITQGR---VLE--------RPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHAL 292
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 153 bits (389), Expect = 3e-41
Identities = 75/297 (25%), Positives = 128/297 (43%), Gaps = 51/297 (17%)
Query: 685 NIIGDGGFGTVYKAALPDGK------TVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLV 738
+G+G FG V+ A + VAVK L +A ++F E E L ++HQ++V
Sbjct: 47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV 106
Query: 739 PLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYK-----------IACG 787
G C+ L+V+EYM +G L+ +LR+ ++L + +A
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF 847
A G+ +L H +HRD+ N L+ + K+ DFG++R I + + + G
Sbjct: 167 VAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR----VGGR 219
Query: 848 GYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQ 901
+P PE + TT DV+SFGV+L E+ T GK+P + + E
Sbjct: 220 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW-YQLSNTE-------AID 271
Query: 902 KMKKGQAADVLDPTVLTADSKPM--MLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+ +G+ L+ +P ++ I C P R ++ V L+ +
Sbjct: 272 CITQGR---ELE--------RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 3e-41
Identities = 76/293 (25%), Positives = 120/293 (40%), Gaps = 42/293 (14%)
Query: 685 NIIGDGGFGTVYKAAL-----PDGKTVAVKKL-SQAKTQGHREFTAEMETLGKVKHQNLV 738
+G+G FG V G+ VAVK L + A Q + E++ L + H++++
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 739 PLLGYCSFDEEK--LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
G C LV EY+ GSL +L + L L A G+A+LH
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLH 151
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP----- 851
H IHRD+ A N+LL+ + K+ DFGLA+ + + G P
Sbjct: 152 ---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR---VREDGDSPVFWYA 205
Query: 852 PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGW------VFQKMK 904
PE + + DV+SFGV L EL+T P K +E + + + ++
Sbjct: 206 PECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265
Query: 905 KGQAADVLD-PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+G+ L P A+ +M C + RPT +++ LK +
Sbjct: 266 RGE---RLPRPDKCPAEVYHLMKN-------CWETEASFRPTFENLIPILKTV 308
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 6e-41
Identities = 71/296 (23%), Positives = 119/296 (40%), Gaps = 46/296 (15%)
Query: 685 NIIGDGGFGTVYKA---ALPDGKT--VAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVP 739
+G G FG+V L D VAVKKL + + R+F E+E L ++H N+V
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 740 LLGYCSFDEEK--LLVYEYMVNGSLDLWLRNRTGSLEV---LGWDKRYKIACGAARGLAF 794
G C + L+ EY+ GSL +L+ ++ L + +G+ +
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY------TSQICKGMEY 160
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP--- 851
L T IHRD+ NIL+ E K+ DFGL +++ + + G P
Sbjct: 161 LG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYK---VKEPGESPIFW 214
Query: 852 --PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGW-------VFQ 901
PE + + DV+SFGV+L EL T ++ P + + + +
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 274
Query: 902 KMKKGQAADVLD-PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+K L P + +M + C ++N RP+ + + +I
Sbjct: 275 LLKNNG---RLPRPDGCPDEIYMIMTE-------CWNNNVNQRPSFRDLALRVDQI 320
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 156 bits (395), Expect = 7e-41
Identities = 76/282 (26%), Positives = 120/282 (42%), Gaps = 37/282 (13%)
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
+G G FG V+ A VAVK + F AE + ++H LV L
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVV 252
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHII 804
+ E ++ E+M GSL +L++ G K + A G+AF+ + I
Sbjct: 253 T-KEPIYIITEFMAKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIEQ---RNYI 306
Query: 805 HRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGR 859
HRD++A+NIL++ K+ADFGLAR+I E P PE G
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG-----AKFPIKWTAPEAINFGS 361
Query: 860 STTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD-PTVL 917
T + DV+SFG++L+E+VT G+ P P + E V + +++G + P
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGRIPY-PGMSNPE-------VIRALERG---YRMPRPENC 410
Query: 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
+ +M+ C + P RPT ++ L +
Sbjct: 411 PEELYNIMM-------RCWKNRPEERPTFEYIQSVLDDFYTA 445
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 8e-41
Identities = 74/290 (25%), Positives = 120/290 (41%), Gaps = 55/290 (18%)
Query: 686 IIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS 745
+G G FG V VAVK + + EF E +T+ K+ H LV G CS
Sbjct: 15 ELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 746 FDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHGFTPHII 804
+ +V EY+ NG L +LR+ LE + ++ G+AFL H F I
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEP---SQLLEMCYDVCEGMAFLESHQF----I 126
Query: 805 HRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGR 859
HRD+ A N L++ + KV+DFG+ R + + S P PE +
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG-----TKFPVKWSAPEVFHYFK 181
Query: 860 STTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918
+++ DV++FG+++ E+ + GK P + + E V K+ +G L
Sbjct: 182 YSSKSDVWAFGILMWEVFSLGKMPY-DLYTNSE-------VVLKVSQGH---RLY----- 225
Query: 919 ADSKPM---------MLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
+P M C + P RPT +L ++ ++ +
Sbjct: 226 ---RPHLASDTIYQIMY-------SCWHELPEKRPTFQQLLSSIEPLREK 265
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 1e-40
Identities = 83/285 (29%), Positives = 130/285 (45%), Gaps = 47/285 (16%)
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
IG G FG V G VAVK + T + F AE + +++H NLV LLG
Sbjct: 27 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 745 SFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHGFTPH 802
++ L +V EYM GSL +LR+R VLG D K + + +L + F
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGNNF--- 138
Query: 803 IIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQS 857
+HRD+ A N+L++E+ AKV+DFGL + G +P PE +
Sbjct: 139 -VHRDLAARNVLVSEDNVAKVSDFGLTKEA---------SSTQDTGKLPVKWTAPEALRE 188
Query: 858 GRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916
+ +T+ DV+SFG++L E+ + G+ P P + V +++KG +D
Sbjct: 189 KKFSTKSDVWSFGILLWEIYSFGRVPY-PRIPLKD-------VVPRVEKGY---KMD--- 234
Query: 917 LTADSKPMM--LKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
P + + +C + AMRP+ L + + L+ IK
Sbjct: 235 -----APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 1e-40
Identities = 71/296 (23%), Positives = 118/296 (39%), Gaps = 46/296 (15%)
Query: 685 NIIGDGGFGTVYKA---ALPDGKT--VAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVP 739
+G G FG+V L D VAVKKL + + R+F E+E L ++H N+V
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 740 LLGYCSFDEEK--LLVYEYMVNGSLDLWLRNRTGSLEV---LGWDKRYKIACGAARGLAF 794
G C + L+ EY+ GSL +L+ ++ L + +G+ +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY------TSQICKGMEY 129
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP--- 851
L T IHRD+ NIL+ E K+ DFGL +++ + G P
Sbjct: 130 LG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK---VKEPGESPIFW 183
Query: 852 --PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGW-------VFQ 901
PE + + DV+SFGV+L EL T ++ P + + + +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 243
Query: 902 KMKKGQAADVLD-PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+K L P + +M + C ++N RP+ + + +I
Sbjct: 244 LLKNNG---RLPRPDGCPDEIYMIMTE-------CWNNNVNQRPSFRDLALRVDQI 289
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 1e-40
Identities = 65/288 (22%), Positives = 112/288 (38%), Gaps = 55/288 (19%)
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
+G G FG V VA+K + + EF E + + + H+ LV L G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHGFTPHI 803
+ ++ EYM NG L +LR + + ++ + +L F
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESKQF---- 141
Query: 804 IHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSG 858
+HRD+ A N L+N++ KV+DFGL+R + E S P PE
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG-----SKFPVRWSPPEVLMYS 196
Query: 859 RSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917
+ +++ D+++FGV++ E+ + GK P F + E + + +G L
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMPY-ERFTNSE-------TAEHIAQGL---RLY---- 241
Query: 918 TADSKPM---------MLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+P M C + RPT +L + ++
Sbjct: 242 ----RPHLASEKVYTIMY-------SCWHEKADERPTFKILLSNILDV 278
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 2e-40
Identities = 83/293 (28%), Positives = 119/293 (40%), Gaps = 55/293 (18%)
Query: 685 NIIGDGGFGTVYKAALPDGK----TVAVKKL-SQAKTQGHREFTAEMETLGKVKHQNLVP 739
+IG G FG VY L D AVK L +F E + H N++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 740 LLGYCSFDEEKLL-VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG 798
LLG C E L V YM +G L ++RN T + V A+G+ FL
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---DLIGFGLQVAKGMKFLA-- 209
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PE 853
+ +HRD+ A N +L+E+F KVADFGLAR + E T +P E
Sbjct: 210 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH--NKTGAKLPVKWMALE 266
Query: 854 YGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912
Q+ + TT+ DV+SFGV+L EL+T G P P+ + + + +G+ L
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD-------ITVYLLQGR---RL 315
Query: 913 DPTVLTADSKPM---------MLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+P ML C MRP+ ++ + I
Sbjct: 316 L--------QPEYCPDPLYEVML-------KCWHPKAEMRPSFSELVSRISAI 353
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 2e-40
Identities = 72/285 (25%), Positives = 122/285 (42%), Gaps = 41/285 (14%)
Query: 685 NIIGDGGFGTVYKAALPDGKT-VAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGY 743
+ +G G +G VY+ VAVK L + + EF E + ++KH NLV LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 744 CSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHGFTPH 802
C+ + ++ E+M G+L +LR + + +A + + +L F
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKKNF--- 132
Query: 803 IIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQS 857
IHRD+ A N L+ E KVADFGL+RL++ P PE
Sbjct: 133 -IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-----AKFPIKWTAPESLAY 186
Query: 858 GRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916
+ + + DV++FGV+L E+ T G P P + V++ ++K ++
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY-PGIDLSQ-------VYELLEKDY---RME--- 232
Query: 917 LTADSKPMM--LKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959
+P K+ + C NP+ RP+ + + + + E
Sbjct: 233 -----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 2e-40
Identities = 76/281 (27%), Positives = 115/281 (40%), Gaps = 41/281 (14%)
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
IG G FG V+ + VA+K + + +F E E + K+ H LV L G C
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHGFTPHI 803
LV E+M +G L +LR + G + + G+A+L
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEACV---- 125
Query: 804 IHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSG 858
IHRD+ A N L+ E KV+DFG+ R + + ST P PE
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG-----TKFPVKWASPEVFSFS 180
Query: 859 RSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917
R +++ DV+SFGV++ E+ + GK P + E V + + G L
Sbjct: 181 RYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSE-------VVEDISTGF---RLY---- 225
Query: 918 TADSKPMM--LKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
KP + + +I C + P RP +L+ L EI
Sbjct: 226 ----KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 149 bits (379), Expect = 2e-40
Identities = 84/288 (29%), Positives = 125/288 (43%), Gaps = 55/288 (19%)
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
+G G FG V+ VAVK L Q F AE + +++HQ LV L
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHGFTPHI 803
+ E ++ EYM NGSL +L+ +G L +K +A A G+AF+ +
Sbjct: 78 T-QEPIYIITEYMENGSLVDFLKTPSGI--KLTINKLLDMAAQIAEGMAFIEERNY---- 130
Query: 804 IHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSG 858
IHRD++A+NIL+++ K+ADFGLARLI E P PE G
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-----AKFPIKWTAPEAINYG 185
Query: 859 RSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917
T + DV+SFG++L E+VT G+ P P + E V Q +++G +
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPE-------VIQNLERGY---RMV---- 230
Query: 918 TADSKPM---------MLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+P M C + P RPT ++ L++
Sbjct: 231 ----RPDNCPEELYQLMR-------LCWKERPEDRPTFDYLRSVLEDF 267
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 3e-40
Identities = 78/289 (26%), Positives = 127/289 (43%), Gaps = 50/289 (17%)
Query: 685 NIIGDGGFGTVYKAAL-PDGK----TVAVKKL-SQAKTQGHREFTAEMETLGKVKHQNLV 738
++G G FGTV+K P+G+ V +K + ++ Q + T M +G + H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 739 PLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEV---LGWDKRYKIACGAARGLAFL 795
LLG C LV +Y+ GSL +R G+L L W A+G+ +L
Sbjct: 79 RLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGMYYL 131
Query: 796 H-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP--- 851
HG +HR++ A N+LL + +VADFG+A L+ + + P
Sbjct: 132 EEHGM----VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE----AKTPIKW 183
Query: 852 --PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908
E G+ T + DV+S+GV + EL+T G EP + + V ++KG+
Sbjct: 184 MALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP----YAGLRLAE----VPDLLEKGE- 234
Query: 909 ADVLD-PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
L P + T D +M+K C + +RPT + +
Sbjct: 235 --RLAQPQICTIDVYMVMVK-------CWMIDENIRPTFKELANEFTRM 274
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 4e-40
Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 22/210 (10%)
Query: 685 NIIGDGGFGTVYKAAL--PDGKT--VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVP 739
IIG G G V L P + VA+K L T+ R +F +E +G+ H N++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHG 798
L G + ++V EYM NGSLD +LR G ++ + + G G+ +L G
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM---QLVGMLRGVGAGMRYLSDLG 171
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PE 853
+ +HRD+ A N+L++ KV+DFGL+R++ E T G IP PE
Sbjct: 172 Y----VHRDLAARNVLVDSNLVCKVSDFGLSRVL---EDDPDAAYTTTGGKIPIRWTAPE 224
Query: 854 YGQSGRSTTRGDVYSFGVILLELVT-GKEP 882
++ DV+SFGV++ E++ G+ P
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 5e-40
Identities = 75/295 (25%), Positives = 124/295 (42%), Gaps = 50/295 (16%)
Query: 679 NNFCKTNIIGDGGFGTVYKAAL-PDGK----TVAVKKLSQAKTQGHR-EFTAEMETLGKV 732
F K ++G G FGTVYK P+G+ VA+K+L +A + E E + V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 733 KHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEV---LGWDKRYKIACGAA 789
+ ++ LLG C L+ + M G L ++R ++ L W A
Sbjct: 75 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 790 RGLAFL-HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFG 848
+G+ +L +HRD+ A N+L+ K+ DFGLA+L+ A E + G
Sbjct: 128 KGMNYLEDRRL----VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG----G 179
Query: 849 YIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQK 902
+P E T + DV+S+GV + EL+T G +P + I +
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP----YDGIPASE----ISSI 231
Query: 903 MKKGQAADVLD-PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
++KG+ L P + T D +M+K C + RP ++ ++
Sbjct: 232 LEKGER---LPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELIIEFSKM 276
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 6e-40
Identities = 79/291 (27%), Positives = 130/291 (44%), Gaps = 54/291 (18%)
Query: 686 IIGDGGFGTVYKAAL--PDGK---TVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVP 739
+IG G FG VYK L GK VA+K L T+ R +F E +G+ H N++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHG 798
L G S + +++ EYM NG+LD +LR + G VL + + G A G+ +L +
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL---QLVGMLRGIAAGMKYLANMN 167
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PE 853
+ +HRD+ A NIL+N KV+DFGL+R++ E + G IP PE
Sbjct: 168 Y----VHRDLAARNILVNSNLVCKVSDFGLSRVL---EDDPEATYTTSGGKIPIRWTAPE 220
Query: 854 YGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912
+ T+ DV+SFG+++ E++T G+ P + ++ + +
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERP-----------------YWELSNHEVMKAI 263
Query: 913 D-------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+ P + +M+ C A RP ++ L ++
Sbjct: 264 NDGFRLPTPMDCPSAIYQLMM-------QCWQQERARRPKFADIVSILDKL 307
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 8e-40
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 43/291 (14%)
Query: 685 NIIGDGGFGTVYKAALPDGK------TVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNL 737
+G G FG VY+ VA+K +++A + R EF E + + ++
Sbjct: 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR------YKIACGAARG 791
V LLG S + L++ E M G L +LR+ ++ ++A A G
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
+A+L+ +HRD+ A N ++ E+F K+ DFG+ R I + + G G +P
Sbjct: 151 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR----KGGKGLLP 203
Query: 852 -----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKK 905
PE + G TT DV+SFGV+L E+ T ++P + + V + + +
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQ-------VLRFVME 255
Query: 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
G +LD + M C NP MRP+ L ++ +KE
Sbjct: 256 GG---LLDKPDNC--PDMLFELMRM----CWQYNPKMRPSFLEIISSIKEE 297
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 9e-40
Identities = 77/285 (27%), Positives = 118/285 (41%), Gaps = 39/285 (13%)
Query: 685 NIIGDGGFGTVYKAALPDGK----TVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVP 739
+IG G FG VY D A+K LS+ F E + + H N++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 740 LLGYCSFDEE-KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG 798
L+G E ++ YM +G L ++R+ + V ARG+ +L
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVK---DLISFGLQVARGMEYLA-- 141
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PE 853
+HRD+ A N +L+E F KVADFGLAR I E + +P E
Sbjct: 142 -EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQ--HRHARLPVKWTALE 198
Query: 854 YGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912
Q+ R TT+ DV+SFGV+L EL+T G P + + + +G+ L
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLTRGAPPY-RHIDPFD-------LTHFLAQGR---RL 247
Query: 913 D-PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
P +M C +PA+RPT ++ +++I
Sbjct: 248 PQPEYCPDSLYQVMQ-------QCWEADPAVRPTFRVLVGEVEQI 285
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 146 bits (372), Expect = 2e-39
Identities = 67/301 (22%), Positives = 126/301 (41%), Gaps = 59/301 (19%)
Query: 685 NIIGDGGFGTVYKAALPDGK------TVAVKKLSQ-AKTQGHREFTAEMETLGKVKHQNL 737
+G+ FG VYK L VA+K L A+ EF E +++H N+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY------------KIA 785
V LLG + D+ +++ Y +G L +L R+ +V D +
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 786 CGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG 845
A G+ +L + H++H+D+ N+L+ ++ K++D GL R + A + +
Sbjct: 135 AQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYK----LL 187
Query: 846 TFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWV 899
+P PE G+ + D++S+GV+L E+ + G +P + + + V
Sbjct: 188 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY-CGYSNQD-------V 239
Query: 900 FQKMKKGQAADVLD-----PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954
+ ++ Q VL P + A +M+ +C ++ P+ RP + L+
Sbjct: 240 VEMIRNRQ---VLPCPDDCPAWVYA----LMI-------ECWNEFPSRRPRFKDIHSRLR 285
Query: 955 E 955
Sbjct: 286 A 286
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 149 bits (377), Expect = 3e-39
Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 22/210 (10%)
Query: 685 NIIGDGGFGTVYKAAL--PDGKT--VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVP 739
++G G FG V L P K VA+K L T+ R +F E +G+ H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHG 798
L G + + ++V EYM NGSLD +LR V+ + + G A G+ +L G
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMG 167
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PE 853
+ +HRD+ A NIL+N KV+DFGL R++ E G IP PE
Sbjct: 168 Y----VHRDLAARNILINSNLVCKVSDFGLGRVL---EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 854 YGQSGRSTTRGDVYSFGVILLELVT-GKEP 882
+ T+ DV+S+G++L E+++ G+ P
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 3e-39
Identities = 68/288 (23%), Positives = 114/288 (39%), Gaps = 52/288 (18%)
Query: 686 IIGDGGFGTVYKAAL--PDGKT--VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPL 740
IG+G FG V++ P+ VA+K + R +F E T+ + H ++V L
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHGF 799
+G + + ++ E G L +L+ R SL++ A + LA+L F
Sbjct: 82 IGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLA---SLILYAYQLSTALAYLESKRF 137
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEY 854
+HRDI A N+L++ K+ DFGL+R + + G +P PE
Sbjct: 138 ----VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY-----YKASKGKLPIKWMAPES 188
Query: 855 GQSGRSTTRGDVYSFGVILLELVT-GKEP----TGPE-FKDIEGGNLVGWVFQKMKKGQA 908
R T+ DV+ FGV + E++ G +P + IE G +++
Sbjct: 189 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-------ERLPM--- 238
Query: 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
P +M C + +P+ RP + L I
Sbjct: 239 -----PPNCPPTLYSLMT-------KCWAYDPSRRPRFTELKAQLSTI 274
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 4e-39
Identities = 75/301 (24%), Positives = 114/301 (37%), Gaps = 57/301 (18%)
Query: 679 NNFCKTNIIGDGGFGTVYKAAL--PDGKT--VAVKKL---SQAKTQGHREFTAEMETLGK 731
+ +GDG FG V + P GKT VAVK L ++ + +F E+ +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 732 VKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEV---LGWDKRYKIACGA 788
+ H+NL+ L G +V E GSL LR G + + A
Sbjct: 78 LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY------AVQV 130
Query: 789 ARGLAFL-HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF 847
A G+ +L F IHRD+ A N+LL K+ DFGL R + + H
Sbjct: 131 AEGMGYLESKRF----IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 186
Query: 848 GY--IPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMK 904
+ PE ++ + D + FGV L E+ T G+EP + +
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP-----------------WIGLN 229
Query: 905 KGQAADVLD--------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
Q +D P D +M++ C + P RPT + + FL E
Sbjct: 230 GSQILHKIDKEGERLPRPEDCPQDIYNVMVQ-------CWAHKPEDRPTFVALRDFLLEA 282
Query: 957 K 957
+
Sbjct: 283 Q 283
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 4e-39
Identities = 83/310 (26%), Positives = 125/310 (40%), Gaps = 80/310 (25%)
Query: 685 NIIGDGGFGTVYKAALPDGK---TVAVKKL-SQAKTQGHREFTAEMETLGKV-KHQNLVP 739
++IG+G FG V KA + A+K++ A HR+F E+E L K+ H N++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY------------KIACG 787
LLG C L EY +G+L +LR + A
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDI--AG 845
ARG+ +L IHRD+ A NIL+ E + AK+ADFGL+R ++
Sbjct: 151 VARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---------GQEVYVKK 198
Query: 846 TFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP----TGPEFKDIEGGNL 895
T G +P E TT DV+S+GV+L E+V+ G P T E
Sbjct: 199 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--------- 249
Query: 896 VGWVFQKMKKGQAADVLDPTVLTADSKPM---------MLKMLRIAGDCLSDNPAMRPTM 946
+++K+ +G L+ KP+ M C + P RP+
Sbjct: 250 ---LYEKLPQGY---RLE--------KPLNCDDEVYDLMR-------QCWREKPYERPSF 288
Query: 947 LHVLKFLKEI 956
+L L +
Sbjct: 289 AQILVSLNRM 298
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 145 bits (369), Expect = 5e-39
Identities = 69/286 (24%), Positives = 122/286 (42%), Gaps = 49/286 (17%)
Query: 687 IGDGGFGTVYKAAL--PDGKT-VAVKKL-SQAKTQGHREFTAEMETLGKVKHQNLVPLLG 742
+G G FG+V + + VA+K L + E E + + ++ + +V L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHGFTP 801
C E +LV E G L +L + + V ++ + G+ +L F
Sbjct: 78 VCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVS---NVAELLHQVSMGMKYLEEKNF-- 131
Query: 802 HIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQ 856
+HRD+ A N+LL AK++DFGL++ + A +++ + AG + P PE
Sbjct: 132 --VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW---PLKWYAPECIN 186
Query: 857 SGRSTTRGDVYSFGVILLELVT-GKEP----TGPE-FKDIEGGNLVGWVFQKMKKGQAAD 910
+ ++R DV+S+GV + E ++ G++P GPE IE G ++M+
Sbjct: 187 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG-------KRMEC----- 234
Query: 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
P + +M DC RP L V + ++
Sbjct: 235 ---PPECPPELYALMS-------DCWIYKWEDRPDFLTVEQRMRAC 270
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 8e-39
Identities = 68/293 (23%), Positives = 119/293 (40%), Gaps = 47/293 (16%)
Query: 685 NIIGDGGFGTVYKAALPDGK----TVAVK--KLSQAKTQGHREFTAEMETLGKVKHQNLV 738
I+G+G FG+V + L VAVK KL + + EF +E + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 739 PLLGYCSFDE-----EKLLVYEYMVNGSLDLWLRNR--TGSLEVLGWDKRYKIACGAARG 791
LLG C + +++ +M G L +L + + K A G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
+ +L + +HRD+ A N +L ++ VADFGL++ I + + + G +P
Sbjct: 160 MEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYR----QGRIAKMP 212
Query: 852 -----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKK 905
E T++ DV++FGV + E+ T G P P ++ E ++ +
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY-PGVQNHE-------MYDYLLH 264
Query: 906 GQAADVLDPTVLTADSKPMM--LKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
G L +P ++ I C +P RPT + L+++
Sbjct: 265 GH---RLK--------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 8e-39
Identities = 70/290 (24%), Positives = 116/290 (40%), Gaps = 55/290 (18%)
Query: 686 IIGDGGFGTVYKAALPDGK---TVAVKKLSQAKTQGHR--EFTAEMETLGKVKHQNLVPL 740
+G G FGTV K K TVAVK L E AE + ++ + +V +
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNR--TGSLEVLGWDKRYKIACGAARGLAFL-HH 797
+G C E +LV E G L+ +L+ ++ + G+ +L
Sbjct: 84 IGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL------VHQVSMGMKYLEES 136
Query: 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----P 852
F +HRD+ A N+LL + AK++DFGL++ + A E + G + P P
Sbjct: 137 NF----VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW---PVKWYAP 189
Query: 853 EYGQSGRSTTRGDVYSFGVILLELVT-GKEP----TGPE-FKDIEGGNLVGWVFQKMKKG 906
E + +++ DV+SFGV++ E + G++P G E +E G ++M
Sbjct: 190 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-------ERMGC- 241
Query: 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
P + +M C + + RP V L+
Sbjct: 242 -------PAGCPREMYDLMN-------LCWTYDVENRPGFAAVELRLRNY 277
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 1e-38
Identities = 68/290 (23%), Positives = 115/290 (39%), Gaps = 56/290 (19%)
Query: 686 IIGDGGFGTVYKAAL--PDGKT--VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPL 740
I+G+G FG VY+ G+ VAVK + T ++ +F +E + + H ++V L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHGF 799
+G +E ++ E G L +L SL+VL + + +A+L
Sbjct: 79 IGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLESINC 134
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEY 854
+HRDI NIL+ K+ DFGL+R I + + +P PE
Sbjct: 135 ----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY-----YKASVTRLPIKWMSPES 185
Query: 855 GQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913
R TT DV+ F V + E+++ GK+P F ++ VL+
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILSFGKQP-----------------FFWLENKDVIGVLE 228
Query: 914 -------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
P + +M C +P+ RP ++ L ++
Sbjct: 229 KGDRLPKPDLCPPVLYTLMT-------RCWDYDPSDRPRFTELVCSLSDV 271
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 2e-38
Identities = 75/291 (25%), Positives = 112/291 (38%), Gaps = 43/291 (14%)
Query: 685 NIIGDGGFGTVYKAALPDGK------TVAVKKLSQ-AKTQGHREFTAEMETLGKVKHQNL 737
+G G FG VY+ + VAVK L + Q +F E + K HQN+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNR---TGSLEVLGWDKRYKIACGAARGLAF 794
V +G + ++ E M G L +LR L +A A G +
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFE---AKVADFGLARLISACETHVSTDIAGTFGYIP 851
L H IHRDI A N LL AK+ DFG+AR I + G +P
Sbjct: 156 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK----GGCAMLP 208
Query: 852 -----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKK 905
PE G T++ D +SFGV+L E+ + G P P + E V + +
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY-PSKSNQE-------VLEFVTS 260
Query: 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
G +DP + + +++ C P RP +L+ ++
Sbjct: 261 GG---RMDP---PKNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYC 302
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 3e-38
Identities = 84/394 (21%), Positives = 149/394 (37%), Gaps = 47/394 (11%)
Query: 576 IGSNCQVKTFGKLALLHAFGLAGLVVGCVFIVLTTVIALRKQIKRRSRCSDPEEIEETKL 635
I + T +L A +A L+ G +V + I R + + KL
Sbjct: 290 IAGAPEPLTVTAPSLTIAENMADLIDGYCRLVNGATQSF---IIRPQKEGERALPSIPKL 346
Query: 636 NSFSDHNLYFLSSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTV 695
+ + + S S+ I E + IG+G FG V
Sbjct: 347 ANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDV 406
Query: 696 YKAALPDGK----TVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750
++ + VA+K + R +F E T+ + H ++V L+G + +
Sbjct: 407 HQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465
Query: 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH-HGFTPHIIHRDIK 809
++ E G L +L+ R SL++ A + LA+L F +HRDI
Sbjct: 466 WIIMELCTLGELRSFLQVRKFSLDLA---SLILYAYQLSTALAYLESKRF----VHRDIA 518
Query: 810 ASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRG 864
A N+L++ K+ DFGL+R + + ++ G +P PE R T+
Sbjct: 519 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK-----GKLPIKWMAPESINFRRFTSAS 573
Query: 865 DVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD-PTVLTADSK 922
DV+ FGV + E++ G +P F+ ++ + V +++ G+ L P
Sbjct: 574 DVWMFGVCMWEILMHGVKP----FQGVKNND----VIGRIENGE---RLPMPPNCPPTLY 622
Query: 923 PMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+M C + +P+ RP + L I
Sbjct: 623 SLMT-------KCWAYDPSRRPRFTELKAQLSTI 649
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 3e-38
Identities = 60/299 (20%), Positives = 110/299 (36%), Gaps = 68/299 (22%)
Query: 686 IIGDGGFGTVYKAAL--------PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNL 737
+G G F ++K V +K L +A F + K+ H++L
Sbjct: 15 SLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHL 74
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-H 796
V G C +E +LV E++ GSLD +L+ + +L + ++A A + FL
Sbjct: 75 VLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL---WKLEVAKQLAAAMHFLEE 131
Query: 797 HGFTPHIIHRDIKASNILLNEEFE--------AKVADFGLARLISACETHVSTDIAGTFG 848
+ IH ++ A NILL E + K++D G++ + + DI
Sbjct: 132 NTL----IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV------LPKDI----L 177
Query: 849 YIP-----PEYGQSGRS-TTRGDVYSFGVILLELVT-GKEP----TGPEFKDIEGGNLVG 897
PE ++ ++ D +SFG L E+ + G +P
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR----------- 226
Query: 898 WVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
Q + L P ++ + +C+ P RP+ +++ L +
Sbjct: 227 -KLQFYEDRH---QLP--------APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 3e-38
Identities = 84/316 (26%), Positives = 122/316 (38%), Gaps = 79/316 (25%)
Query: 685 NIIGDGGFGTVYKAALPDGK------TVAVKKL-SQAKTQGHREFTAEMETLGKVKHQNL 737
+G+G FG V KA K TVAVK L A R+ +E L +V H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNR--------------------TGSLEVLG 777
+ L G CS D LL+ EY GSL +LR L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 778 WDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837
A ++G+ +L ++HRD+ A NIL+ E + K++DFGL+R +
Sbjct: 149 MGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDV----- 200
Query: 838 HVSTDI--AGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKD 889
D + G IP E TT+ DV+SFGV+L E+VT G P P
Sbjct: 201 -YEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY-PGIPP 258
Query: 890 IEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKP---------MMLKMLRIAGDCLSDNP 940
+F +K G ++ +P +ML C P
Sbjct: 259 ER-------LFNLLKTGH---RME--------RPDNCSEEMYRLML-------QCWKQEP 293
Query: 941 AMRPTMLHVLKFLKEI 956
RP + K L+++
Sbjct: 294 DKRPVFADISKDLEKM 309
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 4e-38
Identities = 87/307 (28%), Positives = 128/307 (41%), Gaps = 66/307 (21%)
Query: 685 NIIGDGGFGTVYKAALPDGK--------TVAVKKL-SQAKTQGHREFTAEMETLGKV-KH 734
+G+G FG V A TVAVK L A + + +EME + + KH
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 735 QNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY------------ 782
+N++ LLG C+ D ++ EY G+L +LR R +D
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 783 KIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD 842
ARG+ +L + IHRD+ A N+L+ E K+ADFGLAR I+ + D
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDIN------NID 211
Query: 843 I--AGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP----TGPEFKDI 890
T G +P PE T + DV+SFGV++ E+ T G P E
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---- 267
Query: 891 EGGNLVGWVFQKMKKGQAADVLD-PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHV 949
+F+ +K+G +D P T + MM DC P+ RPT +
Sbjct: 268 --------LFKLLKEGH---RMDKPANCTNELYMMMR-------DCWHAVPSQRPTFKQL 309
Query: 950 LKFLKEI 956
++ L I
Sbjct: 310 VEDLDRI 316
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 150 bits (379), Expect = 8e-38
Identities = 86/419 (20%), Positives = 130/419 (31%), Gaps = 109/419 (26%)
Query: 139 LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLK 198
VL++ + T +P + + +N L SLP L L ++ N L
Sbjct: 42 NAVLNVGESGLT-TLPDCLPAH--ITTLVIPDNNLT-SLPALPPE---LRTLEVSGNQLT 94
Query: 199 GHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQ 258
LP L LS+ + L L + N L+ L
Sbjct: 95 -SLPVLPPGLLELSIFSNPLTHLPALPS-------GLCKLWIFGNQLTSLPVL----PPG 142
Query: 259 LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVV 318
LQ L +S N L+ +P
Sbjct: 143 LQELSVSDNQLAS-------------------------------------LPALPSE--- 162
Query: 319 VVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLT 378
+ L NN L+ +P + L L +S NQL +P+ +L L+ NN+LT
Sbjct: 163 LCKLWAYNNQLT-SLPMLP---SGLQELSVSDNQLAS-LPTLPS---ELYKLWAYNNRLT 214
Query: 379 GSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILN 438
S+P L +L ++GN+L+ +P LKEL +S N L LP S
Sbjct: 215 -SLPALPSGLK---ELIVSGNRLTS-LPVLPSELKEL---MVSGNRLT-SLPMLPSG--- 262
Query: 439 LVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENK 498
L+ L + N+L+ LP SL +LS T ++L N
Sbjct: 263 LLSLSVYRNQLTR---------------------------LPESLIHLSSETTVNLEGNP 295
Query: 499 FTGEIPPDLGNLMQLEYLDVSRNR---LCGQIPETMCSLSNLLYLSLAENRLEGMVPRS 554
+ L + R P +L L R P
Sbjct: 296 LSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPAD 354
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 2e-37
Identities = 78/323 (24%), Positives = 133/323 (41%), Gaps = 60/323 (18%)
Query: 228 ELGDCI--SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQAN 285
++ C+ L++G + L+ L P+ + A + LV+ NNL+ +P+
Sbjct: 33 KMRACLNNGNAVLNVGESGLTTL-PDCL--PAHITTLVIPDNNLTS-LPA---------L 79
Query: 286 MPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTT 345
P+L ++S N+L+ +P + + L + + L
Sbjct: 80 PPELR------TLEVSGNQLTS-LPVLPPGLLELSIFSNPLTHLP-------ALPSGLCK 125
Query: 346 LDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKV 405
L + NQLT +P LQ L + +NQL S+P L KL N+L+ +
Sbjct: 126 LWIFGNQLTS-LPVLPP---GLQELSVSDNQLA-SLP---ALPSELCKLWAYNNQLT-SL 176
Query: 406 PTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKI 465
P L+E L +S N+L LP+ S L L+ +N+L+ + L S +
Sbjct: 177 PMLPSGLQE---LSVSDNQL-ASLPTLPS---ELYKLWAYNNRLT-SLPALPSG-----L 223
Query: 466 ATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCG 525
+ +S N LP L L + N+ T +P L L V RN+L
Sbjct: 224 KELIVSGNRL-TSLPVLPSE---LKELMVSGNRLT-SLPMLPSG---LLSLSVYRNQLT- 274
Query: 526 QIPETMCSLSNLLYLSLAENRLE 548
++PE++ LS+ ++L N L
Sbjct: 275 RLPESLIHLSSETTVNLEGNPLS 297
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 6e-29
Identities = 53/231 (22%), Positives = 89/231 (38%), Gaps = 36/231 (15%)
Query: 339 RLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTG 398
L++ + LT +P + L + +N LT S+P L L ++G
Sbjct: 38 LNNGNAVLNVGESGLTT-LPDCLPAH--ITTLVIPDNNLT-SLP---ALPPELRTLEVSG 90
Query: 399 NKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFS 458
N+L+ +P L EL+ L LPS L L++ N+L+ + L
Sbjct: 91 NQLT-SLPVLPPGLLELSIFSNPLTHLP-ALPSGLCK------LWIFGNQLTS-LPVLPP 141
Query: 459 NSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDV 518
+ +++S+N LP L L + N+ T +P L+ L V
Sbjct: 142 G-----LQELSVSDNQLA-SLPALPSE---LCKLWAYNNQLT-SLPMLPSG---LQELSV 188
Query: 519 SRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNK 569
S N+L +P L L NRL +P L ++ ++GN+
Sbjct: 189 SDNQLA-SLPTLPSELYK---LWAYNNRLT-SLPAL--PSGLKELIVSGNR 232
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 2e-25
Identities = 64/285 (22%), Positives = 100/285 (35%), Gaps = 37/285 (12%)
Query: 2 LSFNALSGSLPEELSDLPILT-FAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
+S N L+ SLP L L+ F+ L L + NQ + +P
Sbjct: 88 VSGNQLT-SLPVLPPGLLELSIFSNPLTHLPALPSGL-------CKLWIFGNQ-LTSLPV 138
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
L+ +S+S+N L+ S+P L ++ N LT + S L +L
Sbjct: 139 LPPG---LQELSVSDNQLA-SLPALPS---ELCKLWAYNNQLTS----LPMLPSGLQELS 187
Query: 121 IFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180
+ N + S+P S+L L +N T + P L E + N L SLP
Sbjct: 188 VSDNQL-ASLPTLPSELY--KLWAYNNRLTSL-PALPSG---LKELIVSGNRLT-SLPVL 239
Query: 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDL 240
L+ L+++ N L LP L L + N + P L S TT++L
Sbjct: 240 PSE---LKELMVSGNRLT-SLPMLPSGLL---SLSVYRNQLTRL-PESLIHLSSETTVNL 291
Query: 241 GNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQAN 285
N LS + + ++ S P
Sbjct: 292 EGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHL 336
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 8e-38
Identities = 66/292 (22%), Positives = 115/292 (39%), Gaps = 44/292 (15%)
Query: 685 NIIGDGGFGTVYKAALPDGK----TVAVK--KLSQAKTQGHREFTAEMETLGKVKHQNLV 738
++G G FG+V +A L VAVK K + EF E + + H ++
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 739 PLLGYCSFDEEK------LLVYEYMVNGSLDLWLRNR--TGSLEVLGWDKRYKIACGAAR 790
L+G K +++ +M +G L +L + L + A
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYI 850
G+ +L + + IHRD+ A N +L E+ VADFGL+R I + + + G +
Sbjct: 149 GMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYR----QGCASKL 201
Query: 851 P-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMK 904
P E T DV++FGV + E++T G+ P ++ E ++ +
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY-AGIENAE-------IYNYLI 253
Query: 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
G L + ++ + C S +P RP+ + L+ I
Sbjct: 254 GGN---RLKQPPECME------EVYDLMYQCWSADPKQRPSFTCLRMELENI 296
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 9e-38
Identities = 105/398 (26%), Positives = 152/398 (38%), Gaps = 104/398 (26%)
Query: 608 LTTVIALRKQIK--RRSRCSDPEEIE----ETKLNSFSDHNLYFLSSSRSKEPLSINIAM 661
LT I LR+Q+ S S T+L+S +D + S
Sbjct: 20 LTKRIPLRRQVTVSAESSSSMNSNTPLVRITTRLSSTADTPMLAGVSEYELPEDP----K 75
Query: 662 FEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGK--------TVAVKKL-S 712
+E P +LTL L G+G FG V A TVAVK L
Sbjct: 76 WEFPRDKLTLGKPL------------GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 123
Query: 713 QAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTG 771
A + + +EME + + KH+N++ LLG C+ D ++ EY G+L +LR R
Sbjct: 124 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 183
Query: 772 SLEVLGWDKRY------------KIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF 819
+D ARG+ +L + IHRD+ A N+L+ E
Sbjct: 184 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENN 240
Query: 820 EAKVADFGLARLISACETHVSTDI--AGTFGYIP-----PEYGQSGRSTTRGDVYSFGVI 872
K+ADFGLAR I+ + D T G +P PE T + DV+SFGV+
Sbjct: 241 VMKIADFGLARDIN------NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 294
Query: 873 LLELVT-GKEP----TGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKP---- 923
+ E+ T G P E +F+ +K+G +D KP
Sbjct: 295 MWEIFTLGGSPYPGIPVEE------------LFKLLKEGH---RMD--------KPANCT 331
Query: 924 -----MMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
MM C P+ RPT +++ L I
Sbjct: 332 NELYMMMRD-------CWHAVPSQRPTFKQLVEDLDRI 362
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 1e-37
Identities = 75/291 (25%), Positives = 112/291 (38%), Gaps = 43/291 (14%)
Query: 685 NIIGDGGFGTVYKAALPDGK------TVAVKKLSQ-AKTQGHREFTAEMETLGKVKHQNL 737
+G G FG VY+ + VAVK L + Q +F E + K HQN+
Sbjct: 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNR---TGSLEVLGWDKRYKIACGAARGLAF 794
V +G + ++ E M G L +LR L +A A G +
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFE---AKVADFGLARLISACETHVSTDIAGTFGYIP 851
L H IHRDI A N LL AK+ DFG+AR I + G +P
Sbjct: 197 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRK----GGCAMLP 249
Query: 852 -----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKK 905
PE G T++ D +SFGV+L E+ + G P P + E V + +
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY-PSKSNQE-------VLEFVTS 301
Query: 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
G +DP + + +++ C P RP +L+ ++
Sbjct: 302 GG---RMDP---PKNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYC 343
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 1e-37
Identities = 83/360 (23%), Positives = 136/360 (37%), Gaps = 80/360 (22%)
Query: 629 EIEETKLNSFSDHNLYFLSSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKTNIIG 688
++ + S+ ++ F+ ++ +E P L L G
Sbjct: 13 QVRWKIIESYEGNSYTFIDPTQLPYNEK-----WEFPRNNLQFGKTL------------G 55
Query: 689 DGGFGTVYKAALPD------GKTVAVKKL-SQAKTQGHREFTAEMETLGKV-KHQNLVPL 740
G FG V +A VAVK L S A +E++ + + +H+N+V L
Sbjct: 56 AGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL 115
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY----------KIACGAAR 790
LG C+ L++ EY G L +LR ++ LE + A+
Sbjct: 116 LGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQ 175
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD--IAGTFG 848
G+AFL + + IHRD+ A N+LL AK+ DFGLAR I ++ I
Sbjct: 176 GMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI------MNDSNYIVKGNA 226
Query: 849 YIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP-----TGPEFKDIEGGNLVG 897
+P PE T + DV+S+G++L E+ + G P +
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK----------- 275
Query: 898 WVFQKMKKGQAADVLD-PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
++ +K G + P + +M C + P RPT + FL+E
Sbjct: 276 -FYKLVKDGY---QMAQPAFAPKNIYSIMQ-------ACWALEPTHRPTFQQICSFLQEQ 324
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 1e-37
Identities = 86/479 (17%), Positives = 168/479 (35%), Gaps = 48/479 (10%)
Query: 105 TIEGVFEKCSNLSQLVIFRN----HIYGSIPEYLSKLP---LMVLDLDSNNFTGIIPVSI 157
SNL +F + + + ++ ++ + +
Sbjct: 12 RQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALL 71
Query: 158 WNSETLMEFSAANNLLEGSLPYEV-GNAAALERLVLTNNMLKGHLPKEI-GNLSALSVLD 215
+ + + + +E + A +++L + N ++ +LP + N+ L+VL
Sbjct: 72 DSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLV 129
Query: 216 LNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPS 275
L N + + LTTL + NNNL + + LQ L LS N L
Sbjct: 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL------ 183
Query: 276 KPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPG 335
++ + +P L ++SYN LS L + V +L ++N ++ + G
Sbjct: 184 ---THVDLSLIPSLFHA------NVSYNLLS-----TLAIPIAVEELDASHNSIN-VVRG 228
Query: 336 SLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLN 395
+ LT L L N LT + + L + L N+L + + L +L
Sbjct: 229 PV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLY 284
Query: 396 LTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDE 455
++ N+L + + L LDLS N L + + L LYL HN +
Sbjct: 285 ISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLS 342
Query: 456 LFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEY 515
+ + +S+N +D R+L + + + +I L + + +
Sbjct: 343 THHT-----LKNLTLSHNDWDCNSLRAL--FRNVARPAVDDADQHCKIDYQLEHGLCCKE 395
Query: 516 LD---VSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDL 571
D + R + + + A + + + S + L GN+ L
Sbjct: 396 SDKPYLDRLLQYIALTSVVEKVQRAQGRCSATDTINSVQSLSHYITQQGGVPLQGNEQL 454
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 147 bits (372), Expect = 4e-37
Identities = 95/495 (19%), Positives = 179/495 (36%), Gaps = 45/495 (9%)
Query: 33 SLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTS-ES 91
+ S L + + E + K ++ N+ + +P L S
Sbjct: 18 CIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQ 76
Query: 92 LEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFT 150
+E ++L+ + F + +L + N I P +P L VL L+ N+ +
Sbjct: 77 VELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS 136
Query: 151 GIIPVSIWNSETLMEFSAANNLLEGSLPYEV-GNAAALERLVLTNNMLKGHLPKEIGNLS 209
+ N+ L S +NN LE + + +L+ L L++N L H+ + +
Sbjct: 137 SLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLT-HVD--LSLIP 192
Query: 210 ALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNL 269
+L +++ NL L I++ LD +N+++ + +L L L HNNL
Sbjct: 193 SLFHANVSYNLLS-----TLAIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNL 244
Query: 270 SGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNML 329
+ N P L + DLSYN L + + L ++NN L
Sbjct: 245 T-DTAW-----L--LNYPGLVEV------DLSYNELEKIMYHPFVKMQRLERLYISNNRL 290
Query: 330 SGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLG 389
+ + L LDLS N L + +L+ LYL +N + ++ L +
Sbjct: 291 V-ALNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIV-TLK--LSTHH 345
Query: 390 GLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-------NLVGL 442
L L L+ N + + + + + ++ L + L +
Sbjct: 346 TLKNLTLSHNDWDCNSLRAL--FRNVARPAVDDADQHCKIDYQLEHGLCCKESDKPYLDR 403
Query: 443 YLQHNKLSGPVDEL-FSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTG 501
LQ+ L+ V+++ + T+N +L + L L+ N+
Sbjct: 404 LLQYIALTSVVEKVQRAQGRCSATDTINSVQSLSHYITQQGGVPLQGNEQLEAEVNELRA 463
Query: 502 EIPPDLGNLMQLEYL 516
E+ +Q E L
Sbjct: 464 EVQQLTNEQIQQEQL 478
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 51.5 bits (123), Expect = 1e-06
Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 8/126 (6%)
Query: 2 LSFNALSGSLPEELSDLPILTF-AAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
L N L+ L + P L N+L + ++E L +S+N+ + +
Sbjct: 239 LQHNNLT-DTAW-LLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNR-LVALNL 295
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
LK + LS+N L + R + LE + LD N + T++ L L
Sbjct: 296 YGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLK--LSTHHTLKNLT 351
Query: 121 IFRNHI 126
+ N
Sbjct: 352 LSHNDW 357
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 4e-37
Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 49/286 (17%)
Query: 687 IGDGGFGTVYKAALPDGK---TVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLG 742
+G G FG+V + K VA+K L Q + E E + + ++ + +V L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL-HHGFTP 801
C E +LV E G L +L + + V ++ + G+ +L F
Sbjct: 404 VCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVS---NVAELLHQVSMGMKYLEEKNF-- 457
Query: 802 HIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQ 856
+HR++ A N+LL AK++DFGL++ + A +++ + AG + P PE
Sbjct: 458 --VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW---PLKWYAPECIN 512
Query: 857 SGRSTTRGDVYSFGVILLELVT-GKEP----TGPE-FKDIEGGNLVGWVFQKMKKGQAAD 910
+ ++R DV+S+GV + E ++ G++P GPE IE G ++M+
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG-------KRMEC----- 560
Query: 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
P + +M DC RP L V + ++
Sbjct: 561 ---PPECPPELYALMS-------DCWIYKWEDRPDFLTVEQRMRAC 596
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 6e-37
Identities = 81/316 (25%), Positives = 121/316 (38%), Gaps = 79/316 (25%)
Query: 685 NIIGDGGFGTVYKAALPDGK------TVAVKKL-SQAKTQGHREFTAEMETLGKVKHQNL 737
IG+G FG V++A P VAVK L +A +F E + + + N+
Sbjct: 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--------------- 782
V LLG C+ + L++EYM G L+ +LR+ +
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 783 -----KIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837
IA A G+A+L +HRD+ N L+ E K+ADFGL+R I
Sbjct: 173 CAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNI----- 224
Query: 838 HVSTDI--AGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKD 889
S D A IP PE R TT DV+++GV+L E+ + G +P
Sbjct: 225 -YSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY-YGMAH 282
Query: 890 IEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKP---------MMLKMLRIAGDCLSDNP 940
E V ++ G +L P +M C S P
Sbjct: 283 EE-------VIYYVRDGN---ILA--------CPENCPLELYNLMR-------LCWSKLP 317
Query: 941 AMRPTMLHVLKFLKEI 956
A RP+ + + L+ +
Sbjct: 318 ADRPSFCSIHRILQRM 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 6e-37
Identities = 67/338 (19%), Positives = 119/338 (35%), Gaps = 40/338 (11%)
Query: 187 LERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLS 246
L L N +K E + L L+LN N+ + P + +L TL L +N L
Sbjct: 34 TRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK 93
Query: 247 GLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLS 306
+ L+ L L +S N + F+ ++ +L + ++ N L
Sbjct: 94 LIPLGVFTGLSNLTKLDISENKIV----ILLDYMFQ--DLYNLKSL------EVGDNDLV 141
Query: 307 GPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK 366
+ L L L+ +LS L L L L + F +
Sbjct: 142 YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR 201
Query: 367 LQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELD 426
L+ L + + ++ + L L++T L+ + +L L L+LS+N +
Sbjct: 202 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS 261
Query: 427 GQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNL 486
S L +L L + L +L+ + F G L
Sbjct: 262 TIEGSMLHELLRLQEIQLVGGQLA------------------VVEPYAFRG--------L 295
Query: 487 SYLTNLDLHENKFTGEIPPDL-GNLMQLEYLDVSRNRL 523
+YL L++ N+ T + + ++ LE L + N L
Sbjct: 296 NYLRVLNVSGNQLT-TLEESVFHSVGNLETLILDSNPL 332
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 4e-33
Identities = 82/352 (23%), Positives = 140/352 (39%), Gaps = 20/352 (5%)
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIP 358
DL NR+ +E S + +L LN N++S PG+ + L NL TL L N+L IP
Sbjct: 38 DLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL-IP 96
Query: 359 SE-FGDSIKLQGLYLGNNQLTGSIPW-SLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELT 416
F L L + N++ + L L L + N L +F L L
Sbjct: 97 LGVFTGLSNLTKLDISENKIV-ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLE 155
Query: 417 HLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFD 476
L L L +LS++ L+ L L+H ++ D F K+ ++ D
Sbjct: 156 QLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEIS-HWPYLD 214
Query: 477 GGLPRSLGNLSYLTNLDLHENKFTGEIPPD-LGNLMQLEYLDVSRNRLCGQIPETM-CSL 534
P L L+ LT+L + T +P + +L+ L +L++S N + I +M L
Sbjct: 215 TMTPNCLYGLN-LTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPI-STIEGSMLHEL 271
Query: 535 SNLLYLSLAENRLEGMVPRSGI-CQNLSKISLTGNKDLCGKIIGSNCQVKTFGKLALLHA 593
L + L +L + P + L ++++GN+ + + F + L
Sbjct: 272 LRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQ-------LTTLEESVFHSVGNLET 324
Query: 594 FGLAG--LVVGCVFIVLTTVIALRKQIKRRSRCSDPEEIEETKLNSFSDHNL 643
L L C + + +++ C+ PE ++ + F D L
Sbjct: 325 LILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLL 376
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 124 bits (312), Expect = 5e-30
Identities = 56/251 (22%), Positives = 90/251 (35%), Gaps = 10/251 (3%)
Query: 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSI 381
+L + +P + T LDL +N++ EF L+ L L N ++
Sbjct: 16 VLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVE 72
Query: 382 PWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVG 441
P + +L L L L N+L F L LT LD+S N++ L ++ NL
Sbjct: 73 PGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKS 132
Query: 442 LYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTG 501
L + N L FS + + + +L +L L L L
Sbjct: 133 LEVGDNDLVYISHRAFSGLN--SLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNIN- 189
Query: 502 EIPPD-LGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGI--CQ 558
I L +L+ L++S + NL LS+ L VP +
Sbjct: 190 AIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYLAVRHLV 248
Query: 559 NLSKISLTGNK 569
L ++L+ N
Sbjct: 249 YLRFLNLSYNP 259
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 1e-26
Identities = 60/330 (18%), Positives = 118/330 (35%), Gaps = 43/330 (13%)
Query: 28 NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEI-GNCSMLKSISLSNNFLSGSIPREL 86
N++ ++ +E L L+ N + + P N L+++ L +N L IP +
Sbjct: 42 NRIKTLNQDEFASFPHLEELELNENI-VSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGV 99
Query: 87 CTS-ESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEY-LSKLP-LMVLD 143
T +L ++D+ N + ++ +F+ NL L + N + I S L L L
Sbjct: 100 FTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL-VYISHRAFSGLNSLEQLT 158
Query: 144 LDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPK 203
L+ N T I ++ + L+ + + Y L+ L +++ +
Sbjct: 159 LEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTP 218
Query: 204 EIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLV 263
L+ L + + + + L L+L N +S + + +L +LQ +
Sbjct: 219 NCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQ 278
Query: 264 LSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLL 323
L L+ + FR L++++ L
Sbjct: 279 LVGGQLAV-VEPYA---FR-----GLNYLRV---------------------------LN 302
Query: 324 LNNNMLSGKIPGSLSRLTNLTTLDLSRNQL 353
++ N L+ + NL TL L N L
Sbjct: 303 VSGNQLTTLEESVFHSVGNLETLILDSNPL 332
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 7e-23
Identities = 58/276 (21%), Positives = 103/276 (37%), Gaps = 12/276 (4%)
Query: 2 LSFNALSGSLPEELSDLPIL-TFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
L+ N +S P ++L L T N+L + + L +S N+ I +
Sbjct: 63 LNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK-IVILLD 121
Query: 61 EI-GNCSMLKSISLSNNFLSGSIPRE-LCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQ 118
+ + LKS+ + +N L I SLE++ L+ LT L
Sbjct: 122 YMFQDLYNLKSLEVGDNDLV-YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIV 180
Query: 119 LVIFRNHIYGSIPEY-LSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGS 176
L + +I +I +Y +L L VL++ + + + L S + L +
Sbjct: 181 LRLRHLNIN-AIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-A 238
Query: 177 LPYEV-GNAAALERLVLTNNMLKGHLPKEI-GNLSALSVLDLNSNLFDGIIPYELGDCIS 234
+PY + L L L+ N + + + L L + L + PY
Sbjct: 239 VPYLAVRHLVYLRFLNLSYNPIS-TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 297
Query: 235 LTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270
L L++ N L+ L + L+ L+L N L+
Sbjct: 298 LRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 7e-37
Identities = 87/313 (27%), Positives = 128/313 (40%), Gaps = 82/313 (26%)
Query: 687 IGDGGFGTVYKAALPDGK--------TVAVKKL-SQAKTQGHREFTAEMETLGKV-KHQN 736
+G+G FG V A VAVK L S A + + +EME + + KH+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY------------KI 784
++ LLG C+ D ++ EY G+L +L+ R ++ +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 785 ACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDI- 843
A ARG+ +L + IHRD+ A N+L+ E+ K+ADFGLAR I D
Sbjct: 197 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH------HIDYY 247
Query: 844 -AGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP----TGPEFKDIEG 892
T G +P PE T + DV+SFGV+L E+ T G P E
Sbjct: 248 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------ 301
Query: 893 GNLVGWVFQKMKKGQAADVLDPTVLTADSKP---------MMLKMLRIAGDCLSDNPAMR 943
+F+ +K+G +D KP MM DC P+ R
Sbjct: 302 ------LFKLLKEGH---RMD--------KPSNCTNELYMMMR-------DCWHAVPSQR 337
Query: 944 PTMLHVLKFLKEI 956
PT +++ L I
Sbjct: 338 PTFKQLVEDLDRI 350
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 8e-37
Identities = 69/282 (24%), Positives = 115/282 (40%), Gaps = 38/282 (13%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVK--KLSQAKTQGHREFTAEMETLGKVKHQNLVPLLG 742
IG G F TVYK VA + + + F E E L ++H N+V
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92
Query: 743 YC-SFDEEKLLVY---EYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAARGLAFLH 796
S + K + E M +G+L R +++ + + +I +GL FLH
Sbjct: 93 SWESTVKGKKCIVLVTELMTSGTL-KTYLKRFKVMKIKVL-RSWCRQIL----KGLQFLH 146
Query: 797 HGFTPHIIHRDIKASNILLNEEF-EAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG 855
TP IIHRD+K NI + K+ D GLA L A + + GT ++ PE
Sbjct: 147 -TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA---SFAKAVIGTPEFMAPEMY 202
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915
+ DVY+FG+ +LE+ T + P + + + +++++ G
Sbjct: 203 EEK-YDESVDVYAFGMCMLEMATSEYP----YSECQN---AAQIYRRVTSGVKPASF-DK 253
Query: 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKE 955
V + K ++ C+ N R ++ +L F +E
Sbjct: 254 VAIPEVKEIIEG-------CIRQNKDERYSIKDLLNHAFFQE 288
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 1e-36
Identities = 91/353 (25%), Positives = 133/353 (37%), Gaps = 84/353 (23%)
Query: 642 NLYFLSSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAAL- 700
+ L E L + + +E P RL L L G G FG V +A
Sbjct: 2 DPDELPLDEHCERLPYDASKWEFPRDRLKLGKPL------------GRGAFGQVIEADAF 49
Query: 701 -----PDGKTVAVKKL-SQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLV 753
+TVAVK L A HR +E++ L + H N+V LLG C+ L+V
Sbjct: 50 GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
Query: 754 -YEYMVNGSLDLWLRNRTGSLEVLGWDKRY------------KIACGAARGLAFLHHGFT 800
E+ G+L +LR++ + A+G+ FL +
Sbjct: 110 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---S 166
Query: 801 PHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDI--AGTFGYIP-----PE 853
IHRD+ A NILL+E+ K+ DFGLAR I +P PE
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDI------YKDPDYVRKGDARLPLKWMAPE 220
Query: 854 YGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912
T + DV+SFGV+L E+ + G P P K E +++K+G +
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPY-PGVKIDEE------FCRRLKEGT---RM 270
Query: 913 DPTVLTADSKP---------MMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
P ML DC P+ RPT +++ L +
Sbjct: 271 R--------APDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGNL 308
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 1e-36
Identities = 74/316 (23%), Positives = 115/316 (36%), Gaps = 83/316 (26%)
Query: 685 NIIGDGGFGTVYKAALPDGK------TVAVKKL-SQAKTQGHREFTAEMETLGKV-KHQN 736
+G G FG V +A TVAVK L A +E++ L + H N
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNR--------------TGSLEVLGWDKRY 782
+V LLG C+ L++ EY G L +LR + L +
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 783 KIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD 842
+ A+G+AFL + + IHRD+ A NILL K+ DFGLAR I +
Sbjct: 149 SFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDI------KNDS 199
Query: 843 I--AGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP-----TGPEFKD 889
+P PE + T DV+S+G+ L EL + G P +
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--- 256
Query: 890 IEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKP---------MMLKMLRIAGDCLSDNP 940
++ +K+G + P +M C +P
Sbjct: 257 ---------FYKMIKEGF---RML--------SPEHAPAEMYDIMK-------TCWDADP 289
Query: 941 AMRPTMLHVLKFLKEI 956
RPT +++ +++
Sbjct: 290 LKRPTFKQIVQLIEKQ 305
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 5e-36
Identities = 69/294 (23%), Positives = 117/294 (39%), Gaps = 58/294 (19%)
Query: 679 NNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNL 737
+F + +IG GGFG V+KA DGKT +K++ + RE ++ L K+ H N+
Sbjct: 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNI 66
Query: 738 VPLLGYCSFDEEKL------------------LVYEYMVNGSLDLWLRNRTGSL--EVLG 777
V +D + E+ G+L+ W+ R G +VL
Sbjct: 67 VHY--NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA 124
Query: 778 WDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837
++ +G+ ++H + +I+RD+K SNI L + + K+ DFGL +
Sbjct: 125 L----ELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 177
Query: 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVG 897
T GT Y+ PE S D+Y+ G+IL EL+ + +
Sbjct: 178 R--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDT----AFETSK----- 226
Query: 898 WVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
F ++ G + K ++ K+L P RP +L+
Sbjct: 227 -FFTDLRDGII-----SDIFDKKEKTLLQKLLSK-------KPEDRPNTSEILR 267
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 5e-36
Identities = 90/491 (18%), Positives = 169/491 (34%), Gaps = 31/491 (6%)
Query: 70 SISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGS 129
+ S N L +P++L S+ +++ N ++ S L L+I N I
Sbjct: 4 LVDRSKNGLI-HVPKDL--SQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYL 60
Query: 130 IPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPY--EVGNAAA 186
L LDL N I S + L + N + +LP E GN +
Sbjct: 61 DISVFKFNQELEYLDLSHNKLVKI---SCHPTVNLKHLDLSFNAFD-ALPICKEFGNMSQ 116
Query: 187 LERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLS 246
L+ L L+ L+ I +L+ VL + + + T L +
Sbjct: 117 LKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETY--GEKEDPEGLQDFNTESLHIVFPT 174
Query: 247 GLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLS 306
I D++ L +N+ + + + + L L+ +
Sbjct: 175 NKEFHFILDVSVKTVANLELSNIKC-VLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETT 233
Query: 307 GPIPEELGSCVVVVDLL--------LNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIP 358
+ V + L + S + L L+ + + P
Sbjct: 234 WNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQS 293
Query: 359 SEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHL 418
+ + + + + L+ + N L+ V + G+L EL L
Sbjct: 294 YIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETL 353
Query: 419 DLSFNELD--GQLPSSLSNILNLVGLYLQHNKL-SGPVDELFSNSAAWKIATMNMSNNLF 475
L N+L ++ + + +L L + N + S + + ++NMS+N+
Sbjct: 354 ILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTK--SLLSLNMSSNIL 411
Query: 476 DGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMC-SL 534
+ R L + LDLH NK IP + L L+ L+V+ N+L +P+ + L
Sbjct: 412 TDTIFRCL--PPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQL-KSVPDGIFDRL 467
Query: 535 SNLLYLSLAEN 545
++L + L N
Sbjct: 468 TSLQKIWLHTN 478
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 1e-31
Identities = 88/564 (15%), Positives = 170/564 (30%), Gaps = 92/564 (16%)
Query: 2 LSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPE 61
+S N +S ++ L L L++S N+ I +
Sbjct: 28 ISQNYISELWTSDILSLSKLRI-----------------------LIISHNR-IQYLDIS 63
Query: 62 I-GNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTG-TIEGVFEKCSNLSQL 119
+ L+ + LS+N L +L+ +DL N I F S L L
Sbjct: 64 VFKFNQELEYLDLSHNKLVKISCHPT---VNLKHLDLSFNAFDALPICKEFGNMSQLKFL 120
Query: 120 VIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPY 179
+ H+ S ++ L + + L + + SL
Sbjct: 121 GLSTTHLEKSSVLPIAHLNISKVLLVLGE----------TYGEKEDPEGLQDFNTESLHI 170
Query: 180 EVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLD 239
++ + +K E+ N+ + + S + + +S TL+
Sbjct: 171 VFPTNKEFHFIL--DVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLN 228
Query: 240 LGNNNLSGLI-PEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVF 298
+ I ++ + +S+ L G + + Y +
Sbjct: 229 NIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDY------------SGTSLK 276
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIP 358
LS +++ +++ +N+ + + +
Sbjct: 277 ALSIHQVV-------------------SDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHM 317
Query: 359 SEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLS--GKVPTSFGNLKELT 416
L NN LT ++ + G L L L L N+L K+ +K L
Sbjct: 318 LCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQ 377
Query: 417 HLDLSFNELDGQLPSSL-SNILNLVGLYLQHNKL-SGPVDELFSNSAAWKIATMNMSNNL 474
LD+S N + S +L+ L + N L L I +++ +N
Sbjct: 378 QLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPR-----IKVLDLHSNK 432
Query: 475 FDGGLPRSLGNLSYLTNLDLHENKFTGEIPPD-LGNLMQLEYLDVSRNRLCGQIPETMCS 533
+P+ + L L L++ N+ +P L L+ + + N CS
Sbjct: 433 IK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPW-------DCS 483
Query: 534 LSNLLYLSLAENRLEGMVPRSGIC 557
+ YLS N+ S C
Sbjct: 484 CPRIDYLSRWLNKNSQKEQGSAKC 507
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 6e-29
Identities = 70/442 (15%), Positives = 143/442 (32%), Gaps = 47/442 (10%)
Query: 141 VLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEV-GNAAALERLVLTNNMLKG 199
+L++ N + + I + L ++N ++ L V LE L L++N L
Sbjct: 25 ILNISQNYISELWTSDILSLSKLRILIISHNRIQ-YLDISVFKFNQELEYLDLSHNKLV- 82
Query: 200 HLPKEIGNLSALSVLDLNSNLFDGI-IPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQ 258
+ L LDL+ N FD + I E G+ L L L +L IA L
Sbjct: 83 KIS--CHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNI 140
Query: 259 LQCLVLSHNNLSGPIPSK--PSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSC 316
+ L++ + ++ + + H + D+S ++ +
Sbjct: 141 SKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCV 200
Query: 317 VVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQ 376
+ ++L+ L ++ + N + + + + N +
Sbjct: 201 LEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRIL--QLVWHTTVWYFSISNVK 258
Query: 377 LTGSIPWSLG-----SLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPS 431
L G + + SL L + + + + + + +
Sbjct: 259 LQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHML 318
Query: 432 SLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTN 491
S I + L +N L+ + +L+ L
Sbjct: 319 CPSKISPFLHLDFSNNLLT------------------DTVFENCG--------HLTELET 352
Query: 492 LDLHENKFTGEIPPDLG---NLMQLEYLDVSRNRLCGQIPETMCS-LSNLLYLSLAENRL 547
L L N+ E+ + L+ LD+S+N + + CS +LL L+++ N L
Sbjct: 353 LILQMNQLK-ELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNIL 411
Query: 548 EGMVPRSGICQNLSKISLTGNK 569
+ R + + + L NK
Sbjct: 412 TDTIFRC-LPPRIKVLDLHSNK 432
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 3e-22
Identities = 61/379 (16%), Positives = 123/379 (32%), Gaps = 33/379 (8%)
Query: 200 HLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQL 259
H+PK++ ++L+++ N + ++ L L + +N + L +L
Sbjct: 14 HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQEL 71
Query: 260 QCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRL-SGPIPEELGSCVV 318
+ L LSHN L I P ++H DLS+N + PI +E G+
Sbjct: 72 EYLDLSHNKLVK-ISCHP-----------TVNLKH---LDLSFNAFDALPICKEFGNMSQ 116
Query: 319 VVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSI---KLQGLYLGNN 375
+ L L+ L ++ L L + E L ++ N
Sbjct: 117 LKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNK 176
Query: 376 QLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNL---------KELTHLDLSFNELD 426
+ + S+ ++ L N+ K L LT ++
Sbjct: 177 EFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNS 236
Query: 427 GQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATM---NMSNNLFDGGLPRSL 483
L + + + KL G +D + + + + + +++F
Sbjct: 237 FIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIY 296
Query: 484 GNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLA 543
S + + + + +LD S N L + E L+ L L L
Sbjct: 297 EIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQ 356
Query: 544 ENRLEGMVPRSGICQNLSK 562
N+L+ + + + +
Sbjct: 357 MNQLKELSKIAEMTTQMKS 375
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 75.3 bits (185), Expect = 3e-14
Identities = 38/224 (16%), Positives = 84/224 (37%), Gaps = 11/224 (4%)
Query: 342 NLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKL 401
+ +D S+N L +P + L + N ++ + SL L L ++ N++
Sbjct: 1 SEFLVDRSKNGLIH-VPKDLSQK--TTILNISQNYISELWTSDILSLSKLRILIISHNRI 57
Query: 402 SGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKL-SGPVDELFSNS 460
+ F +EL +LDLS N+L + +NL L L N + P+ + F N
Sbjct: 58 QYLDISVFKFNQELEYLDLSHNKLVK-ISC--HPTVNLKHLDLSFNAFDALPICKEFGN- 113
Query: 461 AAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSR 520
++ + +S + + +L+ L + + + P L +
Sbjct: 114 -MSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDP--EGLQDFNTESLHI 170
Query: 521 NRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKIS 564
+ + +S +L + ++ ++ + LS ++
Sbjct: 171 VFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA 214
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 2e-35
Identities = 68/321 (21%), Positives = 116/321 (36%), Gaps = 88/321 (27%)
Query: 685 NIIGDGGFGTVYKAALPDGK------TVAVKKL-SQAKTQGHREFTAEMETLGKV-KHQN 736
++G G FG V A VAVK L +A + +E++ + ++ H+N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGA-------- 788
+V LLG C+ L++EY G L +LR++ + +
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 789 -----------ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837
A+G+ FL +HRD+ A N+L+ K+ DFGLAR I
Sbjct: 171 FEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDI----- 222
Query: 838 HVSTDI--AGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP-----TG 884
+S +P PE G T + DV+S+G++L E+ + G P
Sbjct: 223 -MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 281
Query: 885 PEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKP---------MMLKMLRIAGDC 935
++ ++ G +D +P +M C
Sbjct: 282 AN------------FYKLIQNGF---KMD--------QPFYATEEIYIIMQ-------SC 311
Query: 936 LSDNPAMRPTMLHVLKFLKEI 956
+ + RP+ ++ FL
Sbjct: 312 WAFDSRKRPSFPNLTSFLGCQ 332
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 5e-35
Identities = 68/324 (20%), Positives = 117/324 (36%), Gaps = 57/324 (17%)
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293
LDL NN ++ + +L L L+L +N +S F A + L
Sbjct: 53 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS----KISPGAF--APLVKLE--- 103
Query: 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQL 353
LS N+L +PE++ + L ++ N ++ + L + ++L N L
Sbjct: 104 ---RLYLSKNQLKE-LPEKMPKTLQE--LRVHENEITKVRKSVFNGLNQMIVVELGTNPL 157
Query: 354 T-GPIPSE-FGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGN 411
I + F KL + + + +T +IP G L +L+L GNK++ S
Sbjct: 158 KSSGIENGAFQGMKKLSYIRIADTNIT-TIPQ--GLPPSLTELHLDGNKITKVDAASLKG 214
Query: 412 LKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMS 471
L L L LSFN + SL+N +L L+L +NKL
Sbjct: 215 LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-------------------- 254
Query: 472 NNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPD-------LGNLMQLEYLDVSRNRL- 523
+P L + Y+ + LH N + I + + + N +
Sbjct: 255 -------VPGGLADHKYIQVVYLHNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306
Query: 524 CGQIPE-TMCSLSNLLYLSLAENR 546
+I T + + L +
Sbjct: 307 YWEIQPSTFRCVYVRAAVQLGNYK 330
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 4e-32
Identities = 65/313 (20%), Positives = 117/313 (37%), Gaps = 30/313 (9%)
Query: 297 VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGP 356
V S L +P++L + L L NN ++ G L NL TL L N+++
Sbjct: 35 VVQCSDLGLEK-VPKDLPPDTAL--LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKI 91
Query: 357 IPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELT 416
P F +KL+ LYL NQL +P L +L + N+++ + F L ++
Sbjct: 92 SPGAFAPLVKLERLYLSKNQLK-ELP--EKMPKTLQELRVHENEITKVRKSVFNGLNQMI 148
Query: 417 HLDLSFNELDGQL--PSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNL 474
++L N L + + L + + ++ L + + +++ N
Sbjct: 149 VVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPS-----LTELHLDGNK 203
Query: 475 FDGGLPRSLGNLSYLTNLDLHENKFTGEIPPD-LGNLMQLEYLDVSRNRLCGQIPETMCS 533
SL L+ L L L N + + L N L L ++ N+L ++P +
Sbjct: 204 ITKVDAASLKGLNNLAKLGLSFNSIS-AVDNGSLANTPHLRELHLNNNKL-VKVPGGLAD 261
Query: 534 LSNLLYLSLAENRLEGMVPRSGICQ--------NLSKISLTGNKDLCGKIIGSNCQVKTF 585
+ + L N + + + C + S +SL N + Q TF
Sbjct: 262 HKYIQVVYLHNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSN-----PVQYWEIQPSTF 315
Query: 586 GKLALLHAFGLAG 598
+ + A L
Sbjct: 316 RCVYVRAAVQLGN 328
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 6e-30
Identities = 68/328 (20%), Positives = 127/328 (38%), Gaps = 46/328 (14%)
Query: 187 LERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLS 246
L + ++ L+ +PK++ ++LDL +N I + + +L TL L NN +S
Sbjct: 33 LRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS 89
Query: 247 GLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVF------DL 300
+ P A L +L+ L LS N L +P + +
Sbjct: 90 KISPGAFAPLVKLERLYLSKNQLKE-LPE--------------------KMPKTLQELRV 128
Query: 301 SYNRLSGPIPEE-LGSCVVVVDLLLNNNMLSGKI--PGSLSRLTNLTTLDLSRNQLTGPI 357
N ++ + + ++ + L N L G+ + L+ + ++ +T I
Sbjct: 129 HENEITK-VRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-I 186
Query: 358 PSEFGDSIKLQGLYLGNNQLTGSIP-WSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELT 416
P S L L+L N++T + SL L L KL L+ N +S S N L
Sbjct: 187 PQGLPPS--LTELHLDGNKIT-KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLR 243
Query: 417 HLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAW----KIATMNMSN 472
L L+ N+L ++P L++ + +YL +N +S F + +++ +
Sbjct: 244 ELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFS 302
Query: 473 N-LFDGGLPRSL-GNLSYLTNLDLHENK 498
N + + S + + L K
Sbjct: 303 NPVQYWEIQPSTFRCVYVRAAVQLGNYK 330
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-24
Identities = 59/329 (17%), Positives = 116/329 (35%), Gaps = 42/329 (12%)
Query: 51 SNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVF 110
S+ + K+P ++ + L NN ++ + ++L + L N ++ G F
Sbjct: 39 SDLGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAF 96
Query: 111 EKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFS-AA 169
L +L + +N + +PE + K L L + N T + ++
Sbjct: 97 APLVKLERLYLSKNQLK-ELPEKMPK-TLQELRVHENEITKVRKSVFNGLNQMIVVELGT 154
Query: 170 NNLLEGSLPYEV-GNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYE 228
N L + L + + + + +P+ G +L+ L L+ N +
Sbjct: 155 NPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQ--GLPPSLTELHLDGNKITKVDAAS 211
Query: 229 LGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPD 288
L +L L L N++S + +A+ L+ L L++N L +P + D
Sbjct: 212 LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VP---------GGLAD 261
Query: 289 LSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDL 348
+IQ L N +S + +N PG ++ + + + L
Sbjct: 262 HKYIQV---VYLHNNNISA----------------IGSNDFCP--PGYNTKKASYSGVSL 300
Query: 349 SRNQLT-GPIPSE-FGDSIKLQGLYLGNN 375
N + I F + LGN
Sbjct: 301 FSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 1e-13
Identities = 56/254 (22%), Positives = 92/254 (36%), Gaps = 41/254 (16%)
Query: 1 MLSFNALSGSLPEEL-SDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQF-IGKI 58
LS N L LPE++ L L N+++ S NQM + L +N I
Sbjct: 106 YLSKNQLK-ELPEKMPKTLQELRVHE--NEITKVRKSVFNGLNQMIVVELGTNPLKSSGI 162
Query: 59 PPEI-GNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLS 117
L I +++ ++ +IP+ L SL E+ LDGN +T + +NL+
Sbjct: 163 ENGAFQGMKKLSYIRIADTNIT-TIPQGLPP--SLTELHLDGNKITKVDAASLKGLNNLA 219
Query: 118 QLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSL 177
L L N+ + + S+ N+ L E NN L +
Sbjct: 220 -----------------------KLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KV 255
Query: 178 PYEVGNAAALERLVLTNNMLKG------HLPKEIGNLSALSVLDLNSN--LFDGIIPYEL 229
P + + ++ + L NN + P ++ S + L SN + I P
Sbjct: 256 PGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTF 315
Query: 230 GDCISLTTLDLGNN 243
+ LGN
Sbjct: 316 RCVYVRAAVQLGNY 329
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 8e-35
Identities = 69/288 (23%), Positives = 126/288 (43%), Gaps = 40/288 (13%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKK--LSQAKTQGHREFTAEMETLGKVKHQ 735
+ + IG+G FG + DG+ +K+ +S+ ++ E E+ L +KH
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83
Query: 736 NLVPLLGYCSFDEEKLL--VYEYMVNGSLDLWLRNRTGSL----EVLGWDKRYKIACGAA 789
N+V SF+E L V +Y G L + + G L ++L W
Sbjct: 84 NIVQYRE--SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW------FVQIC 135
Query: 790 RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGY 849
L +H I+HRDIK+ NI L ++ ++ DFG+AR++++ GT Y
Sbjct: 136 LALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA-CIGTPYY 191
Query: 850 IPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909
+ PE ++ + D+++ G +L EL T K F E G++ + K+ G
Sbjct: 192 LSPEICENKPYNNKSDIWALGCVLYELCTLKHA----F---EAGSMKN-LVLKIISGSFP 243
Query: 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKE 955
V + D + ++ ++ + NP RP++ +L+ F+ +
Sbjct: 244 PV--SLHYSYDLRSLVSQLFKR-------NPRDRPSVNSILEKGFIAK 282
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 1e-34
Identities = 64/310 (20%), Positives = 114/310 (36%), Gaps = 54/310 (17%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQN 736
+F +G GGFG V++A D A+K++ + RE E++ L K++H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 737 LVPLLGYCSFDEE-----------KLLVY---EYMVNGSLDLWLRNRTGSLEVLGWDKRY 782
+V + ++ E+ K+ +Y + +L W+ R E
Sbjct: 65 IVRY--FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEE-RERSVCL 121
Query: 783 KIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS--------- 833
I A + FLH + ++HRD+K SNI + KV DFGL +
Sbjct: 122 HIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 834 --ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIE 891
T GT Y+ PE + + D++S G+IL EL+ P
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---P-------FS 228
Query: 892 GGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
++ + + T M+ ML +P RP +++++
Sbjct: 229 TQMERVRTLTDVRNLKFPPL--FTQKYPCEYVMVQDMLSP-------SPMERPEAINIIE 279
Query: 952 --FLKEIKVE 959
+++
Sbjct: 280 NAVFEDLDFP 289
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 134 bits (338), Expect = 1e-34
Identities = 64/294 (21%), Positives = 108/294 (36%), Gaps = 34/294 (11%)
Query: 680 NFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLV 738
++ +G+GGF V L DG A+K++ + Q E E + H N++
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89
Query: 739 PLLGYCSFDEEK----LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAF 794
L+ YC + L+ + G+L + L D+ + G RGL
Sbjct: 90 RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIA--------GT 846
+H HRD+K +NILL +E + + D G + T
Sbjct: 150 IHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206
Query: 847 FGYIPPE--YGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKM 903
Y PE QS R DV+S G +L ++ G+ P + + G
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP----Y---DMVFQKGDSVALA 259
Query: 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957
+ Q + P S L L + ++ +P RP + +L L+ ++
Sbjct: 260 VQNQLSIPQSPRH----SSA--LWQL-LNS-MMTVDPHQRPHIPLLLSQLEALQ 305
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 5e-34
Identities = 65/295 (22%), Positives = 117/295 (39%), Gaps = 44/295 (14%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVK--KLSQAKTQGHREFTAEMETLGKVKHQN 736
+ IG GG V++ + A+K L +A Q + E+ L K++ +
Sbjct: 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87
Query: 737 L--VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAF 794
+ L Y D+ +V E N L+ WL+ + S++ +R +
Sbjct: 88 DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKK-KSIDP---WERKSYWKNMLEAVHT 142
Query: 795 LH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD-IAGTFGYIPP 852
+H HG I+H D+K +N L+ + K+ DFG+A + T V D GT Y+PP
Sbjct: 143 IHQHG----IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 197
Query: 853 E------YGQSGRSTTRG-----DVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901
E + + DV+S G IL + GK P F+ I N + +
Sbjct: 198 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP----FQQII--NQISKLHA 251
Query: 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLK 954
+ + P + D + ++ L+ +P R ++ +L +++
Sbjct: 252 IIDPNHEIEF--PDIPEKDLQDVLKCCLKR-------DPKQRISIPELLAHPYVQ 297
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 2e-33
Identities = 65/285 (22%), Positives = 116/285 (40%), Gaps = 26/285 (9%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHRE---FTAEMETLGKVKH 734
NF IG G F VY+A L DG VA+KK+ + E++ L ++ H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 735 QNLVPLLGYCSFDEEKLL--VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGL 792
N++ SF E+ L V E G L +++ ++ +K L
Sbjct: 92 PNVIKYYA--SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
+H + ++HRDIK +N+ + K+ D GL R S+ T + + GT Y+ P
Sbjct: 150 EHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS-LVGTPYYMSP 205
Query: 853 EYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912
E + D++S G +L E+ + P F + NL + +K+++ L
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQSP----FYG-DKMNLYS-LCKKIEQCDYPP-L 258
Query: 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957
+ + + ++ + +P RP + +V K +
Sbjct: 259 PSDHYSEELRQLVNMCINP-------DPEKRPDVTYVYDVAKRMH 296
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 3e-33
Identities = 65/296 (21%), Positives = 119/296 (40%), Gaps = 44/296 (14%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVK--KLSQAKTQGHREFTAEMETLGKVKHQN 736
+ IG GG V++ + A+K L +A Q + E+ L K++ +
Sbjct: 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68
Query: 737 L--VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAF 794
+ L Y D+ +V E N L+ WL+ + S++ +R +
Sbjct: 69 DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKK-KSIDP---WERKSYWKNMLEAVHT 123
Query: 795 LH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD-IAGTFGYIPP 852
+H HG I+H D+K +N L+ + K+ DFG+A + T V D GT Y+PP
Sbjct: 124 IHQHG----IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 178
Query: 853 E-----------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901
E + + + DV+S G IL + GK P F+ I N + +
Sbjct: 179 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP----FQQII--NQISKLHA 232
Query: 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKE 955
+ ++ P + D + ++ L+ +P R ++ +L +++
Sbjct: 233 IIDPNH--EIEFPDIPEKDLQDVLKCCLKR-------DPKQRISIPELLAHPYVQI 279
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 3e-33
Identities = 67/285 (23%), Positives = 112/285 (39%), Gaps = 41/285 (14%)
Query: 680 NFCKTNIIGDGGFGTVYKA-ALPDGKTVAVK--KLSQAKTQGHREFTAEMETLGKV-KHQ 735
+F + + +G G +G V+K + DG+ AVK + AE+ + KV +H
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP 117
Query: 736 NLVPLLGYCSFDEEKLL--VYEYMVNGSLDLWLRNRTGSL-EVLGWDKRYKIACGAARGL 792
V L +++E +L E SL SL E W L
Sbjct: 118 CCVRL--EQAWEEGGILYLQTEL-CGPSLQQHCEAWGASLPEAQVWG----YLRDTLLAL 170
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
A LH + ++H D+K +NI L K+ DFGL + G Y+ P
Sbjct: 171 AHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV--QEGDPRYMAP 225
Query: 853 EYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912
E Q T DV+S G+ +LE+ E EG +Q++++G
Sbjct: 226 ELLQGSYGTA-ADVFSLGLTILEVACNMEL----PHGGEG-------WQQLRQGYLPPEF 273
Query: 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKE 955
L+++ + +++ ML +P +R T +L L++
Sbjct: 274 -TAGLSSELRSVLVMMLEP-------DPKLRATAEALLALPVLRQ 310
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 4e-33
Identities = 65/298 (21%), Positives = 118/298 (39%), Gaps = 48/298 (16%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVK--KLSQAKTQGHREFTAEMETLGKVKHQN 736
+ IG GG V++ + A+K L +A Q + E+ L K++ +
Sbjct: 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 737 L--VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAARGL 792
+ L Y D+ +V E N L+ WL+ + S++ K Y + +
Sbjct: 116 DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKK-KSID-PWERKSYWKNMLE----AV 168
Query: 793 AFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD-IAGTFGYI 850
+H HG I+H D+K +N L+ + K+ DFG+A + T V D G Y+
Sbjct: 169 HTIHQHG----IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 851 PPE-----------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWV 899
PPE + + + DV+S G IL + GK P F+ I N + +
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP----FQQII--NQISKL 277
Query: 900 FQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKE 955
+ + P + D + ++ L+ +P R ++ +L +++
Sbjct: 278 HAIIDPNHEIEF--PDIPEKDLQDVLKCCLKR-------DPKQRISIPELLAHPYVQI 326
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 5e-33
Identities = 65/304 (21%), Positives = 123/304 (40%), Gaps = 55/304 (18%)
Query: 678 TNNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN 736
++F + ++G G FG V KA D + A+KK+ + + +E+ L + HQ
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQY 63
Query: 737 LVPLLGYCSFDEEKL---------------LVYEYMVNGSLDLWLRNRTGSLEVLGWDKR 781
+V Y ++ E + + EY NG+L + + + + D+
Sbjct: 64 VVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR---DEY 118
Query: 782 YKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVST 841
+++ L+++H + IIHRD+K NI ++E K+ DFGLA+ + +
Sbjct: 119 WRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 842 DIA-------------GTFGYIPPE-YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEF 887
D GT Y+ E +G + D+YS G+I E++ P
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY------PFS 229
Query: 888 KDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTML 947
+E N+ +K++ + P + + K++R + +P RP
Sbjct: 230 TGMERVNI----LKKLRSV---SIEFPPDFDDNKMKVEKKIIR---LLIDHDPNKRPGAR 279
Query: 948 HVLK 951
+L
Sbjct: 280 TLLN 283
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 1e-32
Identities = 60/282 (21%), Positives = 112/282 (39%), Gaps = 29/282 (10%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKK--LSQAKTQGHREFTAEMETLGKVKHQ 735
++ IG G +G K DGK + K+ + +E+ L ++KH
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 736 NLVPLLGYCSFDEEK----LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARG 791
N+V Y + +V EY G L + T + L + ++
Sbjct: 66 NIVRY--YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 792 LAFLH--HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGY 849
L H ++HRD+K +N+ L+ + K+ DFGLAR+++ + T GT Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT-FVGTPYY 182
Query: 850 IPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909
+ PE + D++S G +L EL P F + + K+++G+
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP----F---TAFSQKE-LAGKIREGKFR 234
Query: 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+ P + + ++ +ML + RP++ +L+
Sbjct: 235 RI--PYRYSDELNEIITRMLNL-------KDYHRPSVEEILE 267
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 1e-32
Identities = 77/314 (24%), Positives = 131/314 (41%), Gaps = 49/314 (15%)
Query: 679 NNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLS-QAKTQGHREFTAEMETLGKVKHQN 736
++F K + +G G G V+K + P G +A K + + K + E++ L +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 737 LVPLLGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSL--EVLGWDKRYKIACGAARGLA 793
+V G + + ++ + E+M GSLD L+ + G + ++LG K++ +GL
Sbjct: 93 IVGFYG-AFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILG-----KVSIAVIKGLT 145
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA-RLI-SACETHVSTDIAGTFGYIP 851
+L I+HRD+K SNIL+N E K+ DFG++ +LI S + V GT Y+
Sbjct: 146 YLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----GTRSYMS 198
Query: 852 PEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF---QKMKKGQA 908
PE Q + + D++S G+ L+E+ G+ P P V +
Sbjct: 199 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPR 258
Query: 909 ADVLDPTVLTADSKPMMLK---MLRIAGD--------------------CLSDNPAMRPT 945
DS+P M + I + CL NPA R
Sbjct: 259 TPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERAD 318
Query: 946 MLHVLK--FLKEIK 957
+ ++ F+K
Sbjct: 319 LKQLMVHAFIKRSD 332
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 3e-32
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 687 IGDGGFGTVYKAALPD---GKTVAVKKLSQ--AKTQGHRE-FTAEMETLGKVKHQNLVPL 740
+G GG G VY+A D + VA+K +S+ + R E T G+++ ++VP+
Sbjct: 42 VGRGGMGDVYEAE--DTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPI 99
Query: 741 LGYCSFDEEKLLVYEYMVNG-SLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF 799
+ D + + +NG L LR R G L + I L H
Sbjct: 100 HDFGEIDGQLYVDMRL-INGVDLAAMLR-RQGPLAP---PRAVAIVRQIGSALDAAHAA- 153
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE-THVSTDIAGTFGYIPPEYGQSG 858
HRD+K NIL++ + A + DFG+A + + T + GT Y+ PE
Sbjct: 154 --GATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN-TVGTLYYMAPERFSES 210
Query: 859 RSTTRGDVYSFGVILLELVTGKEP 882
+T R D+Y+ +L E +TG P
Sbjct: 211 HATYRADIYALTCVLYECLTGSPP 234
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 4e-32
Identities = 82/480 (17%), Positives = 158/480 (32%), Gaps = 59/480 (12%)
Query: 27 KNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPREL 86
++ + + SL ++ I + I + L + ++N ++ ++
Sbjct: 27 AFEMQATDTISEEQLATLTSLDCHNSS-ITDMTG-IEKLTGLTKLICTSNNIT-TLDLSQ 83
Query: 87 CTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLD 145
T+ L + D N LT ++ + L+ L N + + +S+ P L L+
Sbjct: 84 NTN--LTYLACDSNKLT-NLD--VTPLTKLTYLNCDTNKL-TKLD--VSQNPLLTYLNCA 135
Query: 146 SNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEI 205
N T I + ++ L E N L V L L + N + L +
Sbjct: 136 RNTLTEI---DVSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKIT-ELD--V 187
Query: 206 GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLS 265
L+ L+ ++N + +L I LT LD +N L+ + + L QL S
Sbjct: 188 SQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI---DVTPLTQLTYFDCS 241
Query: 266 HNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLN 325
N L+ S S + L L +L ++
Sbjct: 242 VNPLTELDVSTLS------KLTTL---------HCIQTDLLE---IDLTHNTQLIYFQAE 283
Query: 326 NNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSL 385
++ ++ T L LD +T + + KL LYL N +LT + +
Sbjct: 284 GCRKIKELD--VTHNTQLYLLDCQAAGIT---ELDLSQNPKLVYLYLNNTELT-ELD--V 335
Query: 386 GSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQ 445
L L+ + +S G + L + + + +L+N + +
Sbjct: 336 SHNTKLKSLSCVNAHIQD--FSSVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPD 393
Query: 446 HNKLSG-PVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIP 504
G P++ + + AT N + L ++Y + T P
Sbjct: 394 LLDQFGNPMNIEPGDGGVYDQAT----NTITWENLSTDNPAVTYTFTSENGAIVGTVTTP 449
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 5e-32
Identities = 71/440 (16%), Positives = 146/440 (33%), Gaps = 55/440 (12%)
Query: 142 LDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHL 201
+ +S TL N+ + + + L +L+ T+N + L
Sbjct: 23 EVAAAFEMQATDTISEEQLATLTSLDCHNSSIT-DMT-GIEKLTGLTKLICTSNNIT-TL 79
Query: 202 PKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQC 261
+ + L+ L +SN + ++ LT L+ N L+ L ++ L
Sbjct: 80 D--LSQNTNLTYLACDSNKLTNL---DVTPLTKLTYLNCDTNKLTKL---DVSQNPLLTY 131
Query: 262 LVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVD 321
L + N L+ D+S D N+ + + +
Sbjct: 132 LNCARNTLT---------------EIDVSHNTQLTELDCHLNKKITKLD--VTPQTQLTT 174
Query: 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSI 381
L + N ++ +S+ L L+ N +T + +I+L L +N+LT I
Sbjct: 175 LDCSFNKITE---LDVSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLT-EI 227
Query: 382 PWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVG 441
+ L L + + N L+ L +LT L +L ++ L++ L+
Sbjct: 228 D--VTPLTQLTYFDCSVNPLT---ELDVSTLSKLTTLHCIQTDLL-EID--LTHNTQLIY 279
Query: 442 LYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTG 501
+ + +D + N+ ++ ++ L L L L L+ + T
Sbjct: 280 FQAEGCRKIKELD-VTHNT---QLYLLDCQAAGITE-LD--LSQNPKLVYLYLNNTELT- 331
Query: 502 EIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLS 561
E+ D+ + +L+ L + + + L AE + M + +L+
Sbjct: 332 EL--DVSHNTKLKSLSCVNAHIQ-DFSS-VGKIPALNNNFEAEGQTITMPKETLTNNSLT 387
Query: 562 KISLTGNKDLCGKIIGSNCQ 581
D G +
Sbjct: 388 IAVSPDLLDQFGNPMNIEPG 407
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 2e-31
Identities = 70/391 (17%), Positives = 135/391 (34%), Gaps = 42/391 (10%)
Query: 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNN 244
V ++ L+ L+ LD +++ + + LT L +NN
Sbjct: 18 DNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITDMTG--IEKLTGLTKLICTSNN 75
Query: 245 LSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSS----YFRQANMPDLSFIQHHG--VF 298
++ L ++ L L N L+ + + + L Q+
Sbjct: 76 ITTL---DLSQNTNLTYLACDSNKLTNLDVTPLTKLTYLNCDTNKLTKLDVSQNPLLTYL 132
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIP 358
+ + N L+ ++ + +L + N K+ ++ T LTTLD S N++T
Sbjct: 133 NCARNTLTEI---DVSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKITE--- 184
Query: 359 SEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHL 418
+ + L L N +T + L L L+ + NKL+ ++ L +LT+
Sbjct: 185 LDVSQNKLLNRLNCDTNNIT-KLD--LNQNIQLTFLDCSSNKLT-EID--VTPLTQLTYF 238
Query: 419 DLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGG 478
D S N L +L +S + L L+ L + ++
Sbjct: 239 DCSVNPLT-ELD--VSTLSKLTTLHCIQTDLLE-----IDLTHNTQLIYFQAEGCRKIKE 290
Query: 479 LPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLL 538
L + + + L LD T E+ DL +L YL ++ L ++ + + L
Sbjct: 291 LD--VTHNTQLYLLDCQAAGIT-EL--DLSQNPKLVYLYLNNTELT-ELD--VSHNTKLK 342
Query: 539 YLSLAENRLEGMVPRSGICQNLSKISLTGNK 569
LS ++ G L+ +
Sbjct: 343 SLSCVNAHIQD-FSSVGKIPALNNNFEAEGQ 372
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 6e-31
Identities = 81/460 (17%), Positives = 152/460 (33%), Gaps = 82/460 (17%)
Query: 90 ESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNN 148
++ + T E+ + L+ L + I + + KL L L SNN
Sbjct: 18 DNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSI-TDMTG-IEKLTGLTKLICTSNN 75
Query: 149 FTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNL 208
T + + + L + +N L +L V L L N L ++
Sbjct: 76 ITTL---DLSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDTNKLT---KLDVSQN 126
Query: 209 SALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNN 268
L+ L+ N I ++ LT LD N + + QL L S N
Sbjct: 127 PLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNK 181
Query: 269 LSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNM 328
++ + ++ + + N ++ +L + + L ++N
Sbjct: 182 IT------------ELDVSQNKLLNR---LNCDTNNITKL---DLNQNIQLTFLDCSSNK 223
Query: 329 LSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSL 388
L+ +I ++ LT LT D S N LT S KL L+ L I L
Sbjct: 224 LT-EID--VTPLTQLTYFDCSVNPLTELDVSTL---SKLTTLHCIQTDLL-EID--LTHN 274
Query: 389 GGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNK 448
L+ G + ++ + +L LD + +L LS LV LYL + +
Sbjct: 275 TQLIYFQAEGCRKIKELD--VTHNTQLYLLDCQAAGIT-ELD--LSQNPKLVYLYLNNTE 329
Query: 449 LSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLG 508
L+ L + + + L +L + +G
Sbjct: 330 LT----------------------EL-------DVSHNTKLKSLSCVNAHIQ-DFSS-VG 358
Query: 509 NLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLE 548
+ L + + +P+ + N L ++++ + L+
Sbjct: 359 KIPALNNNFEAEGQTI-TMPKETLTN-NSLTIAVSPDLLD 396
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 4e-24
Identities = 66/345 (19%), Positives = 111/345 (32%), Gaps = 68/345 (19%)
Query: 235 LTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQH 294
+ + LA L L +++++ +M + +
Sbjct: 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSIT--------------DMTGIEKLTG 65
Query: 295 HGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLT 354
+ N ++ +L + L ++N L+ + ++ LT LT L+ N+LT
Sbjct: 66 LTKLICTSNNITTL---DLSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDTNKLT 119
Query: 355 GPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKE 414
+ + L L N LT + L +L+ NK K+ +
Sbjct: 120 ---KLDVSQNPLLTYLNCARNTLT---EIDVSHNTQLTELDCHLNKKITKLD--VTPQTQ 171
Query: 415 LTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNL 474
LT LD SFN++ +S L L N ++
Sbjct: 172 LTTLDCSFNKITE---LDVSQNKLLNRLNCDTNNITKL---------------------- 206
Query: 475 FDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSL 534
L LT LD NK T EI D+ L QL Y D S N L ++ +L
Sbjct: 207 -------DLNQNIQLTFLDCSSNKLT-EI--DVTPLTQLTYFDCSVNPL-TELDV--STL 253
Query: 535 SNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSN 579
S L L + L + + L G + + + N
Sbjct: 254 SKLTTLHCIQTDLLE-IDLTH-NTQLIYFQAEGCRKIKELDVTHN 296
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 5e-32
Identities = 31/312 (9%), Positives = 74/312 (23%), Gaps = 56/312 (17%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHRE---FTAEMETLGKVKHQNLVPLL 741
+ G V+ + + A+K + E ++ ++
Sbjct: 69 PLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEAR 128
Query: 742 GYCSF--------------------------DEEKLLVYEYMV--NGSLDLWLRNRTGSL 773
LL+ L L
Sbjct: 129 DRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFR 188
Query: 774 EVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833
G + + R A L ++H N+ + + + D +
Sbjct: 189 GDEGILALHILTAQLIRLAANLQS---KGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVG 245
Query: 834 ACETHVSTDIAGTFGYIPPEYGQSGRS--TTRGDVYSFGVILLELVTGKEPTGPEFKDIE 891
+ Y P E+ + + T + + G+ + + P F +
Sbjct: 246 T----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP----FGLVT 297
Query: 892 GGNLVGWVFQKMKKGQAADVLDPTV--LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHV 949
G W ++ + + L K ++ + L + R L
Sbjct: 298 PGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNF-------DRRRRLLPLEA 350
Query: 950 LK--FLKEIKVE 959
++ +++ E
Sbjct: 351 METPEFLQLQNE 362
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 6e-32
Identities = 50/208 (24%), Positives = 80/208 (38%), Gaps = 32/208 (15%)
Query: 687 IGDGGFGTVYKA---ALPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQNLVPLLG 742
I GG G +Y A + +G+ V +K L + + AE + L +V H ++V +
Sbjct: 88 IAHGGLGWIYLALDRNV-NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFN 146
Query: 743 YCSFDEEKL-----LVYEYMVNG-SLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
+ + +V EY V G SL + L + L++LH
Sbjct: 147 FVEHTDRHGDPVGYIVMEY-VGGQSLKRSKGQK------LPVAEAIAYLLEILPALSYLH 199
Query: 797 -HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG 855
G +++ D+K NI+L EE + K+ D G I + GT G+ PE
Sbjct: 200 SIG----LVYNDLKPENIMLTEE-QLKLIDLGAVSRI----NSFGY-LYGTPGFQAPE-- 247
Query: 856 Q-SGRSTTRGDVYSFGVILLELVTGKEP 882
T D+Y+ G L L
Sbjct: 248 IVRTGPTVATDIYTVGRTLAALTLDLPT 275
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 7e-32
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 687 IGDGGFGTVYKAALPD---GKTVAVK--KLSQAKTQGHRE-FTAEMETLGKVKHQNLVPL 740
+G GG TVY A D VA+K + + + + F E+ ++ HQN+V +
Sbjct: 19 LGGGGMSTVYLAE--DTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT 800
+ D+ LV EY + G L S L D G+ H
Sbjct: 77 IDVDEEDDCYYLVMEY-IEGPT---LSEYIESHGPLSVDTAINFTNQILDGIKHAHDM-- 130
Query: 801 PHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD-IAGTFGYIPPEYGQSGR 859
I+HRDIK NIL++ K+ DFG+A+ +S + T+ + GT Y PE +
Sbjct: 131 -RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE-TSLTQTNHVLGTVQYFSPEQAKGEA 188
Query: 860 STTRGDVYSFGVILLELVTGKEP 882
+ D+YS G++L E++ G+ P
Sbjct: 189 TDECTDIYSIGIVLYEMLVGEPP 211
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 1e-31
Identities = 61/286 (21%), Positives = 116/286 (40%), Gaps = 41/286 (14%)
Query: 680 NFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLV 738
+FC +++G G GT+ + D + VAVK++ E++ L + +H N++
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADR---EVQLLRESDEHPNVI 81
Query: 739 PLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
+C+ D + + E +L ++ + + L + + GLA LH
Sbjct: 82 RY--FCTEKDRQFQYIAIEL-CAATLQEYVEQKDFAHLGL---EPITLLQQTTSGLAHLH 135
Query: 797 -HGFTPHIIHRDIKASNILLNEEFE-----AKVADFGLARLISA--CETHVSTDIAGTFG 848
I+HRD+K NIL++ A ++DFGL + ++ + + GT G
Sbjct: 136 SLN----IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEG 191
Query: 849 YIPPEY---GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK 905
+I PE T D++S G + +++ P F G +L +
Sbjct: 192 WIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSH--P-F----GKSLQRQANILLGA 244
Query: 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+ ++ ++ KM+ + +P RP+ HVLK
Sbjct: 245 CSLDCLHPEKHEDVIARELIEKMIAM-------DPQKRPSAKHVLK 283
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 3e-31
Identities = 77/286 (26%), Positives = 125/286 (43%), Gaps = 47/286 (16%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHR---EFTAEMETLGKVKH 734
+F N++G G F VY+A ++ G VA+K + + E++ ++KH
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 735 QNLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSL-EVLGWDKRYKIACGAARG 791
+++ L Y F D + LV E NG ++ +L+NR E ++I G
Sbjct: 71 PSILELYNY--FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITG---- 124
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
+ +LH + I+HRD+ SN+LL K+ADFGLA + T + GT YI
Sbjct: 125 MLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYIS 180
Query: 852 PE------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK 905
PE +G DV+S G + L+ G+ P F N K+
Sbjct: 181 PEIATRSAHGLE------SDVWSLGCMFYTLLIGRPP----FDTDTVKNT----LNKVVL 226
Query: 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
D P+ L+ ++K ++ ++LR NPA R ++ VL
Sbjct: 227 A---DYEMPSFLSIEAKDLIHQLLRR-------NPADRLSLSSVLD 262
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 4e-31
Identities = 87/475 (18%), Positives = 147/475 (30%), Gaps = 120/475 (25%)
Query: 91 SLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYL-SKLP-LMVLDLDSNN 148
+ +DL N + E F + +L L + + I L L++L LD N
Sbjct: 31 HVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQ 90
Query: 149 FTGIIPVSIWNSETLMEFSAANNLLEGSLPYEV-GNAAALERLVLTNNMLKGHLPKEIGN 207
F L A LE L LT L G
Sbjct: 91 FL-------------------------QLETGAFNGLANLEVLTLTQCNLDG-------- 117
Query: 208 LSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIAD-LAQLQCLVLSH 266
L+ N F + SL L L +NN+ + P + + L L+
Sbjct: 118 ------AVLSGNFFKPL--------TSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTF 163
Query: 267 NNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNN 326
N + S + LS L +N
Sbjct: 164 N----KVKSICEEDLLNFQGKHFTL------LRLSSITLQD----------------MNE 197
Query: 327 NMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLY-------------LG 373
L + G+ + T++TTLDLS N + F D+I + G
Sbjct: 198 YWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFG 257
Query: 374 NNQLTGSIPWSLGSLG--GLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPS 431
+ ++ L G+ +L+ +K+ + + F + +L L L+ NE++ +
Sbjct: 258 HTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDN 317
Query: 432 SLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTN 491
+ + +L+ L L N L ++ + +F+ L L
Sbjct: 318 AFWGLTHLLKLNLSQNFLG------------------SIDSRMFEN--------LDKLEV 351
Query: 492 LDLHENKFTGEIPPDL-GNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAEN 545
LDL N + L L+ L + N+L L++L + L N
Sbjct: 352 LDLSYNHIR-ALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 405
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 1e-29
Identities = 85/454 (18%), Positives = 141/454 (31%), Gaps = 104/454 (22%)
Query: 139 LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEV-GNAAALERLVLTNNML 197
+ +DL N+ + S + L + ++L L L N
Sbjct: 32 VNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQF 91
Query: 198 KGHLPKEI-GNLSALSVLDLNSN-LFDGIIPYELGDCI-SLTTLDLGNNNLSGLIPEKIA 254
L L+ L VL L L ++ + SL L L +NN+ + P
Sbjct: 92 L-QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFF 150
Query: 255 D-LAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEEL 313
+ + L L+ N + S + LS L
Sbjct: 151 LNMRRFHVLDLTFN----KVKSICEEDLLNFQGKHFTL------LRLSSITLQD------ 194
Query: 314 GSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLG 373
+N L + G+ + T++TTLDL
Sbjct: 195 ----------MNEYWLGWEKCGNPFKNTSITTLDL------------------------S 220
Query: 374 NNQLTGSIPWSLGSLGGLVKL-------------NLTGNKLSGKVPTSFGNLK--ELTHL 418
N S+ K+ + +F L+ +
Sbjct: 221 GNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTC 280
Query: 419 DLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGG 478
DLS +++ L S S+ +L L L N+++ + +N F G
Sbjct: 281 DLSKSKIFALLKSVFSHFTDLEQLTLAQNEIN------------------KIDDNAFWG- 321
Query: 479 LPRSLGNLSYLTNLDLHENKFTGEIPPDL-GNLMQLEYLDVSRNRLCGQIPETMCS-LSN 536
L++L L+L +N I + NL +LE LD+S N + + + L N
Sbjct: 322 -------LTHLLKLNLSQNFLG-SIDSRMFENLDKLEVLDLSYNHI-RALGDQSFLGLPN 372
Query: 537 LLYLSLAENRLEGMVPRSGIC--QNLSKISLTGN 568
L L+L N+L+ VP +L KI L N
Sbjct: 373 LKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTN 405
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 6e-28
Identities = 80/402 (19%), Positives = 137/402 (34%), Gaps = 58/402 (14%)
Query: 33 SLPSWLGNWNQMESLLLSSNQFIGKIPPE-IGNCSMLKSISLSNNFLSGSIPRELCTS-E 90
LP+ + + LS N I ++ L+ + + I
Sbjct: 27 ELPAHV------NYVDLSLNS-IAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLS 79
Query: 91 SLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSI--PEYLSKLP-LMVLDLDSN 147
SL + LD N G F +NL L + + ++ G++ + L L +L L N
Sbjct: 80 SLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDN 139
Query: 148 NFTGIIPVSIWNSET-LMEFSAANNLLEGSLPYEV---GNAAALERLVLTNNMLKGHLPK 203
N I P S + + N ++ S+ E L L++ L+
Sbjct: 140 NIKKIQPASFFLNMRRFHVLDLTFNKVK-SICEEDLLNFQGKHFTLLRLSSITLQDMNEY 198
Query: 204 EIG--------NLSALSVLDLNSNLFDGIIPYELGDCISLTTL-------------DLGN 242
+G ++++ LDL+ N F + D I+ T + G+
Sbjct: 199 WLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGH 258
Query: 243 NNLSGLIPEKIADL--AQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDL 300
N L + ++ LS + + + S F + DL + L
Sbjct: 259 TNFKDPDNFTFKGLEASGVKTCDLSKSKIF----ALLKSVFS--HFTDLEQL------TL 306
Query: 301 SYNRLSGPIPEE-LGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPS 359
+ N ++ I + ++ L L+ N L L L LDLS N + +
Sbjct: 307 AQNEIN-KIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA-LGD 364
Query: 360 E-FGDSIKLQGLYLGNNQLTGSIPWS-LGSLGGLVKLNLTGN 399
+ F L+ L L NQL S+P L L K+ L N
Sbjct: 365 QSFLGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTN 405
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 4e-23
Identities = 53/279 (18%), Positives = 92/279 (32%), Gaps = 34/279 (12%)
Query: 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSE-FGDSIKLQGLYLGNNQLTGS 380
+ L+ N ++ S SRL +L L + + I + F L L L NQ
Sbjct: 35 VDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFL-Q 93
Query: 381 IP-WSLGSLGGLVKLNLTGNKLSGKV--PTSFGNLKELTHLDLSFNELDGQLPSSL-SNI 436
+ + L L L LT L G V F L L L L N + P+S N+
Sbjct: 94 LETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNM 153
Query: 437 LNLVGLYLQHNKLSGPVDELFSNSAAWKIATMN--------MSNNLFDGGLPRSLGNLSY 488
L L NK+ +E N + M+ + +
Sbjct: 154 RRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTS 213
Query: 489 LTNLDLHENKFTGEIPP---DLGNLMQLEYLDVSRNRLCGQ---------IPETMC---S 533
+T LDL N F + D +++ L +S + G
Sbjct: 214 ITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLE 273
Query: 534 LSNLLYLSLAENRLEGMVPRSGICQNLSK---ISLTGNK 569
S + L+++++ + + + + ++L N+
Sbjct: 274 ASGVKTCDLSKSKIF-ALL-KSVFSHFTDLEQLTLAQNE 310
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 1e-13
Identities = 61/306 (19%), Positives = 99/306 (32%), Gaps = 44/306 (14%)
Query: 2 LSFNALSGSLPEE----LSDLPILTFAAEKNQL-SGSLPS-WLGNWNQMESLLLSSNQFI 55
L +N L L++L +LT L L + +E L+L N I
Sbjct: 86 LDYNQFL-QLETGAFNGLANLEVLTLTQ--CNLDGAVLSGNFFKPLTSLEMLVLRDNN-I 141
Query: 56 GKIPPEIGNCSM--LKSISLSNNFLSGSIPREL---CTSESLEEIDLDGNLLT------- 103
KI P +M + L+ N + SI E + + L L
Sbjct: 142 KKIQPASFFLNMRRFHVLDLTFNKVK-SICEEDLLNFQGKHFTLLRLSSITLQDMNEYWL 200
Query: 104 -GTIEGVFEKCSNLSQLVIFRNHIYGSIPE--------------YLSKLPLMVLDLDSNN 148
G K ++++ L + N S+ + LS M N
Sbjct: 201 GWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTN 260
Query: 149 FTGIIPVSIWNSET--LMEFSAANNLLEGSLPYEV-GNAAALERLVLTNNMLKGHLPKEI 205
F + E + + + + +L V + LE+L L N + +
Sbjct: 261 FKDPDNFTFKGLEASGVKTCDLSKSKIF-ALLKSVFSHFTDLEQLTLAQNEIN-KIDDNA 318
Query: 206 -GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVL 264
L+ L L+L+ N I + L LDL N++ L + L L+ L L
Sbjct: 319 FWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELAL 378
Query: 265 SHNNLS 270
N L
Sbjct: 379 DTNQLK 384
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 7e-31
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 687 IGDGGFGTVYKAALPD---GKTVAVK--KLSQAKTQGHRE-FTAEMETLGKVKHQNLVPL 740
+G GG V+ A D + VAVK + A+ F E + + H +V +
Sbjct: 20 LGFGGMSEVHLAR--DLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 741 LGYCSFDEEKL----LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
+ +V EY V+G LR+ + + + ++ A + L F H
Sbjct: 78 YDTGEAETPAGPLPYIVMEY-VDGVT---LRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV--STDIAGTFGYIPPEY 854
IIHRD+K +NI+++ KV DFG+AR I+ V + + GT Y+ PE
Sbjct: 134 QN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 855 GQSGRSTTRGDVYSFGVILLELVTGKEP 882
+ R DVYS G +L E++TG+ P
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPP 218
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 1e-30
Identities = 68/314 (21%), Positives = 107/314 (34%), Gaps = 62/314 (19%)
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293
T LDL NN++S L + L L LVL +N +S I K F + + L
Sbjct: 55 DTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISK-IHEKA---F--SPLRKLQ--- 105
Query: 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQL 353
+S N L IP L S +V L +++N + G S L N+ +++ N L
Sbjct: 106 ---KLYISKNHLVE-IPPNLPSSLVE--LRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPL 159
Query: 354 T-GPIPSEFGDSIKLQGLYLGNNQLTGSIPW----------------------SLGSLGG 390
D +KL L + +LT IP L
Sbjct: 160 ENSGFEPGAFDGLKLNYLRISEAKLT-GIPKDLPETLNELHLDHNKIQAIELEDLLRYSK 218
Query: 391 LVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLS 450
L +L L N++ S L L L L N+L ++P+ L ++ L +YL N ++
Sbjct: 219 LYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT 277
Query: 451 GPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFT-GEIPPDL-G 508
+ N F +Y + L N E+ P
Sbjct: 278 ------------------KVGVNDFCP--VGFGVKRAYYNGISLFNNPVPYWEVQPATFR 317
Query: 509 NLMQLEYLDVSRNR 522
+ + +
Sbjct: 318 CVTDRLAIQFGNYK 331
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 3e-24
Identities = 65/330 (19%), Positives = 110/330 (33%), Gaps = 43/330 (13%)
Query: 51 SNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRE-LCTSESLEEIDLDGNLLTGTIEGV 109
S+ + +P EI + L NN +S + ++ + L + L N ++ E
Sbjct: 41 SDLGLKAVPKEIS--PDTTLLDLQNNDIS-ELRKDDFKGLQHLYALVLVNNKISKIHEKA 97
Query: 110 FEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAA 169
F L +L I +NH+ IP L L+ L + N + +
Sbjct: 98 FSPLRKLQKLYISKNHLV-EIPPNLPS-SLVELRIHDNRIRKVPKGVFSGLRNMNCIEMG 155
Query: 170 NNLL-EGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYE 228
N L + L L ++ L +PK L+ L L+ N I +
Sbjct: 156 GNPLENSGFEPGAFDGLKLNYLRISEAKLT-GIPK--DLPETLNELHLDHNKIQAIELED 212
Query: 229 LGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPD 288
L L L LG+N + + ++ L L+ L L +N LS +P A +PD
Sbjct: 213 LLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSR-VP---------AGLPD 262
Query: 289 LSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDL 348
L +Q L N ++ + N G + + L
Sbjct: 263 LKLLQV---VYLHTNNITK----------------VGVNDFCP--VGFGVKRAYYNGISL 301
Query: 349 SRNQLTGPI--PSEFGDSIKLQGLYLGNNQ 376
N + P+ F + GN +
Sbjct: 302 FNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 3e-12
Identities = 46/231 (19%), Positives = 78/231 (33%), Gaps = 22/231 (9%)
Query: 2 LSFNALSGSLPEEL-SDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQF-IGKIP 59
+S N L +P L S L L N++ M + + N
Sbjct: 109 ISKNHLV-EIPPNLPSSLVELRIHD--NRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFE 165
Query: 60 PEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQL 119
P + L + +S L+ IP++L +L E+ LD N + + S L +L
Sbjct: 166 PGAFDGLKLNYLRISEAKLT-GIPKDLPE--TLNELHLDHNKIQAIELEDLLRYSKLYRL 222
Query: 120 VIFRNHIYGSIPEY-LSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSL 177
+ N I I LS LP L L LD+N + +P + + + L N + +
Sbjct: 223 GLGHNQI-RMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT-KV 279
Query: 178 PYEV-------GNAAALERLVLTNNMLKGHL--PKEIGNLSALSVLDLNSN 219
A + L NN + P ++ + +
Sbjct: 280 GVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 4e-05
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 487 SYLTNLDLHENKFTGEIPPD-LGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAEN 545
T LDL N + E+ D L L L + N++ + L L L +++N
Sbjct: 54 PDTTLLDLQNNDIS-ELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112
Query: 546 RLEGMVPRSGICQNLSKISLTGNK 569
L + P + +L ++ + N+
Sbjct: 113 HLVEIPP--NLPSSLVELRIHDNR 134
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 2e-30
Identities = 74/286 (25%), Positives = 127/286 (44%), Gaps = 36/286 (12%)
Query: 683 KTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLL 741
++G G +G VY L + +A+K++ + ++ + E+ +KH+N+V L
Sbjct: 26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYL 85
Query: 742 GYCSFDEEKLLVY-EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA---RGLAFLHH 797
G + + ++ E + GSL LR++ G L+ D I GL +LH
Sbjct: 86 G-SFSENGFIKIFMEQVPGGSLSALLRSKWGPLK----DNEQTIGFYTKQILEGLKYLHD 140
Query: 798 GFTPHIIHRDIKASNILLNEEF-EAKVADFGLARLISACETHVSTDIAGTFGYIPPE--- 853
I+HRDIK N+L+N K++DFG ++ ++ T GT Y+ PE
Sbjct: 141 N---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIID 196
Query: 854 YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913
G G D++S G ++E+ TGK P F ++ G +F K+ + +
Sbjct: 197 KGPRGYG-KAADIWSLGCTIIEMATGKPP----FYEL--GEPQAAMF-KVGMFKVHPEI- 247
Query: 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKEIK 957
P ++A++K +LK C +P R +L FLK
Sbjct: 248 PESMSAEAKAFILK-------CFEPDPDKRACANDLLVDEFLKVSS 286
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 3e-30
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKL-SQAKTQGHREFTAEMETLGK-VKHQNLVPLLGY 743
+G G +G V K +P G+ +AVK++ + +Q + +++ + V V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG- 73
Query: 744 CSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH 802
F E + + E M + SLD + + + + D KIA + L LH
Sbjct: 74 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLS 130
Query: 803 IIHRDIKASNILLNEEFEAKVADFGL-ARLIS--ACETHVSTDIAGTFGYIPPE----YG 855
+IHRD+K SN+L+N + K+ DFG+ L+ A + G Y+ PE
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA-----GCKPYMAPERINPEL 185
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEP 882
+ + D++S G+ ++EL + P
Sbjct: 186 NQKGYSVKSDIWSLGITMIELAILRFP 212
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 3e-30
Identities = 67/361 (18%), Positives = 119/361 (32%), Gaps = 78/361 (21%)
Query: 201 LPKEIGNLSALSVLDLNSNLFDGIIPYELGDCIS----LTTLDLGNNNLSGLIPEKIADL 256
+ I N +LS + + + N L+ E +
Sbjct: 3 IMLPINNNFSLSQNSFYNTISG--TYADYFSAWDKWEKQALPGENRNEAVSLLKE--CLI 58
Query: 257 AQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSC 316
Q L L+ NLS +P + V +++ N L +PE S
Sbjct: 59 NQFSELQLNRLNLSS-LPD--------------NLPPQITVLEITQNALI-SLPELPAS- 101
Query: 317 VVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQ 376
+ L +N LS +P + +L LD+ NQLT +P L+ + NNQ
Sbjct: 102 --LEYLDACDNRLS-TLPELPA---SLKHLDVDNNQLTM-LPELPA---LLEYINADNNQ 151
Query: 377 LTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNI 436
LT +P SL L++ N+L+ +P +L+ L D+S N L+ LP+
Sbjct: 152 LT-MLPELPTSL---EVLSVRNNQLT-FLPELPESLEAL---DVSTNLLE-SLPAVPVRN 202
Query: 437 LNL----VGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNL 492
+ + + N+++ +P ++ +L +
Sbjct: 203 HHSEETEIFFRCRENRITH---------------------------IPENILSLDPTCTI 235
Query: 493 DLHENKFTGEIPPDLGNLMQLEYLDVSRNRL---CGQIPETMCSLSNLLYLSLAENRLEG 549
L +N + I L R GQ L++ + EN+
Sbjct: 236 ILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQNTLHRPLADAVTAWFPENKQSD 295
Query: 550 M 550
+
Sbjct: 296 V 296
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 5e-24
Identities = 70/349 (20%), Positives = 116/349 (33%), Gaps = 86/349 (24%)
Query: 14 ELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSM--LKSI 71
L +F N +SG+ + W++ E L + + C + +
Sbjct: 9 NNFSLSQNSFY---NTISGTYADYFSAWDKWEKQALPGEN-RNEAVSLLKECLINQFSEL 64
Query: 72 SLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIP 131
L+ LS S+P L + +++ N L S+P
Sbjct: 65 QLNRLNLS-SLPDNLPP--QITVLEITQNALI-------------------------SLP 96
Query: 132 EYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLV 191
E + L LD N + +LP + L+ L
Sbjct: 97 ELPASLE--YLDACDNRLS-------------------------TLPELPAS---LKHLD 126
Query: 192 LTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPE 251
+ NN L LP+ L ++ ++N +P SL L + NN L+ L PE
Sbjct: 127 VDNNQLT-MLPELPAL---LEYINADNNQLTM-LPELPT---SLEVLSVRNNQLTFL-PE 177
Query: 252 KIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPE 311
L+ L +S N L S P+ R + + F NR++ IPE
Sbjct: 178 L---PESLEALDVSTNLLE----SLPAVPVRNHHSEETEIF-----FRCRENRITH-IPE 224
Query: 312 ELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSE 360
+ S ++L +N LS +I SLS+ T R + +
Sbjct: 225 NILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQ 273
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 5e-23
Identities = 48/267 (17%), Positives = 84/267 (31%), Gaps = 72/267 (26%)
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIP 358
+ YN +SG + S + +RN+ +
Sbjct: 16 NSFYNTISG-TYADYFSA--------------------WDKWEKQALPGENRNEAVSLLK 54
Query: 359 SEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHL 418
+ L L L+ S+P +L + L +T N L +P +L +L
Sbjct: 55 ECLINQ--FSELQLNRLNLS-SLPDNLPP--QITVLEITQNALI-SLPELPASL---EYL 105
Query: 419 DLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGG 478
D N L LP ++ L L + +N+L+
Sbjct: 106 DACDNRLS-TLPELPAS---LKHLDVDNNQLTM--------------------------- 134
Query: 479 LPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLL 538
LP L ++ N+ T +P +L E L V N+L +PE +L
Sbjct: 135 LPELPALL---EYINADNNQLT-MLPELPTSL---EVLSVRNNQL-TFLPE---LPESLE 183
Query: 539 YLSLAENRLEGMVPRSGICQNLSKISL 565
L ++ N LE + + + +
Sbjct: 184 ALDVSTNLLESLPAVPVRNHHSEETEI 210
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 96.2 bits (239), Expect = 1e-20
Identities = 70/382 (18%), Positives = 117/382 (30%), Gaps = 50/382 (13%)
Query: 2 LSFNALSGSLPE-ELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
+ N L E ++ L + LS SLP L Q+ L ++ N + +P
Sbjct: 44 ENRNEAVSLLKECLINQFSELQLN--RLNLS-SLPDNLPP--QITVLEITQNA-LISLPE 97
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
+ L+ + +N LS ++P SL+ +D+D N LT E + L +
Sbjct: 98 LPAS---LEYLDACDNRLS-TLPELPA---SLKHLDVDNNQLTMLPELP----ALLEYIN 146
Query: 121 IFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180
N + +PE + L VL + +N T + P + L + NLLE SLP
Sbjct: 147 ADNNQL-TMLPELPTSL--EVLSVRNNQLTFL-PELPES---LEALDVSTNLLE-SLPAV 198
Query: 181 VGNAAALER----LVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLT 236
E N + H+P+ I +L + L N I L +
Sbjct: 199 PVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQP 257
Query: 237 TLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHG 296
S ++ + S +H
Sbjct: 258 DYHGPRIYFSMSDGQQ--NTLHRPLADAVTAWFPENKQS-----DVSQIWHAFEHEEHAN 310
Query: 297 VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGP 356
F +RLS + N + ++ L +L+ L +
Sbjct: 311 TFSAFLDRLSDTVS------------ARNTSGFREQVAAWLEKLSASAELRQQSFAVAAD 358
Query: 357 IPSEFGDSIKLQGLYLGNNQLT 378
D + L L L
Sbjct: 359 ATESCEDRVALTWNNLRKTLLV 380
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 121 bits (304), Expect = 4e-30
Identities = 56/253 (22%), Positives = 97/253 (38%), Gaps = 32/253 (12%)
Query: 679 NNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQN 736
+ + ++I+G G V++ G A+K + + E E L K+ H+N
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68
Query: 737 LVPLLGYCSFDEEK----LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGL 792
+V L + +E +L+ E+ GSL L + L + + G+
Sbjct: 69 IVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEP-SNAYGLPESEFLIVLRDVVGGM 125
Query: 793 AFLH-HGFTPHIIHRDIKASNILLNEEFEA----KVADFGLARLISACETHVSTDIAGTF 847
L +G I+HR+IK NI+ + K+ DFG AR + + + GT
Sbjct: 126 NHLRENG----IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE--DDEQFVSLYGTE 179
Query: 848 GYIPPEYGQSGRSTTRG--------DVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWV 899
Y+ P+ + D++S GV TG P F+ EG V
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP----FRPFEGPRRNKEV 235
Query: 900 FQKMKKGQAADVL 912
K+ G+ + +
Sbjct: 236 MYKIITGKPSGAI 248
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 4e-30
Identities = 53/307 (17%), Positives = 114/307 (37%), Gaps = 56/307 (18%)
Query: 678 TNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKK--LSQAKTQGHREFTAEMETLGKV-K 733
T F + IG G FG+V+K DG A+K+ A + + E+ + +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 734 HQNLVPLLGYCSFDEEKLLVY-EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGL 792
H ++V +++ +L+ EY GSL + + + + RGL
Sbjct: 70 HSHVVRYFS-AWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEE-------------------FEAKVADFGLARLIS 833
++H ++H DIK SNI ++ K+ D G IS
Sbjct: 129 RYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 185
Query: 834 ACETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEG 892
+ + G ++ E Q + + D+++ + ++ + ++ +
Sbjct: 186 SPQVEE-----GDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPL----PRNGDQ 236
Query: 893 GNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK- 951
+ ++++G+ + P VL+ + ++ M+ +P RP+ + ++K
Sbjct: 237 -------WHEIRQGRLPRI--PQVLSQEFTELLKVMIHP-------DPERRPSAMALVKH 280
Query: 952 -FLKEIK 957
L
Sbjct: 281 SVLLSAS 287
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 7e-30
Identities = 67/280 (23%), Positives = 114/280 (40%), Gaps = 38/280 (13%)
Query: 680 NFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHR---EFTAEMETLGKVKHQ 735
+ + +G GGF ++ + + A K + ++ + + E+ + HQ
Sbjct: 42 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 101
Query: 736 NLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL 795
++V G+ ++ +V E SL + R E + RY + G +L
Sbjct: 102 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTE---PEARYYLR-QIVLGCQYL 157
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY- 854
H +IHRD+K N+ LNE+ E K+ DFGLA + + GT YI PE
Sbjct: 158 HR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVL 213
Query: 855 ---GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911
G S DV+S G I+ L+ GK P F+ + ++KK +
Sbjct: 214 SKKGHSFEV----DVWSIGCIMYTLLVGKPP----FETSCLKET----YLRIKKN---EY 258
Query: 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
P + + ++ KML+ +P RPT+ +L
Sbjct: 259 SIPKHINPVAASLIQKMLQT-------DPTARPTINELLN 291
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 7e-30
Identities = 76/302 (25%), Positives = 119/302 (39%), Gaps = 49/302 (16%)
Query: 679 NNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKL-SQAKTQGHREFTAEMETLGK-VKHQ 735
+ IG G +G+V K P G+ +AVK++ S + ++ +++ + +
Sbjct: 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCP 81
Query: 736 NLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSL------EVLGWDKRYKIACG 787
+V Y + E + E M + S D + + L E+LG KI
Sbjct: 82 YIVQF--YGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILG-----KITLA 133
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC--ETHVSTDIAG 845
+ L L IIHRDIK SNILL+ K+ DFG IS ++ T AG
Sbjct: 134 TVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFG----ISGQLVDSIAKTRDAG 187
Query: 846 TFGYIPPEYGQSGRS----TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901
Y+ PE S R DV+S G+ L EL TG+ P + V
Sbjct: 188 CRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP----YPKWNS---VFDQLT 240
Query: 902 KMKKGQAADVLDPTVLTADSKPMMLKMLR--IAGDCLSDNPAMRPTMLHVLK--FLKEIK 957
++ KG DP L+ + + CL+ + + RP +LK F+ +
Sbjct: 241 QVVKG------DPPQLSNSEEREFSPSFINFVN-LCLTKDESKRPKYKELLKHPFILMYE 293
Query: 958 VE 959
Sbjct: 294 ER 295
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 7e-30
Identities = 67/281 (23%), Positives = 116/281 (41%), Gaps = 40/281 (14%)
Query: 680 NFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHR---EFTAEMETLGKVKHQ 735
+ + +G GGF ++ + + A K + ++ + + E+ + HQ
Sbjct: 16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 75
Query: 736 NLVPLLGYCSFDEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAARGLAF 794
++V G+ ++ +V E SL +L R + + + RY + G +
Sbjct: 76 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP----EARYYLR-QIVLGCQY 130
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE- 853
LH +IHRD+K N+ LNE+ E K+ DFGLA + + GT YI PE
Sbjct: 131 LHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEV 186
Query: 854 ---YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910
G S DV+S G I+ L+ GK P F+ + ++KK +
Sbjct: 187 LSKKGHSFEV----DVWSIGCIMYTLLVGKPP----FETSCLKET----YLRIKKN---E 231
Query: 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
P + + ++ KML+ +P RPT+ +L
Sbjct: 232 YSIPKHINPVAASLIQKMLQT-------DPTARPTINELLN 265
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 1e-29
Identities = 72/304 (23%), Positives = 120/304 (39%), Gaps = 54/304 (17%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNL 737
N I+G G GTV G+ VAVK++ E++ L + H N+
Sbjct: 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCD---IALMEIKLLTESDDHPNV 71
Query: 738 VPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIAC---GAARGL 792
+ YCS + L + E N +L + ++ S E L K Y A G+
Sbjct: 72 IRY--YCSETTDRFLYIALEL-CNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 793 AFLH-HGFTPHIIHRDIKASNILL-------------NEEFEAKVADFGLARLISACETH 838
A LH IIHRD+K NIL+ E ++DFGL + + + ++
Sbjct: 129 AHLHSLK----IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184
Query: 839 VST---DIAGTFGYIPPE-------YGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEF 887
T + +GT G+ PE R T D++S G + +++ GK P G ++
Sbjct: 185 FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244
Query: 888 KDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTML 947
+ + + L L A++ ++ +M+ +P RPT +
Sbjct: 245 SRESN------IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDH-------DPLKRPTAM 291
Query: 948 HVLK 951
VL+
Sbjct: 292 KVLR 295
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 121 bits (304), Expect = 1e-29
Identities = 61/316 (19%), Positives = 109/316 (34%), Gaps = 53/316 (16%)
Query: 679 NNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQN 736
+ + ++I+G G V++ G A+K + + E E L K+ H+N
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68
Query: 737 LVPLLGYCSFDEE----KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGL 792
+V L + +E K+L+ E+ GSL L + L + + G+
Sbjct: 69 IVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEP-SNAYGLPESEFLIVLRDVVGGM 125
Query: 793 AFLH-HGFTPHIIHRDIKASNILLNEEFEA----KVADFGLARLISACETHVSTDIAGTF 847
L +G I+HR+IK NI+ + K+ DFG AR + + + GT
Sbjct: 126 NHLRENG----IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE--DDEQFVSLYGTE 179
Query: 848 GYIPPEYGQSGRSTTRG--------DVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWV 899
Y+ P+ + D++S GV TG P F+ EG V
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP----FRPFEGPRRNKEV 235
Query: 900 FQKMKKGQAADVL------------------DPTVLTADSKPMMLKMLRIAGDCLSDNPA 941
K+ G+ + + L+ + ++ +L L +
Sbjct: 236 MYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLAN---ILEADQE 292
Query: 942 MRPTMLHVLKFLKEIK 957
+I
Sbjct: 293 KCWGFDQFFAETSDIL 308
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 2e-29
Identities = 92/539 (17%), Positives = 167/539 (30%), Gaps = 96/539 (17%)
Query: 65 CSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRN 124
+ + SN L+ +P++L + + L N ++ S L L + N
Sbjct: 30 NELESMVDYSNRNLT-HVPKDLPPR--TKALSLSQNSISELRMPDISFLSELRVLRLSHN 86
Query: 125 HIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNA 184
+ L V
Sbjct: 87 R--------IRSLDFHVFL--------------------------------FNQ------ 100
Query: 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGI-IPYELGDCISLTTLDLGNN 243
LE L +++N L+ ++ +++L LDL+ N FD + + E G+ LT L L
Sbjct: 101 -DLEYLDVSHNRLQ-NIS--CCPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAA 156
Query: 244 NLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHH-------- 295
L +A L L C++L + +S I + + N L + H
Sbjct: 157 KFRQLDLLPVAHL-HLSCILL--DLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQV 213
Query: 296 ----------GVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPG-------SLS 338
+ ++ N + S + LLN + +
Sbjct: 214 NMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFF 273
Query: 339 RLTNLTTLDLSRNQLTGPIPSEFGDSIK-----LQGLYLGNNQLTGSIPWSLGSLGGLVK 393
+ L++ +T I E + L ++ N S +
Sbjct: 274 WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNI 333
Query: 394 LNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPV 453
L+ + + T L+ + N + S + L L LQ N L
Sbjct: 334 KMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKN-F 392
Query: 454 DELFSNSAAWKIATM--NMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLM 511
++ + N+L R+ + L+L N TG + L
Sbjct: 393 FKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCL--PP 450
Query: 512 QLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGI--CQNLSKISLTGN 568
+++ LD+ NR+ IP+ + L L L++A N+L+ VP +L I L N
Sbjct: 451 KVKVLDLHNNRI-MSIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 3e-29
Identities = 96/505 (19%), Positives = 174/505 (34%), Gaps = 60/505 (11%)
Query: 58 IPPEIGNCSMLKSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNLLTGTIEGVFEKCSNL 116
+P ++ K++SLS N +S + + L + L N + VF +L
Sbjct: 46 VPKDL--PPRTKALSLSQNSIS-ELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDL 102
Query: 117 SQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEF--SAANNLL 173
L + N + +I + L LDL N+F + + + T + F +A
Sbjct: 103 EYLDVSHNRL-QNIS--CCPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFR 159
Query: 174 EGSLPYEVGNAAALERLVLTNNMLKGHLPKEI--GNLSALSVLDLNSNLFDGIIPYELGD 231
+ L + L L + +KG + + N + L ++ ++LF + +
Sbjct: 160 QLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVN- 218
Query: 232 CISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSF 291
+L L L N L+ +++ + N++ + F
Sbjct: 219 --ALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVK----LFQF 272
Query: 292 IQHHGV--FDLSYNRLSGPIPEELG-----SCVVVVDLLLNNNMLSGKIPGSLSRLTNLT 344
V ++ ++ I E + ++ + N + S +
Sbjct: 273 FWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMN 332
Query: 345 TLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLS-- 402
LS + L N T S+ +L L L L N L
Sbjct: 333 IKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNF 392
Query: 403 GKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVGLYLQHNKLSGPVDELFSNSA 461
KV N+ L LD+S N L+ +++ L L N L+G V
Sbjct: 393 FKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV-------- 444
Query: 462 AWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRN 521
F LP + LDLH N+ IP D+ +L L+ L+V+ N
Sbjct: 445 -------------FR-CLPPK------VKVLDLHNNRIM-SIPKDVTHLQALQELNVASN 483
Query: 522 RLCGQIPETMC-SLSNLLYLSLAEN 545
+L +P+ + L++L Y+ L +N
Sbjct: 484 QLKS-VPDGVFDRLTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 1e-24
Identities = 77/471 (16%), Positives = 149/471 (31%), Gaps = 60/471 (12%)
Query: 47 LLLSSNQFIGKIPPEI-GNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTG- 104
L LS N+ I + + L+ + +S+N L +I S L +DL N
Sbjct: 81 LRLSHNR-IRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCCPMAS--LRHLDLSFNDFDVL 136
Query: 105 TIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPL--MVLDLDSNNFTGIIPVSIW--NS 160
+ F + L+ L + ++ L L ++LDL S + G S+ N+
Sbjct: 137 PVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNT 196
Query: 161 ETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEI-------GNLSALSV 213
L N+L + V L+ + N L +++
Sbjct: 197 TVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTL 256
Query: 214 LDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPI 273
+ + + ++ + L++ N ++ I + ++ L ++ +
Sbjct: 257 QHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQV 316
Query: 274 PSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKI 333
S + LS + S L N+ + +
Sbjct: 317 FLFSKEAL-------YSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSV 369
Query: 334 PGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLT----GSIPWSLGSLG 389
S L L TL L RN L + + L + L + +
Sbjct: 370 FQGCSTLKRLQTLILQRNGLKN-FFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAE 428
Query: 390 GLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKL 449
++ LNL+ N L+G V ++ LDL N + +P ++++ L L + N+L
Sbjct: 429 SILVLNLSSNMLTGSVFRCL--PPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQL 485
Query: 450 SGPVDELFSNSAAWKIATMNMSNNLFDGGLPR-SLGNLSYLTNLDLHENKF 499
+P L+ L + LH+N +
Sbjct: 486 KS---------------------------VPDGVFDRLTSLQYIWLHDNPW 509
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 88.4 bits (219), Expect = 3e-18
Identities = 56/372 (15%), Positives = 122/372 (32%), Gaps = 31/372 (8%)
Query: 213 VLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGP 272
L L+ N + ++ L L L +N + L L+ L +SHN L
Sbjct: 56 ALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQN- 114
Query: 273 IPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRL-SGPIPEELGSCVVVVDLLLNNNMLSG 331
I P ++ ++H DLS+N P+ +E G+ + L L+
Sbjct: 115 ISCCP-----------MASLRH---LDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160
Query: 332 KIPGSLSRL-TNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGG 390
++ L + LDL + G L+L + + S+
Sbjct: 161 LDLLPVAHLHLSCILLDLVSYHIKGGETESLQI-PNTTVLHLVFHPNSLFSVQVNMSVNA 219
Query: 391 LVKLNLTGNKLSGKVPTSFGNL-----KELTHLDLSFNELDGQLPSSLSNILNLVGLYLQ 445
L L L+ KL+ + + T L+++ ++ S+ ++
Sbjct: 220 LGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVE 279
Query: 446 H-----NKLSGPVDELFSNSAAWKIATM---NMSNNLFDGGLPRSLGNLSYLTNLDLHEN 497
+ ++ +D + + ++ ++ N +F + + L +
Sbjct: 280 YLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSIS 339
Query: 498 KFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGIC 557
+ +L+ ++N + + +L L L L N L+ + +
Sbjct: 340 DTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMT 399
Query: 558 QNLSKISLTGNK 569
+N+S +
Sbjct: 400 KNMSSLETLDVS 411
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 1e-08
Identities = 41/198 (20%), Positives = 79/198 (39%), Gaps = 14/198 (7%)
Query: 33 SLPSWLGNW-NQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSES 91
L + +M +LS + + S ++ + N + S+ + T +
Sbjct: 319 FSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKR 378
Query: 92 LEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIP----EYLSKLP--LMVLDLD 145
L+ + L N L V N+S L + S+ + ++VL+L
Sbjct: 379 LQTLILQRNGLK-NFFKVALMTKNMSSLETLDVSL-NSLNSHAYDRTCAWAESILVLNLS 436
Query: 146 SNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEI 205
SN TG + + + NN + S+P +V + AL+ L + +N LK +P +
Sbjct: 437 SNMLTGSVFRCL--PPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGV 492
Query: 206 -GNLSALSVLDLNSNLFD 222
L++L + L+ N +D
Sbjct: 493 FDRLTSLQYIWLHDNPWD 510
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 8e-07
Identities = 42/303 (13%), Positives = 99/303 (32%), Gaps = 40/303 (13%)
Query: 1 MLSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
+ +++ +LS++ + ++ + S L + ++ L + K
Sbjct: 211 VQVNMSVNALGHLQLSNIKLNDENCQRLM---TFLSELTRGPTLLNVTLQHIETTWKCSV 267
Query: 61 EIGNC---SMLKSISLSNNFLSGSIPRELCTS-----ESLEEIDLDGNLLTGTIEGVFEK 112
++ ++ +++ N ++ I RE T +SL + + + E ++
Sbjct: 268 KLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSV 327
Query: 113 CSNLSQLVIFRNHIYGSIPEYLSKLP--LMVLDLDSNNFTGIIPVSIWNSETLMEFSAAN 170
+ ++ ++ + I P L+ N FT + + L
Sbjct: 328 FAEMNIKMLSISDT-PFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQR 386
Query: 171 NLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNL----SALSVLDLNSN-----LF 221
N L+ + + L + L ++ VL+L+SN +F
Sbjct: 387 NGLK-NFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVF 445
Query: 222 DGI----------------IPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLS 265
+ IP ++ +L L++ +N L + L LQ + L
Sbjct: 446 RCLPPKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLH 505
Query: 266 HNN 268
N
Sbjct: 506 DNP 508
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 3e-29
Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 28/218 (12%)
Query: 679 NNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKL-SQAKTQGHREFTAEMETLGK-VKHQ 735
N+ +G G G V+K G +AVK++ + ++ +++ + K
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84
Query: 736 NLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSL--EVLGWDKRYKIACGAARG 791
+V + +F + + E M + + G + +LG K+ +
Sbjct: 85 YIVQC--FGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILG-----KMTVAIVKA 136
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC--ETHVSTDIAGTFGY 849
L +L +IHRD+K SNILL+E + K+ DFG IS + AG Y
Sbjct: 137 LYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFG----ISGRLVDDKAKDRSAGCAAY 190
Query: 850 IPPEYGQSGRS-----TTRGDVYSFGVILLELVTGKEP 882
+ PE R DV+S G+ L+EL TG+ P
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 4e-29
Identities = 64/314 (20%), Positives = 105/314 (33%), Gaps = 57/314 (18%)
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293
++ +LDL NN ++ + + LQ LVL+ N ++ I
Sbjct: 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINT-IEE------------------ 93
Query: 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQL 353
F LGS + L L+ N LS L++LT L+L N
Sbjct: 94 --DSFS------------SLGS---LEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPY 136
Query: 354 TG-PIPSEFGDSIKLQGLYLGNNQLTGSIPW-SLGSLGGLVKLNLTGNKLSGKVPTSFGN 411
S F KLQ L +GN I L L +L + + L P S +
Sbjct: 137 KTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKS 196
Query: 412 LKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMS 471
++ ++HL L + L + ++ L L+ L
Sbjct: 197 IQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLD------------------TFH 238
Query: 472 NNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETM 531
+ G SL N+ + + ++ L + L L+ SRN+L
Sbjct: 239 FSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELEFSRNQLKSVPDGIF 297
Query: 532 CSLSNLLYLSLAEN 545
L++L + L N
Sbjct: 298 DRLTSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 2e-24
Identities = 58/303 (19%), Positives = 107/303 (35%), Gaps = 51/303 (16%)
Query: 209 SALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNN 268
A+ LDL++N I +L C++L L L +N ++ + + + L L+ L LS+N
Sbjct: 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNY 111
Query: 269 LSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVV--VVDLLLNN 326
LS + SS+F+ + L+F+ +L N L S + + + N
Sbjct: 112 LS----NLSSSWFK--PLSSLTFL------NLLGNPYKTLGETSLFSHLTKLQILRVGNM 159
Query: 327 NMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIP-WSL 385
+ + + LT L L++ + L P + L L Q + +
Sbjct: 160 DTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFV 218
Query: 386 GSLGGLVKLNLTGNKLSGK--------VPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL 437
+ L L L S ++ ++ L Q+ L+ I
Sbjct: 219 DVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESL-FQVMKLLNQIS 277
Query: 438 NLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHEN 497
L+ L N+L ++ + +FD L+ L + LH N
Sbjct: 278 GLLELEFSRNQLK------------------SVPDGIFD--------RLTSLQKIWLHTN 311
Query: 498 KFT 500
+
Sbjct: 312 PWD 314
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 99.0 bits (247), Expect = 2e-22
Identities = 64/341 (18%), Positives = 123/341 (36%), Gaps = 43/341 (12%)
Query: 47 LLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTI 106
++ S +C S+ L+ SIP L + ++ +DL N +T
Sbjct: 12 GVIISLSKEESSNQASLSCDRNGICKGSSGSLN-SIPSGLTEA--VKSLDLSNNRITYIS 68
Query: 107 EGVFEKCSNLSQLVIFRNHIYGSIPEYL-SKLP-LMVLDLDSNNFTGIIPVSIWNSETLM 164
++C NL LV+ N I +I E S L L LDL N + + +L
Sbjct: 69 NSDLQRCVNLQALVLTSNGI-NTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLT 127
Query: 165 EFSAANNLLEGSLPYEV-GNAAALERLVLTNNMLKGHLPKEI-GNLSALSVLDLNSNLFD 222
+ N + + + L+ L + N + ++ L+ L L+++++
Sbjct: 128 FLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ 187
Query: 223 GIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFR 282
P L +++ L L L+ + + ++CL L +L S+ S+
Sbjct: 188 SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST--- 244
Query: 283 QANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTN 342
G + + + ++ + + L ++ L++++
Sbjct: 245 -------------GETNSLIKKFT------------FRNVKITDESLF-QVMKLLNQISG 278
Query: 343 LTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPW 383
L L+ SRNQL F LQ ++L N PW
Sbjct: 279 LLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTN------PW 313
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 96.0 bits (239), Expect = 2e-21
Identities = 51/249 (20%), Positives = 101/249 (40%), Gaps = 18/249 (7%)
Query: 333 IPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPW-SLGSLGGL 391
IP L+ + +LDLS N++T S+ + LQ L L +N + +I S SLG L
Sbjct: 46 IPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN-TIEEDSFSSLGSL 102
Query: 392 VKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSL-SNILNLVGLYLQHN-KL 449
L+L+ N LS + F L LT L+L N +SL S++ L L + +
Sbjct: 103 EHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTF 162
Query: 450 SGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDL-G 508
+ + F+ + + + + P+SL ++ +++L LH + +
Sbjct: 163 TKIQRKDFAGLT--FLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVD 219
Query: 509 NLMQLEYLDVSRNRLCG----QIPE----TMCSLSNLLYLSLAENRLEGMVPRSGICQNL 560
+E L++ L ++ ++ + + + L ++ L
Sbjct: 220 VTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGL 279
Query: 561 SKISLTGNK 569
++ + N+
Sbjct: 280 LELEFSRNQ 288
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 7e-15
Identities = 47/257 (18%), Positives = 90/257 (35%), Gaps = 20/257 (7%)
Query: 28 NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEI-GNCSMLKSISLSNNFLSGSIPREL 86
N+++ S L +++L+L+SN I I + + L+ + LS N+LS ++
Sbjct: 62 NRITYISNSDLQRCVNLQALVLTSNG-INTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSW 119
Query: 87 CTS-ESLEEIDLDGNLLTGTI--EGVFEKCSNLSQLVIFRNHIYGSIPEY-LSKLP-LMV 141
SL ++L GN T+ +F + L L + + I + L L
Sbjct: 120 FKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEE 178
Query: 142 LDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEV-GNAAALERLVLTNNMLKGH 200
L++D+++ P S+ + + + L +++E L L + L
Sbjct: 179 LEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTF 237
Query: 201 LPKEI--------GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEK 252
E+ + + + L L L+ N L +
Sbjct: 238 HFSELSTGETNSLIKKFTFRNVKITDESLFQ-VMKLLNQISGLLELEFSRNQLKSVPDGI 296
Query: 253 IADLAQLQCLVLSHNNL 269
L LQ + L N
Sbjct: 297 FDRLTSLQKIWLHTNPW 313
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 1e-12
Identities = 49/240 (20%), Positives = 93/240 (38%), Gaps = 27/240 (11%)
Query: 2 LSFNALSGSLPEE----LSDLPILTFAAEKNQLSGSLPS-WLGNWNQMESLLLSSNQFIG 56
L+ N ++ ++ E+ L L L + N LS +L S W + + L L N
Sbjct: 83 LTSNGIN-TIEEDSFSSLGSLEHLDLS--YNYLS-NLSSSWFKPLSSLTFLNLLGNP-YK 137
Query: 57 KIPPEI--GNCSMLKSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNLLTGTIEGVFEKC 113
+ + + L+ + + N I R+ LEE+++D + L +
Sbjct: 138 TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSI 197
Query: 114 SNLSQLVIFRNHIYGSIPEY-------LSKLPLMVLDLDSNNFTGIIPV---SIWNSETL 163
N+S L++ + E + L L DLD+ +F+ + S+ T
Sbjct: 198 QNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTF 256
Query: 164 MEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEI-GNLSALSVLDLNSNLFD 222
+ L + + + L L + N LK +P I L++L + L++N +D
Sbjct: 257 RNVKITDESLF-QVMKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPWD 314
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 8e-05
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 15/113 (13%)
Query: 489 LTNLDLHENKFTGEIPP-DLGNLMQLEYLDVSRNRLCGQIPETM-CSLSNLLYLSLAENR 546
+ +LDL N+ T I DL + L+ L ++ N + I E SL +L +L L+ N
Sbjct: 54 VKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGI-NTIEEDSFSSLGSLEHLDLSYNY 111
Query: 547 LEGMVPRSGICQNLSK---ISLTGNKDLCGKIIGSNCQVKTFGKLALLHAFGL 596
L + S + LS ++L GN + + F L L +
Sbjct: 112 LSNL--SSSWFKPLSSLTFLNLLGNP------YKTLGETSLFSHLTKLQILRV 156
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 120 bits (301), Expect = 4e-29
Identities = 37/305 (12%), Positives = 80/305 (26%), Gaps = 65/305 (21%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGH------REFTAEMETLGKVKHQ--- 735
++G +A G++ V + +E + L +K+Q
Sbjct: 85 VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA 144
Query: 736 ----------NLVPLLGYCSFDEEK-----------LLVYEYMVNGSLDL--WLRNRTGS 772
+LV + +Y M + L + + +
Sbjct: 145 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSST 204
Query: 773 LEVLGWDKRYKIACGAARGLAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831
+ L R ++ R LA LH +G ++H ++ +I+L++ + F
Sbjct: 205 HKSLVHHARLQLTLQVIRLLASLHHYG----LVHTYLRPVDIVLDQRGGVFLTGFEHLVR 260
Query: 832 ISACETHVSTDIAGTFGYIPPE-----YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 886
A T D ++ G+ + + P
Sbjct: 261 DGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP---- 316
Query: 887 FKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM 946
D W+F+ + + ++ LR R
Sbjct: 317 NTDDAALGGSEWIFR-----------SCKNIPQPVRALLEGFLRY-------PKEDRLLP 358
Query: 947 LHVLK 951
L ++
Sbjct: 359 LQAME 363
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 6e-29
Identities = 66/346 (19%), Positives = 110/346 (31%), Gaps = 62/346 (17%)
Query: 662 FEQPLMRLTLVHILEATNNFCKTNIIGDG--GFGTVYKAA-LPDGKTVAVKK--LSQAKT 716
+ L + L + +IG G TV A P G+ V V++ L
Sbjct: 8 HMENLYFQGMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN 67
Query: 717 QGHREFTAEMETLGKVKHQNLVPLLGYCSF-DEEKL-LVYEYMVNGSL-DLWLRNRTGSL 773
+ E+ H N+VP +F + +L +V +M GS DL + +
Sbjct: 68 EMVTFLQGELHVSKLFNHPNIVPY--RATFIADNELWVVTSFMAYGSAKDLICTHFMDGM 125
Query: 774 -EVLGWDKRYKIAC---GAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829
E+ IA G + L ++HH +HR +KAS+IL++ + + ++
Sbjct: 126 NELA-------IAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSN 175
Query: 830 RLISACETHVST------DIAGTFGYIPPEYGQSGRS--TTRGDVYSFGVILLELVTGKE 881
+ + ++ PE Q + D+YS G+ EL G
Sbjct: 176 LSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHV 235
Query: 882 P----------------TGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMM 925
P T P D + + + D +
Sbjct: 236 PFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNG 295
Query: 926 LKMLRIAGD------------CLSDNPAMRPTMLHVLK--FLKEIK 957
CL NP RP+ +L F K+IK
Sbjct: 296 DSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 341
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 7e-29
Identities = 58/244 (23%), Positives = 92/244 (37%), Gaps = 16/244 (6%)
Query: 187 LERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNL--FDGIIPYELGDCISLTTLDLGNNN 244
RL L +N L+ L+ L+ L L+SN F G SL LDL N
Sbjct: 30 ATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNG 89
Query: 245 LSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNR 304
+ + L QL+ L H+NL + S F ++ +L ++ D+S+
Sbjct: 90 VIT-MSSNFLGLEQLEHLDFQHSNLKQ-MS--EFSVFL--SLRNLIYL------DISHTH 137
Query: 305 LSGPIPEELGSCVVVVDLLL-NNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGD 363
+ L + N+ +P + L NLT LDLS+ QL P+ F
Sbjct: 138 TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS 197
Query: 364 SIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNL-KELTHLDLSF 422
LQ L + +N + L L L+ + N + + L L+L+
Sbjct: 198 LSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQ 257
Query: 423 NELD 426
N+
Sbjct: 258 NDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-28
Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 16/255 (6%)
Query: 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLT--G 379
+ N+ L+ +P + ++ T L+L N+L F +L L L +N L+ G
Sbjct: 12 IRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKG 68
Query: 380 SIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSL-SNILN 438
S L L+L+ N + + ++F L++L HLD + L S+ ++ N
Sbjct: 69 CCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRN 127
Query: 439 LVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPR-SLGNLSYLTNLDLHEN 497
L+ L + H + +F+ + + + M+ N F L LT LDL +
Sbjct: 128 LIYLDISHTHTRVAFNGIFNGLS--SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 185
Query: 498 KFTGEIPPD-LGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS-- 554
+ ++ P +L L+ L++S N L++L L + N + +
Sbjct: 186 QLE-QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM-TSKKQEL 243
Query: 555 -GICQNLSKISLTGN 568
+L+ ++LT N
Sbjct: 244 QHFPSSLAFLNLTQN 258
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 2e-28
Identities = 59/294 (20%), Positives = 92/294 (31%), Gaps = 66/294 (22%)
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293
S T L+L +N L L L QL L LS N LS S L ++
Sbjct: 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLS--FKGCCSQSDF--GTTSLKYL- 83
Query: 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQL 353
DLS+N + + + L L LD + L
Sbjct: 84 -----DLSFNGVI-------------------------TMSSNFLGLEQLEHLDFQHSNL 113
Query: 354 TG-PIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNK-LSGKVPTSFGN 411
S F L L + + + L L L + GN +P F
Sbjct: 114 KQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE 173
Query: 412 LKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMS 471
L+ LT LDLS +L+ P++ +++ +L L + HN ++
Sbjct: 174 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF------------------SLD 215
Query: 472 NNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDL--GNLMQLEYLDVSRNRL 523
+ L+ L LD N L +L++++N
Sbjct: 216 TFPYKC--------LNSLQVLDYSLNHIM-TSKKQELQHFPSSLAFLNLTQNDF 260
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 99.7 bits (249), Expect = 5e-23
Identities = 57/341 (16%), Positives = 107/341 (31%), Gaps = 89/341 (26%)
Query: 65 CSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRN 124
CS I ++ L+ S+P + S ++L+ N L GVF+K + L++L + N
Sbjct: 7 CS-GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSN 62
Query: 125 HIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNA 184
+ S + G
Sbjct: 63 GLS-------------FKGCCSQSDFGT-------------------------------- 77
Query: 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYEL-GDCISLTTLDLGNN 243
+L+ L L+ N + + L L LD + + + + +L LD+ +
Sbjct: 78 TSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT 136
Query: 244 NLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYN 303
+ L+ L+ L ++ N+ + F + +L+F+ DLS
Sbjct: 137 HTRVAFNGIFNGLSSLEVLKMAGNSF---QENFLPDIFT--ELRNLTFL------DLSQC 185
Query: 304 RLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGD 363
+L + P + + L++L L++S N +
Sbjct: 186 QLEQ-LS-----------------------PTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 221
Query: 364 SIKLQGLYLGNNQLTGSIPWSL--GSLGGLVKLNLTGNKLS 402
LQ L N + + L LNLT N +
Sbjct: 222 LNSLQVLDYSLNHIM-TSKKQELQHFPSSLAFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 4e-19
Identities = 56/251 (22%), Positives = 87/251 (34%), Gaps = 33/251 (13%)
Query: 27 KNQLSGSLPSWLGNWNQMESLLLSSNQ--FIGKIPPEIGNCSMLKSISLSNNFLSGSIPR 84
N+L Q+ L LSSN F G + LK + LS N + ++
Sbjct: 37 SNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSS 95
Query: 85 ELCTSESLEEIDLDGNLLTGTIE-GVFEKCSNLSQLVIFRNHIYGSIPEY-LSKLP-LMV 141
E LE +D + L E VF NL L I H + L L V
Sbjct: 96 NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT-RVAFNGIFNGLSSLEV 154
Query: 142 LDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHL 201
L + N+F I+ L L L+ L+ L
Sbjct: 155 LKMAGNSFQENFLPDIFT-----------------------ELRNLTFLDLSQCQLE-QL 190
Query: 202 PKEI-GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADL-AQL 259
+LS+L VL+++ N F + + SL LD N++ +++ + L
Sbjct: 191 SPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSL 250
Query: 260 QCLVLSHNNLS 270
L L+ N+ +
Sbjct: 251 AFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 4e-09
Identities = 31/158 (19%), Positives = 55/158 (34%), Gaps = 11/158 (6%)
Query: 2 LSFNALSGSLPEELSDLPILTFAA-EKNQLSGSLP--SWLGNWNQMESLLLSSNQFIGKI 58
LSFN + ++ L L + + L + S + + L +S
Sbjct: 85 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTH-TRVA 141
Query: 59 PPEI-GNCSMLKSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNLLTGTIEGVFEKCSNL 116
I S L+ + ++ N + ++ T +L +DL L F S+L
Sbjct: 142 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 201
Query: 117 SQLVIFRNHIYGSIPEY-LSKLP-LMVLDLDSNNFTGI 152
L + N+ S+ + L L VLD N+
Sbjct: 202 QVLNMSHNNF-FSLDTFPYKCLNSLQVLDYSLNHIMTS 238
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 8e-29
Identities = 36/318 (11%), Positives = 91/318 (28%), Gaps = 76/318 (23%)
Query: 686 IIGDGGFGTVYKA-ALPDGKTVAVKKLSQAK----------------------------T 716
++G +A G++ V +
Sbjct: 80 VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA 139
Query: 717 QGHREFTAEMETLGKVKHQNLVPLLGYCS--FDEEKLLVYEYMVNGSLDL--WLRNRTGS 772
+ H F + + + + ++ + + + +Y M + L + + +
Sbjct: 140 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSST 199
Query: 773 LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832
+ L R ++ R LA LHH ++H ++ +I+L++ + F
Sbjct: 200 HKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRD 256
Query: 833 SACETHVSTDIAGTFGYIPPEY-----------GQSGRSTTRGDVYSFGVILLELVTGKE 881
A + + G+ PPE + T D ++ G+++ +
Sbjct: 257 GA-----RVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADL 311
Query: 882 PTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPA 941
P W+F+ + + ++ LR
Sbjct: 312 P----ITKDAALGGSEWIFR-----------SCKNIPQPVRALLEGFLRY-------PKE 349
Query: 942 MRPTMLHVLK--FLKEIK 957
R L ++ ++++
Sbjct: 350 DRLLPLQAMETPEYEQLR 367
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 2e-28
Identities = 74/299 (24%), Positives = 121/299 (40%), Gaps = 55/299 (18%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGYC 744
+ +GGF VY+A + G+ A+K+L + + +R E+ + K+ H N+V
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 745 SFDEEKLL--VYEYMV-----NGSL--DLWLRNRTGSL---EVLGWDKRYKIACGAARGL 792
S +E+ E+++ G L L G L VL KI R +
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVL------KIFYQTCRAV 149
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVST---------DI 843
+H P IIHRD+K N+LL+ + K+ DFG A IS + + +I
Sbjct: 150 QHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI 208
Query: 844 A--GTFGYIPPE--YGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGW 898
T Y PE S + D+++ G IL L + P F E G +
Sbjct: 209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP----F---EDGAKL-- 259
Query: 899 VFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957
++ G+ ++ D++ + L I L NP R ++ V+ L+EI
Sbjct: 260 ---RIVNGK------YSIPPHDTQYTVFHSL-IRA-MLQVNPEERLSIAEVVHQLQEIA 307
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 121 bits (304), Expect = 2e-28
Identities = 67/304 (22%), Positives = 117/304 (38%), Gaps = 31/304 (10%)
Query: 676 EATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVK 733
+ + +G GGFG V + G+ VA+K+ Q + +RE + E++ + K+
Sbjct: 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 70
Query: 734 HQNLVPLL------GYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACG 787
H N+V + ++ LL EY G L +L N+ + L +
Sbjct: 71 HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL-NQFENCCGLKEGPIRTLLSD 129
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILLNEEFEA---KVADFGLARLISACETHVSTDIA 844
+ L +LH IIHRD+K NI+L + K+ D G A+ + + + T+
Sbjct: 130 ISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD--QGELCTEFV 184
Query: 845 GTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE------FKDIEGGNLVGW 898
GT Y+ PE + + T D +SFG + E +TG P P + +
Sbjct: 185 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHI 244
Query: 899 VFQKMKKGQA---ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVL--KFL 953
V G + + P L+ + + L+ L + R T
Sbjct: 245 VVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCM---LMWHQRQRGTDPQNPNVGCF 301
Query: 954 KEIK 957
+ +
Sbjct: 302 QALD 305
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 3e-28
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 681 FCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVP 739
+ +GDG FG VYKA G A K + + ++ E+E L H +V
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 740 LLGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIAC---GAARGLAFL 795
LLG + + KL ++ E+ G++D + L +I L FL
Sbjct: 81 LLG-AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT------EPQIQVVCRQMLEALNFL 133
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGY------ 849
H IIHRD+KA N+L+ E + ++ADFG++ + I GT Y
Sbjct: 134 HSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GT-PYWMAPEV 188
Query: 850 IPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
+ E + + D++S G+ L+E+ + P
Sbjct: 189 VMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 4e-28
Identities = 69/276 (25%), Positives = 121/276 (43%), Gaps = 46/276 (16%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHR---EFTAEMETLGKVKHQNLVPLLG 742
+G G FG VY A +A+K L +A+ + + E+E ++H N++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 743 YCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP 801
Y D ++ L+ EY G++ L+ + E + A L++ H +
Sbjct: 77 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDE----QRTATYITELANALSYCH---SK 128
Query: 802 HIIHRDIKASNILLNEEFEAKVADFGLA------RLISACETHVSTDIAGTFGYIPPEYG 855
+IHRDIK N+LL E K+ADFG + R C GT Y+PPE
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC---------GTLDYLPPEMI 179
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915
+ + D++S GV+ E + GK P F+ ++++ + + P
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQET----YKRISRV---EFTFPD 228
Query: 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+T ++ ++ ++L+ NP+ RP + VL+
Sbjct: 229 FVTEGARDLISRLLKH-------NPSQRPMLREVLE 257
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 4e-28
Identities = 62/233 (26%), Positives = 94/233 (40%), Gaps = 51/233 (21%)
Query: 676 EATNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKH 734
+ + F + G G FGTV G +VA+KK+ Q +RE M+ L + H
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNREL-QIMQDLAVLHH 78
Query: 735 QNLVPLL------GYCSFDEEKL-LVYEYMVNGSLDL--WLRNRTGSLEVLGWDK----R 781
N+V L G + L +V EY+ L RN
Sbjct: 79 PNIVQLQSYFYTLGERDRRDIYLNVVMEYV---PDTLHRCCRNYYRRQVAPPPILIKVFL 135
Query: 782 YKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE-FEAKVADFGLARLISACETHVS 840
+++ R + LH + ++ HRDIK N+L+NE K+ DFG A+ +S E +V+
Sbjct: 136 FQL----IRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA 190
Query: 841 TDIAGTFGYI------PPE-------YGQSGRSTTRGDVYSFGVILLELVTGK 880
YI PE Y TT D++S G I E++ G+
Sbjct: 191 --------YICSRYYRAPELIFGNQHY------TTAVDIWSVGCIFAEMMLGE 229
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 4e-28
Identities = 55/255 (21%), Positives = 93/255 (36%), Gaps = 44/255 (17%)
Query: 647 SSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAA-LPDGKT 705
R N + ++ E + +G G FG V++ G
Sbjct: 26 KLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQ 85
Query: 706 VAVKK--LSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY-EYMVNGSL 762
AVKK L + + E+ + +VPL G + + ++ E + GSL
Sbjct: 86 CAVKKVRLEVFRVE-------ELVACAGLSSPRIVPLYG-AVREGPWVNIFMELLEGGSL 137
Query: 763 DLWLRNRTGSL----------EVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASN 812
++ + G L + L GL +LH T I+H D+KA N
Sbjct: 138 GQLIK-QMGCLPEDRALYYLGQAL-------------EGLEYLH---TRRILHGDVKADN 180
Query: 813 ILLNEE-FEAKVADFGLARLISACETHVST----DIAGTFGYIPPEYGQSGRSTTRGDVY 867
+LL+ + A + DFG A + S I GT ++ PE + D++
Sbjct: 181 VLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIW 240
Query: 868 SFGVILLELVTGKEP 882
S ++L ++ G P
Sbjct: 241 SSCCMMLHMLNGCHP 255
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 6e-28
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 681 FCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQNLV 738
F K IG G FG V+K K VA+K + + + E E+ L + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 739 PLLGYCSF-DEEKL-LVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIAC---GAARGL 792
Y S+ + KL ++ EY+ GS DL G L+ +IA +GL
Sbjct: 84 KY--YGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLD------ETQIATILREILKGL 132
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
+LH IHRDIKA+N+LL+E E K+ADFG+A ++ + +T + GT ++ P
Sbjct: 133 DYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAP 188
Query: 853 EYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
E + ++ D++S G+ +EL G+ P
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIELARGEPP 218
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 6e-28
Identities = 62/264 (23%), Positives = 100/264 (37%), Gaps = 39/264 (14%)
Query: 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNN 244
L L N ++ +L L +L L+ N I +L TL+L +N
Sbjct: 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123
Query: 245 LSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNR 304
L+ + L++L+ L L +N + S PS F +P L +
Sbjct: 124 LTTIPNGAFVYLSKLKELWLRNNPIE----SIPSYAFN--RIPSLRRLD----------- 166
Query: 305 LSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDS 364
L LS G+ L+NL L+L+ L IP+
Sbjct: 167 ------------------LGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPN-LTPL 206
Query: 365 IKLQGLYLGNNQLTGSIPW-SLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN 423
IKL L L N L+ +I S L L KL + +++ +F NL+ L ++L+ N
Sbjct: 207 IKLDELDLSGNHLS-AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHN 265
Query: 424 ELDGQLPSSLSNILNLVGLYLQHN 447
L + + +L ++L HN
Sbjct: 266 NLTLLPHDLFTPLHHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 2e-27
Identities = 59/251 (23%), Positives = 104/251 (41%), Gaps = 13/251 (5%)
Query: 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSI 381
++ L ++P +S TN L+L NQ+ + F L+ L L N +
Sbjct: 48 VICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIE 104
Query: 382 PWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVG 441
+ L L L L N+L+ +F L +L L L N ++ + + I +L
Sbjct: 105 IGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRR 164
Query: 442 LYLQH-NKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFT 500
L L +LS + F + + +N++ +P +L L L LDL N +
Sbjct: 165 LDLGELKRLSYISEGAFEGLS--NLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLS 220
Query: 501 GEIPPD-LGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS--GIC 557
I P LM L+ L + ++++ +L +L+ ++LA N L ++P
Sbjct: 221 -AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDLFTPL 278
Query: 558 QNLSKISLTGN 568
+L +I L N
Sbjct: 279 HHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 98.7 bits (246), Expect = 7e-22
Identities = 70/336 (20%), Positives = 105/336 (31%), Gaps = 95/336 (28%)
Query: 68 LKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIY 127
+ L +P + S + ++L N + F+ +L L + RNHI
Sbjct: 45 FSKVICVRKNLR-EVPDGI--STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHI- 100
Query: 128 GSIPEY-LSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAA 185
+I + L L L+L N T I
Sbjct: 101 RTIEIGAFNGLANLNTLELFDNRLTTI--------------------------------- 127
Query: 186 ALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNL 245
N LS L L L +N + I Y SL LDLG
Sbjct: 128 -------PNGAFVY--------LSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKR 172
Query: 246 SGLIPEKI-ADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNR 304
I E L+ L+ L L+ NL +P+L+ + DLS N
Sbjct: 173 LSYISEGAFEGLSNLRYLNLAMCNLR--------------EIPNLTPLIKLDELDLSGNH 218
Query: 305 LSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDS 364
LS I PGS L +L L + ++Q+ + F +
Sbjct: 219 LSA-IR-----------------------PGSFQGLMHLQKLWMIQSQIQVIERNAFDNL 254
Query: 365 IKLQGLYLGNNQLTGSIPWS-LGSLGGLVKLNLTGN 399
L + L +N LT +P L L +++L N
Sbjct: 255 QSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 87.1 bits (216), Expect = 4e-18
Identities = 58/231 (25%), Positives = 89/231 (38%), Gaps = 12/231 (5%)
Query: 45 ESLLLSSNQFIGKIPPEI-GNCSMLKSISLSNNFLSGSIPRE-LCTSESLEEIDLDGNLL 102
L L NQ I I + L+ + LS N + +I +L ++L N L
Sbjct: 67 RLLNLHENQ-IQIIKVNSFKHLRHLEILQLSRNHIR-TIEIGAFNGLANLNTLELFDNRL 124
Query: 103 TGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYL-SKLP-LMVLDLDSNN-FTGIIPVSIWN 159
T G F S L +L + N I SIP Y +++P L LDL + I +
Sbjct: 125 TTIPNGAFVYLSKLKELWLRNNPI-ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEG 183
Query: 160 SETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEI-GNLSALSVLDLNS 218
L + A L +P + L+ L L+ N L + L L L +
Sbjct: 184 LSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLS-AIRPGSFQGLMHLQKLWMIQ 240
Query: 219 NLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNL 269
+ I + SL ++L +NNL+ L + L L+ + L HN
Sbjct: 241 SQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 291
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 9e-11
Identities = 48/223 (21%), Positives = 78/223 (34%), Gaps = 33/223 (14%)
Query: 2 LSFNALSGSLPEELSDLPILTF-AAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
LS N + + L L N+L+ ++++ L L +N I IP
Sbjct: 95 LSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNP-IESIPS 153
Query: 61 EI-GNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQL 119
L+ + L L+ EG FE SNL L
Sbjct: 154 YAFNRIPSLRRLDLGEL-----------------------KRLSYISEGAFEGLSNLRYL 190
Query: 120 VIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLP 178
+ ++ IP L+ L L LDL N+ + I P S L + + ++ +
Sbjct: 191 NLAMCNLR-EIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ-VIE 247
Query: 179 YEV-GNAAALERLVLTNNMLKGHLPKEI-GNLSALSVLDLNSN 219
N +L + L +N L LP ++ L L + L+ N
Sbjct: 248 RNAFDNLQSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHN 289
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 9e-28
Identities = 62/275 (22%), Positives = 97/275 (35%), Gaps = 39/275 (14%)
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIP 358
+ LS +P+ + S L L N + + L +L L L RN +
Sbjct: 60 VCTRRGLSE-VPQGIPSNTRY--LNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEV 116
Query: 359 SEFGDSIKLQGLYLGNNQLTGSIPW-SLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTH 417
F L L L +N LT IP + L L +L L N + +F + L
Sbjct: 117 GAFNGLASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMR 175
Query: 418 LDLS-FNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFD 476
LDL +L+ + + NL L L +
Sbjct: 176 LDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD------------------------- 210
Query: 477 GGLPRSLGNLSYLTNLDLHENKFTGEIPPD-LGNLMQLEYLDVSRNRLCGQIPETMCSLS 535
+P +L L L L++ N F EI P L L+ L V +++ L+
Sbjct: 211 --MP-NLTPLVGLEELEMSGNHFP-EIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLA 266
Query: 536 NLLYLSLAENRLEGMVPRS--GICQNLSKISLTGN 568
+L+ L+LA N L +P + L ++ L N
Sbjct: 267 SLVELNLAHNNLS-SLPHDLFTPLRYLVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 2e-27
Identities = 63/264 (23%), Positives = 95/264 (35%), Gaps = 22/264 (8%)
Query: 187 LERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLS 246
++V T L +P+ I S L+L N I L L LG N++
Sbjct: 56 FSKVVCTRRGLS-EVPQGI--PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR 112
Query: 247 GLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLS 306
+ LA L L L N L+ PS F + L + L N +
Sbjct: 113 QIEVGAFNGLASLNTLELFDNWLT----VIPSGAFE--YLSKLREL------WLRNNPIE 160
Query: 307 GPIPEE-LGSCVVVVDL-LLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDS 364
IP ++ L L L G+ L NL L+L + +P+
Sbjct: 161 S-IPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPN-LTPL 217
Query: 365 IKLQGLYLGNNQLTGSIPW-SLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN 423
+ L+ L + N I S L L KL + +++S +F L L L+L+ N
Sbjct: 218 VGLEELEMSGNHFP-EIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHN 276
Query: 424 ELDGQLPSSLSNILNLVGLYLQHN 447
L + + LV L+L HN
Sbjct: 277 NLSSLPHDLFTPLRYLVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-26
Identities = 61/240 (25%), Positives = 93/240 (38%), Gaps = 15/240 (6%)
Query: 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNN 244
+ L L N ++ +L L VL L N I SL TL+L +N
Sbjct: 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134
Query: 245 LSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLS-YN 303
L+ + L++L+ L L +N + S PS F +P L + DL
Sbjct: 135 LTVIPSGAFEYLSKLRELWLRNNPIE----SIPSYAFN--RVPSLMRL------DLGELK 182
Query: 304 RLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGD 363
+L + L L + +P +L+ L L L++S N P F
Sbjct: 183 KLEYISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHG 240
Query: 364 SIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN 423
L+ L++ N+Q++ + L LV+LNL N LS F L+ L L L N
Sbjct: 241 LSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 6e-24
Identities = 60/268 (22%), Positives = 93/268 (34%), Gaps = 20/268 (7%)
Query: 113 CSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNL 172
CSN V+ +P+ + L+L NN I + + L N
Sbjct: 52 CSNQFSKVVCTRRGLSEVPQGIPS-NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNS 110
Query: 173 LEGSLPYEV-GNAAALERLVLTNNMLKGHLPKEI-GNLSALSVLDLNSNLFDGIIPYELG 230
+ + A+L L L +N L +P LS L L L +N + I Y
Sbjct: 111 IR-QIEVGAFNGLASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFN 168
Query: 231 DCISLTTLDLGNNNLSGLIPEKI-ADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDL 289
SL LDLG I E L L+ L L N+ +MP+L
Sbjct: 169 RVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK--------------DMPNL 214
Query: 290 SFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLS 349
+ + ++S N P + L + N+ +S + L +L L+L+
Sbjct: 215 TPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLA 274
Query: 350 RNQLTGPIPSEFGDSIKLQGLYLGNNQL 377
N L+ F L L+L +N
Sbjct: 275 HNNLSSLPHDLFTPLRYLVELHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 1e-19
Identities = 64/230 (27%), Positives = 88/230 (38%), Gaps = 32/230 (13%)
Query: 45 ESLLLSSNQFIGKIPPEI-GNCSMLKSISLSNNFLSGSIPRE-LCTSESLEEIDLDGNLL 102
L L N I I + + L+ + L N + I SL ++L N L
Sbjct: 78 RYLNLMENN-IQMIQADTFRHLHHLEVLQLGRNSIR-QIEVGAFNGLASLNTLELFDNWL 135
Query: 103 TGTIEGVFEKCSNLSQLVIFRNHIYGSIPEY-LSKLP-LMVLDLDSNNFTGIIPVSIWNS 160
T G FE S L +L + N I SIP Y +++P LM LDL I
Sbjct: 136 TVIPSGAFEYLSKLRELWLRNNPI-ESIPSYAFNRVPSLMRLDLGELKKLEYIS------ 188
Query: 161 ETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNL 220
EG L L+ L L +K +P + L L L+++ N
Sbjct: 189 ---------EGAFEG-LF-------NLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNH 229
Query: 221 FDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270
F I P SL L + N+ +S + LA L L L+HNNLS
Sbjct: 230 FPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS 279
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 87.5 bits (217), Expect = 4e-18
Identities = 52/248 (20%), Positives = 83/248 (33%), Gaps = 34/248 (13%)
Query: 27 KNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEI-GNCSMLKSISLSNNFLSGSIPRE 85
+N + + + +E L L N I +I + L ++ L +N+L+ IP
Sbjct: 84 ENNIQMIQADTFRHLHHLEVLQLGRNS-IRQIEVGAFNGLASLNTLELFDNWLT-VIPSG 141
Query: 86 LCTS-ESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFR-NHIYGSIPEY-LSKLP-LMV 141
L E+ L N + F + +L +L + + I E L L
Sbjct: 142 AFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKL-EYISEGAFEGLFNLKY 200
Query: 142 LDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHL 201
L+L N + + LE L ++ N
Sbjct: 201 LNLGMCNIK-----------DMPNLT---------------PLVGLEELEMSGNHFPEIR 234
Query: 202 PKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQC 261
P LS+L L + ++ I SL L+L +NNLS L + L L
Sbjct: 235 PGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVE 294
Query: 262 LVLSHNNL 269
L L HN
Sbjct: 295 LHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 1e-09
Identities = 35/176 (19%), Positives = 59/176 (33%), Gaps = 9/176 (5%)
Query: 1 MLSFNALSGSLPEE-LSDLPILTF-AAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKI 58
L N L+ +P L L N + + L L + + I
Sbjct: 129 ELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYI 187
Query: 59 PPEI-GNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLS 117
LK ++L + +P L LEE+++ GN G F S+L
Sbjct: 188 SEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLK 245
Query: 118 QLVIFRNHIYGSIPEY-LSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANN 171
+L + + + I L L+ L+L NN + + L+E +N
Sbjct: 246 KLWVMNSQV-SLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 300
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 1e-27
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 679 NNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQN 736
+++ +IG G V A P + VA+K+++ K Q + E++ + + H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 737 LVPLLGYCSF-DEEKL-LVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIAC---GAAR 790
+V Y SF +++L LV + + GS+ D+ G IA
Sbjct: 75 IVSY--YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYI 850
GL +LH IHRD+KA NILL E+ ++ADFG++ ++ + TF
Sbjct: 133 GLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 851 P----PEYGQSGRS-TTRGDVYSFGVILLELVTGKEP 882
P PE + R + D++SFG+ +EL TG P
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 3e-27
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 21/227 (9%)
Query: 663 EQPLMRL-TLVHILEATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHR 720
E+ L +L ++V + + + + IG G GTVY A + G+ VA+++++ +
Sbjct: 3 EEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62
Query: 721 EFTAEMETLGKVKHQNLVPLLGYCSFDEEKL-LVYEYMVNGSL-DLWLRNRTGSLEVLGW 778
E+ + + K+ N+V L ++L +V EY+ GSL D+ +
Sbjct: 63 LIINEILVMRENKNPNIVNYLD-SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ---- 117
Query: 779 DKRYKIAC---GAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835
IA + L FLH + +IHRDIK+ NILL + K+ DFG I+
Sbjct: 118 -----IAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169
Query: 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
++ ST + GT ++ PE + D++S G++ +E++ G+ P
Sbjct: 170 QSKRST-MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 3e-27
Identities = 60/308 (19%), Positives = 122/308 (39%), Gaps = 49/308 (15%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTA-----------------EMETL 729
+ G F + D K A+KK ++ + R+FT E++ +
Sbjct: 39 LNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQII 97
Query: 730 GKVKHQNLVPLLGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGA 788
+K++ + G + + +++ ++YEYM N S+ + + ++
Sbjct: 98 TDIKNEYCLTCEGIIT-NYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCI 156
Query: 789 AR----GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIA 844
+ +++H+ +I HRD+K SNIL+++ K++DFG + + + S
Sbjct: 157 IKSVLNSFSYIHNEK--NICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS---R 211
Query: 845 GTFGYIPPE--YGQSGRSTTRGDVYSFGVILLELVTGK-----EPTGPE-FKDIEGGNL- 895
GT+ ++PPE +S + + D++S G+ L + + + E F +I N+
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIE 271
Query: 896 --VGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK-- 951
+ L+ + + LR NPA R T LK
Sbjct: 272 YPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRK-------NPAERITSEDALKHE 324
Query: 952 FLKEIKVE 959
+L + +E
Sbjct: 325 WLADTNIE 332
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 3e-27
Identities = 64/270 (23%), Positives = 115/270 (42%), Gaps = 34/270 (12%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHR---EFTAEMETLGKVKHQNLVPLLG 742
+G G FG VY A + +A+K L +++ + + E+E ++H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 743 YCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP 801
Y D +++ L+ E+ G L L+ E ++A L + H
Sbjct: 82 YFH-DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA----LHYCH---ER 133
Query: 802 HIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRST 861
+IHRDIK N+L+ + E K+ADFG + + T + GT Y+PPE +
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR--T-MCGTLDYLPPEMIEGKTHD 190
Query: 862 TRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADS 921
+ D++ GV+ E + G P F +++ D+ P L+ S
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPP----FDSPSHTET----HRRIVNV---DLKFPPFLSDGS 239
Query: 922 KPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
K ++ K+LR +P R + V++
Sbjct: 240 KDLISKLLRY-------HPPQRLPLKGVME 262
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 5e-27
Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 28/236 (11%)
Query: 664 QPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREF 722
+ L + L + + F ++G+G +G VYK + G+ A+K + E
Sbjct: 9 RSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD-VTGDEEEEI 67
Query: 723 TAEMETLGKV-KHQNLVPLLG-----YCSFDEEKL-LVYEYMVNGSL-DLWLRNRTGSLE 774
E+ L K H+N+ G +++L LV E+ GS+ DL + +L
Sbjct: 68 KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTL- 126
Query: 775 VLGWDKRYKIAC---GAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831
K IA RGL+ LH +IHRDIK N+LL E E K+ DFG++
Sbjct: 127 -----KEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178
Query: 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRG-----DVYSFGVILLELVTGKEP 882
+ +T I GT ++ PE + D++S G+ +E+ G P
Sbjct: 179 LDRTVGRRNTFI-GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 7e-27
Identities = 70/213 (32%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 681 FCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFT---AEMETLGKVKHQN 736
F IG G FG VY A + + + VA+KK+S + Q + ++ E+ L K++H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 737 LVPLLGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIAC---GAARGL 792
+ G C E LV EY + + DL L L+ +IA GA +GL
Sbjct: 116 TIQYRG-CYLREHTAWLVMEYCLGSASDL-LEVHKKPLQ------EVEIAAVTHGALQGL 167
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
A+LH + ++IHRD+KA NILL+E K+ DFG A +++ + V GT ++ P
Sbjct: 168 AYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFV-----GTPYWMAP 219
Query: 853 E---YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
E G+ + DV+S G+ +EL K P
Sbjct: 220 EVILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 8e-27
Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHRE---FTA--EMETLGKVK 733
+ K +G+G +G VYKA G+ VA+K++ + E TA E+ L ++
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRI---RLDAEDEGIPSTAIREISLLKELH 77
Query: 734 HQNLVPLLGYCSFDEEKLLVYEYMVNGSLDL--WLRNRTGSLEVLGWDKRYKIACGAA-- 789
H N+V L+ + LV+E+M DL L L+ +I
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFM---EKDLKKVLDENKTGLQD------SQIKIYLYQL 128
Query: 790 -RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFG 848
RG+A H I+HRD+K N+L+N + K+ADFGLAR T T
Sbjct: 129 LRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVVTLW 184
Query: 849 YIPPE--YGQSGRSTTRGDVYSFGVILLELVTGK 880
Y P+ G S + +T D++S G I E++TGK
Sbjct: 185 YRAPDVLMG-SKKYSTSVDIWSIGCIFAEMITGK 217
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 9e-27
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 678 TNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN 736
F +G+G +G+VYKA G+ VA+K++ +E E+ + + +
Sbjct: 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPV--ESDLQEIIKEISIMQQCDSPH 85
Query: 737 LVPLLGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIAC---GAARGL 792
+V G F L +V EY GS+ +R R +L +IA +GL
Sbjct: 86 VVKYYG-SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLT------EDEIATILQSTLKGL 138
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
+LH IHRDIKA NILLN E AK+ADFG+A ++ +T I GT ++ P
Sbjct: 139 EYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVI-GTPFWMAP 194
Query: 853 EYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
E Q D++S G+ +E+ GK P
Sbjct: 195 EVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 1e-26
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 681 FCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVP 739
IG+G G V A G+ VAVK + K Q E+ + +H N+V
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 740 LLGYCSFDEEKL-LVYEYMVNGSL-DLWLRNR-------TGSLEVLGWDKRYKIACGAAR 790
+ E+L ++ E++ G+L D+ + R T VL +
Sbjct: 107 MYK-SYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVL-------------Q 152
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYI 850
LA+LH +IHRDIK+ +ILL + K++DFG IS + + GT ++
Sbjct: 153 ALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS-LVGTPYWM 208
Query: 851 PPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
PE T D++S G++++E+V G+ P
Sbjct: 209 APEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 2e-26
Identities = 69/231 (29%), Positives = 107/231 (46%), Gaps = 57/231 (24%)
Query: 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN 736
++ T +IG+G FG VY+A L G+ VA+KK+ Q K +R E++ + K+ H N
Sbjct: 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCN 108
Query: 737 LVPLLGY-----CSFDEEKL-LVYEYMVNGSLDL--WLRNRTGSLEVLGWDK----RYKI 784
+V L + DE L LV +Y+ + R+ + + + L Y++
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYV---PETVYRVARHYSRAKQTLPVIYVKLYMYQL 165
Query: 785 ACGAARGLAFLH-HGFTPHIIHRDIKASNILLNEE-FEAKVADFGLARLISACETHVSTD 842
R LA++H G I HRDIK N+LL+ + K+ DFG A+ + E +VS
Sbjct: 166 ----FRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-- 215
Query: 843 IAGTFGYI------PPE-------YGQSGRSTTRGDVYSFGVILLELVTGK 880
YI PE Y T+ DV+S G +L EL+ G+
Sbjct: 216 ------YICSRYYRAPELIFGATDY------TSSIDVWSAGCVLAELLLGQ 254
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 2e-26
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 56/232 (24%)
Query: 676 EATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQ 735
+ + +IG+G FG V++A L + VA+KK+ Q K +R E++ + VKH
Sbjct: 37 QREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR----ELQIMRIVKHP 92
Query: 736 NLVPLLGY-----CSFDEEKL-LVYEYMVNGSLDL--WLRNRTGSLEVLGWDK----RYK 783
N+V L + DE L LV EY+ + R+ + + Y+
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYV---PETVYRASRHYAKLKQTMPMLLIKLYMYQ 149
Query: 784 IACGAARGLAFLH-HGFTPHIIHRDIKASNILLNEE-FEAKVADFGLARLISACETHVST 841
+ R LA++H G I HRDIK N+LL+ K+ DFG A+++ A E +VS
Sbjct: 150 L----LRSLAYIHSIG----ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS- 200
Query: 842 DIAGTFGYI------PPE-------YGQSGRSTTRGDVYSFGVILLELVTGK 880
YI PE Y TT D++S G ++ EL+ G+
Sbjct: 201 -------YICSRYYRAPELIFGATNY------TTNIDIWSTGCVMAELMQGQ 239
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 110 bits (275), Expect = 4e-26
Identities = 38/224 (16%), Positives = 69/224 (30%), Gaps = 22/224 (9%)
Query: 678 TNNFCKTNIIGDGGFGTVYKA------ALPDGKTVAVKKLSQAKTQGHREFTAEMETLGK 731
+ +++G+G F VY+A + + +K A T ME L
Sbjct: 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKP 123
Query: 732 VKHQNLVPLLGYCSFDEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAAR 790
+ F +LV E G+L + + +V+ A
Sbjct: 124 SMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLY 183
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEA-----------KVADFGLARLISAC-ETH 838
+ +H IIH DIK N +L F + D G + + +
Sbjct: 184 MIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGT 240
Query: 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
+ T T G+ E + + D + + ++ G
Sbjct: 241 IFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYM 284
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 8e-26
Identities = 55/240 (22%), Positives = 85/240 (35%), Gaps = 37/240 (15%)
Query: 209 SALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNN 268
+A + L+ N + C +LT L L +N L+ + LA L+ L LS N
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91
Query: 269 LSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNM 328
+ S + F + L + L L +
Sbjct: 92 Q---LRSVDPATFH--GLGRLHTL------HLDRCGLQE-LG------------------ 121
Query: 329 LSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSE-FGDSIKLQGLYLGNNQLTGSIPWSLGS 387
PG L L L L N L +P + F D L L+L N+++ +
Sbjct: 122 -----PGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGNRISSVPERAFRG 175
Query: 388 LGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHN 447
L L +L L N+++ P +F +L L L L N L +L+ + L L L N
Sbjct: 176 LHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 1e-25
Identities = 58/226 (25%), Positives = 84/226 (37%), Gaps = 29/226 (12%)
Query: 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSI 381
+ L+ N +S S NLT L L N L + F L+ L L +N S+
Sbjct: 37 IFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSV 96
Query: 382 PWS-LGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLV 440
+ LG L L+L L P F L L +L L N L + ++ NL
Sbjct: 97 DPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLT 156
Query: 441 GLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFT 500
L+L N++S ++ F G L L L LH+N+
Sbjct: 157 HLFLHGNRIS------------------SVPERAFRG--------LHSLDRLLLHQNRVA 190
Query: 501 GEIPPD-LGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAEN 545
+ P +L +L L + N L E + L L YL L +N
Sbjct: 191 -HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 2e-24
Identities = 58/266 (21%), Positives = 84/266 (31%), Gaps = 65/266 (24%)
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293
+ + L N +S + L L L N L+ ++ F + L
Sbjct: 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLA----RIDAAAFT--GLALLE--- 83
Query: 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQL 353
DLS N + P + L L TL L R L
Sbjct: 84 ---QLDLSDNAQLRSVD-----------------------PATFHGLGRLHTLHLDRCGL 117
Query: 354 TGPIPSE-FGDSIKLQGLYLGNNQLTGSIPW-SLGSLGGLVKLNLTGNKLSGKVPTSFGN 411
+ F LQ LYL +N L ++P + LG L L L GN++S +F
Sbjct: 118 QE-LGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRG 175
Query: 412 LKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMS 471
L L L L N + P + ++ L+ LYL N LS +
Sbjct: 176 LHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS------------------ALP 217
Query: 472 NNLFDGGLPRSLGNLSYLTNLDLHEN 497
L L L L++N
Sbjct: 218 TEALAP--------LRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 6e-23
Identities = 54/240 (22%), Positives = 84/240 (35%), Gaps = 34/240 (14%)
Query: 333 IPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLV 392
+P + + L N+++ + F L L+L +N L + L L
Sbjct: 26 VPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 83
Query: 393 KLNLTGNKLSGKVP-TSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSG 451
+L+L+ N V +F L L L L L P + L LYLQ N L
Sbjct: 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ- 142
Query: 452 PVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPD-LGNL 510
+ ++ F L LT+L LH N+ + +P L
Sbjct: 143 -----------------ALPDDTFRD--------LGNLTHLFLHGNRIS-SVPERAFRGL 176
Query: 511 MQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS--GICQNLSKISLTGN 568
L+ L + +NR+ P L L+ L L N L +P + L + L N
Sbjct: 177 HSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 4e-21
Identities = 49/231 (21%), Positives = 77/231 (33%), Gaps = 33/231 (14%)
Query: 342 NLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKL 401
T + L +P Q ++L N+++ S + L L L N L
Sbjct: 12 PKVTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVL 68
Query: 402 SGKVPTSFGNLKELTHLDLSFNELDGQLPSS-LSNILNLVGLYLQHNKLSGPVDELFSNS 460
+ +F L L LDLS N + + + L L+L L
Sbjct: 69 ARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ---------- 118
Query: 461 AAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPD-LGNLMQLEYLDVS 519
+ LF G L+ L L L +N +P D +L L +L +
Sbjct: 119 --------ELGPGLFRG--------LAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLH 161
Query: 520 RNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS-GICQNLSKISLTGNK 569
NR+ L +L L L +NR+ + P + L + L N
Sbjct: 162 GNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 7e-18
Identities = 57/287 (19%), Positives = 88/287 (30%), Gaps = 67/287 (23%)
Query: 70 SISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGS 129
+ S L ++P + + + I L GN ++ F C NL+ L + N +
Sbjct: 15 TTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVL-AR 70
Query: 130 IPEY-LSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAAL 187
I + L L LDL N + + ++ L
Sbjct: 71 IDAAAFTGLALLEQLDLSDNAQLRSVDPATFH-----------------------GLGRL 107
Query: 188 ERLVLTNNMLKGHLPKEI-GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLS 246
L L L+ L + L+AL L L N + D +LT L L N +S
Sbjct: 108 HTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS 166
Query: 247 GLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLS 306
+ L L L+L N ++ FR ++ L
Sbjct: 167 SVPERAFRGLHSLDRLLLHQNRVA----HVHPHAFR--DLGRLM---------------- 204
Query: 307 GPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQL 353
L L N LS +L+ L L L L+ N
Sbjct: 205 --------------TLYLFANNLSALPTEALAPLRALQYLRLNDNPW 237
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 7e-17
Identities = 55/231 (23%), Positives = 82/231 (35%), Gaps = 34/231 (14%)
Query: 45 ESLLLSSNQFIGKIPPEI-GNCSMLKSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNLL 102
+ + L N+ I +P C L + L +N L+ I T LE++DL N
Sbjct: 35 QRIFLHGNR-ISHVPAASFRACRNLTILWLHSNVLA-RIDAAAFTGLALLEQLDLSDNAQ 92
Query: 103 TGTIE-GVFEKCSNLSQLVIFRNHIYGSIPEY-LSKLP-LMVLDLDSNNFTGIIPVSIWN 159
+++ F L L + R + + L L L L N +P +
Sbjct: 93 LRSVDPATFHGLGRLHTLHLDRCGL-QELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFR 150
Query: 160 SETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEI-GNLSALSVLDLNS 218
+ L L L N + +P+ L +L L L+
Sbjct: 151 -----------------------DLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQ 186
Query: 219 NLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNL 269
N + P+ D L TL L NNLS L E +A L LQ L L+ N
Sbjct: 187 NRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPW 237
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 8e-15
Identities = 51/227 (22%), Positives = 70/227 (30%), Gaps = 33/227 (14%)
Query: 2 LSFNALSGSLPEELSDLPILTF-AAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
L N +S LT N L+ + +E L LS N + + P
Sbjct: 39 LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDP 98
Query: 61 EI-GNCSMLKSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNLLTGTIEGVFEKCSNLSQ 118
L ++ L L + L +L+ + L N L + F NL+
Sbjct: 99 ATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 157
Query: 119 LVIFRNHIYGSIPEY-LSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGS 176
L + N I S+PE L L L L N + +
Sbjct: 158 LFLHGNRI-SSVPERAFRGLHSLDRLLLHQNRVAHV----------------HPHAFRD- 199
Query: 177 LPYEVGNAAALERLVLTNNMLKGHLPKEI-GNLSALSVLDLNSNLFD 222
L L L L N L LP E L AL L LN N +
Sbjct: 200 LG-------RLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDNPWV 238
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 8e-26
Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 29/214 (13%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHRE---FTA--EMETLGKVK 733
+ IG+G +G VYKA G+T A+KK+ + + E T E+ L ++K
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKI---RLEKEDEGIPSTTIREISILKELK 58
Query: 734 HQNLVPLLGYCSFDEEKLLVYEYMVNGSLDL--WLRNRTGSLEVLGWDKRYKIACGAA-- 789
H N+V L + +LV+E++ DL L G LE
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHL---DQDLKKLLDVCEGGLES------VTAKSFLLQL 109
Query: 790 -RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFG 848
G+A+ H ++HRD+K N+L+N E E K+ADFGLAR T T
Sbjct: 110 LNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEIVTLW 165
Query: 849 YIPPE--YGQSGRSTTRGDVYSFGVILLELVTGK 880
Y P+ G S + +T D++S G I E+V G
Sbjct: 166 YRAPDVLMG-SKKYSTTIDIWSVGCIFAEMVNGT 198
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 1e-25
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 30/217 (13%)
Query: 679 NNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHRE---FTA--EMETLGKV 732
+ K IG+G +GTV+KA + VA+K++ + E +A E+ L ++
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV---RLDDDDEGVPSSALREICLLKEL 58
Query: 733 KHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDL--WLRNRTGSLEVLGWDKRYKIACGAA- 789
KH+N+V L D++ LV+E+ DL + + G L+ +
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFC---DQDLKKYFDSCNGDLDP------EIVKSFLFQ 109
Query: 790 --RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF 847
+GL F H +++HRD+K N+L+N E K+A+FGLAR + T
Sbjct: 110 LLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVVTL 165
Query: 848 GYIPPE--YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
Y PP+ +G + +T D++S G I EL P
Sbjct: 166 WYRPPDVLFG-AKLYSTSIDMWSAGCIFAELANAGRP 201
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 2e-25
Identities = 59/215 (27%), Positives = 89/215 (41%), Gaps = 30/215 (13%)
Query: 679 NNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQ 735
+ K IG+G +G V+K G+ VA+KK +++ + A E+ L ++KH
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 736 NLVPLLGYCSFDEEKLLVYEYMVNGSLDL--WLRNRTGSLEVLGWDKRYKIACGAARGLA 793
NLV LL LV+EY + L + K + +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYC---DHTVLHELDRYQRGVP-EHLVKSITWQT--LQAVN 116
Query: 794 FLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
F H H IHRD+K NIL+ + K+ DFG ARL++ + D T Y P
Sbjct: 117 FCHKHN----CIHRDVKPENILITKHSVIKLCDFGFARLLTG-PSDYYDDEVATRWYRSP 171
Query: 853 E-------YGQSGRSTTRGDVYSFGVILLELVTGK 880
E YG DV++ G + EL++G
Sbjct: 172 ELLVGDTQYG------PPVDVWAIGCVFAELLSGV 200
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 4e-25
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 20/216 (9%)
Query: 675 LEATNNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTA--EMETLGK 731
+ +++ F + +G+G + TVYK G VA+K++ +G TA E+ + +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGT-PSTAIREISLMKE 59
Query: 732 VKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDL--WLRNRTGSLEVLGWDKRYKIACGAA 789
+KH+N+V L + + LV+E+M DL ++ +RT G + +
Sbjct: 60 LKHENIVRLYDVIHTENKLTLVFEFM---DNDLKKYMDSRTVGNTPRGLELN-LVKYFQW 115
Query: 790 ---RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGT 846
+GLAF H I+HRD+K N+L+N+ + K+ DFGLAR + + T
Sbjct: 116 QLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGI-PVNTFSSEVVT 171
Query: 847 FGYIPPE--YGQSGRSTTRGDVYSFGVILLELVTGK 880
Y P+ G S +T D++S G IL E++TGK
Sbjct: 172 LWYRAPDVLMG-SRTYSTSIDIWSCGCILAEMITGK 206
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 4e-25
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 679 NNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQ 735
+ ++G+G +G V K G+ VA+KK ++ + A E++ L +++H+
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE 84
Query: 736 NLVPLLGYCSFDEEKLLVYEYMVNGSLDL--WLRNRTGSLEVLGWDKRYKIACGAA---R 790
NLV LL C + LV+E++ + L L+ +
Sbjct: 85 NLVNLLEVCKKKKRWYLVFEFV---DHTILDDLELFPNGLDY------QVVQKYLFQIIN 135
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYI 850
G+ F H +IIHRDIK NIL+++ K+ DFG AR ++A V D T Y
Sbjct: 136 GIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA-PGEVYDDEVATRWYR 191
Query: 851 PPE--YGQSGRSTTRGDVYSFGVILLELVTGK 880
PE G + DV++ G ++ E+ G+
Sbjct: 192 APELLVG-DVKYGKAVDVWAIGCLVTEMFMGE 222
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 8e-25
Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 54/284 (19%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQNLVPLLGYC 744
+G G FG V+ G +K +++ ++Q E AE+E L + H N++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 745 SFDEEKL-LVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLAFLH 796
D + +V E G L + R + K + LA+ H
Sbjct: 90 E-DYHNMYIVMETCEGGELLE-----RI--VSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 797 -HGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
++H+D+K NIL + K+ DFGLA L ST+ AGT Y+ P
Sbjct: 142 SQH----VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK--SDEHSTNAAGTALYMAP 195
Query: 853 E-----YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907
E + D++S GV++ L+TG P F G +L V QK +
Sbjct: 196 EVFKRDVTF------KCDIWSAGVVMYFLLTGCLP----F---TGTSLEE-VQQKATYKE 241
Query: 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
++ LT + ++ +ML +P RP+ VL
Sbjct: 242 PNYAVECRPLTPQAVDLLKQMLTK-------DPERRPSAAQVLH 278
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 1e-24
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 25/212 (11%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQ 735
+ K + +G+G + TVYK VA+K++ +G TA E+ L +KH
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGA-PCTAIREVSLLKDLKHA 60
Query: 736 NLVPLLGYCSFDEEKLLVYEYMVNGSLDL--WLRNRTGSLEVLGWDKRYKIACGAA---R 790
N+V L ++ LV+EY+ DL +L + + + + + R
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYL---DKDLKQYLDDCGNIINM------HNVKLFLFQLLR 111
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYI 850
GLA+ H ++HRD+K N+L+NE E K+ADFGLAR S T + T Y
Sbjct: 112 GLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSI-PTKTYDNEVVTLWYR 167
Query: 851 PPE--YGQSGRSTTRGDVYSFGVILLELVTGK 880
PP+ G S +T+ D++ G I E+ TG+
Sbjct: 168 PPDILLG-STDYSTQIDMWGVGCIFYEMATGR 198
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-24
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHRE---FTA--EMETLGKV 732
+ K + +G+G F TVYKA + VA+KK+ ++ TA E++ L ++
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69
Query: 733 KHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDL--WLRNRTGSL---EVLGWDKRYKIACG 787
H N++ LL LV+++M DL +++ + L + K Y +
Sbjct: 70 SHPNIIGLLDAFGHKSNISLVFDFM---ETDLEVIIKDNSLVLTPSHI----KAYMLMT- 121
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF 847
+GL +LH + I+HRD+K +N+LL+E K+ADFGLA+ + T T
Sbjct: 122 -LQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGS-PNRAYTHQVVTR 176
Query: 848 GYIPPE--YGQSGRSTTRGDVYSFGVILLELVTGK 880
Y PE +G + D+++ G IL EL+
Sbjct: 177 WYRAPELLFG-ARMYGVGVDMWAVGCILAELLLRV 210
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-24
Identities = 61/281 (21%), Positives = 111/281 (39%), Gaps = 46/281 (16%)
Query: 685 NIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLL 741
+G G +G V A+K + + T + + E+ L + H N++ L
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 742 GYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLAF 794
+ D+ LV E G L + + ++ A + G+ +
Sbjct: 103 DFFE-DKRNYYLVMECYKGGEL----------FDEIIHRMKFNEVDAAVIIKQVLSGVTY 151
Query: 795 LHHGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
LH +I+HRD+K N+LL ++ K+ DFGL+ + + GT YI
Sbjct: 152 LHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE--NQKKMKERLGTAYYIA 206
Query: 852 PEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911
PE + + + DV+S GVIL L+ G P F G + +K++KG+
Sbjct: 207 PEVLR-KKYDEKCDVWSIGVILFILLAGYPP----FG---GQTDQE-ILRKVEKGKYTFD 257
Query: 912 LDP-TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
++ +K ++ +ML+ + R + L+
Sbjct: 258 SPEWKNVSEGAKDLIKQMLQF-------DSQRRISAQQALE 291
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 3e-24
Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 50/231 (21%)
Query: 679 NNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHRE---FTA--EMETLGKV 732
+ + K IG G FG V+KA G+ VA+KK+ + +E TA E++ L +
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQLL 73
Query: 733 KHQNLVPLLGYCSFDEEKL--------LVYEYMVNGSLDL--WLRNRTGSLEVLGWDKRY 782
KH+N+V L+ C LV+++ DL L N +
Sbjct: 74 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFC---EHDLAGLLSNVLVKFTL------S 124
Query: 783 KIACGAA---RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839
+I GL ++H I+HRD+KA+N+L+ + K+ADFGLAR S +
Sbjct: 125 EIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 181
Query: 840 STDIAG---TFGYIPPE-------YGQSGRSTTRGDVYSFGVILLELVTGK 880
T Y PPE YG D++ G I+ E+ T
Sbjct: 182 PNRYTNRVVTLWYRPPELLLGERDYG------PPIDLWGAGCIMAEMWTRS 226
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 7e-24
Identities = 55/212 (25%), Positives = 81/212 (38%), Gaps = 12/212 (5%)
Query: 341 TNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSL-GSLGGLVKLNLTGN 399
+ LDLS N L F +LQ L L ++ +I SL L L LTGN
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGN 86
Query: 400 KLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVGLYLQHNKL-SGPVDELF 457
+ +F L L L L L + L L L + HN + S + E F
Sbjct: 87 PIQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYF 145
Query: 458 SNSAAWKIATMNMSNNLF---DGGLPRSLGNLSYLT-NLDLHENKFTGEIPPDLGNLMQL 513
SN + +++S+N R L + L +LDL N I P ++L
Sbjct: 146 SNLT--NLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRL 202
Query: 514 EYLDVSRNRLCGQIPETMCSLSNLLYLSLAEN 545
+ L + N+L L++L + L N
Sbjct: 203 KELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 7e-23
Identities = 53/250 (21%), Positives = 84/250 (33%), Gaps = 48/250 (19%)
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293
S LDL N L L +LQ L LS + I
Sbjct: 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IED------------------ 69
Query: 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQL 353
G + LS L + L+L N + G+ S L++L L L
Sbjct: 70 --GAYQ----SLS-----HLST------LILTGNPIQSLALGAFSGLSSLQKLVAVETNL 112
Query: 354 TGPIPSE-FGDSIKLQGLYLGNNQLTGSIPWS--LGSLGGLVKLNLTGNKLSGKVPTSFG 410
+ + G L+ L + +N + S +L L L+L+ NK+ T
Sbjct: 113 AS-LENFPIGHLKTLKELNVAHNLIQ-SFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 170
Query: 411 NLKELT----HLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIA 466
L ++ LDLS N ++ + + L L L N+L D +F +
Sbjct: 171 VLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLT--SLQ 227
Query: 467 TMNMSNNLFD 476
+ + N +D
Sbjct: 228 KIWLHTNPWD 237
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 2e-20
Identities = 45/241 (18%), Positives = 82/241 (34%), Gaps = 44/241 (18%)
Query: 213 VLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGP 272
LDL+ N + Y L LDL + + L+ L L+L+ N +
Sbjct: 32 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS- 90
Query: 273 IPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGK 332
+ G F + L+ L+
Sbjct: 91 LAL--------------------GAFS---------------GLSSLQKLVAVETNLASL 115
Query: 333 IPGSLSRLTNLTTLDLSRNQLTG-PIPSEFGDSIKLQGLYLGNNQLTGSIP----WSLGS 387
+ L L L+++ N + +P F + L+ L L +N++ SI L
Sbjct: 116 ENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQ 174
Query: 388 LGGL-VKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQH 446
+ L + L+L+ N ++ P +F ++ L L L N+L + +L ++L
Sbjct: 175 MPLLNLSLDLSLNPMNFIQPGAFKEIR-LKELALDTNQLKSVPDGIFDRLTSLQKIWLHT 233
Query: 447 N 447
N
Sbjct: 234 N 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 5e-20
Identities = 53/254 (20%), Positives = 87/254 (34%), Gaps = 56/254 (22%)
Query: 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSN--------LFDGIIPYELGDCISLT 236
+ + L L+ N L+ + L VLDL+ + + L+
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLS--------HLS 79
Query: 237 TLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHG 296
TL L N + L + L+ LQ LV NL+ + + P ++ L +
Sbjct: 80 TLILTGNPIQSLALGAFSGLSSLQKLVAVETNLAS-LENFPIG-----HLKTLKEL---- 129
Query: 297 VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGP 356
++++N + S K+P S LTNL LDLS N++
Sbjct: 130 --NVAHNLIQ-----------------------SFKLPEYFSNLTNLEHLDLSSNKIQSI 164
Query: 357 IPSEFGDSIKLQG----LYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNL 412
++ ++ L L N + I L +L L N+L F L
Sbjct: 165 YCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLKELALDTNQLKSVPDGIFDRL 223
Query: 413 KELTHLDLSFNELD 426
L + L N D
Sbjct: 224 TSLQKIWLHTNPWD 237
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 6e-16
Identities = 53/273 (19%), Positives = 89/273 (32%), Gaps = 61/273 (22%)
Query: 81 SIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLM 140
IP L S + +DL N L F + +L +
Sbjct: 21 KIPDNL--PFSTKNLDLSFNPLRHLGSYSF---FSFPELQV------------------- 56
Query: 141 VLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGH 200
LDL I + S + L L+LT N ++
Sbjct: 57 -LDLSRCEIQ-TIEDGAYQSLS-----------------------HLSTLILTGNPIQ-S 90
Query: 201 LPKEI-GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKI-ADLAQ 258
L LS+L L + + +G +L L++ +N + + ++L
Sbjct: 91 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTN 150
Query: 259 LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVV 318
L+ L LS N + S + R + + + DLS N ++ I +
Sbjct: 151 LEHLDLSSNKIQ----SIYCTDLR--VLHQMPLLNLS--LDLSLNPMNF-IQPGAFKEIR 201
Query: 319 VVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRN 351
+ +L L+ N L G RLT+L + L N
Sbjct: 202 LKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 6e-16
Identities = 49/232 (21%), Positives = 80/232 (34%), Gaps = 37/232 (15%)
Query: 45 ESLLLSSNQFIGKIPPEI-GNCSMLKSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNLL 102
++L LS N + + + L+ + LS + +I S L + L GN +
Sbjct: 31 KNLDLSFNP-LRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPI 88
Query: 103 TGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYL-SKLP-LMVLDLDSNNFTGIIPVSIWNS 160
G F S+L +LV ++ S+ + L L L++ N
Sbjct: 89 QSLALGAFSGLSSLQKLVAVETNL-ASLENFPIGHLKTLKELNVAHNLIQSFKLPEY--- 144
Query: 161 ETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEI-GNLSALSV----LD 215
FS +L LE L L++N ++ + L + + LD
Sbjct: 145 -----FS--------NLT-------NLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLD 183
Query: 216 LNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHN 267
L+ N + I I L L L N L + L LQ + L N
Sbjct: 184 LSLNPMNF-IQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 9e-14
Identities = 39/173 (22%), Positives = 69/173 (39%), Gaps = 33/173 (19%)
Query: 393 KLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSL-SNILNLVGLYLQHNKLSG 451
L+L+ N L SF + EL LDLS E+ + ++ +L L L N +
Sbjct: 32 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQ- 89
Query: 452 PVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDL-GNL 510
+++ F G LS L L E + G+L
Sbjct: 90 -----------------SLALGAFSG--------LSSLQKLVAVETNLA-SLENFPIGHL 123
Query: 511 MQLEYLDVSRNRLCG-QIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSK 562
L+ L+V+ N + ++PE +L+NL +L L+ N+++ + + L +
Sbjct: 124 KTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIY-CTDLRVLHQ 174
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-23
Identities = 72/283 (25%), Positives = 120/283 (42%), Gaps = 49/283 (17%)
Query: 685 NIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQG---HREFTAEMETLGKVKHQNLVPL 740
++G G FG V G+ AVK +S+ + + E++ L ++ H N++ L
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 741 LGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLA 793
+ D+ LV E G L + + KR+ A R G+
Sbjct: 92 YEFFE-DKGYFYLVGEVYTGGEL----------FDEIISRKRFSEVDAARIIRQVLSGIT 140
Query: 794 FLH-HGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAGTFGY 849
++H + I+HRD+K N+LL +++ ++ DFGL+ + D GT Y
Sbjct: 141 YMHKNK----IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDKIGTAYY 194
Query: 850 IPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909
I PE G + DV+S GVIL L++G P F G N + +K++KG+
Sbjct: 195 IAPEVLH-GTYDEKCDVWSTGVILYILLSGCPP----FN---GANEYD-ILKKVEKGKYT 245
Query: 910 DVLDP-TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
L ++ +K ++ KML P+MR + L
Sbjct: 246 FELPQWKKVSESAKDLIRKMLTY-------VPSMRISARDALD 281
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 1e-23
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 32/218 (14%)
Query: 679 NNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHRE---FTA--EMETLGKV 732
+ + + +G+G +G VYKA +TVA+K++ + + E TA E+ L ++
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRI---RLEHEEEGVPGTAIREVSLLKEL 90
Query: 733 KHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA--- 789
+H+N++ L + L++EY DL ++ I
Sbjct: 91 QHRNIIELKSVIHHNHRLHLIFEYA---ENDL-----KKYMDKNPDVSMRVIKSFLYQLI 142
Query: 790 RGLAFLHHGFTPHIIHRDIKASNILLNEEFEA-----KVADFGLARLISACETHVSTDIA 844
G+ F H +HRD+K N+LL+ + K+ DFGLAR T
Sbjct: 143 NGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI-PIRQFTHEI 198
Query: 845 GTFGYIPPE--YGQSGRSTTRGDVYSFGVILLELVTGK 880
T Y PPE G S +T D++S I E++
Sbjct: 199 ITLWYRPPEILLG-SRHYSTSVDIWSIACIWAEMLMKT 235
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 1e-23
Identities = 74/286 (25%), Positives = 121/286 (42%), Gaps = 56/286 (19%)
Query: 685 NIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLL 741
++G G FG V K + AVK +++A + E+E L K+ H N++ L
Sbjct: 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 742 GYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLAF 794
D +V E G L + + KR+ A + G+ +
Sbjct: 88 EILE-DSSSFYIVGELYTGGEL----------FDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 795 LHHGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
+H +I+HRD+K NILL ++ + K+ DFGL+ + D GT YI
Sbjct: 137 MHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRIGTAYYIA 191
Query: 852 PE-----YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906
PE Y + DV+S GVIL L++G P F G N + ++++ G
Sbjct: 192 PEVLRGTYDEK------CDVWSAGVILYILLSGTPP----FY---GKNEYD-ILKRVETG 237
Query: 907 QAADVLDP-TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+ A L ++ D+K ++ KML +P++R T L+
Sbjct: 238 KYAFDLPQWRTISDDAKDLIRKMLTF-------HPSLRITATQCLE 276
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 48/258 (18%), Positives = 85/258 (32%), Gaps = 36/258 (13%)
Query: 712 SQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTG 771
+ + ++ + +N V L S + + +L W+ R
Sbjct: 98 PLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS 157
Query: 772 SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831
+ I A + FLH ++HRD+K SNI + KV DFGL
Sbjct: 158 LED-REHGVCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTA 213
Query: 832 I-----------SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK 880
+ T GT Y+ PE + + D++S G+IL EL+
Sbjct: 214 MDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSF 273
Query: 881 EPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNP 940
T E + ++ + + P M++ D LS +P
Sbjct: 274 -STQMERVR---------IITDVRNLKFPLLFT------QKYPQEHMMVQ---DMLSPSP 314
Query: 941 AMRPTMLHVLK--FLKEI 956
RP +++ + +
Sbjct: 315 TERPEATDIIENAIFENL 332
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 2e-05
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQN 736
+F +G GGFG V++A D A+K++ + RE E++ L K++H
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65
Query: 737 LV 738
+V
Sbjct: 66 IV 67
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-23
Identities = 69/292 (23%), Positives = 112/292 (38%), Gaps = 57/292 (19%)
Query: 685 NIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA-------------EMETLG 730
+G G +G V A+K + +++ R E+ L
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 731 KVKHQNLVPLLGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY------K 783
+ H N++ L D++ LV E+ G L + NR ++
Sbjct: 102 SLDHPNIIKLFDVFE-DKKYFYLVTEFYEGGELFEQIINR----------HKFDECDAAN 150
Query: 784 IACGAARGLAFLHHGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVS 840
I G+ +LH +I+HRDIK NILL N K+ DFGL+ S + +
Sbjct: 151 IMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS--KDYKL 205
Query: 841 TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900
D GT YI PE + + DV+S GVI+ L+ G P F G N +
Sbjct: 206 RDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPP----FG---GQNDQD-II 256
Query: 901 QKMKKGQAADVLDP-TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+K++KG+ + ++ ++K ++ ML + R T L
Sbjct: 257 KKVEKGKYYFDFNDWKNISDEAKELIKLMLTY-------DYNKRCTAEEALN 301
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 99 bits (250), Expect = 3e-23
Identities = 61/289 (21%), Positives = 101/289 (34%), Gaps = 66/289 (22%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
IG G +G V A A KK+ + + F E+E + + H N++ L
Sbjct: 16 TIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 75
Query: 745 SFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLAFLH- 796
D + LV E G L E + + + A + +A+ H
Sbjct: 76 E-DNTDIYLVMELCTGGEL----------FERVVHKRVFRESDAARIMKDVLSAVAYCHK 124
Query: 797 HGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE 853
+ HRD+K N L + + K+ DFGLA + GT Y+ P+
Sbjct: 125 LN----VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK--PGKMMRTKVGTPYYVSPQ 178
Query: 854 -----YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908
YG D +S GV++ L+ G P F V K+++G
Sbjct: 179 VLEGLYGP------ECDEWSAGVMMYVLLCGYPP----FS---APTDSE-VMLKIREGT- 223
Query: 909 ADVLD------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
V + ++ ++ ++L +P R T L L+
Sbjct: 224 ---FTFPEKDWLNV-SPQAESLIRRLLTK-------SPKQRITSLQALE 261
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 3e-23
Identities = 57/320 (17%), Positives = 116/320 (36%), Gaps = 39/320 (12%)
Query: 183 NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGN 242
A ++ + + +L ++ L I + +L L+L +
Sbjct: 17 ALANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGVTTIEG--VQYLNNLIGLELKD 72
Query: 243 NNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSY 302
N ++ L P + +L ++ L LS N L A + + + DL+
Sbjct: 73 NQITDLAP--LKNLTKITELELSGNPLKNVSA--------IAGLQSIKTL------DLTS 116
Query: 303 NRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFG 362
+++ P L + L L+ N ++ I L+ LTNL L + Q++ +
Sbjct: 117 TQITDVTP--LAGLSNLQVLYLDLNQIT-NISP-LAGLTNLQYLSIGNAQVSDL--TPLA 170
Query: 363 DSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSF 422
+ KL L +N+++ I L SL L++++L N++S + N L + L+
Sbjct: 171 NLSKLTTLKADDNKIS-DIS-PLASLPNLIEVHLKNNQISDV--SPLANTSNLFIVTLTN 226
Query: 423 NELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRS 482
+ Q +N++ + P S++ ++ L
Sbjct: 227 QTITNQPVFYNNNLVVPNVVKGPSGAPIAPAT--ISDNG-------TYASPNLTWNLTSF 277
Query: 483 LGNLSYLTNLDLHENKFTGE 502
+ N+SY N + T
Sbjct: 278 INNVSYTFNQSVTFKNTTVP 297
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 97.1 bits (242), Expect = 4e-22
Identities = 55/304 (18%), Positives = 109/304 (35%), Gaps = 61/304 (20%)
Query: 242 NNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLS 301
++ + P LA + +N++ + QA++ ++ +
Sbjct: 6 PTAINVIFP--DPALANAIKIAAGKSNVTDTVT--------QADLDGITTL------SAF 49
Query: 302 YNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEF 361
++ E + ++ L L +N ++ + L LT +T L+LS N L S
Sbjct: 50 GTGVTTI--EGVQYLNNLIGLELKDNQIT-DLAP-LKNLTKITELELSGNPLK--NVSAI 103
Query: 362 GDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLS 421
++ L L + Q+T P L L L L L N+++ P L L +L +
Sbjct: 104 AGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIG 159
Query: 422 FNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPR 481
++ + L+N+ L L NK+S ++S
Sbjct: 160 NAQVSD--LTPLANLSKLTTLKADDNKIS------------------DISP--------- 190
Query: 482 SLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLS 541
L +L L + L N+ + P L N L + ++ + Q +NL+ +
Sbjct: 191 -LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPVF---YNNNLVVPN 244
Query: 542 LAEN 545
+ +
Sbjct: 245 VVKG 248
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 94.0 bits (234), Expect = 5e-21
Identities = 48/233 (20%), Positives = 97/233 (41%), Gaps = 19/233 (8%)
Query: 337 LSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNL 396
L N + ++ +T + D + L +T +I + L L+ L L
Sbjct: 15 DPALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLEL 70
Query: 397 TGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDEL 456
N+++ NL ++T L+LS N L S+++ + ++ L L +++ ++
Sbjct: 71 KDNQIT--DLAPLKNLTKITELELSGNPLKN--VSAIAGLQSIKTLDLTSTQIT----DV 122
Query: 457 FSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYL 516
+ + + + N P L L+ L L + + + ++ P L NL +L L
Sbjct: 123 TPLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVS-DLTP-LANLSKLTTL 178
Query: 517 DVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNK 569
N++ I + SL NL+ + L N++ + P + NL ++LT
Sbjct: 179 KADDNKIS-DISP-LASLPNLIEVHLKNNQISDVSPLAN-TSNLFIVTLTNQT 228
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 87.1 bits (216), Expect = 1e-18
Identities = 63/337 (18%), Positives = 115/337 (34%), Gaps = 59/337 (17%)
Query: 90 ESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNN 148
+ +I + +T T+ ++ L F + +I + L L+ L+L N
Sbjct: 19 ANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGV-TTIEG-VQYLNNLIGLELKDNQ 74
Query: 149 FTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNL 208
T + P+ N + L L+ N LK I L
Sbjct: 75 ITDLAPLK--------------------------NLTKITELELSGNPLKN--VSAIAGL 106
Query: 209 SALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNN 268
++ LDL S + P L +L L L N ++ + P +A L LQ L + +
Sbjct: 107 QSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQ 162
Query: 269 LSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNM 328
+S ++ L+ + N++S L S ++++ L NN
Sbjct: 163 VS--------------DLTPLANLSKLTTLKADDNKISDI--SPLASLPNLIEVHLKNNQ 206
Query: 329 LSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSL 388
+S P L+ +NL + L+ +T + + + P ++
Sbjct: 207 ISDVSP--LANTSNLFIVTLTNQTITNQPVFYNNNLVVP--NVVKGPSGAPIAPATISDN 262
Query: 389 GGLVKLNLTGNKLS--GKVPTSFGNLKELTHLDLSFN 423
G NLT N S V +F + + F+
Sbjct: 263 GTYASPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFS 299
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 2e-15
Identities = 44/248 (17%), Positives = 90/248 (36%), Gaps = 19/248 (7%)
Query: 27 KNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPREL 86
K+ ++ ++ + + + +L + I + + L + L +N ++ + L
Sbjct: 28 KSNVTDTVT--QADLDGITTLSAFGTG-VTTIEG-VQYLNNLIGLELKDNQIT-DLA-PL 81
Query: 87 CTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLD 145
+ E++L GN L + ++ L + I + L+ L L VL LD
Sbjct: 82 KNLTKITELELSGNPLK-NVSA-IAGLQSIKTLDLTSTQI--TDVTPLAGLSNLQVLYLD 137
Query: 146 SNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEI 205
N T I P++ L S N + L + N + L L +N + + +
Sbjct: 138 LNQITNISPLA--GLTNLQYLSIGNAQVS-DLT-PLANLSKLTTLKADDNKIS-DIS-PL 191
Query: 206 GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLS 265
+L L + L +N + P L + +L + L N ++ +L +
Sbjct: 192 ASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVVKGP 249
Query: 266 HNNLSGPI 273
P
Sbjct: 250 SGAPIAPA 257
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 4e-07
Identities = 31/163 (19%), Positives = 67/163 (41%), Gaps = 12/163 (7%)
Query: 2 LSFNALSGSLPEELSDLPILT-FAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
L+ ++ L+ L L + NQ++ ++ L ++ L + + Q + + P
Sbjct: 114 LTSTQITD--VTPLAGLSNLQVLYLDLNQIT-NISP-LAGLTNLQYLSIGNAQ-VSDLTP 168
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
+ N S L ++ +N +S I L + +L E+ L N ++ + SNL +
Sbjct: 169 -LANLSKLTTLKADDNKIS-DIS-PLASLPNLIEVHLKNNQIS-DVSP-LANTSNLFIVT 223
Query: 121 IFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETL 163
+ I Y + L ++ + + I P +I ++ T
Sbjct: 224 LTNQTITNQPVFYNNNL-VVPNVVKGPSGAPIAPATISDNGTY 265
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 4e-23
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 685 NIIGDGGFGTVYKAA-LPDGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPL 740
IG G G V A + VA+KKLS+ +T R + E+ + V H+N++ L
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 126
Query: 741 L------GYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYK-IACGAARGLA 793
L ++ LV E M +L + +R + G+
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELM---DANLCQVIQMEL-----DHERMSYLLYQMLCGIK 178
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE 853
LH IIHRD+K SNI++ + K+ DFGLAR +A + + T T Y PE
Sbjct: 179 HLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPE 233
Query: 854 YGQSGRSTTRGDVYSFGVILLELVTGK 880
D++S G I+ E+V K
Sbjct: 234 VILGMGYKENVDIWSVGCIMGEMVRHK 260
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 5e-23
Identities = 59/242 (24%), Positives = 95/242 (39%), Gaps = 44/242 (18%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA--------EMETLGKVKHQNL 737
+G G G V A K VA++ +S+ K A E+E L K+ H +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 738 VPLLGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAAR----GL 792
+ + + FD E +V E M G L + E +
Sbjct: 203 IKIKNF--FDAEDYYIVLELMEGGELFDKVVGNKRLKE--------ATCKLYFYQMLLAV 252
Query: 793 AFLH-HGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAGTFG 848
+LH +G IIHRD+K N+LL E+ K+ DFG ++++ ET + + GT
Sbjct: 253 QYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPT 306
Query: 849 YIPPEYGQSGRSTTRG---DVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK 905
Y+ PE S + D +S GVIL ++G P + + ++
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-------LKDQITS 359
Query: 906 GQ 907
G+
Sbjct: 360 GK 361
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 5e-23
Identities = 66/316 (20%), Positives = 101/316 (31%), Gaps = 70/316 (22%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVK-----KLSQAKTQGHREFTAEMETLGKVKHQNLVPL 740
IG G +G V A A+K K+ Q + E+ + K+ H N+ L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACG------------- 787
++ LV E G L L K
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 788 ----------------AAR-------GLAFLH-HGFTPHIIHRDIKASNILL--NEEFEA 821
+ L +LH G I HRDIK N L N+ FE
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG----ICHRDIKPENFLFSTNKSFEI 209
Query: 822 KVADFGLARLISAC---ETHVSTDIAGTFGYIPPE--YGQSGRSTTRGDVYSFGVILLEL 876
K+ DFGL++ E + T AGT ++ PE + + D +S GV+L L
Sbjct: 210 KLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLL 269
Query: 877 VTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP-TVLTADSKPMMLKMLRIAGDC 935
+ G P F G N ++ + VL+ ++ ++ +L
Sbjct: 270 LMGAVP----F---PGVNDAD-TISQVLNKKLCFENPNYNVLSPLARDLLSNLLNR---- 317
Query: 936 LSDNPAMRPTMLHVLK 951
N R + L+
Sbjct: 318 ---NVDERFDAMRALQ 330
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 5e-23
Identities = 53/266 (19%), Positives = 97/266 (36%), Gaps = 30/266 (11%)
Query: 187 LERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLS 246
+ + + +K P + +L + + S+ + N+++
Sbjct: 1 MGETITVSTPIKQIFP--DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK 56
Query: 247 GLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLS 306
+ + I L + L L+ N L+ ++ L+ +++ G L N++
Sbjct: 57 SV--QGIQYLPNVTKLFLNGNKLT--------------DIKPLTNLKNLGWLFLDENKIK 100
Query: 307 GPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK 366
L + L L +N +S I G L L L +L L N++T K
Sbjct: 101 --DLSSLKDLKKLKSLSLEHNGIS-DING-LVHLPQLESLYLGNNKITDITV--LSRLTK 154
Query: 367 LQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELD 426
L L L +NQ++ I L L L L L+ N +S + LK L L+L E
Sbjct: 155 LDTLSLEDNQIS-DIV-PLAGLTKLQNLYLSKNHIS--DLRALAGLKNLDVLELFSQECL 210
Query: 427 GQLPSSLSNILNLVGLYLQHNKLSGP 452
+ + SN++ + L P
Sbjct: 211 NKPINHQSNLVVPNTVKNTDGSLVTP 236
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 95.9 bits (238), Expect = 1e-20
Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 43/249 (17%)
Query: 321 DLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGS 380
+ + + + +I +L + +T + + + + N+ + S
Sbjct: 3 ETITVSTPIK-QIFP-DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-S 57
Query: 381 IPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLV 440
+ + L + KL L GNKL+ P NLK L L L N++ L SSL ++ L
Sbjct: 58 VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIK-DL-SSLKDLKKLK 112
Query: 441 GLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFT 500
L L+HN +S +++ L +L L +L L NK T
Sbjct: 113 SLSLEHNGIS------------------DING----------LVHLPQLESLYLGNNKIT 144
Query: 501 GEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNL 560
+I L L +L+ L + N++ I + L+ L L L++N + + +G +NL
Sbjct: 145 -DITV-LSRLTKLDTLSLEDNQIS-DIVP-LAGLTKLQNLYLSKNHISDLRALAG-LKNL 199
Query: 561 SKISLTGNK 569
+ L +
Sbjct: 200 DVLELFSQE 208
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 87.5 bits (216), Expect = 7e-18
Identities = 50/304 (16%), Positives = 104/304 (34%), Gaps = 29/304 (9%)
Query: 134 LSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVL 192
+ +L + T + + ++ + A N+ ++ S+ + + +L L
Sbjct: 17 DDAFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFL 72
Query: 193 TNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEK 252
N L + K + NL L L L+ N + L D L +L L +N +S +
Sbjct: 73 NGNKLT-DI-KPLTNLKNLGWLFLDENKIKDLSS--LKDLKKLKSLSLEHNGISDI--NG 126
Query: 253 IADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEE 312
+ L QL+ L L +N ++ + + L + L N++S
Sbjct: 127 LVHLPQLESLYLGNNKITDITV--------LSRLTKLDTL------SLEDNQISDI--VP 170
Query: 313 LGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYL 372
L + +L L+ N +S + L+ L NL L+L + + + + +
Sbjct: 171 LAGLTKLQNLYLSKNHIS-DLRA-LAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKN 228
Query: 373 GNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSS 432
+ L S + + + +V F + F+ Q
Sbjct: 229 TDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLKE 288
Query: 433 LSNI 436
+ +
Sbjct: 289 VYTV 292
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 58.2 bits (140), Expect = 8e-09
Identities = 33/170 (19%), Positives = 58/170 (34%), Gaps = 10/170 (5%)
Query: 13 EELSDLPILT-FAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSI 71
L DL L + E N +S + L + Q+ESL L +N+ I I + + L ++
Sbjct: 103 SSLKDLKKLKSLSLEHNGIS-DING-LVHLPQLESLYLGNNK-ITDITV-LSRLTKLDTL 158
Query: 72 SLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIP 131
SL +N +S I L L+ + L N ++ + NL L +F
Sbjct: 159 SLEDNQIS-DIV-PLAGLTKLQNLYLSKNHIS-DLRA-LAGLKNLDVLELFSQECLNKPI 214
Query: 132 EYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180
+ S L + + +S + +
Sbjct: 215 NHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFI 264
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 99 bits (249), Expect = 6e-23
Identities = 58/300 (19%), Positives = 95/300 (31%), Gaps = 34/300 (11%)
Query: 206 GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPE---KIADLAQLQCL 262
G S +L D ++ +SL L + + I ++ ++ LQ L
Sbjct: 41 GGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQEL 100
Query: 263 VLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDL 322
L + ++G P +A PDL+ + V + + + + L + V L
Sbjct: 101 TLENLEVTGTAPPPLL----EATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKV--L 154
Query: 323 LLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIP 382
+ + L+TLDLS N G ++ P
Sbjct: 155 SIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGL-----------------ISALCP 197
Query: 383 WSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVG 441
+L L N SG +L LDLS N L + + L
Sbjct: 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNS 257
Query: 442 LYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTG 501
L L L L + ++ +++S N D P L + NL L N F
Sbjct: 258 LNLSFTGLKQVPKGLPAK-----LSVLDLSYNRLDR-NPSPDE-LPQVGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 99.6 bits (248), Expect = 6e-23
Identities = 49/263 (18%), Positives = 78/263 (29%), Gaps = 19/263 (7%)
Query: 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPS---EFGDSIKLQGLYLGNNQLT 378
L + + + +L L + ++ I LQ L L N ++T
Sbjct: 49 LKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVT 108
Query: 379 GSIPWSLGSLGG--LVKLNLTGNKLSG--KVPTSFGNLKE--LTHLDLSFNELDGQLPSS 432
G+ P L G L LNL + + L L ++
Sbjct: 109 GTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQ 168
Query: 433 LSNILNLVGLYLQHNKLSG--PVDELFSNSAAWKIATMNMSNNLF---DGGLPRSLGNLS 487
+ L L L N G + + + + N G
Sbjct: 169 VRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARV 228
Query: 488 YLTNLDLHENKFTGEIPPDLGNLMQ-LEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENR 546
L LDL N + L L++S L Q+P+ + L L L+ NR
Sbjct: 229 QLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGL-KQVPK--GLPAKLSVLDLSYNR 285
Query: 547 LEGMVPRSGICQNLSKISLTGNK 569
L+ P + +SL GN
Sbjct: 286 LDR-NPSPDELPQVGNLSLKGNP 307
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 98.0 bits (244), Expect = 2e-22
Identities = 63/320 (19%), Positives = 96/320 (30%), Gaps = 43/320 (13%)
Query: 113 CSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNL 172
S + L +YG L + + D FT II T+ + +
Sbjct: 25 SSAFNCLGAADVELYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRI 84
Query: 173 LEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLN-SNLFDGIIPYELGD 231
L G+L V + L+ L L N + G P + + + LN N+ L +
Sbjct: 85 LFGAL--RVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAE 142
Query: 232 CI-----SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANM 286
L L + + E++ L L LS N G + +
Sbjct: 143 LQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLK--F 200
Query: 287 PDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTL 346
P L L + SG + L L
Sbjct: 201 PTLQV------LALRNAGM---------------------ETPSGVCSALAAARVQLQGL 233
Query: 347 DLSRNQLTG-PIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKV 405
DLS N L +L L L L +P L + L L+L+ N+L
Sbjct: 234 DLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPA--KLSVLDLSYNRLDR-N 289
Query: 406 PTSFGNLKELTHLDLSFNEL 425
P S L ++ +L L N
Sbjct: 290 P-SPDELPQVGNLSLKGNPF 308
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 95.0 bits (236), Expect = 2e-21
Identities = 59/312 (18%), Positives = 95/312 (30%), Gaps = 60/312 (19%)
Query: 159 NSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPK---EIGNLSALSVLD 215
+ + ++ + +L+RL + + + + +S L L
Sbjct: 42 GRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELT 101
Query: 216 LNSNLFDGIIPYELGDCI--SLTTLDLGNNNLSGLIPEKIADLAQ-----LQCLVLSHNN 268
L + G P L + L L+L N + + +A+L Q L+ L ++ +
Sbjct: 102 LENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAH 160
Query: 269 LSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVD----LLL 324
+ P LS + DLS N G C + L L
Sbjct: 161 SLN-FSCEQVR-----VFPALSTL------DLSDNPELGERGLISALCPLKFPTLQVLAL 208
Query: 325 NNNM---LSGKIPGSLSRLTNLTTLDLSRNQLTG-PIPSEFGDSIKLQGLYLGNNQLTGS 380
N SG + L LDLS N L +L L L L
Sbjct: 209 RNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-Q 267
Query: 381 IPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLV 440
+P L + +L+ LDLS+N LD PS + +
Sbjct: 268 VPKGLPA--------------------------KLSVLDLSYNRLDR-NPSPDE-LPQVG 299
Query: 441 GLYLQHNKLSGP 452
L L+ N
Sbjct: 300 NLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 92.3 bits (229), Expect = 2e-20
Identities = 51/243 (20%), Positives = 83/243 (34%), Gaps = 20/243 (8%)
Query: 322 LLLNNNMLSGKIPGSLSRL---TNLTTLDLSRNQLTGPIPSEFGDSI--KLQGLYLGNNQ 376
L + + +I R+ + L L L ++TG P ++ L L L N
Sbjct: 73 LTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVS 132
Query: 377 LTGSIPWSLG----SLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSS 432
W GL L++ L+ LDLS N G+
Sbjct: 133 WATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192
Query: 433 LSNIL----NLVGLYLQHNKLSGPVDELFSNSAAWK-IATMNMSNNLFDGGLPRSL-GNL 486
+ L L L++ + P + +AA + +++S+N
Sbjct: 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP 252
Query: 487 SYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENR 546
S L +L+L ++P L +L LD+S NRL + P L + LSL N
Sbjct: 253 SQLNSLNLSFTGLK-QVPKGLPA--KLSVLDLSYNRL-DRNPSPD-ELPQVGNLSLKGNP 307
Query: 547 LEG 549
Sbjct: 308 FLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 92.3 bits (229), Expect = 2e-20
Identities = 61/284 (21%), Positives = 96/284 (33%), Gaps = 34/284 (11%)
Query: 91 SLEEIDLDGNLLTGTIEGV-FEKCSNLSQLVIFRNHIYGSIPEYLSKL----PLMVLDLD 145
SLE + + + K +L +L + I I ++ L L L+
Sbjct: 44 SLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLE 103
Query: 146 SNNFTGIIPVSI--WNSETLMEFSAANNLLEG--SLPYEVGN--AAALERLVLTNNMLKG 199
+ TG P + L + N + E+ L+ L +
Sbjct: 104 NLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLN 163
Query: 200 HLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCI----SLTTLDLGNNN---LSGLIPEK 252
+++ ALS LDL+ N G C +L L L N SG+
Sbjct: 164 FSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSAL 223
Query: 253 IADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEE 312
A QLQ L LSHN+L + L+ + +LS+ L +P+
Sbjct: 224 AAARVQLQGLDLSHNSLRDAAGAP-----SCDWPSQLNSL------NLSFTGLKQ-VPKG 271
Query: 313 LGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGP 356
L + + V+DL + N L P S L + L L N
Sbjct: 272 LPAKLSVLDL--SYNRLDR-NP-SPDELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 77.6 bits (191), Expect = 2e-15
Identities = 43/285 (15%), Positives = 79/285 (27%), Gaps = 45/285 (15%)
Query: 5 NALSGSLPEELSDLPILTFAAEKNQLSGSLPSW---LGNWNQMESLLLSSNQFIGKIPPE 61
A G + + L + ++ + + + ++ L L + + G PP
Sbjct: 55 EADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114
Query: 62 IGNCSM--LKSISLSNNFLSGSIPR----ELCTSESLEEIDLDGNLLTGTIEGVFEKCSN 115
+ + L ++L N + + L+ + +
Sbjct: 115 LLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174
Query: 116 LSQLVIFRNHIYGSIPEYLSKLP-----LMVLDLDSNNFTGIIPVSIWNSETLMEFSAAN 170
LS L + N G + P L VL L +
Sbjct: 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGM--------------------- 213
Query: 171 NLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEI-GNLSALSVLDLNSNLFDGIIPYEL 229
G L+ L L++N L+ S L+ L+L+ +
Sbjct: 214 ETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPK--- 270
Query: 230 GDCI--SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGP 272
+ L+ LDL N L +L Q+ L L N
Sbjct: 271 --GLPAKLSVLDLSYNRLDRN--PSPDELPQVGNLSLKGNPFLDS 311
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 8e-23
Identities = 58/238 (24%), Positives = 90/238 (37%), Gaps = 40/238 (16%)
Query: 335 GSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKL 394
+S++ + ++ + LT +P L+L N L +L L +L
Sbjct: 4 CEVSKVASHLEVNCDKRNLTA-LPP--DLPKDTTILHLSENLLYTFSLATLMPYTRLTQL 60
Query: 395 NLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVD 454
NL +L+ K+ G L L LDLS N+L LP + L L + N+L+
Sbjct: 61 NLDRAELT-KLQV-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT---- 113
Query: 455 ELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDL-GNLMQL 513
++ G L L L L N+ +PP L +L
Sbjct: 114 --------------SLPLGALRG--------LGELQELYLKGNELK-TLPPGLLTPTPKL 150
Query: 514 EYLDVSRNRLCGQIPETMC-SLSNLLYLSLAENRLEGMVPRSGICQNLS--KISLTGN 568
E L ++ N L ++P + L NL L L EN L +P+ G + L GN
Sbjct: 151 EKLSLANNNL-TELPAGLLNGLENLDTLLLQENSLY-TIPK-GFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 7e-22
Identities = 53/200 (26%), Positives = 74/200 (37%), Gaps = 30/200 (15%)
Query: 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSI 381
L L+ N+L +L T LT L+L R +LT G L L L +NQL S+
Sbjct: 36 LHLSENLLYTFSLATLMPYTRLTQLNLDRAELT--KLQVDGTLPVLGTLDLSHNQLQ-SL 92
Query: 382 PWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVG 441
P +L L L+++ N+L+ + L EL L L NEL P L+ L
Sbjct: 93 PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK 152
Query: 442 LYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTG 501
L L +N L+ + L + L L L L EN
Sbjct: 153 LSLANNNLT------------------ELPAGLLN--------GLENLDTLLLQENSLYT 186
Query: 502 EIPPDLGNLMQLEYLDVSRN 521
IP L + + N
Sbjct: 187 -IPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 90.9 bits (226), Expect = 4e-20
Identities = 50/191 (26%), Positives = 70/191 (36%), Gaps = 18/191 (9%)
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293
T L L N L + +L L L L+ + +P L +
Sbjct: 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-------GTLPVLGTL- 82
Query: 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQL 353
DLS+N+L +P + + L ++ N L+ G+L L L L L N+L
Sbjct: 83 -----DLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL 136
Query: 354 TGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSL-GSLGGLVKLNLTGNKLSGKVPTSFGNL 412
P + KL+ L L NN LT +P L L L L L N L FG+
Sbjct: 137 KTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSH 195
Query: 413 KELTHLDLSFN 423
L L N
Sbjct: 196 L-LPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 1e-14
Identities = 49/213 (23%), Positives = 73/213 (34%), Gaps = 27/213 (12%)
Query: 65 CSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRN 124
S ++ L+ ++P +L + L NLL + L+QL + R
Sbjct: 10 AS-HLEVNCDKRNLT-ALPPDLPKD--TTILHLSENLLYTFSLATLMPYTRLTQLNLDRA 65
Query: 125 HIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEV-GN 183
+ + + L LDL N +P+ L + N L SLP
Sbjct: 66 EL-TKLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT-SLPLGALRG 122
Query: 184 AAALERLVLTNNMLKGHLPKEI-GNLSALSVLDLNSN--------LFDGIIPYELGDCIS 234
L+ L L N LK LP + L L L +N L +G+ +
Sbjct: 123 LGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGL--------EN 173
Query: 235 LTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHN 267
L TL L N+L IP+ L L N
Sbjct: 174 LDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 4e-10
Identities = 45/198 (22%), Positives = 74/198 (37%), Gaps = 33/198 (16%)
Query: 28 NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELC 87
N L + L + ++ L L + + K+ + G +L ++ LS+N L S+P
Sbjct: 41 NLLYTFSLATLMPYTRLTQLNLDRAE-LTKLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQ 97
Query: 88 TSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPE-YLSKLP-LMVLDLD 145
T +L +D+ N LT G L +L + N + ++P L+ P L L L
Sbjct: 98 TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL-KTLPPGLLTPTPKLEKLSLA 156
Query: 146 SNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEV-GNAAALERLVLTNNMLKGHLPKE 204
+NN T LP + L+ L+L N L +PK
Sbjct: 157 NNNLT-------------------------ELPAGLLNGLENLDTLLLQENSLY-TIPKG 190
Query: 205 IGNLSALSVLDLNSNLFD 222
L L+ N +
Sbjct: 191 FFGSHLLPFAFLHGNPWL 208
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 7e-08
Identities = 44/174 (25%), Positives = 67/174 (38%), Gaps = 10/174 (5%)
Query: 2 LSFNALSGSLPEELSDLPILTFAA-EKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
LS N L L LT ++ +L+ L G + +L LS NQ + +P
Sbjct: 38 LSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVD-GTLPVLGTLDLSHNQ-LQSLPL 94
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNLLTGTIEGVFEKCSNLSQL 119
L + +S N L+ S+P L+E+ L GN L G+ L +L
Sbjct: 95 LGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153
Query: 120 VIFRNHIYGSIPEYL-SKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANN 171
+ N++ +P L + L L L L N+ IP + S L N
Sbjct: 154 SLANNNL-TELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGN 205
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 1e-22
Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 55/227 (24%)
Query: 687 IGDGGFGTVYKA---ALPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQNLVPLL 741
+G G +G VYKA D K A+K++ + G +A E+ L ++KH N++ L
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQI---EGTG-ISMSACREIALLRELKHPNVISLQ 84
Query: 742 G-YCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA---------- 789
+ S + K+ L+++Y DLW ++ K K
Sbjct: 85 KVFLSHADRKVWLLFDYA---EHDLW-----HIIKFHRASKANKKPVQLPRGMVKSLLYQ 136
Query: 790 --RGLAFLHHGFTPHIIHRDIKASNILLNEEFEA----KVADFGLARLISA---CETHVS 840
G+ +LH ++HRD+K +NIL+ E K+AD G ARL ++ +
Sbjct: 137 ILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLD 193
Query: 841 TDIAGTFGYIPPE-------YGQSGRSTTRGDVYSFGVILLELVTGK 880
+ TF Y PE Y T D+++ G I EL+T +
Sbjct: 194 PVVV-TFWYRAPELLLGARHY------TKAIDIWAIGCIFAELLTSE 233
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 1e-22
Identities = 74/290 (25%), Positives = 120/290 (41%), Gaps = 66/290 (22%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHRE--FTAEMETLGKVKHQNLVPLLG 742
++G G FG V K + AVK +++A + E+E L K+ H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLAFLH 796
+V E G L + R KR+ A + G+ ++H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKR----------KRFSEHDAARIIKQVFSGITYMH 138
Query: 797 -HGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
H I+HRD+K NILL ++ + K+ DFGL+ + D GT YI P
Sbjct: 139 KHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRIGTAYYIAP 192
Query: 853 E-----YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907
E Y + + DV+S GVIL L++G P F G N + ++++ G+
Sbjct: 193 EVLRGTYDE------KCDVWSAGVILYILLSGTPP----F---YGKNEYD-ILKRVETGK 238
Query: 908 AADVLD------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
T+ + D+K ++ KML +P++R T L+
Sbjct: 239 ----YAFDLPQWRTI-SDDAKDLIRKMLTF-------HPSLRITATQCLE 276
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 1e-22
Identities = 61/290 (21%), Positives = 110/290 (37%), Gaps = 70/290 (24%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK------------ 733
+G GGFGTV+ L D VA+K + + + G + +
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGW----SPLSDSVTCPLEVALLWKVGAG 94
Query: 734 --HQNLVPLLGYCSFDEEKLLVYEYMVNGSLDL--WLRNRTGSL-EVLGWDKRY--KIAC 786
H ++ LL + E +LV E + DL ++ + G L E + + ++
Sbjct: 95 GGHPGVIRLLDWFETQEGFMLVLERPLPAQ-DLFDYITEK-GPLGEGPS--RCFFGQVVA 150
Query: 787 GAARGLAFLHHGFTPHIIHRDIKASNILLNEE-FEAKVADFGLARLISACETHVSTDIAG 845
+ H ++HRDIK NIL++ AK+ DFG L+ G
Sbjct: 151 A----IQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDF---DG 200
Query: 846 TFGYIPPEY--GQS--GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901
T Y PPE+ V+S G++L ++V G P F+ +
Sbjct: 201 TRVYSPPEWISRHQYHALPA---TVWSLGILLYDMVCGDIP----FERDQ---------- 243
Query: 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
++ + ++ P ++ D ++ + L P+ RP++ +L
Sbjct: 244 EILEA---ELHFPAHVSPDCCALIRRCLAP-------KPSSRPSLEEILL 283
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 98.4 bits (246), Expect = 2e-22
Identities = 66/222 (29%), Positives = 91/222 (40%), Gaps = 30/222 (13%)
Query: 677 ATNNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLS-QAKTQGHREF--TA--E---ME 727
AT+ + IG G +GTVYKA G VA+K + G + E +
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 728 TLGKVKHQNLVPLL----GYCSFDEEKL-LVYEYMVNGSLDL--WLRNRTGSLEVLGWDK 780
L +H N+V L+ + E K+ LV+E++ DL +L K
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPPGLPAETIK 123
Query: 781 RYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS 840
RGL FLH I+HRD+K NIL+ K+ADFGLAR+ S
Sbjct: 124 DLMRQF--LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL-- 176
Query: 841 TDIAGTFGYIPPE--YGQSGRSTTRGDVYSFGVILLELVTGK 880
T + T Y PE T D++S G I E+ K
Sbjct: 177 TPVVVTLWYRAPEVLLQS--TYATPVDMWSVGCIFAEMFRRK 216
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 97.9 bits (244), Expect = 2e-22
Identities = 32/272 (11%), Positives = 78/272 (28%), Gaps = 58/272 (21%)
Query: 687 IGDGGFGTVYKA---ALPDGKTVAVKKL---SQAKTQGHREFTAEMETLGKVKHQNLVPL 740
G ++A AL + VA+ + +E + L ++ + +
Sbjct: 39 HGGVPPLQFWQALDTAL--DRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARV 96
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT 800
L L+V E++ GSL + + + A H
Sbjct: 97 LDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPVGAI------RAMQSLAAAADAAHRA-- 148
Query: 801 PHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRS 860
+ S + ++ + + +A +P
Sbjct: 149 -GVALSIDHPSRVRVSIDGDVVLAY---------------------PATMPDA------- 179
Query: 861 TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTAD 920
+ D+ G L L+ + P + + + + A ++P + D
Sbjct: 180 NPQDDIRGIGASLYALLVNRWP----LPEAGVRSGLAPAERDT----AGQPIEPADIDRD 231
Query: 921 SKPMMLKMLRIAGDCLSDNPAMRP--TMLHVL 950
++ +A + + +R T+L+++
Sbjct: 232 IPF---QISAVAARSVQGDGGIRSASTLLNLM 260
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 98.0 bits (245), Expect = 2e-22
Identities = 66/291 (22%), Positives = 113/291 (38%), Gaps = 70/291 (24%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
++G G F V+ GK A+K + ++ E+ L K+KH+N+V L
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI- 74
Query: 745 SFDEEKL--LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLAFLH 796
++ LV + + G L + R Y K A + + +LH
Sbjct: 75 -YESTTHYYLVMQLVSGGELFDRILER----------GVYTEKDASLVIQQVLSAVKYLH 123
Query: 797 -HGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
+G I+HRD+K N+L E + + DFGL+++ + + + GT GY+ P
Sbjct: 124 ENG----IVHRDLKPENLLYLTPEENSKIMITDFGLSKME---QNGIMSTACGTPGYVAP 176
Query: 853 E------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906
E Y ++ D +S GVI L+ G P F + L F+K+K+G
Sbjct: 177 EVLAQKPYSKA------VDCWSIGVITYILLCGYPP----FYEETESKL----FEKIKEG 222
Query: 907 QAADVLD------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+ + + +K + +L +P R T L
Sbjct: 223 Y----YEFESPFWDDI-SESAKDFICHLLEK-------DPNERYTCEKALS 261
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 98.4 bits (246), Expect = 2e-22
Identities = 63/221 (28%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 679 NNFCKTNIIGDGGFGTVYKA--ALPDGKTVAVKKLSQAKTQGHRE---FTA--E---MET 728
+ IG+G +G V+KA G+ VA+K++ + Q E + E +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV---RVQTGEEGMPLSTIREVAVLRH 67
Query: 729 LGKVKHQNLVPLL----GYCSFDEEKL-LVYEYMVNGSLDL--WLRNRTGSLEVLGWDKR 781
L +H N+V L + E KL LV+E++ DL +L K
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV---DQDLTTYLDKVPEPGVPTETIKD 124
Query: 782 YKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVST 841
RGL FLH ++HRD+K NIL+ + K+ADFGLAR+ S T
Sbjct: 125 MMFQL--LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--T 177
Query: 842 DIAGTFGYIPPE--YGQSGRSTTRGDVYSFGVILLELVTGK 880
+ T Y PE T D++S G I E+ K
Sbjct: 178 SVVVTLWYRAPEVLLQS--SYATPVDLWSVGCIFAEMFRRK 216
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 2e-22
Identities = 61/245 (24%), Positives = 96/245 (39%), Gaps = 48/245 (19%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA--------EMETLGKVKHQN 736
+G G G V A K VA+K +S+ K A E+E L K+ H
Sbjct: 17 TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 737 LVPLLGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR--- 790
++ + + FD E +V E M G L + KR
Sbjct: 77 IIKIKNF--FDAEDYYIVLELMEGGELFDKVVGN----------KRLKEATCKLYFYQML 124
Query: 791 -GLAFLH-HGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAG 845
+ +LH +G IIHRD+K N+LL E+ K+ DFG ++++ ET + + G
Sbjct: 125 LAVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCG 178
Query: 846 TFGYIPPEYGQSGRSTTRG---DVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902
T Y+ PE S + D +S GVIL ++G P + + +
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-------LKDQ 231
Query: 903 MKKGQ 907
+ G+
Sbjct: 232 ITSGK 236
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 4e-22
Identities = 49/219 (22%), Positives = 74/219 (33%), Gaps = 40/219 (18%)
Query: 686 IIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGK-----------VKH 734
I G +G V +G VA+K++ + G L K H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 735 QNLVPLL-----GYCSFDEEKLLVYEYMVNGSLDLW--LRNRTGSLEVLGWDKR-----Y 782
N++ L + LV E M DL + ++ + + Y
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELM---RTDLAQVIHDQRIVIS----PQHIQYFMY 141
Query: 783 KIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD 842
I GL LH ++HRD+ NILL + + + DF LAR T
Sbjct: 142 HI----LLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTH 192
Query: 843 IAGTFGYIPPEY-GQSGRSTTRGDVYSFGVILLELVTGK 880
Y PE Q T D++S G ++ E+ K
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 5e-22
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 58/283 (20%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA------EMETLGKVKHQ--NL 737
+G GGFG+VY + D VA+K + + + E E+ L KV +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSLDL--WLRNRTGSL-EVLGWDKRYKIACGAARGLAF 794
+ LL + + +L+ E DL ++ R G+L E L +++ +
Sbjct: 111 IRLLDWFERPDSFVLILER-PEPVQDLFDFITER-GALQEELARSFFWQVLEA----VRH 164
Query: 795 LH-HGFTPHIIHRDIKASNILLNEE-FEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
H G ++HRDIK NIL++ E K+ DFG L+ GT Y PP
Sbjct: 165 CHNCG----VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPP 217
Query: 853 EYGQ----SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908
E+ + GRS V+S G++L ++V G P F+ E ++ +G
Sbjct: 218 EWIRYHRYHGRSA---AVWSLGILLYDMVCGDIP----FEHDE----------EIIRG-- 258
Query: 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
V ++++ + ++ L + P+ RPT +
Sbjct: 259 -QVFFRQRVSSECQHLIRWCLAL-------RPSDRPTFEEIQN 293
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 5e-22
Identities = 65/290 (22%), Positives = 110/290 (37%), Gaps = 61/290 (21%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGY 743
+G+G F K + AVK +S+ ++ E+ L + H N+V L
Sbjct: 18 PLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EITALKLCEGHPNIVKLHEV 74
Query: 744 CSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLAFLH- 796
LV E + G L E + K + A R ++ +H
Sbjct: 75 FHDQLHTFLVMELLNGGEL----------FERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 797 HGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE 853
G ++HRD+K N+L N+ E K+ DFG ARL + T Y PE
Sbjct: 125 VG----VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPCFTLHYAAPE 179
Query: 854 ------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907
Y +S D++S GVIL +++G+ P + + + V + +K+KKG
Sbjct: 180 LLNQNGYDES------CDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE-IMKKIKKGD 232
Query: 908 AADVLD------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
V + ++K ++ +L + +P R M +
Sbjct: 233 ----FSFEGEAWKNV-SQEAKDLIQGLLTV-------DPNKRLKMSGLRY 270
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 5e-22
Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 27/217 (12%)
Query: 676 EATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQA---KTQGHREFTAEMETLGK 731
+ IG G G V A + VA+KKLS+ +T R + E+ +
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKC 80
Query: 732 VKHQNLVPLL-------GYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYK- 783
V H+N++ LL F ++ +V E M + +L ++ L+ +R
Sbjct: 81 VNHKNIIGLLNVFTPQKSLEEF-QDVYIVMELM-DANLCQVIQME---LD----HERMSY 131
Query: 784 IACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDI 843
+ G+ LH IIHRD+K SNI++ + K+ DFGLAR +A + + T
Sbjct: 132 LLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPY 186
Query: 844 AGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK 880
T Y PE D++S G I+ E++ G
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 96.5 bits (241), Expect = 8e-22
Identities = 72/263 (27%), Positives = 116/263 (44%), Gaps = 37/263 (14%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFT---AEMETLGKVKH 734
+F I+G+G F TV A L + A+K L + + E + + ++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 735 QNLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYK-----IACG 787
V L Y +F D+EKL Y NG L ++R + GS + + + I
Sbjct: 90 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFD----ETCTRFYTAEIVSA 142
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD-IAGT 846
L +LH IIHRD+K NILLNE+ ++ DFG A+++S + GT
Sbjct: 143 ----LEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 195
Query: 847 FGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906
Y+ PE + D+++ G I+ +LV G P F+ GN +FQK+ K
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRA---GNEYL-IFQKIIKL 247
Query: 907 QAADVLDPTVLTADSKPMMLKML 929
+ P ++ ++ K+L
Sbjct: 248 ---EYDFPEKFFPKARDLVEKLL 267
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 8e-22
Identities = 77/302 (25%), Positives = 115/302 (38%), Gaps = 77/302 (25%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA--------------------- 724
IG G +G V A D A+K LS+ K F
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 725 -----EMETLGKVKHQNLVPLLGYCSFD---EEKL-LVYEYMVNGSLDLWLRNRTGSLEV 775
E+ L K+ H N+V L D E+ L +V+E + G + +EV
Sbjct: 81 EQVYQEIAILKKLDHPNVVKL--VEVLDDPNEDHLYMVFELVNQGPV----------MEV 128
Query: 776 LGWDKRYKIACGAAR--------GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFG 827
K AR G+ +LH+ IIHRDIK SN+L+ E+ K+ADFG
Sbjct: 129 PT-LKPLSED--QARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFG 182
Query: 828 LARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRG---DVYSFGVILLELVTGKEPTG 884
++ + +S GT ++ PE R G DV++ GV L V G+ P
Sbjct: 183 VSNEFKGSDALLSN-TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP-- 239
Query: 885 PEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP 944
F D ++ + K+K + D + D K ++ +ML NP R
Sbjct: 240 --FMD---ERIMC-LHSKIKSQA-LEFPDQPDIAEDLKDLITRMLDK-------NPESRI 285
Query: 945 TM 946
+
Sbjct: 286 VV 287
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 8e-22
Identities = 64/294 (21%), Positives = 112/294 (38%), Gaps = 71/294 (24%)
Query: 685 NIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGK-VKHQNLVPLLG 742
IG G + + AVK + ++K E +E L + +H N++ L
Sbjct: 28 EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE----IEILLRYGQHPNIITLKD 83
Query: 743 YCSFDEEK--LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLAF 794
+D+ K +V E M G L + + K + + A + +
Sbjct: 84 V--YDDGKYVYVVTELMKGGELLDKILRQ----------KFFSEREASAVLFTITKTVEY 131
Query: 795 LH-HGFTPHIIHRDIKASNILLNEEFEA----KVADFGLARLISACETHVSTDIAGTFGY 849
LH G ++HRD+K SNIL +E ++ DFG A+ + A E + T +
Sbjct: 132 LHAQG----VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA-ENGLLMTPCYTANF 186
Query: 850 IPPE------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKM 903
+ PE Y + D++S GV+L ++TG P D + ++
Sbjct: 187 VAPEVLERQGYDAA------CDIWSLGVLLYTMLTGYTPFANGPDDTPEE-----ILARI 235
Query: 904 KKGQAADVLD------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
G+ +V + +K ++ KML + +P R T VL+
Sbjct: 236 GSGK----FSLSGGYWNSV-SDTAKDLVSKMLHV-------DPHQRLTAALVLR 277
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 1e-21
Identities = 69/296 (23%), Positives = 112/296 (37%), Gaps = 70/296 (23%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVK-----KLSQAKTQGHREFTAEMETLGKVKHQNLVP 739
+IG G F V + G+ AVK K + + + E +KH ++V
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 740 LLGYCSFDEEKLLVYEYMVNGSL--DLWLRNRTGSLEVLGWDKRY--KIACGAAR----G 791
LL S D +V+E+M L ++ R G Y +A R
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGF--------VYSEAVASHYMRQILEA 142
Query: 792 LAFLH-HGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAGTF 847
L + H + IIHRD+K +LL K+ FG+A + V+ GT
Sbjct: 143 LRYCHDNN----IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG-ESGLVAGGRVGTP 197
Query: 848 GYIPPE------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901
++ PE YG+ DV+ GVIL L++G P F + +F+
Sbjct: 198 HFMAPEVVKREPYGKP------VDVWGCGVILFILLSGCLP----FYGTKER-----LFE 242
Query: 902 KMKKGQAADVLD------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+ KG+ + + +K ++ +ML + +PA R T+ L
Sbjct: 243 GIIKGK----YKMNPRQWSHI-SESAKDLVRRMLML-------DPAERITVYEALN 286
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 2e-21
Identities = 68/289 (23%), Positives = 113/289 (39%), Gaps = 62/289 (21%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA----EMETLGKVKHQNLVPLL 741
+G+G +G V + AVK L + K + A E++ L +++H+N++ L+
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72
Query: 742 GYCSFDEEK--LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAAR--------G 791
+E++ +V EY G E+L + A G
Sbjct: 73 DVLYNEEKQKMYMVMEY-CVC----------GMQEMLDSVPEKRFPVCQAHGYFCQLIDG 121
Query: 792 LAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA------CETHVSTDIA 844
L +LH G I+H+DIK N+LL K++ G+A + C T
Sbjct: 122 LEYLHSQG----IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT-----SQ 172
Query: 845 GTFGYIPPE--YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902
G+ + PPE G S + D++S GV L + TG P F EG N+ +F+
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP----F---EGDNIYK-LFEN 224
Query: 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+ KG P ++ ML PA R ++ + +
Sbjct: 225 IGKG---SYAIPGDCGPPLSDLLKGMLEY-------EPAKRFSIRQIRQ 263
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 2e-21
Identities = 75/291 (25%), Positives = 117/291 (40%), Gaps = 66/291 (22%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQG--HREFTAEMETLGKVKHQNLVPLLG 742
+G G F V + + G+ A ++ K H++ E +KH N+V L
Sbjct: 18 ELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 77
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLAFLH 796
S + L+++ + G L + R + Y A + + H
Sbjct: 78 SISEEGHHYLIFDLVTGGELFEDIVAR----------EYYSEADASHCIQQILEAVLHCH 127
Query: 797 -HGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
G ++HR++K N+LL + K+ADFGLA + E AGT GY+ P
Sbjct: 128 QMG----VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG-EQQAWFGFAGTPGYLSP 182
Query: 853 E------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906
E YG+ D+++ GVIL L+ G P F D + L +Q++K G
Sbjct: 183 EVLRKDPYGKP------VDLWACGVILYILLVGYPP----FWDEDQHRL----YQQIKAG 228
Query: 907 QAADVLD------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
D TV T ++K ++ KML I NP+ R T LK
Sbjct: 229 A----YDFPSPEWDTV-TPEAKDLINKMLTI-------NPSKRITAAEALK 267
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 2e-21
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 31/221 (14%)
Query: 676 EATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLS--QAKTQGHREFTAEMETLGKV 732
+ + + IG+G +G V A + VA+KK+S + +T R E++ L +
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRF 82
Query: 733 KHQNLVPLL-----GYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR-----Y 782
+H+N++ + ++ +V + M DL+ +T L + Y
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLS----NDHICYFLY 135
Query: 783 KIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS-- 840
+I RGL ++H +++HRD+K SN+LLN + K+ DFGLAR+ H
Sbjct: 136 QI----LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 188
Query: 841 TDIAGTFGYIPPEY-GQSGRSTTRGDVYSFGVILLELVTGK 880
T+ T Y PE S T D++S G IL E+++ +
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 2e-21
Identities = 67/289 (23%), Positives = 114/289 (39%), Gaps = 66/289 (22%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
+G G VY+ K A+K L KT + E+ L ++ H N++ L
Sbjct: 60 ELGRGATSIVYRCKQKGTQKPYALKVLK--KTVDKKIVRTEIGVLLRLSHPNIIKLKEIF 117
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLAFLH-H 797
E LV E + G L + + Y + A A + +A+LH +
Sbjct: 118 ETPTEISLVLELVTGGELFDRIVEK----------GYYSERDAADAVKQILEAVAYLHEN 167
Query: 798 GFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE- 853
G I+HRD+K N+L + K+ADFGL++++ + + GT GY PE
Sbjct: 168 G----IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE--HQVLMKTVCGTPGYCAPEI 221
Query: 854 -----YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908
YG D++S G+I L+ G EP E D +F+++ +
Sbjct: 222 LRGCAYGPE------VDMWSVGIITYILLCGFEPFYDERGDQF-------MFRRILNCE- 267
Query: 909 ADVLD------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
V + ++K ++ K++ + +P R T L+
Sbjct: 268 ---YYFISPWWDEV-SLNAKDLVRKLIVL-------DPKKRLTTFQALQ 305
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 97.9 bits (244), Expect = 3e-21
Identities = 69/279 (24%), Positives = 115/279 (41%), Gaps = 42/279 (15%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFT---AEMETLGKVKH 734
+ F ++G GGFG V+ + GK A KKL++ + + + + E + L KV
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 735 QNLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDK-RYKIACGAARG 791
+ +V L +F + L LV M G + + N + + A G
Sbjct: 245 RFIVSL--AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ-IVSG 301
Query: 792 LAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYI 850
L LH II+RD+K N+LL+++ +++D GLA + A +T AGT G++
Sbjct: 302 LEHLHQRN----IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTPGFM 356
Query: 851 PPE------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904
PE Y S D ++ GV L E++ + P F+ + Q++
Sbjct: 357 APELLLGEEYDFS------VDYFALGVTLYEMIAARGP----FRARGEKVENKELKQRVL 406
Query: 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMR 943
+ V P + SK + L L +P R
Sbjct: 407 EQ---AVTYPDKFSPASK-DFCEAL------LQKDPEKR 435
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 3e-21
Identities = 58/295 (19%), Positives = 106/295 (35%), Gaps = 37/295 (12%)
Query: 207 NLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSH 266
+ +L + + S+ + N+++ + + I L + L L+
Sbjct: 22 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNG 77
Query: 267 NNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNN 326
N L+ ++ L+ +++ G L N++ L + L L +
Sbjct: 78 NKLT--------------DIKPLANLKNLGWLFLDENKVK--DLSSLKDLKKLKSLSLEH 121
Query: 327 NMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLG 386
N +S I G L L L +L L N++T KL L L +NQ++ I L
Sbjct: 122 NGIS-DING-LVHLPQLESLYLGNNKITDITV--LSRLTKLDTLSLEDNQIS-DIV-PLA 175
Query: 387 SLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQH 446
L L L L+ N +S + LK L L+L E + + SN++ +
Sbjct: 176 GLTKLQNLYLSKNHIS--DLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTD 233
Query: 447 NKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTG 501
L P E+ S+ N+ + LP +S++ + K
Sbjct: 234 GSLVTP--EIISDDG--DYEKPNVKWH-----LPEFTNEVSFIFYQPVTIGKAKA 279
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 1e-19
Identities = 50/249 (20%), Positives = 94/249 (37%), Gaps = 42/249 (16%)
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIP 358
+L ++ + + ++ NN+ + + G + L N+T L L+ N+LT I
Sbjct: 30 NLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQG-IQYLPNVTKLFLNGNKLTD-I- 83
Query: 359 SEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHL 418
+ L L+L N++ + SL L L L+L N +S +L +L L
Sbjct: 84 KPLANLKNLGWLFLDENKVK-DLS-SLKDLKKLKSLSLEHNGIS--DINGLVHLPQLESL 139
Query: 419 DLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGG 478
L N++ + LS + L L L+ N++S ++
Sbjct: 140 YLGNNKITD--ITVLSRLTKLDTLSLEDNQIS------------------DIVP------ 173
Query: 479 LPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLL 538
L L+ L NL L +N + ++ L L L+ L++ + +L
Sbjct: 174 ----LAGLTKLQNLYLSKNHIS-DLRA-LAGLKNLDVLELFSQECLNKPINHQSNLVVPN 227
Query: 539 YLSLAENRL 547
+ + L
Sbjct: 228 TVKNTDGSL 236
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 3e-18
Identities = 53/249 (21%), Positives = 98/249 (39%), Gaps = 43/249 (17%)
Query: 321 DLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGS 380
+ + + +I +L + +T + + + + N+ + S
Sbjct: 6 ETITVPTPIK-QIFS-DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-S 60
Query: 381 IPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLV 440
+ + L + KL L GNKL+ NLK L L L N++ + SSL ++ L
Sbjct: 61 VQ-GIQYLPNVTKLFLNGNKLT--DIKPLANLKNLGWLFLDENKV--KDLSSLKDLKKLK 115
Query: 441 GLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFT 500
L L+HN +S +++ L +L L +L L NK T
Sbjct: 116 SLSLEHNGIS------------------DING----------LVHLPQLESLYLGNNKIT 147
Query: 501 GEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNL 560
+I L L +L+ L + N++ I + L+ L L L++N + + +G +NL
Sbjct: 148 -DITV-LSRLTKLDTLSLEDNQIS-DIVP-LAGLTKLQNLYLSKNHISDLRALAG-LKNL 202
Query: 561 SKISLTGNK 569
+ L +
Sbjct: 203 DVLELFSQE 211
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 4e-15
Identities = 53/287 (18%), Positives = 107/287 (37%), Gaps = 32/287 (11%)
Query: 139 LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLK 198
+ +L + T + + ++ + A N+ ++ S+ + + +L L N L
Sbjct: 26 TIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLT 81
Query: 199 GHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQ 258
+ K + NL L L L+ N + L D L +L L +N +S + + L Q
Sbjct: 82 -DI-KPLANLKNLGWLFLDENKVKDLSS--LKDLKKLKSLSLEHNGISDI--NGLVHLPQ 135
Query: 259 LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVV 318
L+ L L +N ++ + L + L N++S +P L
Sbjct: 136 LESLYLGNNKITDITVLS--------RLTKLDTL------SLEDNQISDIVP--LAGLTK 179
Query: 319 VVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLT 378
+ +L L+ N +S + L+ L NL L+L + + + + + + L
Sbjct: 180 LQNLYLSKNHIS-DLRA-LAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLV 237
Query: 379 GSIPWSLGSLGGLVKLNLTGN--KLSGKVPTSFGNLKELTHLDLSFN 423
P + G K N+ + + + +V F + F+
Sbjct: 238 T--PEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFH 282
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 3e-13
Identities = 48/264 (18%), Positives = 98/264 (37%), Gaps = 25/264 (9%)
Query: 44 MESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLT 103
+ S ++ I +I + +L ++ ++ + S +++I + + +
Sbjct: 3 LGSETITVPTPIKQIFS-DDAFAETIKDNLKKKSVTDAVTQNELNS--IDQIIANNSDIK 59
Query: 104 GTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSET 162
+++G + N+++L + N + I + L+ L L L LD N + + + +
Sbjct: 60 -SVQG-IQYLPNVTKLFLNGNKL-TDI-KPLANLKNLGWLFLDENKVKDLSSLK--DLKK 113
Query: 163 LMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFD 222
L S +N + + + + LE L L NN + + L+ L L L N
Sbjct: 114 LKSLSLEHNGIS-DIN-GLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQIS 169
Query: 223 GIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSK------ 276
I+P L L L L N++S L +A L L L L +
Sbjct: 170 DIVP--LAGLTKLQNLYLSKNHISDLRA--LAGLKNLDVLELFSQECLNKPINHQSNLVV 225
Query: 277 -PSSYFRQANMPDLSFIQHHGVFD 299
+ ++ I G ++
Sbjct: 226 PNTVKNTDGSLVTPEIISDDGDYE 249
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 4e-05
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 10/163 (6%)
Query: 13 EELSDLPILT-FAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSI 71
L DL L + E N +S + L + Q+ESL L +N+ I I + + L ++
Sbjct: 106 SSLKDLKKLKSLSLEHNGIS-DING-LVHLPQLESLYLGNNK-ITDITV-LSRLTKLDTL 161
Query: 72 SLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIP 131
SL +N +S I L L+ + L N ++ + NL L +F
Sbjct: 162 SLEDNQIS-DIV-PLAGLTKLQNLYLSKNHIS-DLRA-LAGLKNLDVLELFSQECLNKPI 217
Query: 132 EYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLE 174
+ S L ++ + + + + + P I + + + +L E
Sbjct: 218 NHQSNL-VVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPE 259
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 95.1 bits (237), Expect = 4e-21
Identities = 72/291 (24%), Positives = 116/291 (39%), Gaps = 67/291 (23%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQG--HREFTAEMETLGKVKHQNLVPLLG 742
+G G F V + G A K ++ K ++ E K++H N+V L
Sbjct: 36 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 95
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLAFLH 796
+ LV++ + G L + R + Y A + +A+ H
Sbjct: 96 SIQEESFHYLVFDLVTGGELFEDIVAR----------EFYSEADASHCIQQILESIAYCH 145
Query: 797 -HGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
+G I+HR++K N+LL + K+ADFGLA ++ ++ AGT GY+ P
Sbjct: 146 SNG----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN--DSEAWHGFAGTPGYLSP 199
Query: 853 E------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906
E Y + D+++ GVIL L+ G P F D + L + ++K G
Sbjct: 200 EVLKKDPYSKP------VDIWACGVILYILLVGYPP----FWDEDQHRL----YAQIKAG 245
Query: 907 QAADVLD------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
D TV T ++K ++ ML + NP R T LK
Sbjct: 246 A----YDYPSPEWDTV-TPEAKSLIDSMLTV-------NPKKRITADQALK 284
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 95.2 bits (237), Expect = 6e-21
Identities = 55/217 (25%), Positives = 84/217 (38%), Gaps = 33/217 (15%)
Query: 680 NFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLV 738
KT I+G G FG V+K G +A K + + E E+ + ++ H NL+
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149
Query: 739 PLLGYCSFDEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRY--KIACGAAR----G 791
L + +LV EY+ G L D ++ + G
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFD----------RIIDESYNLTELDTILFMKQICEG 199
Query: 792 LAFLH-HGFTPHIIHRDIKASNILL--NEEFEAKVADFGLARLISACETHVSTDIAGTFG 848
+ +H I+H D+K NIL + + K+ DFGLAR GT
Sbjct: 200 IRHMHQMY----ILHLDLKPENILCVNRDAKQIKIIDFGLARRYK--PREKLKVNFGTPE 253
Query: 849 YIPPE---YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
++ PE Y T D++S GVI L++G P
Sbjct: 254 FLAPEVVNYDFVSFPT---DMWSVGVIAYMLLSGLSP 287
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 95.2 bits (237), Expect = 6e-21
Identities = 47/210 (22%), Positives = 79/210 (37%), Gaps = 33/210 (15%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS 745
+G G FG V++ G+ K ++ E+ + ++ H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 746 FDEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLAFLH-H 797
E +L+ E++ G L D + D + R GL +H H
Sbjct: 119 DKYEMVLILEFLSGGELFD----------RIAAEDYKMSEAEVINYMRQACEGLKHMHEH 168
Query: 798 GFTPHIIHRDIKASNILL--NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE-- 853
I+H DIK NI+ + K+ DFGLA ++ + T + PE
Sbjct: 169 S----IVHLDIKPENIMCETKKASSVKIIDFGLATKLN--PDEIVKVTTATAEFAAPEIV 222
Query: 854 -YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
G T D+++ GV+ L++G P
Sbjct: 223 DREPVGFYT---DMWAIGVLGYVLLSGLSP 249
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 94.8 bits (236), Expect = 6e-21
Identities = 62/295 (21%), Positives = 108/295 (36%), Gaps = 45/295 (15%)
Query: 616 KQIKRRSRCSDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSINIAMFEQPLMRLTLVHIL 675
+ + +R I + + NL + + ++ Q + +
Sbjct: 27 RHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDW 86
Query: 676 EATNNFCKT----NIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA------ 724
A F + ++IG G V + G AVK + + E
Sbjct: 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREAT 146
Query: 725 --EMETLGKVK-HQNLVPLLGYCSFDEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDK 780
E L +V H +++ L+ LV++ M G L D +L +
Sbjct: 147 RRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFD-YLTEK----------V 195
Query: 781 RY--KIACGAAR----GLAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833
K R ++FLH + I+HRD+K NILL++ + +++DFG + +
Sbjct: 196 ALSEKETRSIMRSLLEAVSFLHANN----IVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251
Query: 834 ACETHVSTDIAGTFGYIPPE-YGQSGRSTTRG-----DVYSFGVILLELVTGKEP 882
++ GT GY+ PE S T G D+++ GVIL L+ G P
Sbjct: 252 --PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 96.8 bits (241), Expect = 8e-21
Identities = 50/207 (24%), Positives = 80/207 (38%), Gaps = 27/207 (13%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS 745
+G G FG V++ G A K + E++T+ ++H LV L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 746 FDEEKLLVYEYMVNGSLDLWLRNRTGSL-EVLGWDKRYKIACGAAR----GLAFLHHGFT 800
D E +++YE+M G L + + + E A R GL +H
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSE--------DEAVEYMRQVCKGLCHMH---E 273
Query: 801 PHIIHRDIKASNILLNEEFEA--KVADFGLARLISACETHVSTDIAGTFGYIPPE---YG 855
+ +H D+K NI+ + K+ DFGL + GT + PE
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD--PKQSVKVTTGTAEFAAPEVAEGK 331
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEP 882
G T D++S GV+ L++G P
Sbjct: 332 PVGYYT---DMWSVGVLSYILLSGLSP 355
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 92.6 bits (231), Expect = 9e-21
Identities = 71/293 (24%), Positives = 116/293 (39%), Gaps = 71/293 (24%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQG--HREFTAEMETLGKVKHQNLVPLLG 742
+G G F V + G A K ++ K ++ E K++H N+V L
Sbjct: 13 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLAFLH 796
+ LV++ + G L + R + Y A + +A+ H
Sbjct: 73 SIQEESFHYLVFDLVTGGELFEDIVAR----------EFYSEADASHCIQQILESIAYCH 122
Query: 797 -HGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
+G I+HR++K N+LL + K+ADFGLA ++ ++ AGT GY+ P
Sbjct: 123 SNG----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN--DSEAWHGFAGTPGYLSP 176
Query: 853 E------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEF--KDIEGGNLVGWVFQKMK 904
E Y + D+++ GVIL L+ G P F +D ++ ++K
Sbjct: 177 EVLKKDPYSKP------VDIWACGVILYILLVGYPP----FWDEDQHR------LYAQIK 220
Query: 905 KGQAADVLD------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
G D TV T ++K ++ ML + NP R T LK
Sbjct: 221 AGA----YDYPSPEWDTV-TPEAKSLIDSMLTV-------NPKKRITADQALK 261
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 2e-20
Identities = 71/281 (25%), Positives = 116/281 (41%), Gaps = 43/281 (15%)
Query: 687 IGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFT---AEMETLGKVKHQNLVPLLG 742
IG G FG V D K A+K +++ K E E++ + ++H LV L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL-- 80
Query: 743 YCSF-DEEKL-LVYEYMVNGSLDLWL-RNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF 799
+ SF DEE + +V + ++ G L L +N E + K + C L +L
Sbjct: 81 WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETV---KLF--ICELVMALDYLQ--- 132
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE--YGQS 857
IIHRD+K NILL+E + DF +A ++ + +AGT Y+ PE +
Sbjct: 133 NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT--MAGTKPYMAPEMFSSRK 190
Query: 858 GRSTTRG-DVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916
G + D +S GV EL+ G+ P + + + + + V P+
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRP----YHIRSSTS----SKEIVHTFETTVVTYPSA 242
Query: 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957
+ + +LK L L NP R L +++
Sbjct: 243 WSQEMV-SLLKKL------LEPNPDQR------FSQLSDVQ 270
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 3e-20
Identities = 29/184 (15%), Positives = 73/184 (39%), Gaps = 12/184 (6%)
Query: 319 VVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLT 378
++ LL + + + +++ +LT + L+ +T + + ++ L + N T
Sbjct: 25 YLNGLLGQSSTA---NITEAQMNSLTYITLANINVTDL--TGIEYAHNIKDLTINNIHAT 79
Query: 379 GSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILN 438
P + L L +L + G ++ + L LT LD+S + D + + ++ +
Sbjct: 80 NYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPK 137
Query: 439 LVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENK 498
+ + L +N + L + ++ ++N+ + R + + L L
Sbjct: 138 VNSIDLSYNGAITDIMPLKTLP---ELKSLNIQFDGVHD--YRGIEDFPKLNQLYAFSQT 192
Query: 499 FTGE 502
G+
Sbjct: 193 IGGK 196
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 4e-17
Identities = 26/208 (12%), Positives = 59/208 (28%), Gaps = 36/208 (17%)
Query: 340 LTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGN 399
L ++ ++ L + L N +T + + + L +
Sbjct: 22 FKAYLNGLLGQSSTANITEAQM---NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNI 76
Query: 400 KLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSN 459
+ L L L + ++ +LS + +L L + H+ +
Sbjct: 77 HATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSI------ 128
Query: 460 SAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVS 519
+ L + ++DL N +I P L L +L+ L++
Sbjct: 129 --------------------LTKINTLPKVNSIDLSYNGAITDIMP-LKTLPELKSLNIQ 167
Query: 520 RNRLCGQIPETMCSLSNLLYLSLAENRL 547
+ + + L L +
Sbjct: 168 FDGVHDYRG--IEDFPKLNQLYAFSQTI 193
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 2e-12
Identities = 28/182 (15%), Positives = 61/182 (33%), Gaps = 11/182 (6%)
Query: 68 LKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIY 127
+ L + + ++ SL I L +T + G E N+ L I H
Sbjct: 25 YLNGLLGQSSTANITEAQM---NSLTYITLANINVT-DLTG-IEYAHNIKDLTINNIHA- 78
Query: 128 GSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAA 186
+ +S L L L + + T ++ +L +++ + S+ ++
Sbjct: 79 -TNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPK 137
Query: 187 LERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLS 246
+ + L+ N + + L L L++ + + D L L + +
Sbjct: 138 VNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQLYAFSQTIG 194
Query: 247 GL 248
G
Sbjct: 195 GK 196
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 5e-12
Identities = 26/182 (14%), Positives = 58/182 (31%), Gaps = 39/182 (21%)
Query: 391 LVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNI---LNLVGLYLQHN 447
+ L + + + + LT++ L+ + + L+ I N+ L + +
Sbjct: 25 YLNGLLGQSSTA---NITEAQMNSLTYITLANINV-----TDLTGIEYAHNIKDLTINNI 76
Query: 448 KLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDL 507
+ N + + LS L L + T + P+L
Sbjct: 77 HAT------------------NYNP----------ISGLSNLERLRIMGKDVTSDKIPNL 108
Query: 508 GNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTG 567
L L LD+S + I + +L + + L+ N + L +++
Sbjct: 109 SGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQF 168
Query: 568 NK 569
+
Sbjct: 169 DG 170
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 8e-11
Identities = 26/169 (15%), Positives = 47/169 (27%), Gaps = 41/169 (24%)
Query: 187 LERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLS 246
++ L + N I LS L L + L SLT LD+ ++
Sbjct: 68 IKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHD 125
Query: 247 GLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLS 306
I KI L ++ + LS+N I +P+L + ++ ++ +
Sbjct: 126 DSILTKINTLPKVNSIDLSYNGAITDIMP-------LKTLPELKSL------NIQFDGVH 172
Query: 307 GPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTG 355
+ L L + G
Sbjct: 173 DYRG--------------------------IEDFPKLNQLYAFSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 6e-09
Identities = 21/116 (18%), Positives = 39/116 (33%), Gaps = 4/116 (3%)
Query: 38 LGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDL 97
+ + +E L + P + + L + +S++ SI ++ T + IDL
Sbjct: 84 ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143
Query: 98 DGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGI 152
N I + L L I + ++ + P L L S G
Sbjct: 144 SYNGAITDIMP-LKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQLYAFSQTIGGK 196
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 3e-20
Identities = 54/221 (24%), Positives = 82/221 (37%), Gaps = 40/221 (18%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA---------EMETLGKVK-H 734
I+G G V + P K AVK + E++ L KV H
Sbjct: 24 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 83
Query: 735 QNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR-- 790
N++ L + LV++ M G L +L + K R
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK----------VTLSEKETRKIMRAL 133
Query: 791 --GLAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF 847
+ LH I+HRD+K NILL+++ K+ DFG + + ++ GT
Sbjct: 134 LEVICALHKLN----IVHRDLKPENILLDDDMNIKLTDFGFSCQLD--PGEKLREVCGTP 187
Query: 848 GYIPPE-YGQSGRSTTRG-----DVYSFGVILLELVTGKEP 882
Y+ PE S G D++S GVI+ L+ G P
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 93.7 bits (233), Expect = 3e-20
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 19/208 (9%)
Query: 686 IIGDGGFGTVYKAALPD-GKTVAVKKLSQAK--TQGHREFT-AEMETLGKVKHQNLVPLL 741
+IG G FG V L + K A+K L++ + + E + L + + L
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL- 139
Query: 742 GYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF 799
+ +F D+ L LV +Y V G L L L + Y + +H
Sbjct: 140 -HYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLP-EEMARFY--LAEMVIAIDSVH--- 192
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGR 859
H +HRDIK NIL++ ++ADFG + T S+ GT YI PE Q+
Sbjct: 193 QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAME 252
Query: 860 STTRG-----DVYSFGVILLELVTGKEP 882
D +S GV + E++ G+ P
Sbjct: 253 GGKGRYGPECDWWSLGVCMYEMLYGETP 280
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 5e-20
Identities = 66/285 (23%), Positives = 108/285 (37%), Gaps = 62/285 (21%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK----------HQ 735
+G G FG V+ A K V VK + K + + E LGKV H
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIK--KEKVLEDCWIEDPKLGKVTLEIAILSRVEHA 89
Query: 736 NLVPLLGYCSFDEEKLLVYEYMVNGSLDLW--LRNRTGSLEVLGWDKRYKIACGAARGLA 793
N++ +L LV E +G LDL+ + E L ++ +
Sbjct: 90 NIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFRQLVS----AVG 144
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET-HVSTDIAGTFGYIPP 852
+L IIHRDIK NI++ E+F K+ DFG A + + + GT Y P
Sbjct: 145 YLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTF---CGTIEYCAP 198
Query: 853 E------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906
E Y G +++S GV L LV + P F ++++
Sbjct: 199 EVLMGNPY--RGPEL---EMWSLGVTLYTLVFEENP-----------------FCELEET 236
Query: 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
A + P +++ + ++ +L+ P R T+ ++
Sbjct: 237 VEAAIHPPYLVSKELMSLVSGLLQP-------VPERRTTLEKLVT 274
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 6e-20
Identities = 61/215 (28%), Positives = 83/215 (38%), Gaps = 38/215 (17%)
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293
LDL +N LS L + L +L+ L L+ N L +P+
Sbjct: 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPA------------------ 78
Query: 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQL 353
G+F L L + L + +N L G +L NL L L RNQL
Sbjct: 79 --GIFK----ELK-----NLET------LWVTDNKLQALPIGVFDQLVNLAELRLDRNQL 121
Query: 354 TGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSL-GSLGGLVKLNLTGNKLSGKVPTSFGNL 412
P F KL L LG N+L S+P + L L +L L N+L +F L
Sbjct: 122 KSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKL 180
Query: 413 KELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHN 447
EL L L N+L + ++ L L LQ N
Sbjct: 181 TELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 85.0 bits (211), Expect = 2e-18
Identities = 69/249 (27%), Positives = 100/249 (40%), Gaps = 40/249 (16%)
Query: 326 NNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSL 385
N L K G S N ++D S +LT IPS + L L +N+L+ +
Sbjct: 1 NEALCKKDGGVCSCNNNKNSVDCSSKKLTA-IPS--NIPADTKKLDLQSNKLSSLPSKAF 57
Query: 386 GSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVGLYL 444
L L L L NKL F LK L L ++ N+L LP + + L NL L L
Sbjct: 58 HRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRL 116
Query: 445 QHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIP 504
N+L ++ +FD L+ LT L L N+ +P
Sbjct: 117 DRNQLK------------------SLPPRVFDS--------LTKLTYLSLGYNELQ-SLP 149
Query: 505 PDL-GNLMQLEYLDVSRNRLCGQIPETMC-SLSNLLYLSLAENRLEGMVPRSGICQNLSK 562
+ L L+ L + N+L ++PE L+ L L L N+L+ VP G +L K
Sbjct: 150 KGVFDKLTSLKELRLYNNQL-KRVPEGAFDKLTELKTLKLDNNQLK-RVPE-GAFDSLEK 206
Query: 563 ---ISLTGN 568
+ L N
Sbjct: 207 LKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 2e-15
Identities = 60/250 (24%), Positives = 82/250 (32%), Gaps = 76/250 (30%)
Query: 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSN--------LFDGIIPYELGDCISLT 236
A ++L L +N L K L+ L +L LN N +F + +L
Sbjct: 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELK--------NLE 88
Query: 237 TLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHG 296
TL + +N L L L L L L N L +P
Sbjct: 89 TLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKS-LPP--------------------R 127
Query: 297 VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGP 356
VFD L+ +L L L N L G +LT+L L L NQL
Sbjct: 128 VFD----SLT-----KL------TYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172
Query: 357 IPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELT 416
F +L+ L L NNQL +P +F +L++L
Sbjct: 173 PEGAFDKLTELKTLKLDNNQLK-RVP-----------------------EGAFDSLEKLK 208
Query: 417 HLDLSFNELD 426
L L N D
Sbjct: 209 MLQLQENPWD 218
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 3e-08
Identities = 45/182 (24%), Positives = 68/182 (37%), Gaps = 33/182 (18%)
Query: 91 SLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIP----EYLSKLPLMVLDLDS 146
L + L+ N L G+F++ NL L + N + ++P + L L L LD
Sbjct: 62 KLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKL-QALPIGVFDQLVN--LAELRLDR 118
Query: 147 NNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEI- 205
N +P +++S T L L L N L+ LPK +
Sbjct: 119 NQLKS-LPPRVFDSLT-----------------------KLTYLSLGYNELQ-SLPKGVF 153
Query: 206 GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLS 265
L++L L L +N + L TL L NN L + L +L+ L L
Sbjct: 154 DKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQ 213
Query: 266 HN 267
N
Sbjct: 214 EN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 3e-04
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 2 LSFNALSGSLPEELSD-LPILTFAA-EKNQLSGSLPS----WLGNWNQMESLLLSSNQFI 55
L+ N L +LP + L L N+L +LP L N + L L NQ +
Sbjct: 68 LNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVN---LAELRLDRNQ-L 121
Query: 56 GKIPPEI-GNCSMLKSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNLLTGTIEGVFEKC 113
+PP + + + L +SL N L S+P+ + SL+E+ L N L EG F+K
Sbjct: 122 KSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKL 180
Query: 114 SNLSQLVIFRNHIYGSIPE----YLSKLPLMVLDLDSNNF----TGIIPVSIW 158
+ L L + N + +PE L KL + L L N + GII ++ W
Sbjct: 181 TELKTLKLDNNQLK-RVPEGAFDSLEKLKM--LQLQENPWDCTCNGIIYMAKW 230
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 1e-19
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 51/279 (18%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKL--SQAKTQGHREFTAEMETLGKVKHQNLVPLLGY 743
IG G F V A + G+ VA+K + +Q ++ E+ + + H N+V L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 744 CSFDEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAAR----GLAFLHHG 798
++ L+ EY G + D + + G ++ K A R + + H
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAH--GRMKE-------KEARSKFRQIVSAVQYCHQK 133
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE----- 853
I+HRD+KA N+LL+ + K+ADFG + + + G Y PE
Sbjct: 134 ---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDA-FCGAPPYAAPELFQGK 188
Query: 854 -YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912
Y G DV+S GVIL LV+G P F L +++ +G
Sbjct: 189 KY--DGPEV---DVWSLGVILYTLVSGSLP----FDGQNLKEL----RERVLRG---KYR 232
Query: 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
P ++ D + ++ + L + NP R T+ ++K
Sbjct: 233 IPFYMSTDCENLLKRFLVL-------NPIKRGTLEQIMK 264
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 1e-19
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 26/216 (12%)
Query: 676 EATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQA---KTQGHREFTAEMETLGK 731
E + +G G +G+V A G+ VA+KKLS+ + R + E+ L
Sbjct: 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKH 79
Query: 732 VKHQNLVPLL------GYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIA 785
++H+N++ LL + LV +M DL + L+ +Y +
Sbjct: 80 MQHENVIGLLDVFTPASSLRNFYDFYLVMPFM---QTDL---QKIMGLKFSEEKIQY-LV 132
Query: 786 CGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG 845
+GL ++H ++HRD+K N+ +NE+ E K+ DFGLAR A T
Sbjct: 133 YQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADA----EMTGYVV 185
Query: 846 TFGYIPPE-YGQSGRSTTRGDVYSFGVILLELVTGK 880
T Y PE D++S G I+ E++TGK
Sbjct: 186 TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 1e-19
Identities = 56/210 (26%), Positives = 84/210 (40%), Gaps = 21/210 (10%)
Query: 686 IIGDGGFGTVYKAALPD-GKTVAVKKLSQAK--TQGHREFT-AEMETLGKVKHQNLVPLL 741
+IG G F V + G+ A+K +++ +G E + L + + L
Sbjct: 68 VIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQL- 126
Query: 742 GYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF 799
+ +F DE L LV EY V G L L L ++ G + Y + +H
Sbjct: 127 -HFAFQDENYLYLVMEYYVGGDL-LTLLSKFGERIPAEMARFY--LAEIVMAIDSVH--- 179
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGR 859
+HRDIK NILL+ ++ADFG + A T S GT Y+ PE Q+
Sbjct: 180 RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVG 239
Query: 860 STTRGDVY-------SFGVILLELVTGKEP 882
Y + GV E+ G+ P
Sbjct: 240 GGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 90.9 bits (226), Expect = 1e-19
Identities = 54/255 (21%), Positives = 90/255 (35%), Gaps = 73/255 (28%)
Query: 678 TNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN 736
+ + +G G FG V + + GK A+KK+ Q +RE ++ + + H N
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRE----LDIMKVLDHVN 61
Query: 737 LVPLLG--YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR------------- 781
++ L+ Y + DEE + L + + +
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP 121
Query: 782 ---YKIACGAA-------------------RGLAFLHHGFTPHIIHRDIKASNILLNEE- 818
+K+ R + F+H + I HRDIK N+L+N +
Sbjct: 122 DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH---SLGICHRDIKPQNLLVNSKD 178
Query: 819 FEAKVADFGLARLISACETHVSTDIAGTFGYI------PPE-------YGQSGRSTTRGD 865
K+ DFG A+ + E V+ YI PE Y T D
Sbjct: 179 NTLKLCDFGSAKKLIPSEPSVA--------YICSRFYRAPELMLGATEY------TPSID 224
Query: 866 VYSFGVILLELVTGK 880
++S G + EL+ GK
Sbjct: 225 LWSIGCVFGELILGK 239
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 1e-19
Identities = 43/210 (20%), Positives = 78/210 (37%), Gaps = 34/210 (16%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS 745
+G G FG V++ KT K + K E+ L +H+N++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVK-VKGTDQVLVKKEISILNIARHRNILHLHESFE 71
Query: 746 FDEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLAFLH-H 797
EE ++++E++ + + + + L FLH H
Sbjct: 72 SMEELVMIFEFISGLDIFE----------RINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 798 GFTPHIIHRDIKASNILLNEEFEA--KVADFGLARLISACETHVSTDIAGTFGYIPPE-- 853
I H DI+ NI+ + K+ +FG AR + + + Y PE
Sbjct: 122 N----IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF--RLLFTAPEYYAPEVH 175
Query: 854 -YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
+ +T D++S G ++ L++G P
Sbjct: 176 QHDVVSTAT---DMWSLGTLVYVLLSGINP 202
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 93.0 bits (231), Expect = 1e-19
Identities = 75/276 (27%), Positives = 112/276 (40%), Gaps = 39/276 (14%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQA---KTQGHREFTAEMETLGKVKH 734
N+F IIG GGFG VY D GK A+K L + QG E L V
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 735 QN---LVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA 789
+ +V + +F +KL + + M G L L E D R+ A
Sbjct: 249 GDCPFIVCM--SYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA---DMRFYAAE-II 302
Query: 790 RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGY 849
GL +H +++RD+K +NILL+E +++D GLA S + H S GT GY
Sbjct: 303 LGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGY 356
Query: 850 IPPEYGQSGRSTTRG-DVYSFGVILLELVTGKEP-TGPEFKDIEGGNLVGWVFQKMKKGQ 907
+ PE Q G + D +S G +L +L+ G P + KD + +
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE------IDRMTLTM- 409
Query: 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMR 943
V P + + + +L+ L L + R
Sbjct: 410 --AVELPDSFSPELR-SLLEGL------LQRDVNRR 436
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 2e-19
Identities = 62/296 (20%), Positives = 109/296 (36%), Gaps = 74/296 (25%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLG- 742
++G G G V + G+ A+K L + R+ E++ + ++V +L
Sbjct: 36 VLGLGVNGKVLECFHRRTGQKCALKLLY--DSPKARQ---EVDHHWQASGGPHIVCILDV 90
Query: 743 YCSFDEEKLLVY---EYMVNGSLDLWLRNRTGSLE--VLGWDKRY--KIACGAAR----G 791
Y + K + E M G L D+ + + A R
Sbjct: 91 YENMHHGKRCLLIIMECMEGGEL----------FSRIQERGDQAFTEREAAEIMRDIGTA 140
Query: 792 LAFLH-HGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAGTF 847
+ FLH H I HRD+K N+L ++ K+ DFG A+ + T
Sbjct: 141 IQFLHSHN----IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET---TQNALQTPCYTP 193
Query: 848 GYIPPE------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901
Y+ PE Y +S D++S GVI+ L+ G P F G + + +
Sbjct: 194 YYVAPEVLGPEKYDKS------CDMWSLGVIMYILLCGFPP----FYSNTGQAISPGMKR 243
Query: 902 KMKKGQAADVLD------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+++ GQ V + D+K ++ +L+ +P R T+ +
Sbjct: 244 RIRLGQ----YGFPNPEWSEV-SEDAKQLIRLLLKT-------DPTERLTITQFMN 287
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 3e-19
Identities = 64/210 (30%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLL- 741
+G G +G V A G VA+KKL + + R + E+ L ++H+N++ LL
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR-ELRLLKHMRHENVIGLLD 91
Query: 742 ------GYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR----YKIACGAARG 791
F + LV +M DL + E LG D+ Y++ +G
Sbjct: 92 VFTPDETLDDF-TDFYLVMPFM---GTDL---GKLMKHEKLGEDRIQFLVYQM----LKG 140
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
L ++H IIHRD+K N+ +NE+ E K+ DFGLAR T T Y
Sbjct: 141 LRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD----SEMTGYVVTRWYRA 193
Query: 852 PEY-GQSGRSTTRGDVYSFGVILLELVTGK 880
PE R T D++S G I+ E++TGK
Sbjct: 194 PEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 4e-19
Identities = 68/304 (22%), Positives = 117/304 (38%), Gaps = 66/304 (21%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGY 743
++G+G V L + AVK + + E+E L + + H+N++ L+ +
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 744 CSFDEEK--LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLAFL 795
F+EE LV+E M GS+ L + + + A + L FL
Sbjct: 80 --FEEEDRFYLVFEKMRGGSI----------LSHIHKRRHFNELEASVVVQDVASALDFL 127
Query: 796 H-HGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLI------SACETHVSTDIAG 845
H G I HRD+K NIL N+ K+ DF L I S T G
Sbjct: 128 HNKG----IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCG 183
Query: 846 TFGYIPPEYGQSGRSTTRG-----DVYSFGVILLELVTGKEP----TGPEFKDIEGGNLV 896
+ Y+ PE ++ D++S GVIL L++G P G + G
Sbjct: 184 SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP 243
Query: 897 GW---VFQKMKKGQAADVLD------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTML 947
+F+ +++G+ + + + +K ++ K+L + R +
Sbjct: 244 ACQNMLFESIQEGK----YEFPDKDWAHI-SCAAKDLISKLLVR-------DAKQRLSAA 291
Query: 948 HVLK 951
VL+
Sbjct: 292 QVLQ 295
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 91.0 bits (226), Expect = 5e-19
Identities = 69/279 (24%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQA--KTQGHREFT-AEMETLGKVKH 734
N F + ++G GGFG V + GK A KKL + K + E + L KV
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 735 QNLVPLLGYCSFD-EEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR 790
+ +V L +++ ++ L LV M G L + + + Y +I CG
Sbjct: 244 RFVVSL--AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG--- 298
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYI 850
L LH I++RD+K NILL++ +++D GLA + +T GT GY+
Sbjct: 299 -LEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYM 352
Query: 851 PPE------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904
PE Y S D ++ G +L E++ G+ P F+ + V + +K
Sbjct: 353 APEVVKNERYTFS------PDWWALGCLLYEMIAGQSP----FQQRKKKIKREEVERLVK 402
Query: 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMR 943
+ + ++ + L L +PA R
Sbjct: 403 EV---PEEYSERFSPQAR-SLCSQL------LCKDPAER 431
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 6e-19
Identities = 56/216 (25%), Positives = 88/216 (40%), Gaps = 36/216 (16%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVK-----KLSQAKTQGHRE-FTAEMETLGKVKHQNLV 738
+G G F V K G A K + ++ RE E+ L +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 739 PLLGYCSFDEEKLLVYEYMVNGSLDLWLR-NRTGSLEVLGWDKRYKIACGAAR----GLA 793
L + +L+ E + G +L+ + SL + A + G+
Sbjct: 79 TLHDVYENRTDVVLILELVSGG--ELFDFLAQKESL-------SEEEATSFIKQILDGVN 129
Query: 794 FLHHGFTPHIIHRDIKASNILL-NEEFEA---KVADFGLARLISACETHVSTDIAGTFGY 849
+LH T I H D+K NI+L ++ K+ DFGLA I + +I GT +
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEFKNIFGTPEF 184
Query: 850 IPPE---YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
+ PE Y G D++S GVI L++G P
Sbjct: 185 VAPEIVNYEPLGLEA---DMWSIGVITYILLSGASP 217
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 86.8 bits (216), Expect = 7e-19
Identities = 55/220 (25%), Positives = 85/220 (38%), Gaps = 46/220 (20%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVK-----KLSQAKTQGHRE-FTAEMETLGKVKHQNLVP 739
+G G F V K GK A K +LS ++ RE E+ L +++H N++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLA 793
L + +L+ E + G L + L + A + G+
Sbjct: 73 LHDIFENKTDVVLILELVSGGEL----------FDFLAEKESLTEDEATQFLKQILDGVH 122
Query: 794 FLH-HGFTPHIIHRDIKASNILL----NEEFEAKVADFGLARLISACETHVSTDIAGTFG 848
+LH I H D+K NI+L K+ DFG+A I A +I GT
Sbjct: 123 YLHSKR----IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPE 176
Query: 849 YIPPE------YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
++ PE G D++S GVI L++G P
Sbjct: 177 FVAPEIVNYEPLGLE------ADMWSIGVITYILLSGASP 210
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 7e-19
Identities = 62/217 (28%), Positives = 93/217 (42%), Gaps = 36/217 (16%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLS--QAKTQGHREFTAEMETLGKVKHQNLVPLL- 741
++G+G +G V A P G+ VA+KK+ R E++ L KH+N++ +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENIITIFN 76
Query: 742 ----GYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR----YKIACGAARGLA 793
E ++ E M DL +R S ++L D Y+ R +
Sbjct: 77 IQRPDSFENFNEVYIIQELM---QTDL---HRVISTQMLSDDHIQYFIYQT----LRAVK 126
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFG----- 848
LH ++IHRD+K SN+L+N + KV DFGLAR+I S G
Sbjct: 127 VLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFV 183
Query: 849 ----YIPPEY-GQSGRSTTRGDVYSFGVILLELVTGK 880
Y PE S + + DV+S G IL EL +
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 8e-19
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 40/234 (17%)
Query: 672 VHILEATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLS-QAKTQGHREFTAEMETL 729
+H + + + +G GG G V+ A K VA+KK+ E++ +
Sbjct: 4 IHGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALR-EIKII 62
Query: 730 GKVKHQNLVPLL------------GYCSFDEEK--LLVYEYMVNGSLDLWLRNRTGSLEV 775
++ H N+V + S E +V EYM DL G L
Sbjct: 63 RRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM---ETDLANVLEQGPLL- 118
Query: 776 LGWDKR-----YKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF-EAKVADFGLA 829
++ Y++ RGL ++H +++HRD+K +N+ +N E K+ DFGLA
Sbjct: 119 ---EEHARLFMYQL----LRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLA 168
Query: 830 RLISACETHVS--TDIAGTFGYIPPEYGQSGRSTTRG-DVYSFGVILLELVTGK 880
R++ +H ++ T Y P S + T+ D+++ G I E++TGK
Sbjct: 169 RIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 88.0 bits (218), Expect = 1e-18
Identities = 48/214 (22%), Positives = 75/214 (35%), Gaps = 39/214 (18%)
Query: 342 NLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIP--WSLGSLGGLVKLNLTGN 399
L S+ QL +P L L +N L+ + W+ L L L L+ N
Sbjct: 19 ASNILSCSKQQLPN-VPQSL--PSYTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHN 74
Query: 400 KLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSN 459
L+ +F + L +LDLS N L S++ L L L +N +
Sbjct: 75 HLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIV--------- 125
Query: 460 SAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPD----LGNLMQLEY 515
+ N F+ ++ L L L +N+ + P + L +L
Sbjct: 126 ---------VVDRNAFED--------MAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLML 167
Query: 516 LDVSRNRLCGQIPETMCSLSNL--LYLSLAENRL 547
LD+S N+L + L L L N L
Sbjct: 168 LDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPL 201
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 70.3 bits (172), Expect = 8e-13
Identities = 50/198 (25%), Positives = 77/198 (38%), Gaps = 38/198 (19%)
Query: 185 AALERLVLTNNMLKGHLPKEI--GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGN 242
+ L L++N L L E L+ L L L+ N + I +L LDL +
Sbjct: 39 SYTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97
Query: 243 NNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSY 302
N+L L +DL L+ L+L +N++ + F D++ +Q LS
Sbjct: 98 NHLHTLDEFLFSDLQALEVLLLYNNHIV----VVDRNAFE-----DMAQLQK---LYLSQ 145
Query: 303 NRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFG 362
N++S P EL ++L L LDLS N+L ++
Sbjct: 146 NQISR-FPVELIK--------------------DGNKLPKLMLLDLSSNKLKKLPLTDLQ 184
Query: 363 D--SIKLQGLYLGNNQLT 378
+ GLYL NN L
Sbjct: 185 KLPAWVKNGLYLHNNPLE 202
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 62.2 bits (151), Expect = 3e-10
Identities = 42/183 (22%), Positives = 65/183 (35%), Gaps = 31/183 (16%)
Query: 44 MESLLLSSNQFIGKIPPEI--GNCSMLKSISLSNNFLSGSIPRE-LCTSESLEEIDLDGN 100
L LS N + ++ E + L S+ LS+N L+ I E +L +DL N
Sbjct: 41 TALLDLSHNN-LSRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSSN 98
Query: 101 LLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEY-LSKLP-LMVLDLDSNNFTGIIPVSIW 158
L E +F L L+++ NHI + + L L L N + I
Sbjct: 99 HLHTLDEFLFSDLQALEVLLLYNNHI-VVVDRNAFEDMAQLQKLYLSQNQISRFPVELIK 157
Query: 159 NSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSV--LDL 216
+ L L L L++N LK ++ L A L L
Sbjct: 158 DGNKL---------------------PKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYL 196
Query: 217 NSN 219
++N
Sbjct: 197 HNN 199
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 9e-08
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 37/164 (22%)
Query: 414 ELTHLDLSFNELDGQLPS--SLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMS 471
LDLS N L +L + + + + NL L L HN L+ +S
Sbjct: 40 YTALLDLSHNNL-SRLRAEWTPTRLTNLHSLLLSHNHLN------------------FIS 80
Query: 472 NNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPD-LGNLMQLEYLDVSRNRLCGQIPE- 529
+ F + L LDL N + +L LE L + N + +
Sbjct: 81 SEAFVP--------VPNLRYLDLSSNHLH-TLDEFLFSDLQALEVLLLYNNHI-VVVDRN 130
Query: 530 TMCSLSNLLYLSLAENRL----EGMVPRSGICQNLSKISLTGNK 569
++ L L L++N++ ++ L + L+ NK
Sbjct: 131 AFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNK 174
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 6e-06
Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 16/161 (9%)
Query: 2 LSFNALSGSLPEE--LSDLPILTFAA-EKNQLSGSLPSW-LGNWNQMESLLLSSNQFIGK 57
LS N LS L E + L L N L+ + S + L LSSN +
Sbjct: 46 LSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSSNH-LHT 102
Query: 58 IPPEI-GNCSMLKSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNLLTGTIEGVFEKCSN 115
+ + + L+ + L NN + + R L+++ L N ++ + + +
Sbjct: 103 LDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNK 161
Query: 116 LSQLVIFR------NHIYGSIPEYLSKLPLMVLDLDSNNFT 150
L +L++ + + + L L L +N
Sbjct: 162 LPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 5e-04
Identities = 23/89 (25%), Positives = 33/89 (37%), Gaps = 10/89 (11%)
Query: 487 SYLTNLDLHENKFTGEIPPD--LGNLMQLEYLDVSRNRLCGQIPETM-CSLSNLLYLSLA 543
SY LDL N + + + L L L +S N L I + NL YL L+
Sbjct: 39 SYTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHL-NFISSEAFVPVPNLRYLDLS 96
Query: 544 ENRLEGMVPRSGICQNLSK---ISLTGNK 569
N L + + +L + L N
Sbjct: 97 SNHLH-TLD-EFLFSDLQALEVLLLYNNH 123
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 1e-18
Identities = 52/213 (24%), Positives = 82/213 (38%), Gaps = 34/213 (15%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVK--KLSQAKTQGHREFTAEMETLGKVKHQ-NLVPLLG 742
+G G F V + + G+ A K K + E E+ L K ++ L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 743 YCSFDEEKLLVYEYMVNGSL-DLWLRNRTGSL-EVLGWDKRYKIACGAAR----GLAFLH 796
E +L+ EY G + L L + E + G+ +LH
Sbjct: 97 VYENTSEIILILEYAAGGEIFSLCLPELAEMVSE--------NDVIRLIKQILEGVYYLH 148
Query: 797 -HGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
+ I+H D+K NILL + K+ DFG++R I +I GT Y+ P
Sbjct: 149 QNN----IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG--HACELREIMGTPEYLAP 202
Query: 853 E---YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
E Y +T D+++ G+I L+T P
Sbjct: 203 EILNYDPITTAT---DMWNIGIIAYMLLTHTSP 232
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 1e-18
Identities = 57/296 (19%), Positives = 107/296 (36%), Gaps = 73/296 (24%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGY 743
++G G G V + + A+K L R E+E + + ++V ++
Sbjct: 69 VLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPKARR---EVELHWRASQCPHIVRIVDV 123
Query: 744 C----SFDEEKLLVYEYMVNGSLDLWLRNRTGSLE--VLGWDKRY--KIACGAAR----G 791
+ + L+V E + G L D+ + + A +
Sbjct: 124 YENLYAGRKCLLIVMECLDGGEL----------FSRIQDRGDQAFTEREASEIMKSIGEA 173
Query: 792 LAFLH-HGFTPHIIHRDIKASNILLNEEFEA---KVADFGLARLISACETHVSTDIAGTF 847
+ +LH I HRD+K N+L + K+ DFG A+ ++ + T T
Sbjct: 174 IQYLHSIN----IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL--TTPCYTP 227
Query: 848 GYIPPE------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901
Y+ PE Y +S D++S GVI+ L+ G P F G + +
Sbjct: 228 YYVAPEVLGPEKYDKS------CDMWSLGVIMYILLCGYPP----FYSNHGLAISPGMKT 277
Query: 902 KMKKGQAADVLD------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+++ GQ + V + + K ++ +L+ P R T+ +
Sbjct: 278 RIRMGQ----YEFPNPEWSEV-SEEVKMLIRNLLKT-------EPTQRMTITEFMN 321
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 2e-18
Identities = 53/217 (24%), Positives = 84/217 (38%), Gaps = 40/217 (18%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVK-----KLSQAKTQGHRE-FTAEMETLGKVKHQNLVP 739
+G G F V K G A K + ++ RE E+ L +++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLA 793
L + +L+ E + G L + L + + A + G+
Sbjct: 79 LHEVYENKTDVILILELVAGGEL----------FDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 794 FLH-HGFTPHIIHRDIKASNILL-NEEFEA---KVADFGLARLISACETHVSTDIAGTFG 848
+LH I H D+K NI+L + K+ DFGLA I +I GT
Sbjct: 129 YLHSLQ----IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 849 YIPPE---YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
++ PE Y G D++S GVI L++G P
Sbjct: 183 FVAPEIVNYEPLGLEA---DMWSIGVITYILLSGASP 216
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 2e-18
Identities = 64/217 (29%), Positives = 94/217 (43%), Gaps = 27/217 (12%)
Query: 676 EATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQA---KTQGHREFTAEMETLGK 731
E + + +G G +G+V A G VAVKKLS+ R + E+ L
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKH 84
Query: 732 VKHQNLVPLL------GYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYK-I 784
+KH+N++ LL + LV M DL + L D + +
Sbjct: 85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM---GADLNNIVKCQKLT----DDHVQFL 137
Query: 785 ACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIA 844
RGL ++H + IIHRD+K SN+ +NE+ E K+ DFGLAR + T
Sbjct: 138 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTA----DEMTGYV 190
Query: 845 GTFGYIPPE-YGQSGRSTTRGDVYSFGVILLELVTGK 880
T Y PE D++S G I+ EL+TG+
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 2e-18
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 38/216 (17%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVK-----KLSQAKTQGHRE-FTAEMETLGKVKHQNLVP 739
+G G F V K G A K + ++ RE E+ L +V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRY--KIACGAAR----GLA 793
L + +L+ E + G L + L + + A + G+
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL----------FDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 794 FLHHGFTPHIIHRDIKASNILL-NEEFEA---KVADFGLARLISACETHVSTDIAGTFGY 849
+LH T I H D+K NI+L ++ K+ DFGLA I + +I GT +
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEFKNIFGTPEF 184
Query: 850 IPPE---YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
+ PE Y G D++S GVI L++G P
Sbjct: 185 VAPEIVNYEPLGLEA---DMWSIGVITYILLSGASP 217
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 86.3 bits (214), Expect = 5e-18
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 20/214 (9%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHRE---FTAEMETLGKVKH 734
++ +IG G FG V K A+K LS+ + + F E + +
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 128
Query: 735 QNLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGL 792
+V L + +F D+ L +V EYM G L + N + W + Y L
Sbjct: 129 PWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WARFY--TAEVVLAL 181
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
+H IHRD+K N+LL++ K+ADFG ++ GT YI P
Sbjct: 182 DAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 238
Query: 853 E----YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
E G G D +S GV L E++ G P
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 9e-18
Identities = 63/235 (26%), Positives = 91/235 (38%), Gaps = 60/235 (25%)
Query: 685 NIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEME---TLGKVK------- 733
+G G +G V+K+ G+ VAVKK+ A F + T ++
Sbjct: 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-------FQNSTDAQRTFREIMILTELSG 67
Query: 734 HQNLVPLLG--YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR-----YKIAC 786
H+N+V LL D + LV++YM DL R LE Y++
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILE----PVHKQYVVYQL-- 118
Query: 787 GAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGT 846
+ + +LH G ++HRD+K SNILLN E KVADFGL+R +
Sbjct: 119 --IKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSI 173
Query: 847 FGYIPPEYGQSGRST----TR-----------------GDVYSFGVILLELVTGK 880
T TR D++S G IL E++ GK
Sbjct: 174 NENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 86.7 bits (214), Expect = 1e-17
Identities = 57/273 (20%), Positives = 87/273 (31%), Gaps = 29/273 (10%)
Query: 133 YLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVL 192
+L LP L+ IW + + L R L
Sbjct: 300 WLCDLPAASLNDQLPQH---TFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLFRCEL 356
Query: 193 TNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLI--P 250
+ L E+ + L L+ + L T+ L L L+
Sbjct: 357 SVEKST-VLQSELESCKELQELEPENK-------------WCLLTIILLMRALDPLLYEK 402
Query: 251 EKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIP 310
E + + L+ + S F N V L++ L+ +
Sbjct: 403 ETLQYFSTLKAVDPMRAA----YLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLT--VL 456
Query: 311 EELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGL 370
L ++V L L++N L +P +L+ L L L S N L + +LQ L
Sbjct: 457 CHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE--NVDGVANLPRLQEL 513
Query: 371 YLGNNQLTG-SIPWSLGSLGGLVKLNLTGNKLS 402
L NN+L + L S LV LNL GN L
Sbjct: 514 LLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 86.0 bits (212), Expect = 2e-17
Identities = 43/243 (17%), Positives = 76/243 (31%), Gaps = 29/243 (11%)
Query: 201 LPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNL---SGLIPEKIADLA 257
++ L +L+ ++ EL C L L+ N L+ + L
Sbjct: 341 WCRDSATDEQLFRCELSVE-KSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLL 399
Query: 258 QLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCV 317
+ + + L P D ++
Sbjct: 400 YEKETLQYFSTLKAVDPM------------------RAAYLDDLRSKFLLENSVLKMEYA 441
Query: 318 VVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQL 377
V L L + L+ + L +L +T LDLS N+L +P L+ L +N L
Sbjct: 442 DVRVLHLAHKDLT-VLCH-LEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNAL 498
Query: 378 TGSIPWSLGSLGGLVKLNLTGNKLSG-KVPTSFGNLKELTHLDLSFNELDGQLPSSLSNI 436
++ + +L L +L L N+L + L L+L N L Q +
Sbjct: 499 E-NVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL-CQEEGIQERL 555
Query: 437 LNL 439
+
Sbjct: 556 AEM 558
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 75.2 bits (184), Expect = 5e-14
Identities = 62/349 (17%), Positives = 107/349 (30%), Gaps = 51/349 (14%)
Query: 227 YELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANM 286
E D + + LS + +++ L+L + + + + +
Sbjct: 239 AEPHDVLCCVHVSREEACLSVCFSRPLTVGSRMGTLLLMVDEAPLSVEWRTPDGRNRPSH 298
Query: 287 PDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTL 346
L + + D I S V L + L
Sbjct: 299 VWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECW----CRDSATDEQLFRC 354
Query: 347 DLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVP 406
+LS + T + SE +LQ L N +I + +L L+ T S
Sbjct: 355 ELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFS---- 409
Query: 407 TSFGNLKELTHLDLSFNELD-----GQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSA 461
LK + + ++ + + ++ L+L H L+
Sbjct: 410 ----TLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLT----------- 454
Query: 462 AWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRN 521
+ L L +T+LDL N+ +PP L L LE L S N
Sbjct: 455 -----------------VLCHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDN 496
Query: 522 RLCGQIPETMCSLSNLLYLSLAENRLEGM--VPRSGICQNLSKISLTGN 568
L + + +L L L L NRL+ + C L ++L GN
Sbjct: 497 ALE-NVDG-VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGN 543
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 73.6 bits (180), Expect = 1e-13
Identities = 43/256 (16%), Positives = 83/256 (32%), Gaps = 57/256 (22%)
Query: 287 PDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKI------------- 333
D + + +LS + + + EL SC + +L N I
Sbjct: 343 RDSATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYE 401
Query: 334 PGSLSRLTNLTTLD--------LSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSL 385
+L + L +D R++ + ++ L+L + LT + L
Sbjct: 402 KETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLT-VLC-HL 459
Query: 386 GSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQ 445
L + L+L+ N+L +P + L+ L L S N L+ + ++N+ L L L
Sbjct: 460 EQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVDG-VANLPRLQELLLC 516
Query: 446 HNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPP 505
+N+L + + L + L L+L N +
Sbjct: 517 NNRLQQ-SAAI------------------------QPLVSCPRLVLLNLQGNSLC-QEEG 550
Query: 506 DLGNLM----QLEYLD 517
L + +
Sbjct: 551 IQERLAEMLPSVSSIL 566
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 56.7 bits (136), Expect = 3e-08
Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 9/123 (7%)
Query: 26 EKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRE 85
L+ L L + L LS N+ + +PP + L+ + S+N L ++
Sbjct: 449 AHKDLT-VLCH-LEQLLLVTHLDLSHNR-LRALPPALAALRCLEVLQASDNALE-NVD-G 503
Query: 86 LCTSESLEEIDLDGNLLTGTIEGV--FEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLD 143
+ L+E+ L N L + C L L + N + +L M+
Sbjct: 504 VANLPRLQELLLCNNRLQ-QSAAIQPLVSCPRLVLLNLQGNSLC-QEEGIQERLAEMLPS 561
Query: 144 LDS 146
+ S
Sbjct: 562 VSS 564
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 50.5 bits (120), Expect = 2e-06
Identities = 35/258 (13%), Positives = 71/258 (27%), Gaps = 25/258 (9%)
Query: 320 VDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTG 379
+ + + + G G+L + + L + G L L +
Sbjct: 257 LSVCFSRPLTVGSRMGTLLLMVDEAPLSVEWRTPDGRNRPSHVWLCDLPAASLNDQLPQH 316
Query: 380 SIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNL 439
+ + L ++ ++L +LS + L S L + L
Sbjct: 317 TFRVIWTGSDSQKECVLLKDRPECW-CRDSATDEQLFRCELSVEKST-VLQSELESCKEL 374
Query: 440 VGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHE--- 496
L ++ + M +L S L +D
Sbjct: 375 QELEPENKWCL-------------LTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAY 421
Query: 497 -----NKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMV 551
+KF E + L ++ L + + L + +L L+ NRL +
Sbjct: 422 LDDLRSKFLLENSVLKMEYADVRVLHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRALP 479
Query: 552 PRSGICQNLSKISLTGNK 569
P + L + + N
Sbjct: 480 PALAALRCLEVLQASDNA 497
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 85.6 bits (212), Expect = 1e-17
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 52/241 (21%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLL 741
+IG G +G VY A K VA+KK+++ R E+ L ++K ++ L
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR-EITILNRLKSDYIIRLY 91
Query: 742 ------GYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKR----YKIACGAAR 790
FDE L +V E D L+ + L + Y + G
Sbjct: 92 DLIIPDDLLKFDE--LYIVLEIA-----DSDLKKLFKTPIFLTEEHIKTILYNLLLG--- 141
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA-CETHVSTDIAGTFGY 849
F+H IIHRD+K +N LLN++ KV DFGLAR I++ +T++ D+
Sbjct: 142 -ENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEP 197
Query: 850 IPPEYGQSGRST----TR-----------------GDVYSFGVILLELVTGKEPTGPEFK 888
P + T TR D++S G I EL+ + +
Sbjct: 198 GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPT 257
Query: 889 D 889
+
Sbjct: 258 N 258
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 83.7 bits (207), Expect = 3e-17
Identities = 44/296 (14%), Positives = 81/296 (27%), Gaps = 72/296 (24%)
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293
+ L L + + L+ + +S N++ I + F N+P L I
Sbjct: 31 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEA---DVFS--NLPKLHEI- 84
Query: 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQL 353
+ N L P + L NL L +S +
Sbjct: 85 ----------------------------RIEKANNLLYINPEAFQNLPNLQYLLISNTGI 116
Query: 354 TGPIPSEFGDSIKLQGLYLG-NNQLTGSIPWSLGSLGGL----VKLNLTGNKLSGKVPTS 408
S++ L + N + +I S GL V L L N + ++
Sbjct: 117 KHLPDVHKIHSLQKVLLDIQDNINIH-TIE--RNSFVGLSFESVILWLNKNGIQEIHNSA 173
Query: 409 FGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATM 468
F + N L+ V L + ++
Sbjct: 174 FNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH------------------ 215
Query: 469 NMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLC 524
++ + + NL L + K ++P L L+ L ++ C
Sbjct: 216 SLPSYGLE--------NLKKLRARSTYNLK---KLPT-LEKLVALMEASLTYPSHC 259
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 82.6 bits (204), Expect = 6e-17
Identities = 55/255 (21%), Positives = 88/255 (34%), Gaps = 37/255 (14%)
Query: 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSI 381
L + ++ +IP L N L +L F L+ + + N + I
Sbjct: 14 FLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVI 70
Query: 382 PWSLGSLGGLVKLN----LTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL 437
L KL+ N L P +F NL L +L +S + + L
Sbjct: 71 E--ADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSL 128
Query: 438 NLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHEN 497
V L +Q N I T+ N F G L L L++N
Sbjct: 129 QKVLLDIQDNI---------------NIHTI--ERNSFVG-----LSFE--SVILWLNKN 164
Query: 498 KFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCS-LSNLLYLSLAENRLEGMVPRSGI 556
EI N QL+ L++S N ++P + S + L ++ R+ +P S
Sbjct: 165 GIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLP-SYG 221
Query: 557 CQNLSKISLTGNKDL 571
+NL K+ +L
Sbjct: 222 LENLKKLRARSTYNL 236
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 65.6 bits (160), Expect = 2e-11
Identities = 40/217 (18%), Positives = 73/217 (33%), Gaps = 9/217 (4%)
Query: 59 PPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQ 118
I +CS + + ++ IP +L + E+ L +G F +L +
Sbjct: 3 HHRICHCS-NRVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEK 58
Query: 119 LVIFRNHIYGSIPEY-LSKLP-LMVLDL-DSNNFTGIIPVSIWNSETLMEFSAANNLLEG 175
+ I +N + I S LP L + + +NN I P + N L +N ++
Sbjct: 59 IEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKH 118
Query: 176 SLPYEVGNAAALERLVLTNNMLKGHLPKEI--GNLSALSVLDLNSNLFDGIIPYELGDCI 233
++ L + +N+ + + G +L LN N I
Sbjct: 119 LPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQ 178
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270
NNNL L + + L +S +
Sbjct: 179 LDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 64.8 bits (158), Expect = 4e-11
Identities = 34/209 (16%), Positives = 68/209 (32%), Gaps = 9/209 (4%)
Query: 68 LKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIE-GVFEKCSNLSQLVIFR-NH 125
+ L LE+I++ N + IE VF L ++ I + N+
Sbjct: 32 AIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANN 91
Query: 126 IYGSIPEYLSKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEV--G 182
+ PE LP L L + + + V +S + +N+ ++ G
Sbjct: 92 LLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVG 151
Query: 183 NAAALERLVLTNNMLKGHLPKEI-GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLG 241
+ L L N ++ + + ++N + + LD+
Sbjct: 152 LSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDIS 210
Query: 242 NNNLSGLIPEKIADLAQLQCLVLSHNNLS 270
+ L + +L +L+ S NL
Sbjct: 211 RTRIHSLPSYGLENLKKLR--ARSTYNLK 237
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 2e-05
Identities = 25/152 (16%), Positives = 47/152 (30%), Gaps = 32/152 (21%)
Query: 416 THLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLF 475
+++ ++PS L N + L KL I
Sbjct: 12 RVFLCQESKVT-EIPSDLPR--NAIELRFVLTKLR-------------VIQ--------- 46
Query: 476 DGGLPRSLGNLSYLTNLDLHENKFTGEIPPD-LGNLMQLEYLDVSRNRLCGQIPETMCS- 533
+ L +++ +N I D NL +L + + + I
Sbjct: 47 ----KGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQN 102
Query: 534 LSNLLYLSLAENRLEGMVPRSGICQNLSKISL 565
L NL YL ++ ++ +P +L K+ L
Sbjct: 103 LPNLQYLLISNTGIK-HLPDVHKIHSLQKVLL 133
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 3e-17
Identities = 45/229 (19%), Positives = 90/229 (39%), Gaps = 23/229 (10%)
Query: 321 DLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGS 380
+ + ++ P L N +L + +T + + +Q N+ + S
Sbjct: 1 ESIQRPTPINQVFP--DPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQ-S 55
Query: 381 IPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNI--LN 438
+ + L +L+L+ N++S + +L +L L ++ N L +L+ I
Sbjct: 56 LA-GMQFFTNLKELHLSHNQIS--DLSPLKDLTKLEELSVNRNRL-----KNLNGIPSAC 107
Query: 439 LVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENK 498
L L+L +N+L D L + +++ NN LG LS L LDLH N+
Sbjct: 108 LSRLFLDNNELRD-TDSLIHLK---NLEILSIRNNKLKS--IVMLGFLSKLEVLDLHGNE 161
Query: 499 FTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRL 547
T L L ++ ++D++ + + + L + + R
Sbjct: 162 IT-NTGG-LTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRW 208
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 3e-17
Identities = 49/248 (19%), Positives = 84/248 (33%), Gaps = 33/248 (13%)
Query: 205 IGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVL 264
L+ +L ++ + + + N+N+ L + L+ L L
Sbjct: 15 DPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQSL--AGMQFFTNLKELHL 70
Query: 265 SHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLL 324
SHN +S ++ L + ++ NRL + L L
Sbjct: 71 SHNQIS--------------DLSPLKDLTKLEELSVNRNRLKNLNGIPSAC---LSRLFL 113
Query: 325 NNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWS 384
+NN L L L NL L + N+L G KL+ L L N++T +
Sbjct: 114 DNNELR-DTDS-LIHLKNLEILSIRNNKLKS--IVMLGFLSKLEVLDLHGNEIT-NTG-G 167
Query: 385 LGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQL--PSSLSNILNLVGL 442
L L + ++LTG K + EL + + DG+ P +SN + V
Sbjct: 168 LTRLKKVNWIDLTGQKCVNEPVK---YQPELYITNTVKD-PDGRWISPYYISNGGSYVDG 223
Query: 443 YLQHNKLS 450
+
Sbjct: 224 CVLWELPV 231
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 5e-15
Identities = 54/290 (18%), Positives = 100/290 (34%), Gaps = 42/290 (14%)
Query: 216 LNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPS 275
+ + P + +LG +++ L+ +L+ +Q ++N+
Sbjct: 4 QRPTPINQVFP--DPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQ----- 54
Query: 276 KPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPG 335
++ + F + LS+N++S P L + +L +N N L + G
Sbjct: 55 ---------SLAGMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLK-NLNG 102
Query: 336 SLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLN 395
L+ L L N+L L+ L + NN+L SI LG L L L+
Sbjct: 103 I--PSACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLK-SIV-MLGFLSKLEVLD 156
Query: 396 LTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDE 455
L GN+++ LK++ +DL+ + + + + + P
Sbjct: 157 LHGNEIT--NTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWISPYY- 213
Query: 456 LFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSY----LTNLDLHENKFTG 501
SN + LP +SY N+ E F G
Sbjct: 214 -ISNGG--SYVDGCVLWE-----LPVYTDEVSYKFSEYINVGETEAIFDG 255
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 7e-12
Identities = 38/198 (19%), Positives = 70/198 (35%), Gaps = 40/198 (20%)
Query: 372 LGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPS 431
+ P L VK NL ++ V L + + + + + Q +
Sbjct: 4 QRPTPINQVFP--DPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNI--QSLA 57
Query: 432 SLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTN 491
+ NL L+L HN++S ++S L +L+ L
Sbjct: 58 GMQFFTNLKELHLSHNQIS------------------DLSP----------LKDLTKLEE 89
Query: 492 LDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMV 551
L ++ N+ + L L + N L + +++ L NL LS+ N+L+ +V
Sbjct: 90 LSVNRNRLK-NLNG--IPSACLSRLFLDNNEL--RDTDSLIHLKNLEILSIRNNKLKSIV 144
Query: 552 PRSGICQNLSKISLTGNK 569
L + L GN+
Sbjct: 145 MLGF-LSKLEVLDLHGNE 161
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 1e-10
Identities = 35/233 (15%), Positives = 77/233 (33%), Gaps = 16/233 (6%)
Query: 38 LGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDL 97
L + + S +++ + N+ + S+ + +L+E+ L
Sbjct: 15 DPGLANAVKQNLGKQS-VTDLVS-QKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHL 70
Query: 98 DGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSI 157
N ++ + + + L +L + RN + + L L LD+N +
Sbjct: 71 SHNQIS-DLSP-LKDLTKLEELSVNRNRL--KNLNGIPSACLSRLFLDNNELRDTDSLI- 125
Query: 158 WNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLN 217
+ + L S NN L+ S+ +G + LE L L N + + L ++ +DL
Sbjct: 126 -HLKNLEILSIRNNKLK-SIV-MLGFLSKLEVLDLHGNEITN--TGGLTRLKKVNWIDLT 180
Query: 218 SNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270
+ T+ + + P I++ +
Sbjct: 181 GQKCVNEPVKYQPELYITNTVKDPDGRW--ISPYYISNGGSYVDGCVLWELPV 231
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 84.5 bits (209), Expect = 4e-17
Identities = 50/254 (19%), Positives = 87/254 (34%), Gaps = 53/254 (20%)
Query: 676 EATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQA---KTQGHREFTAEMETLGK 731
+ + + ++IG G +G V +A + + VA+KK+ + R E+ L +
Sbjct: 50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR-EIAILNR 108
Query: 732 VKHQNLVPLL-----GYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR----Y 782
+ H ++V +L +E +V E D + + L Y
Sbjct: 109 LNHDHVVKVLDIVIPKDVEKFDELYVVLEIA-----DSDFKKLFRTPVYLTELHIKTLLY 163
Query: 783 KIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD 842
+ G+ ++H I+HRD+K +N L+N++ KV DFGLAR + E S
Sbjct: 164 NLL----VGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQL 216
Query: 843 IAGTFGYIPPEYGQSGRSTTRG---------------------------DVYSFGVILLE 875
+ DV+S G I E
Sbjct: 217 PISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAE 276
Query: 876 LVTGKEPTGPEFKD 889
L+ + D
Sbjct: 277 LLNMIKENVAYHAD 290
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 4e-17
Identities = 70/289 (24%), Positives = 117/289 (40%), Gaps = 70/289 (24%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA---EMETLGKVKHQNLVPLLG 742
+G G FG V G VAVK L++ K + E++ L +H +++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 743 YCSFDEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAAR--------GLA 793
S + +V EY+ G L D ++ ++ AR +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHG-------------RVEEMEARRLFQQILSAVD 125
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS-------ACETHVSTDIAGT 846
+ H ++HRD+K N+LL+ AK+ADFGL+ ++S +C G+
Sbjct: 126 YCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---------GS 173
Query: 847 FGYIPPE--YGQ--SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902
Y PE G+ +G D++S GVIL L+ G P F D L F+K
Sbjct: 174 PNYAAPEVISGRLYAGPEV---DIWSCGVILYALLCGTLP----FDDEHVPTL----FKK 222
Query: 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
++ G P L +++ ML++ +P R T+ + +
Sbjct: 223 IRGG---VFYIPEYLNRSVATLLMHMLQV-------DPLKRATIKDIRE 261
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 80.5 bits (199), Expect = 7e-17
Identities = 55/192 (28%), Positives = 70/192 (36%), Gaps = 38/192 (19%)
Query: 236 TTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHH 295
LDL + L+ L L +L L L +N L + +
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQT-LSA-------------------- 76
Query: 296 GVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTG 355
GVFD ELG L L NN L+ G LT L L L NQL
Sbjct: 77 GVFDD---------LTELG------TLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKS 121
Query: 356 PIPSEFGDSIKLQGLYLGNNQLTGSIPWSL-GSLGGLVKLNLTGNKLSGKVPTSFGNLKE 414
F KL+ L L NQL SIP L L L+L+ N+L +F L +
Sbjct: 122 LPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGK 180
Query: 415 LTHLDLSFNELD 426
L + L N+ D
Sbjct: 181 LQTITLFGNQFD 192
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 3e-16
Identities = 46/151 (30%), Positives = 60/151 (39%), Gaps = 4/151 (2%)
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIP 358
DL L+ + L L+ N L G LT L TL L+ NQL
Sbjct: 41 DLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPL 100
Query: 359 SEFGDSIKLQGLYLGNNQLTGSIPWSL-GSLGGLVKLNLTGNKLSGKVPTS-FGNLKELT 416
F +L LYLG NQL S+P + L L +L L N+L +P F L L
Sbjct: 101 GVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQ 158
Query: 417 HLDLSFNELDGQLPSSLSNILNLVGLYLQHN 447
L LS N+L + + L + L N
Sbjct: 159 TLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 3e-15
Identities = 52/157 (33%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSI 381
L L + L+ + LT LT L+L NQL F D +L L L NNQL S+
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SL 98
Query: 382 PWSL-GSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NL 439
P + L L KL L GN+L F L +L L L+ N+L +P+ + L NL
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL-QSIPAGAFDKLTNL 157
Query: 440 VGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFD 476
L L N+L F K+ T+ + N FD
Sbjct: 158 QTLSLSTNQLQSVPHGAFDRLG--KLQTITLFGNQFD 192
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 6e-12
Identities = 51/204 (25%), Positives = 75/204 (36%), Gaps = 39/204 (19%)
Query: 341 TNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSL-GSLGGLVKLNLTGN 399
+ LDL L + F KL L L NQL ++ + L L L L N
Sbjct: 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDDLTELGTLGLANN 93
Query: 400 KLSGKVPTS-FGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVGLYLQHNKLSGPVDELF 457
+L+ +P F +L +L L L N+L LPS + + L L L L N+L
Sbjct: 94 QLA-SLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNTNQLQ------- 144
Query: 458 SNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLD 517
++ FD L+ L L L N+ L +L+ +
Sbjct: 145 -----------SIPAGAFD--------KLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTIT 185
Query: 518 VSRNRLCGQIPETMCSLSNLLYLS 541
+ N+ CS +LYLS
Sbjct: 186 LFGNQF-------DCSRCEILYLS 202
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 8e-10
Identities = 51/206 (24%), Positives = 74/206 (35%), Gaps = 33/206 (16%)
Query: 342 NLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKL 401
+D L +PS G + L L + L + L L LNL N+L
Sbjct: 15 GKKEVDCQGKSLDS-VPS--GIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQL 71
Query: 402 SGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVGLYLQHNKLSGPVDELFSNS 460
F +L EL L L+ N+L LP + + L L LYL N+L
Sbjct: 72 QTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKS--------- 121
Query: 461 AAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDL-GNLMQLEYLDVS 519
+ + +FD L+ L L L+ N+ IP L L+ L +S
Sbjct: 122 ---------LPSGVFDR--------LTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLS 163
Query: 520 RNRLCGQIPETMCSLSNLLYLSLAEN 545
N+L L L ++L N
Sbjct: 164 TNQLQSVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 2 LSFNALSGSLPEELSDLPILTFAA-EKNQLSGSLPSWLGNW-NQMESLLLSSNQFIGKIP 59
L L+ L LT+ + NQL +L + + + ++ +L L++NQ + +P
Sbjct: 42 LQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDDLTELGTLGLANNQ-LASLP 99
Query: 60 PEI-GNCSMLKSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNLLTGTIEGVFEKCSNLS 117
+ + + L + L N L S+P + L+E+ L+ N L G F+K +NL
Sbjct: 100 LGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQ 158
Query: 118 QLVIFRNHIYGSIPE 132
L + N + S+P
Sbjct: 159 TLSLSTNQL-QSVPH 172
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 34/156 (21%), Positives = 56/156 (35%), Gaps = 52/156 (33%)
Query: 393 KLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVGLYLQHNKLSG 451
KL+L L+ +F L +LT L+L +N+L L + + + L L L L +N+L+
Sbjct: 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQL-QTLSAGVFDDLTELGTLGLANNQLA- 96
Query: 452 PVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLM 511
++ +FD L+ L L L N+ +P +
Sbjct: 97 -----------------SLPLGVFDH--------LTQLDKLYLGGNQLK-SLPSGV---- 126
Query: 512 QLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRL 547
D L+ L L L N+L
Sbjct: 127 ----FD---------------RLTKLKELRLNTNQL 143
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 11/160 (6%)
Query: 69 KSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYG 128
+ + L + L+ L ++LD N L GVF+ + L L + N +
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-A 96
Query: 129 SIPE----YLSKLPLMVLDLDSNNFTGIIPVSIWNSET-LMEFSAANNLLEGSLPYEVGN 183
S+P +L++ L L L N +P +++ T L E N L+ S+P +
Sbjct: 97 SLPLGVFDHLTQ--LDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFD 152
Query: 184 A-AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFD 222
L+ L L+ N L+ L L + L N FD
Sbjct: 153 KLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 8e-17
Identities = 46/231 (19%), Positives = 88/231 (38%), Gaps = 57/231 (24%)
Query: 676 EATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK- 733
+++ +G G + V++A + + + V VK L K + + ++K
Sbjct: 33 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK---------KIKREIKI 83
Query: 734 ------HQNLVPLL----GYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR-- 781
N++ L S LV+E++ N + T D R
Sbjct: 84 LENLRGGPNIITLADIVKDPVSRTP--ALVFEHVNNTDFKQLYQTLTDY------DIRFY 135
Query: 782 -YKIACGAARGLAFLH-HGFTPHIIHRDIKASNILLNEEF-EAKVADFGLARLISACETH 838
Y+I + L + H G I+HRD+K N++++ E + ++ D+GLA + +
Sbjct: 136 MYEI----LKALDYCHSMG----IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY 187
Query: 839 VSTDIAGTFGYIPPE-------YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
+ + PE Y D++S G +L ++ KEP
Sbjct: 188 --NVRVASRYFKGPELLVDYQMY------DYSLDMWSLGCMLASMIFRKEP 230
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 1e-16
Identities = 78/277 (28%), Positives = 117/277 (42%), Gaps = 50/277 (18%)
Query: 687 IGDGGFGTVY---KAALPD-GKTVAVKKLSQAKTQGHREFTAEMET----LGKVKHQN-L 737
+G G +G V+ K + D GK A+K L +A + T T L ++ L
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 738 VPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYK-----IACGAAR 790
V L + +F E KL L+ +Y+ G L L R E + I
Sbjct: 122 VTL--HYAFQTETKLHLILDYINGGELFTHLSQRERFTE-----HEVQIYVGEIVL---- 170
Query: 791 GLAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGY 849
L LH G II+RDIK NILL+ + DFGL++ A ET + D GT Y
Sbjct: 171 ALEHLHKLG----IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEY 226
Query: 850 IPPE---YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906
+ P+ G SG D +S GV++ EL+TG P F N + +++ K
Sbjct: 227 MAPDIVRGGDSGHDKAV-DWWSLGVLMYELLTGASP----FTVDGEKNSQAEISRRILKS 281
Query: 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMR 943
+ P ++A +K +++ L L +P R
Sbjct: 282 ---EPPYPQEMSALAK-DLIQRL------LMKDPKKR 308
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 2e-16
Identities = 72/359 (20%), Positives = 114/359 (31%), Gaps = 52/359 (14%)
Query: 234 SLTTLDLGNNNLSGL-IPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFI 292
+ +LD+ LS E + L Q Q + L L+ SS R P L+ +
Sbjct: 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALR--VNPALAEL 61
Query: 293 QHHGVFDLSYNRLSGPIPEELGSCVVVVD-----LLLNNNMLSGK----IPGSLSRLTNL 343
+L N L + + L L N L+G + +L L L
Sbjct: 62 ------NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTL 115
Query: 344 TTLDLSRNQLTGPIPSEFGDSI-----KLQGLYLGNNQLT----GSIPWSLGSLGGLVKL 394
L LS N L + + +L+ L L L+ + L + +L
Sbjct: 116 QELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKEL 175
Query: 395 NLTGNKLSGKVPTSFG-----NLKELTHLDLSFNELDGQ----LPSSLSNILNLVGLYLQ 445
++ N ++ + +L L L + L +++ +L L L
Sbjct: 176 TVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALG 235
Query: 446 HNKLSGPVDELFSNSAA---WKIATMNMSNNLFD----GGLPRSLGNLSYLTNLDLHENK 498
NKL ++ T+ + G L R L L L L N+
Sbjct: 236 SNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNE 295
Query: 499 FTGEIPPDLGNLM-----QLEYLDVSRNRL----CGQIPETMCSLSNLLYLSLAENRLE 548
E L + QLE L V C + LL L ++ NRLE
Sbjct: 296 LGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLE 354
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 6e-16
Identities = 74/486 (15%), Positives = 144/486 (29%), Gaps = 99/486 (20%)
Query: 68 LKSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNLLTGT----IEGVFEKCSNLSQLVIF 122
++S+ + LS + EL + + + LD LT I L++L +
Sbjct: 5 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 64
Query: 123 RNHIYGSIPEYLSK------LPLMVLDLDSNNFT----GIIPVSIWNSETLMEFSAANNL 172
N + + + + L L + T G++ ++ TL E ++NL
Sbjct: 65 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL 124
Query: 173 LEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGI----IPYE 228
L + L +L L L L +
Sbjct: 125 LGDA------GLQLLCEGLLDPQ-------------CRLEKLQLEYCSLSAASCEPLASV 165
Query: 229 LGDCISLTTLDLGNNNLSGLIPEKIADL-----AQLQCLVLSHNNLSGPIPSKPSSYFRQ 283
L L + NN+++ + QL+ L L ++ S
Sbjct: 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVT----SDNCRDLCG 221
Query: 284 ANMPDLSFIQHHGVFDLSYNRLSGP-----IPEELGSCVVVVDLLLNNNMLSGK----IP 334
++ L N+L P L + L + ++ K +
Sbjct: 222 I----VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277
Query: 335 GSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK-----LQGLYLGNNQLTG----SIPWSL 385
L +L L L+ N+L +++ L+ L++ + T L
Sbjct: 278 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVL 337
Query: 386 GSLGGLVKLNLTGNKLSGKVPTSFG-----NLKELTHLDLSFNELDGQLPSSLSNIL--- 437
L++L ++ N+L L L L+ ++ SSL+ L
Sbjct: 338 AQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLAN 397
Query: 438 -NLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHE 496
+L L L +N L ++ ++ L L L++
Sbjct: 398 HSLRELDLSNNCL--------GDAGILQLVESVRQPG-------------CLLEQLVLYD 436
Query: 497 NKFTGE 502
++ E
Sbjct: 437 IYWSEE 442
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 2e-15
Identities = 70/393 (17%), Positives = 121/393 (30%), Gaps = 60/393 (15%)
Query: 208 LSALSVLDLNSNLFD----GIIPYELGDCISLTTLDLGNNNLSGLIPEKIADL-----AQ 258
L V+ L+ I L +L L+L +N L + + +
Sbjct: 27 LQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCK 86
Query: 259 LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGS--- 315
+Q L L + L+G SS R +P L + LS N L + L
Sbjct: 87 IQKLSLQNCCLTGAGCGVLSSTLR--TLPTLQEL------HLSDNLLGDAGLQLLCEGLL 138
Query: 316 --CVVVVDLLLNNNMLSGK----IPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK--- 366
+ L L LS + L + L +S N + +K
Sbjct: 139 DPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSP 198
Query: 367 --LQGLYLGNNQLT----GSIPWSLGSLGGLVKLNLTGNKLSGK-----VPTSFGNLKEL 415
L+ L L + +T + + S L +L L NKL P L
Sbjct: 199 CQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRL 258
Query: 416 THLDLSFNELDGQLPSSLSNIL----NLVGLYLQHNKLSGPVDELFSNSAA---WKIATM 468
L + + + L +L +L L L N+L L + ++ ++
Sbjct: 259 RTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESL 318
Query: 469 NMSNN-LFDGG---LPRSLGNLSYLTNLDLHENKFTGEIPPDLG-----NLMQLEYLDVS 519
+ + L +L L + N+ +L L L ++
Sbjct: 319 WVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLA 378
Query: 520 RNRL----CGQIPETMCSLSNLLYLSLAENRLE 548
+ C + T+ + +L L L+ N L
Sbjct: 379 DCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 5e-12
Identities = 69/459 (15%), Positives = 132/459 (28%), Gaps = 98/459 (21%)
Query: 42 NQMESLLLSSNQF----IGKIPPEIGNCSMLKSISLSNNFLSGSIPRELC-----TSESL 92
Q + + L I + L ++L +N L + S +
Sbjct: 28 QQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKI 87
Query: 93 EEIDLDGNLLTGT----IEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL------PLMVL 142
+++ L LTG + L +L + N + + + L + L L
Sbjct: 88 QKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKL 147
Query: 143 DLDSNNFTGIIPVSIW----NSETLMEFSAANN--------LLEGSLPYEVGNAAALERL 190
L+ + + + E + +NN +L L + LE L
Sbjct: 148 QLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKD---SPCQLEAL 204
Query: 191 VLTNNMLK----GHLPKEIGNLSALSVLDLNSNLFDG-----IIPYELGDCISLTTLDLG 241
L + + L + + ++L L L SN + P L L TL +
Sbjct: 205 KLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIW 264
Query: 242 NNNLS----GLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGV 297
++ G + + L+ L L+ N L + L
Sbjct: 265 ECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPG-CQLE------S 317
Query: 298 FDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPI 357
+ + S L++ L L +S N+L
Sbjct: 318 LWVKSCSFTAACCSHFSSV--------------------LAQNRFLLELQISNNRLEDAG 357
Query: 358 PSEFGDSIK-----LQGLYLGNNQLT----GSIPWSLGSLGGLVKLNLTGNKLSG----- 403
E + L+ L+L + ++ S+ +L + L +L+L+ N L
Sbjct: 358 VRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQ 417
Query: 404 -----KVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL 437
+ P L L L ++ L +
Sbjct: 418 LVESVRQPGCL-----LEQLVLYDIYWSEEMEDRLQALE 451
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 2e-11
Identities = 46/237 (19%), Positives = 81/237 (34%), Gaps = 30/237 (12%)
Query: 341 TNLTTLDLSRNQLTGPIPSEFGDSIK-LQGLYLGNNQLT----GSIPWSLGSLGGLVKLN 395
++ +LD+ +L+ +E ++ Q + L + LT I +L L +LN
Sbjct: 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 62
Query: 396 LTGNKLSGKVPTSFGN-LKE----LTHLDLSFNELDGQ----LPSSLSNILNLVGLYLQH 446
L N+L L+ + L L L G L S+L + L L+L
Sbjct: 63 LRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSD 122
Query: 447 NKLSGPVDELFSNSAA---WKIATMNMSNNLFD----GGLPRSLGNLSYLTNLDLHENKF 499
N L +L ++ + + L L L + N
Sbjct: 123 NLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDI 182
Query: 500 TGE----IPPDLG-NLMQLEYLDVSRNRL----CGQIPETMCSLSNLLYLSLAENRL 547
+ L + QLE L + + C + + S ++L L+L N+L
Sbjct: 183 NEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKL 239
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 2e-16
Identities = 41/155 (26%), Positives = 60/155 (38%), Gaps = 26/155 (16%)
Query: 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSI 381
+ L N + PG+ S L +DLS NQ++ P F L L L N++T +
Sbjct: 37 IRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-EL 95
Query: 382 PWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVG 441
P SL F L L L L+ N+++ + ++ NL
Sbjct: 96 PKSL-----------------------FEGLFSLQLLLLNANKINCLRVDAFQDLHNLNL 132
Query: 442 LYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFD 476
L L NKL FS I TM+++ N F
Sbjct: 133 LSLYDNKLQTIAKGTFSPLR--AIQTMHLAQNPFI 165
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 3e-15
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 2/129 (1%)
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIP 358
L N + P + + L+NN +S P + L +L +L L N++T
Sbjct: 38 RLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPK 97
Query: 359 SEFGDSIKLQGLYLGNNQLTGSIP-WSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTH 417
S F LQ L L N++ + + L L L+L NKL +F L+ +
Sbjct: 98 SLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQT 156
Query: 418 LDLSFNELD 426
+ L+ N
Sbjct: 157 MHLAQNPFI 165
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 2e-13
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 38/167 (22%)
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293
++T + L N + + P + +L+ + LS+N +S +
Sbjct: 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISE-LAP------------------ 73
Query: 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQL 353
F L L S L+L N ++ L +L L L+ N++
Sbjct: 74 --DAFQ----GLR-----SLNS------LVLYGNKITELPKSLFEGLFSLQLLLLNANKI 116
Query: 354 TGPIPSE-FGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGN 399
+ + F D L L L +N+L + L + ++L N
Sbjct: 117 NC-LRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 1e-11
Identities = 38/171 (22%), Positives = 56/171 (32%), Gaps = 42/171 (24%)
Query: 213 VLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGP 272
+ L N I P L +DL NN +S L P+ L L LVL N ++
Sbjct: 36 EIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITE- 94
Query: 273 IPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGK 332
+P +F+ L + LLLN N ++
Sbjct: 95 LPK--------------------SLFE----GLFS-----------LQLLLLNANKINCL 119
Query: 333 IPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPW 383
+ L NL L L N+L F +Q ++L N P+
Sbjct: 120 RVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN------PF 164
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 2e-10
Identities = 42/205 (20%), Positives = 71/205 (34%), Gaps = 55/205 (26%)
Query: 342 NLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKL 401
+ +D LT IP+ ++I + L N + P + L +++L+ N++
Sbjct: 12 SNNIVDCRGKGLTE-IPTNLPETI--TEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQI 68
Query: 402 SGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSA 461
S P +F L+ L L L N++ +LP
Sbjct: 69 SELAPDAFQGLRSLNSLVLYGNKIT-ELPK------------------------------ 97
Query: 462 AWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDL-GNLMQLEYLDVSR 520
+LF+G L L L L+ NK + D +L L L +
Sbjct: 98 -----------SLFEG--------LFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYD 137
Query: 521 NRLCGQIPETMCSLSNLLYLSLAEN 545
N+L T L + + LA+N
Sbjct: 138 NKLQTIAKGTFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
Query: 141 VLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEV-GNAAALERLVLTNNMLKG 199
+ L+ N I P + + L +NN + L + +L LVL N +
Sbjct: 36 EIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRSLNSLVLYGNKIT- 93
Query: 200 HLPKEI-GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQ 258
LPK + L +L +L LN+N + + D +L L L +N L + + L
Sbjct: 94 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 153
Query: 259 LQCLVLSHN 267
+Q + L+ N
Sbjct: 154 IQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 7e-05
Identities = 30/136 (22%), Positives = 49/136 (36%), Gaps = 31/136 (22%)
Query: 91 SLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYL-SKLP-LMVLDLDSNN 148
L IDL N ++ F+ +L+ LV++ N I +P+ L L L +L L++N
Sbjct: 57 KLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI-TELPKSLFEGLFSLQLLLLNANK 115
Query: 149 FTGIIPVSIWNSETLMEFSAANNLLEGSLPYEV-GNAAALERLVLTNNMLKGHLPKEI-G 206
L + + L L L +N L+ + K
Sbjct: 116 IN-------------------------CLRVDAFQDLHNLNLLSLYDNKLQ-TIAKGTFS 149
Query: 207 NLSALSVLDLNSNLFD 222
L A+ + L N F
Sbjct: 150 PLRAIQTMHLAQNPFI 165
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 3e-16
Identities = 62/289 (21%), Positives = 119/289 (41%), Gaps = 71/289 (24%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA---EMETLGKVKHQNLVPLLG 742
+G+G FG V A + VA+K +S+ + E+ L ++H +++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 743 YCSFDEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAAR--------GLA 793
+ + ++V EY G L D + + ++ R +
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKK-------------RMTEDEGRRFFQQIICAIE 122
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS-------ACETHVSTDIAGT 846
+ H I+HRD+K N+LL++ K+ADFGL+ +++ +C G+
Sbjct: 123 YCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---------GS 170
Query: 847 FGYIPPE--YGQ--SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902
Y PE G+ +G DV+S G++L ++ G+ P F D NL F+K
Sbjct: 171 PNYAAPEVINGKLYAGPEV---DVWSCGIVLYVMLVGRLP----FDDEFIPNL----FKK 219
Query: 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+ + P L+ ++ ++ +M+ +P R T+ + +
Sbjct: 220 VNSC---VYVMPDFLSPGAQSLIRRMIVA-------DPMQRITIQEIRR 258
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 79.5 bits (197), Expect = 5e-16
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 34/213 (15%)
Query: 687 IGDGGFGTVY---KAALPD-GKTVAVKKLSQA---KTQGHREFT-AEMETLGKVKHQNLV 738
+G GG+G V+ K + GK A+K L +A + T AE L +VKH +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 739 PLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
L +F KL L+ EY+ G L + L +E + +A + L LH
Sbjct: 85 DL--IYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED---TACFYLAE-ISMALGHLH 138
Query: 797 -HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE-- 853
G II+RD+K NI+LN + K+ DFGL + S + V+ GT Y+ PE
Sbjct: 139 QKG----IIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHTFCGTIEYMAPEIL 193
Query: 854 ----YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
+ ++ D +S G ++ +++TG P
Sbjct: 194 MRSGHNRA------VDWWSLGALMYDMLTGAPP 220
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 80.5 bits (199), Expect = 5e-16
Identities = 57/216 (26%), Positives = 92/216 (42%), Gaps = 31/216 (14%)
Query: 680 NFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFT---AEMETLGKVKHQ 735
+ K ++G G FG V G+ A+K L + E E L +H
Sbjct: 151 EYLK--LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 208
Query: 736 NLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWL-RNRTGSLEVLGWDKRYKIACGAARGL 792
L L SF ++L V EY G L L R R S + R+ A + L
Sbjct: 209 FLTAL--KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED----RARFYGAEIVS-AL 261
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
+LH ++++RD+K N++L+++ K+ DFGL + + T GT Y+ P
Sbjct: 262 DYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAP 318
Query: 853 E------YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
E YG++ D + GV++ E++ G+ P
Sbjct: 319 EVLEDNDYGRA------VDWWGLGVVMYEMMCGRLP 348
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 78.7 bits (195), Expect = 7e-16
Identities = 67/211 (31%), Positives = 100/211 (47%), Gaps = 32/211 (15%)
Query: 687 IGDGGFGTVY---KAALPD-GKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPL 740
+G G FG V+ K + D + A+K L +A K + E + L +V H +V L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 741 LGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH-H 797
+ +F E KL L+ +++ G L L E D ++ +A A L LH
Sbjct: 92 --HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE---DVKFYLAE-LALALDHLHSL 145
Query: 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE---- 853
G II+RD+K NILL+EE K+ DFGL++ E + GT Y+ PE
Sbjct: 146 G----IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNR 200
Query: 854 --YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
+ QS D +SFGV++ E++TG P
Sbjct: 201 RGHTQS------ADWWSFGVLMFEMLTGTLP 225
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 79.2 bits (195), Expect = 8e-16
Identities = 52/180 (28%), Positives = 77/180 (42%), Gaps = 41/180 (22%)
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFG 848
A+G+ FL + IHRD+ A NILL+E+ K+ DFGLAR I +V
Sbjct: 203 AKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV----RKGDA 255
Query: 849 YIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP-----TGPEF-KDIEGGNLV 896
+P PE T + DV+SFGV+L E+ + G P EF + ++ G
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-- 313
Query: 897 GWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+M+ P T + ML DC P+ RPT +++ L +
Sbjct: 314 -----RMRA--------PDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGNL 353
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 66.1 bits (161), Expect = 1e-11
Identities = 46/195 (23%), Positives = 73/195 (37%), Gaps = 32/195 (16%)
Query: 653 EPLSINIAMFEQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAAL------PDGKTV 706
E L + + +E P RL L L G G FG V +A +TV
Sbjct: 8 ERLPYDASKWEFPRDRLKLGKPL------------GRGAFGQVIEADAFGIDKTATCRTV 55
Query: 707 AVKKL-SQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCS-FDEEKLLVYEYMVNGSLD 763
AVK L A HR +E++ L + H N+V LLG C+ +++ E+ G+L
Sbjct: 56 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 115
Query: 764 LWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823
+LR++ R + +G F I D+K + +
Sbjct: 116 TYLRSK-----------RNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSAS 164
Query: 824 ADFGLARLISACETH 838
+ F + +S E
Sbjct: 165 SGFVEEKSLSDVEEE 179
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 80.2 bits (198), Expect = 9e-16
Identities = 71/289 (24%), Positives = 116/289 (40%), Gaps = 70/289 (24%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA---EMETLGKVKHQNLVPLLG 742
+G G FG V G VAVK L++ K + E++ L +H +++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 743 YCSFDEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAAR--------GLA 793
S + +V EY+ G L D +N ++ +R G+
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNG-------------RLDEKESRRLFQQILSGVD 130
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS-------ACETHVSTDIAGT 846
+ H ++HRD+K N+LL+ AK+ADFGL+ ++S +C G+
Sbjct: 131 YCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---------GS 178
Query: 847 FGYIPPE--YGQ--SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902
Y PE G+ +G D++S GVIL L+ G P F D L F+K
Sbjct: 179 PNYAAPEVISGRLYAGPEV---DIWSSGVILYALLCGTLP----FDDDHVPTL----FKK 227
Query: 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+ G P L ++ ML++ +P R T+ + +
Sbjct: 228 ICDG---IFYTPQYLNPSVISLLKHMLQV-------DPMKRATIKDIRE 266
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 1e-15
Identities = 55/211 (26%), Positives = 87/211 (41%), Gaps = 21/211 (9%)
Query: 679 NNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFT---AEMETLGKVKH 734
+ F + +G G FG V G A+K L + K ++ E L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 735 QNLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKI-ACGAARG 791
LV L SF D L +V EY+ G + LR R G + + A
Sbjct: 101 PFLVKL--EFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS----EPHARFYAAQIVLT 153
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
+LH +I+RD+K N+L++++ +V DFG A+ + + T + GT +
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWT-LCGTPEALA 206
Query: 852 PEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
PE S D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 1e-15
Identities = 26/130 (20%), Positives = 53/130 (40%), Gaps = 3/130 (2%)
Query: 299 DLSYNRLSG-PIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPI 357
L+ N + + + +NN ++ G+ + + + L+ N+L
Sbjct: 38 RLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQ 97
Query: 358 PSEFGDSIKLQGLYLGNNQLTGSIPW-SLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELT 416
F L+ L L +N++T + S L + L+L N+++ P +F L L+
Sbjct: 98 HKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLS 156
Query: 417 HLDLSFNELD 426
L+L N +
Sbjct: 157 TLNLLANPFN 166
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 3e-15
Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 3/137 (2%)
Query: 341 TNLTTLDLSRNQLTG-PIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGN 399
L L+ N+ T F +L+ + NN++T + G+ ++ LT N
Sbjct: 32 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91
Query: 400 KLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSN 459
+L F L+ L L L N + S + ++ L L N+++ F
Sbjct: 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDT 151
Query: 460 SAAWKIATMNMSNNLFD 476
++T+N+ N F+
Sbjct: 152 LH--SLSTLNLLANPFN 166
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 7e-14
Identities = 40/168 (23%), Positives = 61/168 (36%), Gaps = 39/168 (23%)
Query: 234 SLTTLDLGNNNLSGLIPEKI-ADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFI 292
L L NN + L I L QL+ + S+N ++ I
Sbjct: 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITD-IEE----------------- 74
Query: 293 QHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQ 352
G F+ SG V ++LL +N L L +L TL L N+
Sbjct: 75 ---GAFE----GASG-----------VNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 116
Query: 353 LTGPIPSEFGDSIKLQGLYLGNNQLTGSIPW-SLGSLGGLVKLNLTGN 399
+T F ++ L L +NQ+T ++ + +L L LNL N
Sbjct: 117 ITCVGNDSFIGLSSVRLLSLYDNQIT-TVAPGAFDTLHSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 5e-11
Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 31/156 (19%)
Query: 393 KLNLTGNKLSGKVPT-SFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSG 451
+L L N+ + T F L +L ++ S N++ + + + L N+L
Sbjct: 36 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLE- 94
Query: 452 PVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDL-GNL 510
N+ + +F G L L L L N+ T + D L
Sbjct: 95 -----------------NVQHKMFKG--------LESLKTLMLRSNRIT-CVGNDSFIGL 128
Query: 511 MQLEYLDVSRNRLCGQIPE-TMCSLSNLLYLSLAEN 545
+ L + N++ + +L +L L+L N
Sbjct: 129 SSVRLLSLYDNQI-TTVAPGAFDTLHSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 4e-06
Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 5/130 (3%)
Query: 141 VLDLDSNNFTGIIPVSIWNSET-LMEFSAANNLLEGSLPYEV-GNAAALERLVLTNNMLK 198
L L++N FT + I+ L + + +NN + + A+ + ++LT+N L+
Sbjct: 36 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT-DIEEGAFEGASGVNEILLTSNRLE 94
Query: 199 GHLPKEI-GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLA 257
+ ++ L +L L L SN + S+ L L +N ++ + P L
Sbjct: 95 N-VQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLH 153
Query: 258 QLQCLVLSHN 267
L L L N
Sbjct: 154 SLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 9e-06
Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 32/159 (20%)
Query: 69 KSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIY 127
+ L+NN + + L +I+ N +T EG FE S ++++++ N +
Sbjct: 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRL- 93
Query: 128 GSIPEYL-SKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNA- 184
++ + L L L L SN T + +
Sbjct: 94 ENVQHKMFKGLESLKTLMLRSNRIT-------------------------CVGNDSFIGL 128
Query: 185 AALERLVLTNNMLKGHLPKEI-GNLSALSVLDLNSNLFD 222
+++ L L +N + + L +LS L+L +N F+
Sbjct: 129 SSVRLLSLYDNQIT-TVAPGAFDTLHSLSTLNLLANPFN 166
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 9e-06
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 8/113 (7%)
Query: 45 ESLLLSSNQFIGKIPPEIG--NCSMLKSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNL 101
L L++N+ + L+ I+ SNN ++ I + EI L N
Sbjct: 35 AELRLNNNE-FTVLEATGIFKKLPQLRKINFSNNKIT-DIEEGAFEGASGVNEILLTSNR 92
Query: 102 LTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYL-SKLP-LMVLDLDSNNFTGI 152
L +F+ +L L++ N I + L + +L L N T +
Sbjct: 93 LENVQHKMFKGLESLKTLMLRSNRI-TCVGNDSFIGLSSVRLLSLYDNQITTV 144
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 3e-15
Identities = 40/241 (16%), Positives = 83/241 (34%), Gaps = 40/241 (16%)
Query: 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYEL-GDCISLTTLDLGNN 243
+ + L L L+ NL +S + ++ ++ + + +T +++ N
Sbjct: 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNT 90
Query: 244 N-LSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSY 302
L+ + P+ + +L L+ L + + L PDL+ + +F +
Sbjct: 91 RNLTYIDPDALKELPLLKFLGIFNTGLK--------------MFPDLTKVYSTDIFFILE 136
Query: 303 NRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLT-TLDLSRNQLTGPIPSEF 361
+ +N ++ + L N T TL L N T +
Sbjct: 137 --------------------ITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS-VQGYA 175
Query: 362 GDSIKLQGLYLGNNQLTGSIPWSL--GSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLD 419
+ KL +YL N+ I G G L+++ ++ +LKEL +
Sbjct: 176 FNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGLEHLKELIARN 235
Query: 420 L 420
Sbjct: 236 T 236
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 6e-15
Identities = 37/235 (15%), Positives = 75/235 (31%), Gaps = 34/235 (14%)
Query: 340 LTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYL-GNNQLTGSIPWSLGSLGGLVKLNLTG 398
+ TL L L F + + +Y+ + L S +L + + +
Sbjct: 30 PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRN 89
Query: 399 NK-LSGKVPTSFGNLKELTHLDLSFNELDGQLP--SSLSNILNLVGLYLQHNKLSGPVDE 455
+ L+ P + L L L + L P + + + L + N +
Sbjct: 90 TRNLTYIDPDALKELPLLKFLGIFNTGL-KMFPDLTKVYSTDIFFILEITDNPYMTSI-- 146
Query: 456 LFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEY 515
N F G L N L L+ N FT + N +L+
Sbjct: 147 ---------------PVNAFQG-----LCNE--TLTLKLYNNGFT-SVQGYAFNGTKLDA 183
Query: 516 LDVSRNRLCGQIPETMCS--LSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGN 568
+ +++N+ I + S L +++ + +P S ++L ++
Sbjct: 184 VYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALP-SKGLEHLKELIARNT 236
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 2e-13
Identities = 36/226 (15%), Positives = 72/226 (31%), Gaps = 48/226 (21%)
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293
S TL L +L + ++L + + +S + + S F N+ ++ I+
Sbjct: 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDV---TLQQLESHSFY--NLSKVTHIE 86
Query: 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQL 353
+ N L+ P +L L L L + L
Sbjct: 87 -----------------------------IRNTRNLTYIDPDALKELPLLKFLGIFNTGL 117
Query: 354 TG-PIPSEFGDSIKLQGLYLGNNQLTGSIP----WSLGSLGGLVKLNLTGNKLSGKVPTS 408
P ++ + L + +N SIP L + + L L N + V
Sbjct: 118 KMFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNE--TLTLKLYNNGFT-SVQGY 174
Query: 409 FGNLKELTHLDLSFNELDGQLP----SSLSNILNLVGLYLQHNKLS 450
N +L + L+ N+ + + + +L L + ++
Sbjct: 175 AFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSL--LDVSQTSVT 218
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 42/266 (15%), Positives = 79/266 (29%), Gaps = 61/266 (22%)
Query: 10 SLPEELSDLPILTFAAEKNQLSGSLPSW-LGNWNQMESLLLSSNQFIGKIPPEI-GNCSM 67
+P L + L ++PS N + + +S + + ++ N S
Sbjct: 25 RIPSLPPSTQTLKL--IETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSK 81
Query: 68 LKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIY 127
+ I + N I ++ L L IF +
Sbjct: 82 VTHIEIRNTRNLTYIDP-----------------------DALKELPLLKFLGIFNTGL- 117
Query: 128 GSIPEYL---SKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNA 184
P+ S +L++ N + IPV+ F N
Sbjct: 118 KMFPDLTKVYSTDIFFILEITDNPYMTSIPVNA--------FQGLCNE------------ 157
Query: 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYEL--GDCISLTTLDLGN 242
L L NN + N + L + LN N + +I + G + LD+
Sbjct: 158 --TLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQ 214
Query: 243 NNLSGLIPEKIADLAQLQCLVLSHNN 268
+++ L + + L +L + N
Sbjct: 215 TSVTALPSKGLEHLKELI----ARNT 236
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 6e-08
Identities = 42/296 (14%), Positives = 81/296 (27%), Gaps = 69/296 (23%)
Query: 59 PPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQ 118
C + ++ + IP S + + L L F N+S+
Sbjct: 4 SSPPCECHQEEDFRVTCKDIQ-RIPS---LPPSTQTLKLIETHLRTIPSHAFSNLPNISR 59
Query: 119 LVIFRNHIYGSIPEYL-SKLP-LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGS 176
+ + + + + L + +++ + I
Sbjct: 60 IYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDA--------LK--------E 103
Query: 177 LPYEVGNAAALERLVLTNNMLKGHLPKE--IGNLSALSVLDLNSNLFDGIIPYEL--GDC 232
LP L+ L + N LK P + + +L++ N + IP G C
Sbjct: 104 LP-------LLKFLGIFNTGLK-MFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLC 155
Query: 233 ISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFI 292
TL L NN + + + +L + L+ N L+ I
Sbjct: 156 NETLTLKLYNNGFTS-VQGYAFNGTKLDAVYLNKNK-------------------YLTVI 195
Query: 293 QHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDL 348
F Y+ S L ++ ++ L L L +
Sbjct: 196 -DKDAFGGVYSGPS--------------LLDVSQTSVTALPSKGLEHLKELIARNT 236
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 8e-05
Identities = 12/96 (12%), Positives = 36/96 (37%), Gaps = 4/96 (4%)
Query: 480 PRSLGNLSYLTNLDLHENKFTGEIPPDL-GNLMQLEYLDVSRNRLCGQIP-ETMCSLSNL 537
+ NL ++ + + + ++ NL ++ ++++ R I + + L L
Sbjct: 48 SHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLL 107
Query: 538 LYLSLAENRLEGMVPRSGI--CQNLSKISLTGNKDL 571
+L + L+ + + + +T N +
Sbjct: 108 KFLGIFNTGLKMFPDLTKVYSTDIFFILEITDNPYM 143
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 4e-15
Identities = 64/296 (21%), Positives = 110/296 (37%), Gaps = 65/296 (21%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA-EMETLGKVKHQNLVPLLGYC 744
+G+G +G V A + VAVK + + E E+ + H+N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAAR--------GLAFLH 796
+ L EY G L + G E A+ G+ +LH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQRFFHQLMAGVVYLH 122
Query: 797 -HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIA-----GTFGYI 850
G I HRDIK N+LL+E K++DFGL + + + + GT Y+
Sbjct: 123 GIG----ITHRDIKPENLLLDERDNLKISDFGL----ATVFRYNNRERLLNKMCGTLPYV 174
Query: 851 PPE------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904
PE + DV+S G++L ++ G+ P + + +
Sbjct: 175 APELLKRREF--HAEPV---DVWSCGIVLTAMLAGELP----WDQ--PSDSCQEYSDWKE 223
Query: 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK---FLKEIK 957
K + + + ++ K+L NP+ R T+ + K + K +K
Sbjct: 224 KKTY--LNPWKKIDSAPLALLHKILVE-------NPSARITIPDIKKDRWYNKPLK 270
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 4e-15
Identities = 49/210 (23%), Positives = 78/210 (37%), Gaps = 46/210 (21%)
Query: 321 DLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGS 380
L ++ + + L ++ + + + + ++ L LG N+L
Sbjct: 23 KANLKKKSVT-DAV-TQNELNSIDQIIANNSDIKSVQG--IQYLPNVRYLALGGNKLH-- 76
Query: 381 IPWSLG---SLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL 437
+ L L L LTGN+L F L L L L N+L LP + + L
Sbjct: 77 ---DISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKL 132
Query: 438 -NLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHE 496
NL L L HN+L ++ +FD L+ LT LDL
Sbjct: 133 TNLTYLNLAHNQLQ------------------SLPKGVFD--------KLTNLTELDLSY 166
Query: 497 NKFTGEIPP---DLGNLMQLEYLDVSRNRL 523
N+ +P D L QL+ L + +N+L
Sbjct: 167 NQLQ-SLPEGVFD--KLTQLKDLRLYQNQL 193
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 1e-12
Identities = 62/246 (25%), Positives = 84/246 (34%), Gaps = 80/246 (32%)
Query: 186 ALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSN------LFDGIIPYELGDCISLTTLD 239
++++++ N+ +K I L + L L N + +LT L
Sbjct: 42 SIDQIIANNSDIKSVQG--IQYLPNVRYLALGGNKLHDISALKELT--------NLTYLI 91
Query: 240 LGNNNLSGLIPEKIAD-LAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVF 298
L N L L P + D L L+ LVL N L S P GVF
Sbjct: 92 LTGNQLQSL-PNGVFDKLTNLKELVLVENQLQ----SLPD-----------------GVF 129
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIP 358
D L L L +N L G +LTNLT LDLS NQL +P
Sbjct: 130 DK---------LTNLT------YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-LP 173
Query: 359 SEFGDSI-KLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTH 417
D + +L+ L L NQL S+P F L L +
Sbjct: 174 EGVFDKLTQLKDLRLYQNQLK-SVPDG-----------------------VFDRLTSLQY 209
Query: 418 LDLSFN 423
+ L N
Sbjct: 210 IWLHDN 215
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 4e-12
Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 43/234 (18%)
Query: 341 TNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNK 400
+L + +T + + + + N+ + S+ + L + L L GNK
Sbjct: 19 AETIKANLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNK 74
Query: 401 LSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVGLYLQHNKLSGPVDELFSN 459
L + + L LT+L L+ N+L LP+ + + L NL L L N+L
Sbjct: 75 LH-DIS-ALKELTNLTYLILTGNQL-QSLPNGVFDKLTNLKELVLVENQLQ--------- 122
Query: 460 SAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDL-GNLMQLEYLDV 518
++ + +FD L+ LT L+L N+ +P + L L LD+
Sbjct: 123 ---------SLPDGVFD--------KLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDL 164
Query: 519 SRNRLCGQIPETMC-SLSNLLYLSLAENRLEGMVPRSGICQNLSK---ISLTGN 568
S N+L +PE + L+ L L L +N+L+ VP G+ L+ I L N
Sbjct: 165 SYNQL-QSLPEGVFDKLTQLKDLRLYQNQLKS-VPD-GVFDRLTSLQYIWLHDN 215
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 3e-07
Identities = 43/208 (20%), Positives = 77/208 (37%), Gaps = 45/208 (21%)
Query: 345 TLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGK 404
T+ +S P + L +T + L + ++ + + K
Sbjct: 2 TITVSTPIKQI-FPD--DAFAETIKANLKKKSVT-DAV-TQNELNSIDQIIANNSDI--K 54
Query: 405 VPTSFGNLKELTHLDLSFNELDGQLPSSLS---NILNLVGLYLQHNKLSGPVDELFSNSA 461
L + +L L N+L +S + NL L L N+L
Sbjct: 55 SVQGIQYLPNVRYLALGGNKL-----HDISALKELTNLTYLILTGNQLQ----------- 98
Query: 462 AWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGN-LMQLEYLDVSR 520
++ N +FD L+ L L L EN+ +P + + L L YL+++
Sbjct: 99 -------SLPNGVFDK--------LTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAH 142
Query: 521 NRLCGQIPETMC-SLSNLLYLSLAENRL 547
N+L +P+ + L+NL L L+ N+L
Sbjct: 143 NQL-QSLPKGVFDKLTNLTELDLSYNQL 169
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 7e-05
Identities = 57/232 (24%), Positives = 80/232 (34%), Gaps = 60/232 (25%)
Query: 142 LDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHL 201
+L + T + + NS + + ++ + Y + L L N L
Sbjct: 24 ANLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLP----NVRYLALGGNKLH--- 76
Query: 202 PKEIG---NLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIAD-LA 257
+I L+ L+ L L N + +L L L N L L P+ + D L
Sbjct: 77 --DISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSL-PDGVFDKLT 133
Query: 258 QLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFD---------LSYNRLSGP 308
L L L+HN L S P GVFD LSYN+L
Sbjct: 134 NLTYLNLAHNQLQ----SLPK-----------------GVFDKLTNLTELDLSYNQLQS- 171
Query: 309 IPEELGSCVVVVD-------LLLNNNMLSGKIP-GSLSRLTNLTTLDLSRNQ 352
+PE V D L L N L +P G RLT+L + L N
Sbjct: 172 LPEG------VFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDNP 216
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 9e-15
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 39/218 (17%)
Query: 680 NFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAK--TQGHREFT-AEMETLGKVKHQ 735
+T +G G FG V+ +G+ A+K L + E T E L V H
Sbjct: 9 QILRT--LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 736 NLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYK-----IACGA 788
++ + + +F D +++ ++ +Y+ G L LR ++ + K +
Sbjct: 67 FIIRM--WGTFQDAQQIFMIMDYIEGGELFSLLR-KSQRFP----NPVAKFYAAEVCLA- 118
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF- 847
L +LH II+RD+K NILL++ K+ DFG A+ + D+ T
Sbjct: 119 ---LEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP--------DVTYTLC 164
Query: 848 G---YIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
G YI PE + D +SFG+++ E++ G P
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 1e-14
Identities = 64/296 (21%), Positives = 110/296 (37%), Gaps = 65/296 (21%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA-EMETLGKVKHQNLVPLLGYC 744
+G+G +G V A + VAVK + + E E+ + H+N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAAR--------GLAFLH 796
+ L EY G L + G E A+ G+ +LH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQRFFHQLMAGVVYLH 122
Query: 797 -HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIA-----GTFGYI 850
G I HRDIK N+LL+E K++DFGL + + + + GT Y+
Sbjct: 123 GIG----ITHRDIKPENLLLDERDNLKISDFGL----ATVFRYNNRERLLNKMCGTLPYV 174
Query: 851 PPE------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904
PE + DV+S G++L ++ G+ P + + +
Sbjct: 175 APELLKRREF--HAEPV---DVWSCGIVLTAMLAGELP----WDQ--PSDSCQEYSDWKE 223
Query: 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK---FLKEIK 957
K + + + ++ K+L NP+ R T+ + K + K +K
Sbjct: 224 KKTY--LNPWKKIDSAPLALLHKILVE-------NPSARITIPDIKKDRWYNKPLK 270
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 5e-14
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 34/217 (15%)
Query: 680 NFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFT---AEMETLGKVKHQ 735
++ K ++G G FG V G+ A+K L + E E L +H
Sbjct: 8 DYLK--LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 736 NLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWL-RNRTGSLEVLGWDKRYKIACGAARGL 792
L L +F ++L V EY G L L R R + E R+ A L
Sbjct: 66 FLTAL--KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE----RARFYGAE-IVSAL 118
Query: 793 AFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
+LH +++RDIK N++L+++ K+ DFGL + + + T GT Y+
Sbjct: 119 EYLHSRD----VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLA 173
Query: 852 PE------YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
PE YG++ D + GV++ E++ G+ P
Sbjct: 174 PEVLEDNDYGRA------VDWWGLGVVMYEMMCGRLP 204
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 6e-14
Identities = 70/326 (21%), Positives = 121/326 (37%), Gaps = 52/326 (15%)
Query: 625 SDPEEIEETKLNSFSDHNLYFLSSSRSKEPLSINIAMFEQPLMRLTLVHILEATNNFCKT 684
+ + + + + S +E ++N + L L + +
Sbjct: 5 HHHHHHDYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDF-----DLLR- 58
Query: 685 NIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFT---AEMETLGKV-KHQNLVP 739
+IG G + V L + A++ + + + E + H LV
Sbjct: 59 -VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 740 LLGYCSF-DEEKL-LVYEYMVNGSLDLWL-RNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
L + F E +L V EY+ G L + R R E R+ A + L +LH
Sbjct: 118 L--HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE----HARFYSAE-ISLALNYLH 170
Query: 797 -HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF-G---YIP 851
G II+RD+K N+LL+ E K+ D+G+ + E D TF G YI
Sbjct: 171 ERG----IIYRDLKLDNVLLDSEGHIKLTDYGMCK-----EGLRPGDTTSTFCGTPNYIA 221
Query: 852 PE------YGQSGRSTTRGDVYSFGVILLELVTGKEP-TGPEFKDIEGGNLVGWVFQKMK 904
PE YG S D ++ GV++ E++ G+ P D N ++FQ +
Sbjct: 222 PEILRGEDYGFS------VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 275
Query: 905 KGQAADVLDPTVLTADSKPMMLKMLR 930
+ + P L+ + ++ L
Sbjct: 276 EK---QIRIPRSLSVKAASVLKSFLN 298
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 6e-14
Identities = 42/128 (32%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIP 358
DL N L + L L N L G ++LT+LT L+LS NQL +P
Sbjct: 34 DLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQS-LP 92
Query: 359 SEFGDSI-KLQGLYLGNNQLTGSIPWSL-GSLGGLVKLNLTGNKLSGKVPT-SFGNLKEL 415
+ D + +L+ L L NQL S+P + L L L L N+L VP F L L
Sbjct: 93 NGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSL 150
Query: 416 THLDLSFN 423
++ L N
Sbjct: 151 QYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 2e-12
Identities = 36/126 (28%), Positives = 46/126 (36%)
Query: 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSI 381
L L N L G LT+LT L L N+L F L L L NQL
Sbjct: 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLP 92
Query: 382 PWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVG 441
L L +L L N+L F L +L L L N+L + +L
Sbjct: 93 NGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQY 152
Query: 442 LYLQHN 447
++L N
Sbjct: 153 IWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 7e-10
Identities = 40/137 (29%), Positives = 56/137 (40%), Gaps = 4/137 (2%)
Query: 341 TNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNK 400
T LDL N L F + L LYLG N+L L L LNL+ N+
Sbjct: 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87
Query: 401 LSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVGLYLQHNKLSGPVDELFSN 459
L F L +L L L+ N+L LP + + L L L L N+L D +F
Sbjct: 88 LQSLPNGVFDKLTQLKELALNTNQL-QSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDR 146
Query: 460 SAAWKIATMNMSNNLFD 476
+ + + +N +D
Sbjct: 147 LT--SLQYIWLHDNPWD 161
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 5e-09
Identities = 50/173 (28%), Positives = 66/173 (38%), Gaps = 46/173 (26%)
Query: 213 VLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIAD-LAQLQCLVLSHNNLSG 271
LDL +N + + SLT L LG N L L P + + L L L LS N L
Sbjct: 32 YLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSL-PNGVFNKLTSLTYLNLSTNQLQ- 89
Query: 272 PIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSG 331
S P+ GVFD +L + +L LN N L
Sbjct: 90 ---SLPN-----------------GVFD----KL-----------TQLKELALNTNQLQS 114
Query: 332 KIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK-LQGLYLGNNQLTGSIPW 383
G +LT L L L +NQL +P D + LQ ++L +N PW
Sbjct: 115 LPDGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDN------PW 160
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 1e-06
Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 36/158 (22%)
Query: 393 KLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVGLYLQHNKLSG 451
L+L N L F L LT L L N+L LP+ + N L +L L L N+L
Sbjct: 32 YLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQ- 89
Query: 452 PVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPP---DLG 508
++ N +FD L+ L L L+ N+ +P D
Sbjct: 90 -----------------SLPNGVFD--------KLTQLKELALNTNQLQ-SLPDGVFD-- 121
Query: 509 NLMQLEYLDVSRNRLCGQIPE-TMCSLSNLLYLSLAEN 545
L QL+ L + +N+L +P+ L++L Y+ L +N
Sbjct: 122 KLTQLKDLRLYQNQL-KSVPDGVFDRLTSLQYIWLHDN 158
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 1e-13
Identities = 62/293 (21%), Positives = 105/293 (35%), Gaps = 55/293 (18%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTA-EMETLGKVKHQNLVPLLGYC 744
IG G FG + VAVK + + E E+ ++H N+V
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIE--RGAAIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHII 804
++ EY G L + N E ++ G+++ H I
Sbjct: 86 LTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS----GVSYCHS---MQIC 138
Query: 805 HRDIKASNILLNEEFEA--KVADFGLA-------RLISACETHVSTDIAGTFGYIPPE-- 853
HRD+K N LL+ K+ DFG + + S GT YI PE
Sbjct: 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV---------GTPAYIAPEVL 189
Query: 854 ----YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909
Y G+ DV+S GV L ++ G P F+D E Q++ + +
Sbjct: 190 LRQEY--DGKIA---DVWSCGVTLYVMLVGAYP----FEDPEEPRDYRKTIQRILSVKYS 240
Query: 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK---FLKEIKVE 959
+ D ++ + ++ ++ +PA R ++ + FLK + +
Sbjct: 241 -IPDDIRISPECCHLISRIFVA-------DPATRISIPEIKTHSWFLKNLPAD 285
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 1e-13
Identities = 64/270 (23%), Positives = 107/270 (39%), Gaps = 45/270 (16%)
Query: 680 NFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFT---AEMETLGKV-KH 734
+ + +IG G + V L + A+K + + + E + H
Sbjct: 12 DLLR--VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 735 QNLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGL 792
LV L + F E +L V EY+ G L ++ + E R+ A + L
Sbjct: 70 PFLVGL--HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE---HARFYSAE-ISLAL 123
Query: 793 AFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF-G-- 848
+LH G II+RD+K N+LL+ E K+ D+G+ + E D TF G
Sbjct: 124 NYLHERG----IIYRDLKLDNVLLDSEGHIKLTDYGMCK-----EGLRPGDTTSTFCGTP 174
Query: 849 -YIPPE------YGQSGRSTTRGDVYSFGVILLELVTGKEP-TGPEFKDIEGGNLVGWVF 900
YI PE YG S D ++ GV++ E++ G+ P D N ++F
Sbjct: 175 NYIAPEILRGEDYGFS------VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 228
Query: 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLR 930
Q + + + P L+ + ++ L
Sbjct: 229 QVILEK---QIRIPRSLSVKAASVLKSFLN 255
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 73.1 bits (179), Expect = 2e-13
Identities = 70/278 (25%), Positives = 111/278 (39%), Gaps = 51/278 (18%)
Query: 680 NFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFT---AEMETLGKV-KH 734
NF ++G G FG V + + AVK L + + E L K
Sbjct: 344 NFLM--VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 735 QNLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGL 792
L L + F ++L V EY+ G L ++ E + A A GL
Sbjct: 402 PFLTQL--HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP---HAVFYAAE-IAIGL 455
Query: 793 AFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
FL G II+RD+K N++L+ E K+ADFG+ + T GT YI
Sbjct: 456 FFLQSKG----IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT-FCGTPDYIA 510
Query: 852 PE------YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK 905
PE YG+S D ++FGV+L E++ G+ P F+ G +FQ + +
Sbjct: 511 PEIIAYQPYGKS------VDWWAFGVLLYEMLAGQAP----FE----GEDEDELFQSIME 556
Query: 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMR 943
+V P ++ ++ + ++ +P R
Sbjct: 557 H---NVAYPKSMSKEAVAICKGLMT-------KHPGKR 584
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 2e-13
Identities = 66/218 (30%), Positives = 93/218 (42%), Gaps = 35/218 (16%)
Query: 680 NFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFT---AEMETLGK-VKH 734
+F K +IG G FG V A AVK L + +E +E L K VKH
Sbjct: 41 HFLK--VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 735 QNLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKI-ACGAARG 791
LV L + SF +KL V +Y+ G L L+ LE R + A A
Sbjct: 99 PFLVGL--HFSFQTADKLYFVLDYINGGELFYHLQRERCFLE-----PRARFYAAEIASA 151
Query: 792 LAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYI 850
L +LH I++RD+K NILL+ + + DFGL + + ST GT Y+
Sbjct: 152 LGYLHSLN----IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST-FCGTPEYL 206
Query: 851 PPE------YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
PE Y ++ D + G +L E++ G P
Sbjct: 207 APEVLHKQPYDRT------VDWWCLGAVLYEMLYGLPP 238
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 2e-13
Identities = 53/295 (17%), Positives = 97/295 (32%), Gaps = 92/295 (31%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGY 743
++G G G V + + A+K L R E+E + + ++V ++
Sbjct: 25 VLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPKARR---EVELHWRASQCPHIVRIVDV 79
Query: 744 C----SFDEEKLLVYEYMVNGSLDLWLRNRTGSLE--VLGWDKRY--KIACGAAR----G 791
+ + L+V E + G L D+ + + A +
Sbjct: 80 YENLYAGRKCLLIVMECLDGGEL----------FSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 792 LAFLH-HGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAGTF 847
+ +LH I HRD+K N+L K+ DFG A
Sbjct: 130 IQYLHSIN----IAHRDVKPENLLYTSKRPNAILKLTDFGFA------------------ 167
Query: 848 GYIPPE-----YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902
E Y +S D++S GVI+ L+ G P F G + + +
Sbjct: 168 ----KETTGEKYDKS------CDMWSLGVIMYILLCGYPP----FYSNHGLAISPGMKTR 213
Query: 903 MKKGQAADVLD------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
++ GQ + V + + K ++ +L+ P R T+ +
Sbjct: 214 IRMGQ----YEFPNPEWSEV-SEEVKMLIRNLLKT-------EPTQRMTITEFMN 256
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 3e-13
Identities = 35/103 (33%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSI 381
L L +N L G +LT LT L LS+NQ+ F KL LYL N+L S+
Sbjct: 33 LELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQ-SL 91
Query: 382 PWSL-GSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN 423
P + L L +L L N+L F L L + L N
Sbjct: 92 PNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 134
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 4e-10
Identities = 28/107 (26%), Positives = 40/107 (37%)
Query: 341 TNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNK 400
++ T L+L N+L F +L L L NQ+ L L L L NK
Sbjct: 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87
Query: 401 LSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHN 447
L F L +L L L N+L + +L ++L N
Sbjct: 88 LQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 134
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 3e-07
Identities = 41/149 (27%), Positives = 52/149 (34%), Gaps = 44/149 (29%)
Query: 236 TTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHH 295
T L+L +N L L L QL L LS N + S P
Sbjct: 31 TRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ----SLPD----------------- 69
Query: 296 GVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTG 355
GVFD +L + L L+ N L G +LT L L L NQL
Sbjct: 70 GVFD----KL-----------TKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKS 114
Query: 356 PIPSEFGDSIK-LQGLYLGNNQLTGSIPW 383
+P D + LQ ++L N PW
Sbjct: 115 -VPDGIFDRLTSLQKIWLHTN------PW 136
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 1e-12
Identities = 61/393 (15%), Positives = 108/393 (27%), Gaps = 96/393 (24%)
Query: 205 IGNLSALSVLDLNSNLFDG----IIPYELGDCISLTTLDLGNNNLSG----LIPEKIADL 256
+ S + L + + L + S+ + L N + + E IA
Sbjct: 1 MARFS-IEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASK 59
Query: 257 AQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSC 316
L+ S + + L + L C
Sbjct: 60 KDLEIAEFSDIFTG-----------------RVKDEIPEALRLLL---------QALLKC 93
Query: 317 VVVVDLLLNNNMLSGK----IPGSLSRLTNLTTLDLSRNQLT-------------GPIPS 359
+ + L++N + LS+ T L L L N L +
Sbjct: 94 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNK 153
Query: 360 EFGDSIKLQGLYLGNNQLT--GSIPWS--LGSLGGLVKLNLTGNKLSGK-----VPTSFG 410
+ ++ L+ + G N+L W+ S L + + N + + +
Sbjct: 154 KAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLA 213
Query: 411 NLKELTHLDLSFNELDGQ----LPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIA 466
+EL LDL N L +L + NL L L LS A +
Sbjct: 214 YCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLS--------ARGAAAVV 265
Query: 467 TMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLG-----NLMQLEYLDVSRN 521
L N+ L L L N+ + L + L +L+++ N
Sbjct: 266 DAF-----------SKLENIG-LQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGN 313
Query: 522 RL------CGQIPETMCSLSNLLYLSLAENRLE 548
R +I E + L +
Sbjct: 314 RFSEEDDVVDEIREVFSTRGRGELDELDDMEEL 346
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 2e-10
Identities = 56/364 (15%), Positives = 103/364 (28%), Gaps = 82/364 (22%)
Query: 234 SLTTLDLGNNNLSG----LIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDL 289
S+ L + ++ + + + ++ +VLS N + G ++ S + DL
Sbjct: 5 SIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTI-GTEAARWLSENIASK-KDL 62
Query: 290 SFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLS 349
+ S E + +++ LL L T+ LS
Sbjct: 63 EIA------EFSDIFTGRVKDEIPEALRLLLQALLKC--------------PKLHTVRLS 102
Query: 350 RNQLTGPIPSEFGDSIK----LQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKV 405
N D + L+ LYL NN L P + + ++ K
Sbjct: 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG---PQAGAKIARALQELAVNKKAKNA- 158
Query: 406 PTSFGNLKELTHLDLSFNELDGQ----LPSSLSNILNLVGLYLQHNKLSGPVDELFSNSA 461
L + N L+ + + L + + N +
Sbjct: 159 -------PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIR-------PEGI 204
Query: 462 AWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGE----IPPDLGNLMQLEYLD 517
+ L L LDL +N FT + L + L L
Sbjct: 205 EHLLL--------------EGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 250
Query: 518 VSRNRL----CGQIPETMCSLSN--LLYLSLAENRL--EGMVP----RSGICQNLSKISL 565
++ L + + L N L L L N + + + +L + L
Sbjct: 251 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLEL 310
Query: 566 TGNK 569
GN+
Sbjct: 311 NGNR 314
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 2e-09
Identities = 49/273 (17%), Positives = 88/273 (32%), Gaps = 53/273 (19%)
Query: 200 HLPKEIGNLSALSVLDLNSNLF--DGIIPYE--LGDCISLTTLDLGNNNLSGLIPEKIAD 255
L + + L + L+ N F P L L L L NN L P+ A
Sbjct: 85 LLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG---PQAGAK 141
Query: 256 LAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGP----IPE 311
+A+ L ++ + N P L NRL +
Sbjct: 142 IAR----ALQELAVNK----------KAKNAPPLR------SIICGRNRLENGSMKEWAK 181
Query: 312 ELGSCVVVVDLLLNNNMLSGK-----IPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK 366
S ++ + + N + + + L+ L LDL N T S ++K
Sbjct: 182 TFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALK 241
Query: 367 ----LQGLYLGNNQLTG----SIPWSLGSLG--GLVKLNLTGNKLSGKVPTSFG-----N 411
L+ L L + L+ ++ + L GL L L N++ +
Sbjct: 242 SWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEK 301
Query: 412 LKELTHLDLSFNEL--DGQLPSSLSNILNLVGL 442
+ +L L+L+ N + + + + + G
Sbjct: 302 MPDLLFLELNGNRFSEEDDVVDEIREVFSTRGR 334
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 3e-04
Identities = 48/250 (19%), Positives = 84/250 (33%), Gaps = 42/250 (16%)
Query: 15 LSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQF----IGKIPPEIGNCSMLKS 70
SD+ E + L L ++ ++ LS N F + + + L+
Sbjct: 67 FSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEH 126
Query: 71 ISLSNNFLS-------------GSIPRELCTSESLEEIDLDGNLLTG----TIEGVFEKC 113
+ L NN L ++ ++ + L I N L F+
Sbjct: 127 LYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSH 186
Query: 114 SNLSQLVIFRNHIY-----GSIPEYLSKLP-LMVLDLDSNNFT--GIIPVS--IWNSETL 163
L + + +N I + E L+ L VLDL N FT G ++ + + L
Sbjct: 187 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNL 246
Query: 164 MEFSAANNLL--EGSLP----YEVGNAAALERLVLTNNMLKGHLPKEIG-----NLSALS 212
E + LL G+ + L+ L L N ++ + + + L
Sbjct: 247 RELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLL 306
Query: 213 VLDLNSNLFD 222
L+LN N F
Sbjct: 307 FLELNGNRFS 316
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 69.0 bits (168), Expect = 1e-12
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 3/107 (2%)
Query: 344 TTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPW-SLGSLGGLVKLNLTGNKLS 402
+ L +R+ + L LY+ N Q + L LG L L + + L
Sbjct: 11 SGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR 69
Query: 403 GKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKL 449
P +F L+ L+LSFN L+ L L+L L L N L
Sbjct: 70 FVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 57.1 bits (137), Expect = 1e-08
Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 2/100 (2%)
Query: 303 NRLSGPIPEELGSCVVVVDLLLNNNMLSGKIP-GSLSRLTNLTTLDLSRNQLTGPIPSEF 361
+ L + +L + N + L L L L + ++ L P F
Sbjct: 17 RDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAF 76
Query: 362 GDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKL 401
+ +L L L N L S+ W L +L L+GN L
Sbjct: 77 HFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 53.2 bits (127), Expect = 2e-07
Identities = 20/147 (13%), Positives = 38/147 (25%), Gaps = 37/147 (25%)
Query: 232 CISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSF 291
+ L + + L L + + + + R + +L
Sbjct: 7 PHGSSGLRCTRDGALD-SLHHLPGAENLTELYIENQQHLQHLELRD---LR--GLGELR- 59
Query: 292 IQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRN 351
+L + + L P + L+ L+LS N
Sbjct: 60 -----------------------------NLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90
Query: 352 QLTGPIPSEFGDSIKLQGLYLGNNQLT 378
L + + + LQ L L N L
Sbjct: 91 ALES-LSWKTVQGLSLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 52.4 bits (125), Expect = 3e-07
Identities = 16/101 (15%), Positives = 28/101 (27%), Gaps = 4/101 (3%)
Query: 374 NNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPT-SFGNLKELTHLDLSFNELDGQLPSS 432
L L +L + + + L EL +L + + L P +
Sbjct: 16 TRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75
Query: 433 LSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNN 473
L L L N L + + + +S N
Sbjct: 76 FHFTPRLSRLNLSFNALESLSWKTVQG---LSLQELVLSGN 113
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 52.0 bits (124), Expect = 5e-07
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 480 PRSLGNLSYLTNLDLHENKFTGEIPP-DLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLL 538
L LT L + + + DL L +L L + ++ L P+ L
Sbjct: 24 LHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLS 83
Query: 539 YLSLAENRLEGMVPRSGICQNLSKISLTGNKDLC 572
L+L+ N LE + ++ +L ++ L+GN C
Sbjct: 84 RLNLSFNALESLSWKTVQGLSLQELVLSGNPLHC 117
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 49.4 bits (117), Expect = 3e-06
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Query: 176 SLPYEVGNAAALERLVLTNNMLKGHLPKE-IGNLSALSVLDLNSNLFDGIIPYELGDCIS 234
+ + A L L + N HL + L L L + + + P
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPR 81
Query: 235 LTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNL 269
L+ L+L N L L + + L LQ LVLS N L
Sbjct: 82 LSRLNLSFNALESLSWKTVQGL-SLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 47.4 bits (112), Expect = 1e-05
Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 28/119 (23%)
Query: 430 PSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYL 489
L NL LY+++ + ++ R L L L
Sbjct: 24 LHHLPGAENLTELYIENQQHLQHLE-------------------------LRDLRGLGEL 58
Query: 490 TNLDLHENKFTGEIPPD-LGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRL 547
NL + ++ + PD +L L++S N L + +L L L+ N L
Sbjct: 59 RNLTIVKSGLR-FVAPDAFHFTPRLSRLNLSFNAL-ESLSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 6e-05
Identities = 14/101 (13%), Positives = 36/101 (35%), Gaps = 4/101 (3%)
Query: 28 NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPE-IGNCSMLKSISLSNNFLSGSIPRE- 85
+ L + L + + Q + + + L+++++ + L + +
Sbjct: 17 RDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDA 75
Query: 86 LCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHI 126
+ L ++L N L + S L +LV+ N +
Sbjct: 76 FHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 45.1 bits (106), Expect = 7e-05
Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Query: 202 PKEIGNLSALSVLDLNSNLFDGIIPYE-LGDCISLTTLDLGNNNLSGLIPEKIADLAQLQ 260
+ L+ L + + + L L L + + L + P+ +L
Sbjct: 24 LHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLS 83
Query: 261 CLVLSHNNLS 270
L LS N L
Sbjct: 84 RLNLSFNALE 93
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 44.3 bits (104), Expect = 1e-04
Identities = 13/93 (13%), Positives = 28/93 (30%), Gaps = 5/93 (5%)
Query: 65 CSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIE-GVFEKCSNLSQLVIFR 123
+ + + L +E+L E+ ++ +E L L I +
Sbjct: 7 PHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVK 65
Query: 124 NHIYGSIPEY-LSKLP-LMVLDLDSNNFTGIIP 154
+ + + P L L+L N +
Sbjct: 66 SGL-RFVAPDAFHFTPRLSRLNLSFNALESLSW 97
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 44.0 bits (103), Expect = 2e-04
Identities = 14/94 (14%), Positives = 26/94 (27%), Gaps = 1/94 (1%)
Query: 58 IPPEIGNCSMLKSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNLLTGTIEGVFEKCSNL 116
+ L + + N + L + + + L F L
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRL 82
Query: 117 SQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFT 150
S+L + N + + + L L L L N
Sbjct: 83 SRLNLSFNALESLSWKTVQGLSLQELVLSGNPLH 116
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 2e-12
Identities = 62/221 (28%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 680 NFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFT---AEMETLGKV-KH 734
K ++G G FG V+ A + A+K L + + E L +H
Sbjct: 20 ILHK--MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 77
Query: 735 QNLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGL 792
L + +C+F +E L V EY+ G L +++ + A GL
Sbjct: 78 PFLTHM--FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS---RATFYAAE-IILGL 131
Query: 793 AFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF-G-- 848
FLH G I++RD+K NILL+++ K+ADFG+ + E + TF G
Sbjct: 132 QFLHSKG----IVYRDLKLDNILLDKDGHIKIADFGMCK-----ENMLGDAKTNTFCGTP 182
Query: 849 -YIPPE------YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
YI PE Y S D +SFGV+L E++ G+ P
Sbjct: 183 DYIAPEILLGQKYNHS------VDWWSFGVLLYEMLIGQSP 217
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 2e-12
Identities = 61/217 (28%), Positives = 92/217 (42%), Gaps = 33/217 (15%)
Query: 680 NFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFT---AEMETLGKV-KH 734
NF ++G G FG V + + AVK L + + E L K
Sbjct: 23 NFLM--VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 735 QNLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGL 792
L L + F ++L V EY+ G L ++ E + A A GL
Sbjct: 81 PFLTQL--HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP---HAVFYAAE-IAIGL 134
Query: 793 AFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
FL G II+RD+K N++L+ E K+ADFG+ + + + + GT YI
Sbjct: 135 FFLQSKG----IIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKTFCGTPDYIA 189
Query: 852 PE------YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
PE YG+S D ++FGV+L E++ G+ P
Sbjct: 190 PEIIAYQPYGKS------VDWWAFGVLLYEMLAGQAP 220
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 6e-12
Identities = 62/217 (28%), Positives = 91/217 (41%), Gaps = 33/217 (15%)
Query: 680 NFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFT---AEMETLGKV-KH 734
F + ++G G FG V A + + G AVK L + + E L H
Sbjct: 26 EFIR--VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 735 QNLVPLLGYCSF-DEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGL 792
L L +C F ++L V E++ G L ++ E R+ A L
Sbjct: 84 PFLTQL--FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEA---RARFYAAE-IISAL 137
Query: 793 AFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
FLH G II+RD+K N+LL+ E K+ADFG+ + C + GT YI
Sbjct: 138 MFLHDKG----IIYRDLKLDNVLLDHEGHCKLADFGMCKE-GICNGVTTATFCGTPDYIA 192
Query: 852 PE------YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
PE YG + D ++ GV+L E++ G P
Sbjct: 193 PEILQEMLYGPA------VDWWAMGVLLYEMLCGHAP 223
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 9e-12
Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 3/136 (2%)
Query: 341 TNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNK 400
TN L L NQ+T P F I L+ LYLG+NQL SL L L+L N+
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99
Query: 401 LSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNS 460
L+ F L L L + N+L +LP + + +L L L N+L F
Sbjct: 100 LTVLPSAVFDRLVHLKELFMCCNKL-TELPRGIERLTHLTHLALDQNQLKSIPHGAFDRL 158
Query: 461 AAWKIATMNMSNNLFD 476
+ + + N +D
Sbjct: 159 S--SLTHAYLFGNPWD 172
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 2e-11
Identities = 46/188 (24%), Positives = 59/188 (31%), Gaps = 61/188 (32%)
Query: 236 TTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHH 295
L L +N ++ L P L L+ L L N L + P
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG----ALPV----------------- 81
Query: 296 GVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTG 355
GVFD L+ +L L L N L+ RL +L L + N+LT
Sbjct: 82 GVFD----SLT-----QLT------VLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTE 126
Query: 356 PIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKEL 415
+P L L L NQL SIP +F L L
Sbjct: 127 -LPRGIERLTHLTHLALDQNQLK-SIPHG-----------------------AFDRLSSL 161
Query: 416 THLDLSFN 423
TH L N
Sbjct: 162 THAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 4e-09
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 29/154 (18%)
Query: 393 KLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVGLYLQHNKLSG 451
L L N+++ P F +L L L L N+L LP + + L L L L N+L+
Sbjct: 44 ILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTNQLT- 101
Query: 452 PVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLM 511
+ + +FD L +L L + NK T E+P + L
Sbjct: 102 -----------------VLPSAVFD--------RLVHLKELFMCCNKLT-ELPRGIERLT 135
Query: 512 QLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAEN 545
L +L + +N+L LS+L + L N
Sbjct: 136 HLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 1e-11
Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 27/129 (20%)
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIP 358
L N+ + +P+EL + + + L+NN +S S S +T L TL LS N+L IP
Sbjct: 37 YLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRC-IP 94
Query: 359 SEFGDSI-KLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTH 417
D + L+ L L N ++ +P +F +L L+H
Sbjct: 95 PRTFDGLKSLRLLSLHGNDIS-VVPEG-----------------------AFNDLSALSH 130
Query: 418 LDLSFNELD 426
L + N L
Sbjct: 131 LAIGANPLY 139
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 2e-10
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 341 TNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNK 400
++T L L NQ T +P E + L + L NN+++ S ++ L+ L L+ N+
Sbjct: 31 RDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89
Query: 401 LSGKVPTSFGNLKELTHLDLSFNEL 425
L P +F LK L L L N++
Sbjct: 90 LRCIPPRTFDGLKSLRLLSLHGNDI 114
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 5e-09
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Query: 344 TTLDLSRNQLTGP---IPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNK 400
T + S L IP + + LYL NQ T +P L + L ++L+ N+
Sbjct: 13 TVVRCSNKGLKVLPKGIPRD------VTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNR 65
Query: 401 LSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVGLYLQHNKLSGPVDELFSN 459
+S SF N+ +L L LS+N L +P + L +L L L N +S + F++
Sbjct: 66 ISTLSNQSFSNMTQLLTLILSYNRL-RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFND 124
Query: 460 SAAWKIATMNMSNNLFD 476
+ ++ + + N
Sbjct: 125 LS--ALSHLAIGANPLY 139
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 7e-08
Identities = 37/172 (21%), Positives = 56/172 (32%), Gaps = 69/172 (40%)
Query: 213 VLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGP 272
L L+ N F ++P EL + LT +DL NN +S L + +++ QL L+LS+N L
Sbjct: 35 ELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRC- 92
Query: 273 IPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGK 332
IP FD
Sbjct: 93 IP--------------------PRTFD--------------------------------- 99
Query: 333 IPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK-LQGLYLGNNQLTGSIPW 383
L +L L L N ++ +P + + L L +G N P
Sbjct: 100 ------GLKSLRLLSLHGNDISV-VPEGAFNDLSALSHLAIGAN------PL 138
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 479 LPRSLGNLSYLTNLDLHENKFTGEIPPDL-GNLMQLEYLDVSRNRLCGQIPETMC-SLSN 536
+P+ L N +LT +DL N+ + + N+ QL L +S NRL IP L +
Sbjct: 46 VPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNRL-RCIPPRTFDGLKS 103
Query: 537 LLYLSLAENRLEGMVPRSGI---CQNLSKISLTGN 568
L LSL N + +VP G LS +++ N
Sbjct: 104 LRLLSLHGNDIS-VVPE-GAFNDLSALSHLAIGAN 136
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 19/92 (20%)
Query: 188 ERLVLTNNMLKGHLPKEIGNLSALSVLDLNSN--------LFDGIIPYELGDCISLTTLD 239
L L N +PKE+ N L+++DL++N F + L TL
Sbjct: 34 TELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNM--------TQLLTLI 84
Query: 240 LGNNNLSGLIPEKIAD-LAQLQCLVLSHNNLS 270
L N L + P + D L L+ L L N++S
Sbjct: 85 LSYNRLRCI-PPRTFDGLKSLRLLSLHGNDIS 115
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 5e-04
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 490 TNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRL 547
T L L N+FT +P +L N L +D+S NR+ ++ +++ LL L L+ NRL
Sbjct: 34 TELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 3e-11
Identities = 49/227 (21%), Positives = 86/227 (37%), Gaps = 52/227 (22%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK----------- 733
+G G F TV+ A + + VA+K + + E++ L +V
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMK-IVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 84
Query: 734 HQNLVPLLGYCSFDEEKL----LVYEYMVNGSLDLWLRNRTG--SLEVLGWDKRYKIACG 787
+++ LL + + +V+E + L L + L + +I+
Sbjct: 85 ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYV-----KQISKQ 139
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILLNEE------FEAKVADFGLARLISAC--ETHV 839
GL ++H IIH DIK N+L+ + K+AD G +AC + H
Sbjct: 140 LLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLG-----NACWYDEHY 192
Query: 840 STDIAGTFGYIPPE------YGQSGRSTTRGDVYSFGVILLELVTGK 880
+ I Y PE +G D++S ++ EL+TG
Sbjct: 193 TNSIQTRE-YRSPEVLLGAPWGCGA------DIWSTACLIFELITGD 232
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 7e-11
Identities = 53/229 (23%), Positives = 80/229 (34%), Gaps = 47/229 (20%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKL---SQAKTQGHREF-----TAEMETLGKVKHQNL 737
IG GGFG +Y A + A + Q E A+ + + K +
Sbjct: 45 IGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQ 104
Query: 738 VPLLG-----YCSFDEEKLLVYEYMV----NGSL-DLWLRNRTGSLE-VLGWDKRYKIAC 786
+ LG E K Y +MV L + +N T VL ++
Sbjct: 105 LDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVL------QLGI 158
Query: 787 GAARGLAFLH-HGFTPHIIHRDIKASNILLNEEFEAKV--ADFGLARLISACETHV---- 839
L ++H + + +H DIKA+N+LL + +V AD+GL+ H
Sbjct: 159 RMLDVLEYIHENEY----VHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQE 214
Query: 840 --STDIAGTFGYIP----PEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882
GT + S R R DV G +L + GK P
Sbjct: 215 NPRKGHNGTIEFTSLDAHKGVALS-R---RSDVEILGYCMLRWLCGKLP 259
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 9e-11
Identities = 35/163 (21%), Positives = 58/163 (35%), Gaps = 23/163 (14%)
Query: 319 VVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSI-------KLQGLY 371
V+L + K+ +LS L L LS N + I L+ L
Sbjct: 27 KVELHGMIPPIE-KMDATLSTLKACKHLALSTNNIE---------KISSLSGMENLRILS 76
Query: 372 LGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELD--GQL 429
LG N + I L +L ++ N+++ + L L L +S N++ G++
Sbjct: 77 LGRNLIK-KIENLDAVADTLEELWISYNQIA--SLSGIEKLVNLRVLYMSNNKITNWGEI 133
Query: 430 PSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSN 472
L+ + L L L N L E + S + N
Sbjct: 134 -DKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPN 175
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Query: 479 LPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLL 538
+ +L L +L L N +I L + L L + RN + +I L
Sbjct: 40 MDATLSTLKACKHLALSTNNIE-KISS-LSGMENLRILSLGRNLIK-KIENLDAVADTLE 96
Query: 539 YLSLAENRLEGMVPRSGI--CQNLSKISLTGNK 569
L ++ N++ + SGI NL + ++ NK
Sbjct: 97 ELWISYNQIASL---SGIEKLVNLRVLYMSNNK 126
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 7/104 (6%)
Query: 46 SLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGT 105
L I K+ + K ++LS N + I L E+L + L NL+
Sbjct: 29 ELHGMIPP-IEKMDATLSTLKACKHLALSTNNIE-KI-SSLSGMENLRILSLGRNLIK-K 84
Query: 106 IEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNN 148
IE + L +L I N I + + KL L VL + +N
Sbjct: 85 IENLDAVADTLEELWISYNQI--ASLSGIEKLVNLRVLYMSNNK 126
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 25/146 (17%), Positives = 56/146 (38%), Gaps = 25/146 (17%)
Query: 132 EYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLE-----GSLPYEVGNAAA 186
++ + L + ++ + + + N +E +
Sbjct: 20 VVATEAEKVELHGMIPPIEKM-DATLSTLKACKHLALSTNNIEKISSLSGMEN------- 71
Query: 187 LERLVLTNNMLKGHLPKEIGNLSALS----VLDLNSNLFDGIIPYELGDCISLTTLDLGN 242
L L L N++K +I NL A++ L ++ N + + ++L L + N
Sbjct: 72 LRILSLGRNLIK-----KIENLDAVADTLEELWISYNQIASLSG--IEKLVNLRVLYMSN 124
Query: 243 NNLSGLIP-EKIADLAQLQCLVLSHN 267
N ++ +K+A L +L+ L+L+ N
Sbjct: 125 NKITNWGEIDKLAALDKLEDLLLAGN 150
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 7e-04
Identities = 17/91 (18%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 481 RSLGNLSYLTNLDLH--ENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLL 538
R + ++LH ++ L L ++L +S N + +I ++ + NL
Sbjct: 17 RKSVVATEAEKVELHGMIPPIE-KMDATLSTLKACKHLALSTNNI-EKI-SSLSGMENLR 73
Query: 539 YLSLAENRLEGMVPRSGICQNLSKISLTGNK 569
LSL N ++ + + L ++ ++ N+
Sbjct: 74 ILSLGRNLIKKIENLDAVADTLEELWISYNQ 104
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 1e-10
Identities = 52/232 (22%), Positives = 85/232 (36%), Gaps = 50/232 (21%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHR-----------EFTAEMETLGKVKHQ 735
IG GGFG +Y A + ++V K + + A+ E + K
Sbjct: 43 IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102
Query: 736 NLVPLLG-----YCSFDEEKLLVYEYMVNGSL--DLW----LRNRTGSLE-VLGWDKRYK 783
+ LG ++ Y +M+ DL + S + VL +
Sbjct: 103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVL------Q 156
Query: 784 IACGAARGLAFLH-HGFTPHIIHRDIKASNILLNEEFEAKV--ADFGLARLISACETHV- 839
++ L ++H H + +H DIKASN+LLN + +V D+GLA H
Sbjct: 157 LSLRILDILEYIHEHEY----VHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKA 212
Query: 840 -----STDIAGTFGYIPPE----YGQSGRSTTRGDVYSFGVILLELVTGKEP 882
GT + + S R RGD+ G +++ +TG P
Sbjct: 213 YAADPKRCHDGTIEFTSIDAHNGVAPS-R---RGDLEILGYCMIQWLTGHLP 260
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 63.0 bits (152), Expect = 2e-10
Identities = 37/254 (14%), Positives = 68/254 (26%), Gaps = 67/254 (26%)
Query: 677 ATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGH--------REFTAEMET 728
T + IG+G FG V++ D VA+K ++ E E+
Sbjct: 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76
Query: 729 LGKV---------KHQNLVPLLG---------------YCSFDEEKL------------- 751
++ + + + L + ++ K
Sbjct: 77 SKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQ 136
Query: 752 --LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIK 809
+V E+ G +R + S I LA HRD+
Sbjct: 137 LFIVLEFEFGGIDLEQMRTKLSS-----LATAKSILHQLTASLAVAEASL--RFEHRDLH 189
Query: 810 ASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP--EYGQSGRSTTRGDVY 867
N+LL + K+ + + + G +Y S V+
Sbjct: 190 WGNVLLKKTSLKKLHYTLNGKSST----------IPSCGLQVSIIDYTLSRLERDGIVVF 239
Query: 868 SFGVILLELVTGKE 881
+ +L TG
Sbjct: 240 CDVSMDEDLFTGDG 253
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 2e-10
Identities = 62/212 (29%), Positives = 94/212 (44%), Gaps = 36/212 (16%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQ------NLV 738
+IG G FG V KA + VA+K + + + + HR+ E+ L ++ Q N++
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMV-RNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 739 PLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG 798
+L +F + +E + S++L+ + + K A + L LH
Sbjct: 163 HMLENFTFRNHICMTFELL---SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK- 218
Query: 799 FTPHIIHRDIKASNILLNEEFEA--KVADFGLARLISACETH--VSTDIAGTFGYIPPE- 853
IIH D+K NILL ++ + KV DFG S+C H V T I F Y PE
Sbjct: 219 --NRIIHCDLKPENILLKQQGRSGIKVIDFG-----SSCYEHQRVYTYIQSRF-YRAPEV 270
Query: 854 -----YGQSGRSTTRGDVYSFGVILLELVTGK 880
YG D++S G IL EL+TG
Sbjct: 271 ILGARYGMPI------DMWSLGCILAELLTGY 296
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 3e-10
Identities = 59/377 (15%), Positives = 110/377 (29%), Gaps = 108/377 (28%)
Query: 229 LGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPD 288
+T+LDL NNL +L Q ++ S
Sbjct: 18 TSIPHGVTSLDLSLNNLY---SISTVELIQ----AFANTPAS------------------ 52
Query: 289 LSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDL 348
+ +LS N L + +V +L N+T+L+L
Sbjct: 53 ---VTS---LNLSGNSLGFK------NSDELVQILAAIP-------------ANVTSLNL 87
Query: 349 SRNQLTGPIPSEFGDSIK-----LQGLYLGNNQLTGSIPWSLGSL-----GGLVKLNLTG 398
S N L+ E ++ + L LG N + + LNL G
Sbjct: 88 SGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRG 147
Query: 399 NKLSGKVPTSFGNL-----KELTHLDLSFNELDGQLPSSLSNIL-----NLVGLYLQHNK 448
N L K + + L+L N L + + L+ L ++ L L N
Sbjct: 148 NDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANL 207
Query: 449 LSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLG 508
L + ++A + S +++ +L+L N G +L
Sbjct: 208 LG--------LKSYAELAYIFSSIP-------------NHVVSLNLCLNCLHGPSLENLK 246
Query: 509 NLMQ----LEYLDVSRNRL-------CGQIPETMCSLSNLLYLSLAENRL--EGMVPRSG 555
L L+ + + + + C + ++ ++ + + +P S
Sbjct: 247 LLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPISN 306
Query: 556 ----ICQNLSKISLTGN 568
+ SL
Sbjct: 307 LIRELSGKADVPSLLNQ 323
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 1e-08
Identities = 56/347 (16%), Positives = 107/347 (30%), Gaps = 73/347 (21%)
Query: 183 NAAALERLVLTNNMLKGHLPKEIG-----NLSALSVLDLNSNLFDGIIPYELGDCI---- 233
A++ L L+ N L E+ + ++ L+L+ N EL +
Sbjct: 49 TPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIP 108
Query: 234 -SLTTLDLGNNNLSGLIPEKIADL-----AQLQCLVLSHNNLSGPIPSKPSSYFRQANMP 287
++T LDLG N+ S + A + L L N+L K S Q
Sbjct: 109 FTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG----IKSSDELIQILAA 164
Query: 288 DLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLD 347
+ + +L N L+ +C + L + ++T+LD
Sbjct: 165 IPANVNS---LNLRGNNLASK------NCAELAKFLASIP-------------ASVTSLD 202
Query: 348 LSRNQLTGPIPSEFGDSIK-----LQGLYLGNNQLTGS----IPWSLGSLGGLVKLNLTG 398
LS N L +E + L L N L G + SL L + L
Sbjct: 203 LSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDY 262
Query: 399 NKLSGKVP-------TSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSG 451
+ + +F N++++ +D + E+ +SN++ + L
Sbjct: 263 DIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPISNLIRELSGKADVPSLL- 321
Query: 452 PVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENK 498
++ + + +++ L
Sbjct: 322 --NQCLIFAQKHQTNIEDLNIP-------------DELRESIQTCKP 353
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 8e-08
Identities = 53/295 (17%), Positives = 96/295 (32%), Gaps = 49/295 (16%)
Query: 324 LNNNMLSGK----IPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK-----LQGLYLGN 374
+N + + S +T+LDLS N L E + + L L
Sbjct: 1 MNYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSG 60
Query: 375 NQLTGSIPWSLGSL-----GGLVKLNLTGNKLSGKVPTSFGNL-----KELTHLDLSFNE 424
N L L + + LNL+GN LS K +T LDL +N+
Sbjct: 61 NSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWND 120
Query: 425 LDGQLPSSLSNIL-----NLVGLYLQHNKLSGPVDELFSN---SAAWKIATMNMSNNLF- 475
+ S ++ L L+ N L + + + ++N+ N
Sbjct: 121 FSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA 180
Query: 476 DGG---LPRSLGNL-SYLTNLDLHENKFTGEIPPDLG-----NLMQLEYLDVSRNRL--- 523
L + L ++ + +T+LDL N + +L + L++ N L
Sbjct: 181 SKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGP 240
Query: 524 -CGQIPETMCSLSNLLYLSLAENRLEGMVPRSGI--------CQNLSKISLTGNK 569
+ SL +L + L + ++ M Q + + G +
Sbjct: 241 SLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKE 295
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 5e-04
Identities = 37/245 (15%), Positives = 80/245 (32%), Gaps = 37/245 (15%)
Query: 64 NCSMLKSISLSNNFLSGSIPRELC-----TSESLEEIDLDGNLLTGT-----IEGVFEKC 113
+ + S++LS NFLS EL ++ +DL N + +
Sbjct: 78 IPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLP 137
Query: 114 SNLSQLVIFRNHIYG----SIPEYLSKLP--LMVLDLDSNNFT-----GIIPVSIWNSET 162
++++ L + N + + + L+ +P + L+L NN + +
Sbjct: 138 ASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPAS 197
Query: 163 LMEFSAANNLLEGSLPYEVGNA-----AALERLVLTNNMLKG----HLPKEIGNLSALSV 213
+ + NLL E+ + L L N L G +L +L L
Sbjct: 198 VTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQT 257
Query: 214 LDLNSNLFDGIIPYE-------LGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSH 266
+ L+ ++ + + + + +D + I++L +
Sbjct: 258 VYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPISNLIRELSGKADV 317
Query: 267 NNLSG 271
+L
Sbjct: 318 PSLLN 322
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 8e-10
Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 27/130 (20%)
Query: 299 DLSYNRLSGPIPEEL-GSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPI 357
L+ N L + L G +V L L N L+G P + +++ L L N++ I
Sbjct: 35 LLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKE-I 93
Query: 358 PSEFGDSI-KLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELT 416
++ + +L+ L L +NQ++ + P SF +L LT
Sbjct: 94 SNKMFLGLHQLKTLNLYDNQIS-CVM-----------------------PGSFEHLNSLT 129
Query: 417 HLDLSFNELD 426
L+L+ N +
Sbjct: 130 SLNLASNPFN 139
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 30/174 (17%), Positives = 48/174 (27%), Gaps = 71/174 (40%)
Query: 213 VLDLNSNLFDGIIPYELGDCIS-LTTLDLGNNNLSGLIPEKIAD-LAQLQCLVLSHNNLS 270
L LN N I L + L L+L N L+G+ + + +Q L L N +
Sbjct: 33 ELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGI-EPNAFEGASHIQELQLGENKIK 91
Query: 271 GPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLS 330
I + +F
Sbjct: 92 E-IS--------------------NKMFL------------------------------- 99
Query: 331 GKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK-LQGLYLGNNQLTGSIPW 383
L L TL+L NQ++ + + + L L L +N P+
Sbjct: 100 --------GLHQLKTLNLYDNQISC-VMPGSFEHLNSLTSLNLASN------PF 138
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.4 bits (148), Expect = 1e-09
Identities = 92/629 (14%), Positives = 165/629 (26%), Gaps = 211/629 (33%)
Query: 420 LSFNELDG--QLPSSLSNILNLVGLYL--QHNKLSGPVDELFSNSAAW---KIATMNMSN 472
LS E+D ++S L L L Q + V+E+ + + I T
Sbjct: 46 LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQ- 104
Query: 473 NLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMC 532
S+ Y+ D N ++ +VSR + ++ + +
Sbjct: 105 --------PSMMTRMYIEQRDRLYN--DNQVFAKY---------NVSRLQPYLKLRQALL 145
Query: 533 SLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGK--IIGSNCQVKTFGKLAL 590
L + + +G+ G GK + C K+
Sbjct: 146 ELRPAKNVLI-----DGV---------------LG----SGKTWVALDVCLSY---KVQC 178
Query: 591 LHAFGLAGLVVGCVFIVLTTVIALRKQIKRRSRCSDPEEIEE--TKLNSFSDHNLYFLSS 648
F + L + C+ PE + E KL D N S
Sbjct: 179 KMDFKIFWLNLK--------------------NCNSPETVLEMLQKLLYQIDPNWTSRSD 218
Query: 649 SRSKEPLSINIA-------MFEQPLMRLTLV-------HILEATNNFCKT-------NII 687
S L I+ + +P LV A N CK +
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVT 278
Query: 688 GDGGFGTVYKAAL---PDGKT-------------VAVKKLSQAKTQGH-----------R 720
T +L T + L + + R
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIR 338
Query: 721 EFTAEMETLGKVKHQNLVPLLGYC----SFDE-----EKLLVYEYMVNGSLD----LW-- 765
+ A + V L ++ E ++L V+ + +W
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFD 398
Query: 766 ------------LRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNI 813
L SL V K I + I+ ++K
Sbjct: 399 VIKSDVMVVVNKLHKY--SL-VEKQPKESTI---------SIPS------IYLELKVK-- 438
Query: 814 LLNEEFEAKVADFGL-ARLISACETHVSTDIAGTFGY-IPPEYGQSGRSTTRGDVYSFGV 871
L E+ L ++ Y IP + D Y +
Sbjct: 439 -LENEYA-------LHRSIVDH--------------YNIPKTFDSDDLIPPYLDQYFYSH 476
Query: 872 I---LLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKM 928
I L + + T F+ + + ++ QK++ A ++L L+
Sbjct: 477 IGHHLKNIEHPERMT--LFRMVF-LDF-RFLEQKIRHDSTAWNASGSILN------TLQQ 526
Query: 929 LRIAGDCLSDNPAMRPTMLH-VLKFLKEI 956
L+ + DN +++ +L FL +I
Sbjct: 527 LKFYKPYICDNDPKYERLVNAILDFLPKI 555
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.2 bits (137), Expect = 2e-08
Identities = 72/448 (16%), Positives = 130/448 (29%), Gaps = 110/448 (24%)
Query: 37 WL--GNWNQMESLLLSSNQFIGKI-PPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLE 93
WL N N E++L + + +I P +I L + + + R L S+ E
Sbjct: 186 WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL-RRLLKSKPYE 244
Query: 94 E--IDLDGNLLTGTIEGVFE-KCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNN-- 148
+ L N+ F C L+ R + ++LS + LD ++
Sbjct: 245 NCLLVLL-NVQNAKAWNAFNLSCK---ILLTTRFK---QVTDFLSAATTTHISLDHHSMT 297
Query: 149 FTGIIPVSIWNSETLMEFSAANNLLEGSLPYEV--GN-------AAALERLVLTNNMLKG 199
T E + LP EV N A ++ + T + K
Sbjct: 298 LT--------PDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH 349
Query: 200 HLPKEIGNLSALSVLDLNSN----LFD--GIIPYELGDCISLTTLDLGNNNLSGLIPEKI 253
++ + S+ L +FD + P I L L ++ +
Sbjct: 350 VNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH--IPTILLSLIWFDVIKSDVMVV 407
Query: 254 ADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEEL 313
+ LV K S+ +P + Y L + E
Sbjct: 408 VNKLHKYSLVEKQP--------KESTIS----IPSI------------YLELKVKLENEY 443
Query: 314 GSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLY-L 372
L+ +++ + + DL L S G + L
Sbjct: 444 A---------LHRSIVD-----HYNIPKTFDSDDLIPPYLDQYFYSHIG--------HHL 481
Query: 373 GNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSS 432
N + + +L +V L+ L K + H ++N S
Sbjct: 482 KNIEHPERM-----TLFRMVFLDF--RFLEQK----------IRHDSTAWNA-----SGS 519
Query: 433 LSNILNLVGLYLQHNKLSGPVDELFSNS 460
+ N L + Y + + P E N+
Sbjct: 520 ILNTLQQLKFYKPYICDNDPKYERLVNA 547
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 5e-07
Identities = 109/745 (14%), Positives = 207/745 (27%), Gaps = 249/745 (33%)
Query: 194 NNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLI---P 250
++L + N V D+ ++ E+ I G L +
Sbjct: 19 KDILSVFEDAFVDNFDCKDVQDMPKSILSK---EEIDHIIMSKDAVSGTLRLFWTLLSKQ 75
Query: 251 EKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYN------R 304
E++ + L +++ L PI ++ RQ +M +I+ D YN +
Sbjct: 76 EEMVQKFVEEVLRINYKFLMSPIKTEQ----RQPSMMTRMYIEQR---DRLYNDNQVFAK 128
Query: 305 LSGPIPE---ELGSCV--------VVVDLLLNNNML-SGKIPGSLSRLTNLTTLDLSRNQ 352
+ + +L + V++D +L SGK + + L
Sbjct: 129 YNVSRLQPYLKLRQALLELRPAKNVLID-----GVLGSGK-----TWVALDVCLSY---- 174
Query: 353 LTGPIPSEFGDSIKLQGLY---LGNNQLTGSIPWSLGSLGGLVKLNLT-GNKLSGKVPTS 408
+ + I + L N ++ L L + N T + S +
Sbjct: 175 ---KVQCKMDFKI-----FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLR 226
Query: 409 FGNLK-ELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIAT 467
+++ EL L + L LV + + N+ AW
Sbjct: 227 IHSIQAELRRL-----LKSKPYENCL-----LV------------LLNV-QNAKAWN--- 260
Query: 468 MNMSNNLFDGG-----LPRSLGNLSYLTN-------LDLHENKFTGEIPPDLGNLMQLEY 515
F+ R +L+ LD H T P ++ +L+ L+Y
Sbjct: 261 ------AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT---PDEVKSLL-LKY 310
Query: 516 LDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKI 575
LD L P + + + LS+ + + N + N D I
Sbjct: 311 LDCRPQDL----PREVLTTNPRR-LSIIAESIRDGLATW---DNWKHV----NCDKLTTI 358
Query: 576 IGSNCQV-------KTFGKLALLHAFGLAGLVVGCVF-----IVLTTVIALRKQIKRRSR 623
I S+ V K F +L+ VF I + + + +
Sbjct: 359 IESSLNVLEPAEYRKMFDRLS--------------VFPPSAHIPTILLSLIWFDVIKS-- 402
Query: 624 CSDPEEIEET-----------KLNSFSDHNLYFLSSSRSKEPLSINIAMFEQPLMRLTLV 672
D + K ++ S ++Y + L +
Sbjct: 403 --DVMVVVNKLHKYSLVEKQPKESTISIPSIYLE---------------LKVKLENEYAL 445
Query: 673 H--ILEATN---NFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEME 727
H I++ N F ++I Y GH E
Sbjct: 446 HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI------------------GHHLKNIEHP 487
Query: 728 TLGKVKHQNLVPLLGYCSFD--EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIA 785
+ L ++ + F E+K+ N S + L L K YK
Sbjct: 488 -----ERMTLFRMV-FLDFRFLEQKIRHDSTAWNASGSI--------LNTLQQLKFYK-- 531
Query: 786 CGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV----ST 841
P+I D ++E V + + E ++ T
Sbjct: 532 ---------------PYICDND---------PKYERLVNA--ILDFLPKIEENLICSKYT 565
Query: 842 DIAGTFGYIPPE---YGQSGRSTTR 863
D+ + + + ++ + R
Sbjct: 566 DLL-RIALMAEDEAIFEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.9 bits (113), Expect = 2e-05
Identities = 93/673 (13%), Positives = 181/673 (26%), Gaps = 232/673 (34%)
Query: 82 IPRELCTSESLEEIDLDGNLLTGTIEGVFEK-CSNLSQLV-IFRNHIYGSIPEYLSKLPL 139
+P+ + + E ++ I + + ++GT+ +F S ++V F
Sbjct: 41 MPKSILSKEEIDHIIMSKDAVSGTLR-LFWTLLSKQEEMVQKF----------------- 82
Query: 140 MVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNML-K 198
V ++ N+ + LM + S+ + +RL N + K
Sbjct: 83 -VEEVLRINYK-------F----LMS-PIKTEQRQPSMMTRMYI-EQRDRLYNDNQVFAK 128
Query: 199 GHLP--KEIGNL-SALSVLDLNSNLFDGIIPYELGDC--ISLTT---------------- 237
++ + L AL L+L ++ + +
Sbjct: 129 YNVSRLQPYLKLRQAL--LELRPA--KNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI 184
Query: 238 --LDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGP-IPSKPSSYFRQANMPDLSFIQH 294
L+L N N + E + L + N S S ++
Sbjct: 185 FWLNLKNCNSPETVLEMLQKL----LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 295 HGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSG-----KIPGSLSRLTNLTTLDLS 349
Y C++V+ + N + KI L LTT
Sbjct: 241 K-----PYEN-----------CLLVLLNVQNAKAWNAFNLSCKI---L-----LTTRFKQ 276
Query: 350 -RNQLTGPIPSEF-----------GDSIKLQGLYLGNN------QLTGSIPWSLGSLGGL 391
+ L+ + + L YL ++ + P L +
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAES 336
Query: 392 VK---------LNLTGNKLSGKVPTSFGNLK--ELTHL--DLS-FNELDGQLPSSLSNIL 437
++ ++ +KL+ + +S L+ E + LS F +P+ L +++
Sbjct: 337 IRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP-SAHIPTILLSLI 395
Query: 438 NLVGLYLQHNKLSGPVDELFSNSAAW----KIATMNMSNNLFDGGLPRSLGNLSYLTNLD 493
W K M + N L SL ++
Sbjct: 396 -------------------------WFDVIKSDVMVVVNKLHK----YSL--------VE 418
Query: 494 LHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLL---YLSLAENRLEGM 550
+ T I P + YL++ E +L + Y + +
Sbjct: 419 KQPKESTISI-PSI-------YLELKVKL------ENEYALHRSIVDHYNIPKTFDSDDL 464
Query: 551 VPRSG---ICQ----NLSKISLTGNKDLCGKIIGSNCQVKTFGKLAL--------LHAFG 595
+P +L I L F + L +
Sbjct: 465 IPPYLDQYFYSHIGHHLKNIEHPERMTL-------------FRMVFLDFRFLEQKIRHDS 511
Query: 596 LAGLVVGCVFIVLTTVIALRKQIKRRSRCSDPEEIEETKLNSFSD------HNLYFLSSS 649
A G + L + + I D + E +N+ D NL
Sbjct: 512 TAWNASGSILNTLQQLKFYKPYI------CDNDPKYERLVNAILDFLPKIEENLI----- 560
Query: 650 RSKEPLSINIAMF 662
SK + IA+
Sbjct: 561 CSKYTDLLRIALM 573
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 3e-09
Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 341 TNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLG---SLGGLVKLNLT 397
T L L NQ+T P F +L L L NNQLT +P G L L +L+L
Sbjct: 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLP--AGVFDKLTQLTQLSLN 86
Query: 398 GNKLSGKVPT-SFGNLKELTHLDLSFN 423
N+L +P +F NLK LTH+ L N
Sbjct: 87 DNQLKS-IPRGAFDNLKSLTHIWLLNN 112
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 3e-09
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 341 TNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLG---SLGGLVKLNLT 397
T+ L L+ NQ+T P F + LQ LY +N+LT +IP G L L +L+L
Sbjct: 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIP--TGVFDKLTQLTQLDLN 89
Query: 398 GNKLSGKVPT-SFGNLKELTHLDLSFN 423
N L +P +F NLK LTH+ L N
Sbjct: 90 DNHLKS-IPRGAFDNLKSLTHIYLYNN 115
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 37/151 (24%), Positives = 47/151 (31%), Gaps = 68/151 (45%)
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293
L L NN ++ L P L LQ L + N L+ + P
Sbjct: 34 DKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT----AIP---------------- 73
Query: 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQL 353
GVFD +LT LT LDL+ N L
Sbjct: 74 -TGVFD---------------------------------------KLTQLTQLDLNDNHL 93
Query: 354 TGPIPSEFGDSIK-LQGLYLGNNQLTGSIPW 383
IP D++K L +YL NN PW
Sbjct: 94 KS-IPRGAFDNLKSLTHIYLYNN------PW 117
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 3e-09
Identities = 60/219 (27%), Positives = 89/219 (40%), Gaps = 44/219 (20%)
Query: 684 TNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQ------N 736
++IG G FG V KA + + VA+K + + K + E+ L +
Sbjct: 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKII-KNKKAFLNQAQIEVRLLELMNKHDTEMKYY 117
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLW----LRNRTG-SLEVLGWDKRYKIACGAARG 791
+V L + F LV+E + S +L+ N G SL + K A
Sbjct: 118 IVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSLNLT-----RKFAQQMCTA 169
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEA--KVADFGLARLISACETH--VSTDIAGTF 847
L FL IIH D+K NILL + K+ DFG S+C+ + I F
Sbjct: 170 LLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFG-----SSCQLGQRIYQYIQSRF 223
Query: 848 GYIPPE------YGQSGRSTTRGDVYSFGVILLELVTGK 880
Y PE Y + D++S G IL+E+ TG+
Sbjct: 224 -YRSPEVLLGMPYDLA------IDMWSLGCILVEMHTGE 255
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 5e-09
Identities = 51/241 (21%), Positives = 85/241 (35%), Gaps = 68/241 (28%)
Query: 687 IGDGGFGTVYKA---------ALPDGKTVAVKKLSQAKTQGHREF-----TAEMETLGKV 732
G +Y+A + P + ++K L + E A+ + K
Sbjct: 50 QTRDNQGILYEAAPTSTLTCDSGPQKQKFSLK-LDAKDGRLFNEQNFFQRAAKPLQVNKW 108
Query: 733 KHQNLVPLLG-----YCSFDEEKLLVYEYMVNGSL--DLW-LRNRTG----SLE-VLGWD 779
K PLL ++K Y ++V SL L + + S VL
Sbjct: 109 KKLYSTPLLAIPTCMGFGVHQDK---YRFLVLPSLGRSLQSALDVSPKHVLSERSVL--- 162
Query: 780 KRYKIACGAARGLAFLH-HGFTPHIIHRDIKASNILLNEEFEAKV--ADFGLARLISACE 836
++AC L FLH + + +H ++ A NI ++ E +++V A +G A
Sbjct: 163 ---QVACRLLDALEFLHENEY----VHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSG 215
Query: 837 THV------STDIAGTFGYIPPEY---------GQSGRSTTRGDVYSFGVILLELVTGKE 881
HV + G E+ G S R R D+ S G +L+ + G
Sbjct: 216 KHVAYVEGSRSPHEGD-----LEFISMDLHKGCGPS-R---RSDLQSLGYCMLKWLYGFL 266
Query: 882 P 882
P
Sbjct: 267 P 267
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 1e-08
Identities = 54/224 (24%), Positives = 85/224 (37%), Gaps = 54/224 (24%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVK--KLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGY 743
IG G FG +Y + G+ VA+K + Q H E + + +P + +
Sbjct: 17 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKI-YKMMQGGVG---IPTIRW 72
Query: 744 CSFDEEKLLVYEYMV----NGSL-DLW-LRNRTGSLE-VLGWDKRYKIACGAARGLAFLH 796
C + + Y MV SL DL+ +R SL+ VL +A + ++H
Sbjct: 73 CGAEGD----YNVMVMELLGPSLEDLFNFCSRKFSLKTVL------LLADQMISRIEYIH 122
Query: 797 HGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE 853
+ IHRD+K N L+ + + DFGLA+ TH +IP
Sbjct: 123 S---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ---------HIPYR 170
Query: 854 YGQSGRSTTR--------G-------DVYSFGVILLELVTGKEP 882
++ T R G D+ S G +L+ G P
Sbjct: 171 ENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLP 214
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 1e-08
Identities = 30/117 (25%), Positives = 45/117 (38%), Gaps = 6/117 (5%)
Query: 307 GPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK 366
G + + L N L+ I L +L L L+LS N+++G +
Sbjct: 32 GKLEGLTDEFEELEFLSTINVGLT-SIAN-LPKLNKLKKLELSDNRVSGGLEVLAEKCPN 89
Query: 367 LQGLYLGNNQLTG-SIPWSLGSLGGLVKLNLTGN---KLSGKVPTSFGNLKELTHLD 419
L L L N++ S L L L L+L L+ F L +LT+LD
Sbjct: 90 LTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLD 146
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 1e-06
Identities = 35/158 (22%), Positives = 51/158 (32%), Gaps = 35/158 (22%)
Query: 366 KLQGLYLGNNQLT-GSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNE 424
++ L L N++ G + L L+ L+ + + L +L L+LS N
Sbjct: 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-SI-ANLPKLNKLKKLELSDNR 75
Query: 425 LDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLG 484
+ G L NL L L NK+ + L
Sbjct: 76 VSGGLEVLAEKCPNLTHLNLSGNKIKDL-STI------------------------EPLK 110
Query: 485 NLSYLTNLDLHENKFTGEIPPD-----LGNLMQLEYLD 517
L L +LDL + T D L QL YLD
Sbjct: 111 KLENLKSLDLFNCEVTNL--NDYRENVFKLLPQLTYLD 146
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Query: 42 NQMESLLLSSNQF-IGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGN 100
+ ++ L+L +++ GK+ L+ +S N L+ SI L L++++L N
Sbjct: 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-SIA-NLPKLNKLKKLELSDN 74
Query: 101 LLTGTIEGVFEKCSNLSQLVIFRNHIYG-SIPEYLSKLP-LMVLDLDSN 147
++G +E + EKC NL+ L + N I S E L KL L LDL +
Sbjct: 75 RVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 187 LERLVLTNNMLKGHLPKEIGNLS---ALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNN 243
LE L N L I NL L L+L+ N G + C +LT L+L N
Sbjct: 44 LEFLSTINVGLT-----SIANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGN 98
Query: 244 NLSGL-IPEKIADLAQLQCLVLSHN 267
+ L E + L L+ L L +
Sbjct: 99 KIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 2e-06
Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 234 SLTTLDL-GNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFI 292
+ L L + + G + + +L+ L + L+ ++ +L +
Sbjct: 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT--------------SIANLPKL 63
Query: 293 QHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSG-KIPGSLSRLTNLTTLDLSRN 351
+LS NR+SG + C + L L+ N + L +L NL +LDL
Sbjct: 64 NKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
Query: 352 QLT 354
++T
Sbjct: 124 EVT 126
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 21/89 (23%), Positives = 31/89 (34%), Gaps = 3/89 (3%)
Query: 183 NAAALERLVLTNNMLK-GHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLG 241
+ ++ LVL N+ G L L L + I L L L+L
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIAN--LPKLNKLKKLELS 72
Query: 242 NNNLSGLIPEKIADLAQLQCLVLSHNNLS 270
+N +SG + L L LS N +
Sbjct: 73 DNRVSGGLEVLAEKCPNLTHLNLSGNKIK 101
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 3e-04
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 483 LGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSL 542
L L T I +L L +L+ L++S NR+ G + NL +L+L
Sbjct: 38 TDEFEELEFLSTINVGLT-SIA-NLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95
Query: 543 AENRLEGM--VPRSGICQNLSKISLTGN 568
+ N+++ + + +NL + L
Sbjct: 96 SGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 4e-04
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 485 NLSYLTNLDLHENKFT-GEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLA 543
S + L L ++ G++ +LE+L L I + L+ L L L+
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGL-TSI-ANLPKLNKLKKLELS 72
Query: 544 ENRLEGMVPR-SGICQNLSKISLTGNK 569
+NR+ G + + C NL+ ++L+GNK
Sbjct: 73 DNRVSGGLEVLAEKCPNLTHLNLSGNK 99
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 2e-08
Identities = 44/225 (19%), Positives = 77/225 (34%), Gaps = 54/225 (24%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS 745
IG+G FG +++ L + + VA+K + + + E T + +P + Y
Sbjct: 18 IGEGSFGVIFEGTNLLNNQQVAIKF--EPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFG 75
Query: 746 FDEEKLLVYEYMV----NGSL-DLW-LRNRTGSLE-VLGWDKRYKIACGAARGLAFLH-H 797
+ + +V SL DL L R S++ V A + +H
Sbjct: 76 QEGL----HNVLVIDLLGPSLEDLLDLCGRKFSVKTVA------MAAKQMLARVQSIHEK 125
Query: 798 GFTPHIIHRDIKASNILLNEEFEAK-----VADFGLARLISACETHVSTDIAGTFGYIPP 852
++RDIK N L+ V DFG+ + T +IP
Sbjct: 126 SL----VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQ---------HIPY 172
Query: 853 EYGQSGRSTTR--------G-------DVYSFGVILLELVTGKEP 882
++ T R G D+ + G + + + G P
Sbjct: 173 REKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLP 217
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 3e-08
Identities = 55/232 (23%), Positives = 88/232 (37%), Gaps = 52/232 (22%)
Query: 679 NNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNL 737
NF IG G FG + L + VA+K L K++ + E ++ +
Sbjct: 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPMKSR-APQLHLEYRFYKQLGSGDG 66
Query: 738 VPLLGYCSFDEEKLLVYEYMV----NGSL-DLW-LRNRTGSLE-VLGWDKRYKIACGAAR 790
+P + Y + Y MV SL DL+ L +RT SL+ VL IA
Sbjct: 67 IPQVYYFGPCGK----YNAMVLELLGPSLEDLFDLCDRTFSLKTVL------MIAIQLIS 116
Query: 791 GLAFLHHGFTPHIIHRDIKASNILLNEEFEAK-----VADFGLARLISACETHVSTDIAG 845
+ ++H + ++I+RD+K N L+ + DF LA+ ET
Sbjct: 117 RMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKK------ 167
Query: 846 TFGYIPPEYGQSGRSTTR--------G-------DVYSFGVILLELVTGKEP 882
+IP +S T R G D+ + G + + + G P
Sbjct: 168 ---HIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP 216
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 56.6 bits (136), Expect = 3e-08
Identities = 53/224 (23%), Positives = 82/224 (36%), Gaps = 54/224 (24%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVK--KLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGY 743
IG G FG +Y + + VA+K + Q E L +P + +
Sbjct: 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKI-YRILQGGTG---IPNVRW 70
Query: 744 CSFDEEKLLVYEYMV----NGSL-DLW-LRNRTGSLE-VLGWDKRYKIACGAARGLAFLH 796
+ + Y +V SL DL+ +R SL+ VL +A + F+H
Sbjct: 71 FGVEGD----YNVLVMDLLGPSLEDLFNFCSRKLSLKTVL------MLADQMINRVEFVH 120
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAK---VADFGLARLISACETHVSTDIAGTFGYIPPE 853
+ +HRDIK N L+ A + DFGLA+ TH +IP
Sbjct: 121 ---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQ---------HIPYR 168
Query: 854 YGQSGRSTTR--------G-------DVYSFGVILLELVTGKEP 882
++ T R G D+ S G +L+ + G P
Sbjct: 169 ENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 212
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 7e-08
Identities = 35/127 (27%), Positives = 49/127 (38%), Gaps = 7/127 (5%)
Query: 297 VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGP 356
V D + G I V + L L N L + L +L L L+LS N++ G
Sbjct: 30 VLDNCKSND-GKIEGLTAEFVNLEFLSLINVGLI-SVSN-LPKLPKLKKLELSENRIFGG 86
Query: 357 IPSEFGDSIKLQGLYLGNNQLTG-SIPWSLGSLGGLVKLNLTGN---KLSGKVPTSFGNL 412
+ L L L N+L S L L L L+L L+ + F L
Sbjct: 87 LDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLL 146
Query: 413 KELTHLD 419
+LT+LD
Sbjct: 147 PQLTYLD 153
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 2e-06
Identities = 40/158 (25%), Positives = 53/158 (33%), Gaps = 35/158 (22%)
Query: 366 KLQGLYLGNNQLT-GSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNE 424
++ L L N + G I L L+L L V ++ L +L L+LS N
Sbjct: 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-SV-SNLPKLPKLKKLELSENR 82
Query: 425 LDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLG 484
+ G L + NL L L NKL + L L
Sbjct: 83 IFGGLDMLAEKLPNLTHLNLSGNKLKD-ISTL------------------------EPLK 117
Query: 485 NLSYLTNLDLHENKFTGEIPPD-----LGNLMQLEYLD 517
L L +LDL + T D L QL YLD
Sbjct: 118 KLECLKSLDLFNCEVTNL--NDYRESVFKLLPQLTYLD 153
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 5e-06
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 187 LERLVLTNNMLKGHLPKEIGNLS---ALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNN 243
LE L L N L + NL L L+L+ N G + +LT L+L N
Sbjct: 51 LEFLSLINVGLI-----SVSNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGN 105
Query: 244 NLSGL-IPEKIADLAQLQCLVLSHN 267
L + E + L L+ L L +
Sbjct: 106 KLKDISTLEPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 7e-06
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 42 NQMESLLLSSNQF-IGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGN 100
+ L+L + + GKI L+ +SL N L S+ L L++++L N
Sbjct: 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-SVSN-LPKLPKLKKLELSEN 81
Query: 101 LLTGTIEGVFEKCSNLSQLVIFRNHIYG-SIPEYLSKLP-LMVLDLDSN 147
+ G ++ + EK NL+ L + N + S E L KL L LDL +
Sbjct: 82 RIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 3e-05
Identities = 23/89 (25%), Positives = 30/89 (33%), Gaps = 3/89 (3%)
Query: 183 NAAALERLVLTNNMLK-GHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLG 241
AA+ LVL N G + L L L + + L L L+L
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISVSN--LPKLPKLKKLELS 79
Query: 242 NNNLSGLIPEKIADLAQLQCLVLSHNNLS 270
N + G + L L L LS N L
Sbjct: 80 ENRIFGGLDMLAEKLPNLTHLNLSGNKLK 108
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 32/141 (22%), Positives = 47/141 (33%), Gaps = 32/141 (22%)
Query: 387 SLGGLVKLNLTGNKLS-GKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQ 445
+ + +L L K + GK+ L L L L S+SN+ L L
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGL-----ISVSNLPKLPKLK-- 74
Query: 446 HNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFT--GEI 503
+ +S N GGL L LT+L+L NK +
Sbjct: 75 ---------------------KLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTL 113
Query: 504 PPDLGNLMQLEYLDVSRNRLC 524
P L L L+ LD+ +
Sbjct: 114 EP-LKKLECLKSLDLFNCEVT 133
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 7e-04
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 483 LGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSL 542
L L L + +L L +L+ L++S NR+ G + L NL +L+L
Sbjct: 45 TAEFVNLEFLSLINVGLI-SVS-NLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102
Query: 543 AENRLEGM--VPRSGICQNLSKISLTGN 568
+ N+L+ + + + L + L
Sbjct: 103 SGNKLKDISTLEPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 7e-04
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 11/108 (10%)
Query: 43 QMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLL 102
+E L L + + + + LK + LS N + G + +L ++L GN L
Sbjct: 50 NLEFLSLINVG-LISVSN-LPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKL 107
Query: 103 T--GTIEGVFEKCSNLSQLVIFRNHIYGSIPEY----LSKLP-LMVLD 143
T+E +K L L +F + ++ +Y LP L LD
Sbjct: 108 KDISTLE-PLKKLECLKSLDLFNCEVT-NLNDYRESVFKLLPQLTYLD 153
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 6e-07
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 9/126 (7%)
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLL-LNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPI 357
DL ++ P+ E LG+ + D + ++N + K+ G L L TL ++ N++
Sbjct: 25 DLRGYKI--PVIENLGATLDQFDAIDFSDNEIR-KLDG-FPLLRRLKTLLVNNNRICRIG 80
Query: 358 PSEFGDSIKLQGLYLGNNQLTG-SIPWSLGSLGGLVKLNLTGNKLSGKV---PTSFGNLK 413
L L L NN L L SL L L + N ++ K +
Sbjct: 81 EGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVP 140
Query: 414 ELTHLD 419
++ LD
Sbjct: 141 QVRVLD 146
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 3e-06
Identities = 27/164 (16%), Positives = 58/164 (35%), Gaps = 35/164 (21%)
Query: 359 SEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHL 418
+++ ++++ + L L ++ I +L ++ + N++ K+ F L+ L L
Sbjct: 13 AQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLDG-FPLLRRLKTL 69
Query: 419 DLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGG 478
++ N + + +L L L +N L +L
Sbjct: 70 LVNNNRICRIGEGLDQALPDLTELILTNNSLVEL-GDL---------------------- 106
Query: 479 LPRSLGNLSYLTNLDLHENKFTGEIPPD-----LGNLMQLEYLD 517
L +L LT L + N T + + + Q+ LD
Sbjct: 107 --DPLASLKSLTYLCILRNPVTNK--KHYRLYVIYKVPQVRVLD 146
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 3e-06
Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 9/85 (10%)
Query: 187 LERLVLTNNMLKGHLPKEIGNLS---ALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNN 243
+ + ++N ++ ++ L L +N+N I LT L L NN
Sbjct: 44 FDAIDFSDNEIR-----KLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNN 98
Query: 244 NLSGL-IPEKIADLAQLQCLVLSHN 267
+L L + +A L L L + N
Sbjct: 99 SLVELGDLDPLASLKSLTYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 6e-05
Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 7/109 (6%)
Query: 45 ESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTG 104
L L + I I +I S+N + + L+ + ++ N +
Sbjct: 22 RELDLRGYK-IPVIENLGATLDQFDAIDFSDNEIR-KL-DGFPLLRRLKTLLVNNNRICR 78
Query: 105 TIEGVFEKCSNLSQLVIFRNHI--YGSIPEYLSKLP-LMVLDLDSNNFT 150
EG+ + +L++L++ N + G + + L+ L L L + N T
Sbjct: 79 IGEGLDQALPDLTELILTNNSLVELGDL-DPLASLKSLTYLCILRNPVT 126
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 7e-05
Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 5/99 (5%)
Query: 51 SNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVF 110
+ + I + + N + + L + I T + + ID N + ++G F
Sbjct: 5 TAELIEQAA-QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLDG-F 60
Query: 111 EKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNN 148
L L++ N I LP L L L +N+
Sbjct: 61 PLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNS 99
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 7e-05
Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 13/105 (12%)
Query: 170 NNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSA----LSVLDLNSNLFDGII 225
L+E + Y NA L L + I NL A +D + N +
Sbjct: 6 AELIEQAAQYT--NAVRDRELDLRGYKIP-----VIENLGATLDQFDAIDFSDNEIRKLD 58
Query: 226 PYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270
L TL + NN + + L L L+L++N+L
Sbjct: 59 G--FPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV 101
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 9e-05
Identities = 28/132 (21%), Positives = 44/132 (33%), Gaps = 10/132 (7%)
Query: 90 ESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNN 148
E+DL G + IE + + N I + + L L L +++N
Sbjct: 19 VRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEI-RKL-DGFPLLRRLKTLLVNNNR 75
Query: 149 FTGIIPVSIWNSETLMEFSAANNLLE--GSLPYEVGNAAALERLVLTNN---MLKGHLPK 203
I L E NN L G L + + +L L + N K +
Sbjct: 76 ICRIGEGLDQALPDLTELILTNNSLVELGDLDP-LASLKSLTYLCILRNPVTNKKHYRLY 134
Query: 204 EIGNLSALSVLD 215
I + + VLD
Sbjct: 135 VIYKVPQVRVLD 146
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 482 SLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLS 541
N LDL K I L Q + +D S N + + + L L L
Sbjct: 14 QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEI--RKLDGFPLLRRLKTLL 70
Query: 542 LAENRLEGMVPR-SGICQNLSKISLTGNK 569
+ NR+ + +L+++ LT N
Sbjct: 71 VNNNRICRIGEGLDQALPDLTELILTNNS 99
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 26/153 (16%), Positives = 53/153 (34%), Gaps = 33/153 (21%)
Query: 418 LDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDG 477
+ L+ + + + +N + L L+ K+ I NL
Sbjct: 2 VKLTAELI--EQAAQYTNAVRDRELDLRGYKIP-------------VI------ENLGA- 39
Query: 478 GLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNL 537
L +D +N+ ++ L +L+ L V+ NR+C +L +L
Sbjct: 40 -------TLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90
Query: 538 LYLSLAENRLEGM--VPRSGICQNLSKISLTGN 568
L L N L + + ++L+ + + N
Sbjct: 91 TELILTNNSLVELGDLDPLASLKSLTYLCILRN 123
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 2e-06
Identities = 52/246 (21%), Positives = 82/246 (33%), Gaps = 82/246 (33%)
Query: 686 IIGDGGFGTVYKAA-LPDGKTVAVKKL-------SQAKTQGHREFTAEMETLGKVKHQ-- 735
+GDG FG V + + K AVK + AK E + L K+++
Sbjct: 42 KMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKI--------EADILKKIQNDDI 93
Query: 736 ---NLVPLLGYCSFDEEKLLVYEYMVNGSLDL--WLR--NRTG-SLEVLGWDKRYKIACG 787
N+V G + + L++E + L + N G +E +
Sbjct: 94 NNNNIVKYHGKFMYYDHMCLIFEPL---GPSLYEIITRNNYNGFHIEDI-----KLYCIE 145
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILLNEEFEA-------------------------K 822
+ L +L + H D+K NILL++ + K
Sbjct: 146 ILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIK 202
Query: 823 VADFGLARLISACETH--VSTDIAGTFGYIPPE------YGQSGRSTTRGDVYSFGVILL 874
+ DFG A + I Y PE + S D++SFG +L
Sbjct: 203 LIDFG-----CATFKSDYHGSIINTRQ-YRAPEVILNLGWDVSS------DMWSFGCVLA 250
Query: 875 ELVTGK 880
EL TG
Sbjct: 251 ELYTGS 256
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 4e-06
Identities = 46/393 (11%), Positives = 108/393 (27%), Gaps = 60/393 (15%)
Query: 207 NLSALSVLDLNSNLFDGIIPYELGD----CISLTTLDLGNNNLSGLIPEKIADLAQLQCL 262
+ + L + + F L + SL L+ + + P+ + +A+ C
Sbjct: 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR-NCR 220
Query: 263 VLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDL 322
L + + +F+ A ++ L+ + L + L
Sbjct: 221 SLVSVKVGDFEILELVGFFKAAAN-----LEEFCGGSLNEDIGMPEKYMNLVFPRKLCRL 275
Query: 323 LLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGP-IPSEFGDSIKLQGLYLGNNQLTGSI 381
L+ + +P + LDL L + L+ L N +
Sbjct: 276 GLSYMGPNE-MPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGL 334
Query: 382 PWSLGSLGGLVKLNLTGNKLSGKVPTSFG------------NLKELTHLDLSFNELDGQ- 428
L +L + + G +EL ++ + +++ +
Sbjct: 335 EVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNES 394
Query: 429 ---LPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGN 485
+ + L N+ + + L +++ D G+ L
Sbjct: 395 LESIGTYLKNLCDFRLVLLDRE--------------------ERITDLPLDNGVRSLLIG 434
Query: 486 LSYLTNLDLHEN--KFTGEIPPDLGNLM-QLEYLDVSRNRLCGQIPETMCSLS----NLL 538
L + T +G + ++ + G+ E + S NL
Sbjct: 435 CKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGY---VGESDEGLMEFSRGCPNLQ 491
Query: 539 YLSLAENRL--EGMVPRSGICQNLSKISLTGNK 569
L + + +L + + G +
Sbjct: 492 KLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} Length = 372 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 5e-06
Identities = 41/289 (14%), Positives = 80/289 (27%), Gaps = 55/289 (19%)
Query: 298 FDLSYNRLSGP----IPEELGSCVVVVDLL-LNNNMLSGKIPGSLSR-LTNLTTLDLSRN 351
+L+ R++ + LGS +D + L + L +L L L N
Sbjct: 77 LNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLN 136
Query: 352 QLTGPIPSEFGDSIK-----LQGLYLGNNQLTGS----IPWSLGSLGGLVKLNLTGNKLS 402
L + D + + L L NN LT + + L + L+L L
Sbjct: 137 SLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLG 196
Query: 403 G----------KVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL----NLVGLYLQHNK 448
L L++++N +L+ +L L+L N+
Sbjct: 197 DEGLELLAAQLDRNRQ------LQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNE 250
Query: 449 LSGP-----VDELFSNSAAWKIATMNMSNNLF-DGGLPRSLGNLSYLTNLDLHENKFTGE 502
LS D + ++ + L + D
Sbjct: 251 LSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVSEYWSVILSEVQRNLNSWDR-------- 302
Query: 503 IPPDLGNLMQLEYLDVSRNRL----CGQIPETMCSLSNLLYLSLAENRL 547
+ ++L D+ +R + + + + L
Sbjct: 303 --ARVQRHLELLLRDLEDSRGATLNPWRKAQLLRVEGEVRALLEQLGSS 349
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} Length = 372 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 1e-04
Identities = 42/273 (15%), Positives = 79/273 (28%), Gaps = 48/273 (17%)
Query: 337 LSRLTNLTTLDLSRNQLTGPIPSEFGDSIK-----LQGLYLGNNQLTGSIPWSLGS-LGG 390
L++L L+L+ ++T + + L + L + QL + +L
Sbjct: 68 AEVLSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLR 127
Query: 391 LVKLNLTGNKLSGKVPTSFG-----NLKELTHLDLSFNELDGQ----LPSSLSNILNLVG 441
KL L N L + + ++T L LS N L L L+ ++
Sbjct: 128 ARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTH 187
Query: 442 LYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTG 501
L L H L + +A N L L++ N
Sbjct: 188 LSLLHTGL--------GDEGLELLAAQLDRN--------------RQLQELNVAYNGAGD 225
Query: 502 EIPPDLGNLMQ----LEYLDVSRNRL----CGQIPETMCSLSNLLYLSLAENRLEGMVPR 553
L + LE L + N L + + + + + + EG
Sbjct: 226 TAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVV--SLTEGTAVS 283
Query: 554 SGICQNLSKISLTGNKDLCGKIIGSNCQVKTFG 586
LS++ + + ++
Sbjct: 284 EYWSVILSEV-QRNLNSWDRARVQRHLELLLRD 315
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 5e-06
Identities = 52/255 (20%), Positives = 95/255 (37%), Gaps = 28/255 (10%)
Query: 334 PGSLSRLTNLTTLDLSRNQLTGPIP-SEFGDSIKLQGLYLGNNQLT-GSIPWSLGSLGGL 391
P RL + + + P +E ++Q + L N+ + ++ L L
Sbjct: 61 PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKL 120
Query: 392 VKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNEL--DGQLPSSLSNILNLVGLYLQH-NK 448
L+L G +LS + + L L+LS + L + LS+ L L L
Sbjct: 121 QNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFD 180
Query: 449 LSGPVDELFSNSAAWKIATMNMSN---NLFDGGLPRSLGNLSYLTNLDLHE-NKFTGEIP 504
+ ++ + I +N+S NL L + L +LDL + +
Sbjct: 181 FTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCF 240
Query: 505 PDLGNLMQLEYLDVSRNRLCGQI-PETMCSLSNLLYLSLAENRLEGMVPRSGI------- 556
+ L L++L +SR C I PET+ L + +L ++ G+VP +
Sbjct: 241 QEFFQLNYLQHLSLSR---CYDIIPETLLELGEI--PTLKTLQVFGIVPDGTLQLLKEAL 295
Query: 557 ------CQNLSKISL 565
C + + I+
Sbjct: 296 PHLQINCSHFTTIAR 310
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 6e-06
Identities = 33/118 (27%), Positives = 40/118 (33%), Gaps = 42/118 (35%)
Query: 790 RGLAFLHHGFTPHIIHRDIKASNILLNEEFEA-------------------KVADFGLAR 830
L FLH + H D+K NIL +VADFG
Sbjct: 134 HALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG--- 187
Query: 831 LISACETH--VSTDIAGTFGYIPPE------YGQSGRSTTRGDVYSFGVILLELVTGK 880
SA H +T +A Y PPE + Q DV+S G IL E G
Sbjct: 188 --SATFDHEHHTTIVATRH-YRPPEVILELGWAQPC------DVWSIGCILFEYYRGF 236
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 8e-06
Identities = 30/118 (25%), Positives = 40/118 (33%), Gaps = 42/118 (35%)
Query: 790 RGLAFLHHGFTPHIIHRDIKASNILLNEEFEA-------------------KVADFGLAR 830
+ + FLH + H D+K NIL + KV DFG
Sbjct: 129 KSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG--- 182
Query: 831 LISACETH--VSTDIAGTFGYIPPE------YGQSGRSTTRGDVYSFGVILLELVTGK 880
SA ST ++ Y PE + Q DV+S G IL+E G
Sbjct: 183 --SATYDDEHHSTLVSTRH-YRAPEVILALGWSQPC------DVWSIGCILIEYYLGF 231
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 3e-05
Identities = 60/416 (14%), Positives = 118/416 (28%), Gaps = 62/416 (14%)
Query: 64 NCSMLKSISLSNNFLSGSIPRELCTS-ESLEEIDLDG--NLLTGTIEGVFEKCSNLSQLV 120
+ + L+ I L ++ + S ++ + + L T + + C NL +L
Sbjct: 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELD 162
Query: 121 IFRNHIYGSIPEYLSKLP-----LMVLDLDSN----NFTGIIPVSIWNSETLMEFSAANN 171
+ + + +LS P L+ L++ +F+ + + L
Sbjct: 163 LRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLV-TRCPNLKSLKLNRA 221
Query: 172 LLEGSLPYEVGNAAALERLVL------TNNMLKGHLPKEIGNLSALSVLDLNSNLFDGII 225
+ L + A LE L + L + L L + +
Sbjct: 222 VPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYL 281
Query: 226 PYELGDCISLTTLDLGNNNLS--GLIPEKIADLAQLQCLVLSHN---------------- 267
P C LTTL+L + L+ + + +LQ L +
Sbjct: 282 PAVYSVCSRLTTLNLSYATVQSYDLV-KLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDL 340
Query: 268 ---NLSGPIPSKPSSYFR---------QANMPDL-------SFIQHHGVFDLSYNRLSGP 308
+ P P L + + + ++ N
Sbjct: 341 RELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARN-RPNM 399
Query: 309 IPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGD-SIKL 367
L L L + +L L LS LT + G + K+
Sbjct: 400 TRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLS-GLLTDKVFEYIGTYAKKM 458
Query: 368 QGLYLGNNQLTG-SIPWSLGSLGGLVKLNLTGNKLSGK-VPTSFGNLKELTHLDLS 421
+ L + + + L L KL + K + + L+ + L +S
Sbjct: 459 EMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMS 514
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 2e-04
Identities = 51/404 (12%), Positives = 112/404 (27%), Gaps = 50/404 (12%)
Query: 187 LERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLS 246
L+R+V+T++ L+ + K N L L + C +L LDL +++
Sbjct: 112 LKRMVVTDDCLE-LIAKSFKNFKVLV-LSSCEGFSTDGLAAIAATCRNLKELDLRESDVD 169
Query: 247 GLIPEKIADLA----QLQCLVLS--HNNLSGPI-------------------PSKPSSYF 281
+ ++ L L +S + +S
Sbjct: 170 DVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLAT 229
Query: 282 RQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLT 341
P L + G + + L C + L + + +P S +
Sbjct: 230 LLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCS 289
Query: 342 NLTTLDLSRNQLTGP-IPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNK 400
LTTL+LS + + KLQ L++ + + + L +L + ++
Sbjct: 290 RLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSE 349
Query: 401 LSGKVPTS----------FGNLKELTHLDLSFNELDGQ----LPSSLSNILNLVGLYLQH 446
P +L + ++ + + N+ ++
Sbjct: 350 PFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEP 409
Query: 447 NKLSGPVDELFSNS------AAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFT 500
E + +++S L D + L + +
Sbjct: 410 KAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDS 469
Query: 501 GE-IPPDLGNLMQLEYLDVSRNRLCGQ-IPETMCSLSNLLYLSL 542
+ L L L++ + + L + L +
Sbjct: 470 DLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWM 513
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 5e-04
Identities = 41/279 (14%), Positives = 87/279 (31%), Gaps = 36/279 (12%)
Query: 337 LSRLTNLTTLDLS---RNQLTGPIPSEFGDSI------------KLQGLYLGNNQLTGSI 381
+ R + +++L +P +G + L+ + L +T
Sbjct: 62 IRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDC 121
Query: 382 PWSLG-SLGGLVKLNLTG-NKLSGKVPTSFG-NLKELTHLDLSFNELDGQLPSSLSNILN 438
+ S L L+ S + + L LDL +++D LS+ +
Sbjct: 122 LELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181
Query: 439 LVGLYLQHNKLSGPVDELFSNSAAWKIA-------TMNMSNNLFDGGLPRSLGNLSYLTN 491
L +S + S SA ++ ++ ++ + L L L
Sbjct: 182 TYT-SLVSLNISC-LASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEE 239
Query: 492 LDLH------ENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAEN 545
L + L +L L + + +P S L L+L+
Sbjct: 240 LGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYA 299
Query: 546 RL--EGMVPRSGICQNLSKISLTGN-KDLCGKIIGSNCQ 581
+ +V C L ++ + +D +++ S C+
Sbjct: 300 TVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCK 338
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 6e-04
Identities = 47/337 (13%), Positives = 92/337 (27%), Gaps = 31/337 (9%)
Query: 337 LSRLTNLTTLDLSRNQLTGPIPSEFGDSIK-LQGLYLGN-NQLTGSIPWSLGS-LGGLVK 393
S T L + L R +T S K + L L + + ++ + L +
Sbjct: 101 SSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKE 160
Query: 394 LNLTGNKLSGKVPTSFG----NLKELTHLDLSFNEL---DGQLPSSLSNILNLVGLYLQH 446
L+L + + L L++S L ++ NL L L
Sbjct: 161 LDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNR 220
Query: 447 NKLSGPVDELFSNSAAWKIATMNMSNNLFDG----GLPRSLGNLSYLTNLDLHENKFTGE 502
+ L + + GL +L L L +
Sbjct: 221 AVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAY 280
Query: 503 IPPDLGNLMQLEYLDVSRNRLCGQIPETMCSL----SNLLYLSLAEN-RLEGMVPRSGIC 557
+P +L L++S + L L L + + G+ + C
Sbjct: 281 LPAVYSVCSRLTTLNLSY---ATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTC 337
Query: 558 QNLSKISLTGNKDLCGKIIGSNCQVKTFGKLALL--HAFGLAGLVVGCVFI---VLTTVI 612
++L ++ + + T L + L ++ C + L T+
Sbjct: 338 KDLRELRVFP----SEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIA 393
Query: 613 ALRKQIKRRSRCSDPEEIEETKLNSFSDHNLYFLSSS 649
R + R C + + D +
Sbjct: 394 RNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEH 430
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 45.7 bits (107), Expect = 5e-05
Identities = 30/149 (20%), Positives = 52/149 (34%), Gaps = 18/149 (12%)
Query: 372 LGNNQLTGSIPWSLGSLG--GLVKLNLTGNKLSGKVPTSFG--NLKELTHLDLSF---NE 424
L N ++ G+ S+G L L + L V +L L L L +
Sbjct: 174 LNNLKIKGTNNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDY 233
Query: 425 LDGQLPSSLSNIL------NLVGLYLQHNKLSGPVDELFSNSAAWK-IATMNMS-NNLFD 476
+ + NL L + + V E+F S + TM++S L D
Sbjct: 234 GFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293
Query: 477 GG---LPRSLGNLSYLTNLDLHENKFTGE 502
G L + + +L +++ N + E
Sbjct: 294 EGARLLLDHVDKIKHLKFINMKYNYLSDE 322
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 45.3 bits (106), Expect = 6e-05
Identities = 25/172 (14%), Positives = 61/172 (35%), Gaps = 18/172 (10%)
Query: 208 LSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIA--DLAQLQCLVL- 264
L A+ +L+ + +L +L++ + L + E I DL L+ LVL
Sbjct: 168 LDAMPLLNNLKIKGTNNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227
Query: 265 --SHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDL 322
+ + F + P+L + + E ++ L
Sbjct: 228 VGVEDYGFDGDMNVFRPLFSKDRFPNLK------WLGIVDAEEQNVVVEMFLESDILPQL 281
Query: 323 ---LLNNNMLSGK----IPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKL 367
++ +L+ + + + ++ +L +++ N L+ + E S+ +
Sbjct: 282 ETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPM 333
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 44.6 bits (104), Expect = 1e-04
Identities = 20/137 (14%), Positives = 46/137 (33%), Gaps = 18/137 (13%)
Query: 321 DLLLNNNMLSGKIPGSL--SRLTNLTTLDL---SRNQLTGPIPSEFGDSI------KLQG 369
L + + L + + S L NL L L + + F L+
Sbjct: 197 SLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKW 256
Query: 370 LYLGNNQLTGSIPWSLGS---LGGLVKLNLTGNKLSGK----VPTSFGNLKELTHLDLSF 422
L + + + + L L ++++ L+ + + +K L +++ +
Sbjct: 257 LGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKY 316
Query: 423 NELDGQLPSSLSNILNL 439
N L ++ L L +
Sbjct: 317 NYLSDEMKKELQKSLPM 333
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 7e-05
Identities = 57/264 (21%), Positives = 85/264 (32%), Gaps = 84/264 (31%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK--------HQNL 737
+G G F TV+ + + K VA+K + A+ E+ L V+ + +
Sbjct: 45 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALD-EIRLLKSVRNSDPNDPNREMV 103
Query: 738 VPLLGYCSFDEE------KLLVYEYMVNG-SLDLWLR---NRTGSLEVLGWDKRYKIACG 787
V LL F +V+E + G L W+ + L + I
Sbjct: 104 VQLLD--DFKISGVNGTHICMVFEVL--GHHLLKWIIKSNYQGLPLPCVKK-----IIQQ 154
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILLN------------------------------- 816
+GL +LH IIH DIK NILL+
Sbjct: 155 VLQGLDYLHT--KCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVST 212
Query: 817 ------------------EEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG 858
E+ + K+AD G A + H + DI T Y E
Sbjct: 213 APATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH---KHFTEDI-QTRQYRSLEVLIGS 268
Query: 859 RSTTRGDVYSFGVILLELVTGKEP 882
T D++S + EL TG
Sbjct: 269 GYNTPADIWSTACMAFELATGDYL 292
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 959 | |||
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 100.0 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 100.0 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 100.0 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.97 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.97 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.97 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.96 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.96 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.96 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.96 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.95 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.95 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.95 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.95 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.95 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.95 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.95 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.95 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.95 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.95 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.95 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.94 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.94 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.94 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.94 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.94 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.94 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.93 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.93 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.92 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.92 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.92 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.92 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.91 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.91 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.91 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.9 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.9 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.9 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.9 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.88 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.88 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.88 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.88 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.88 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.88 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.87 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.87 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.87 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.87 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.86 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.86 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.86 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.86 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.86 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.86 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.85 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.83 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.82 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.81 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.79 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.79 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.79 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.77 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.77 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.77 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.77 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.77 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.76 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.76 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.76 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.75 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.75 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.75 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.75 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.73 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.73 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.72 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.72 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.72 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.71 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.7 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.69 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.68 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.67 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.66 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.66 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.65 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.65 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 99.62 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.61 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.6 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.6 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 99.6 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.6 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.58 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.57 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.56 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.56 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.48 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.48 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.46 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.44 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.43 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.43 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.42 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.4 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 99.39 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 99.39 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.29 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.28 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.2 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.2 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.18 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 99.18 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 99.16 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.03 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.93 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.84 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.81 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.76 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.41 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.41 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.33 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.3 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.29 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.29 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.2 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.17 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.04 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 98.02 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 97.97 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.87 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.85 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.75 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.6 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.59 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.42 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.37 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 97.27 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.15 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.14 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.1 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.07 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 97.0 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.0 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 96.89 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 96.75 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 96.46 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 96.25 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 96.08 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 96.03 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 95.64 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 94.88 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 89.6 | |
| 2jwa_A | 44 | Receptor tyrosine-protein kinase ERBB-2; transmemb | 87.05 |
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-70 Score=673.21 Aligned_cols=581 Identities=30% Similarity=0.463 Sum_probs=471.1
Q ss_pred ccccCCCCCcCccccCccchhhhhhc-CCcccCCCc--ccCCCccccEEecCCCcccccCCcCc-cCCCCCcEEEcCCCc
Q 002155 2 LSFNALSGSLPEELSDLPILTFAAEK-NQLSGSLPS--WLGNWNQMESLLLSSNQFIGKIPPEI-GNCSMLKSISLSNNF 77 (959)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lp~--~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~Ls~n~ 77 (959)
+++|++. .+|+.++.+..|+.++.. |++.|.+|. .++++++|++|+|++|++.+.+|..+ ..+++|++|+|++|+
T Consensus 84 ~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 84 LSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp CTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 3455555 455888888888666555 556677887 88888888888888888887777765 788888888888888
Q ss_pred CCCCCCcc---cCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCC-cccEEeccCCcccccc
Q 002155 78 LSGSIPRE---LCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGII 153 (959)
Q Consensus 78 l~~~~p~~---~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~~ 153 (959)
+++..|.. +.++++|++|++++|.+++..+. ..+++|++|++++|.+.+.+|. +..+ +|++|++++|++++.+
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~ 239 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDF 239 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCH
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcc
Confidence 88777666 67777888888888877765443 6777777777777777776666 4444 4777777777777777
Q ss_pred CcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCC-CCCCEEEccCCcCCccCCccccCC
Q 002155 154 PVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNL-SALSVLDLNSNLFDGIIPYELGDC 232 (959)
Q Consensus 154 p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l-~~L~~L~L~~N~i~~~~~~~~~~l 232 (959)
|..+..+++|++|++++|.+.+.+|.. .+++|++|+|++|.+++.+|..+..+ ++|++|+|++|.+++.+|..|+.+
T Consensus 240 ~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l 317 (768)
T 3rgz_A 240 SRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 317 (768)
T ss_dssp HHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGC
T ss_pred cHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcC
Confidence 777777777777777777777666554 67777777777777776677766664 777777777777777777777777
Q ss_pred CCCCEEEcccccCCCCCchh-hhcccCCCeeEcccccCCCCCCCCCcchh---h----------ccCCCCccc--ccccc
Q 002155 233 ISLTTLDLGNNNLSGLIPEK-IADLAQLQCLVLSHNNLSGPIPSKPSSYF---R----------QANMPDLSF--IQHHG 296 (959)
Q Consensus 233 ~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~---~----------~~~~~~l~~--l~~L~ 296 (959)
++|++|+|++|++++.+|.. |..+++|++|++++|++++.+|....... . ....+.+.. +.+|+
T Consensus 318 ~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~ 397 (768)
T 3rgz_A 318 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 397 (768)
T ss_dssp TTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCC
T ss_pred CCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCcc
Confidence 77777777777776555544 77777777777777777665554322111 0 001122222 56789
Q ss_pred ceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcc
Q 002155 297 VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQ 376 (959)
Q Consensus 297 ~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 376 (959)
.|++++|.+++.+|..++.+++|+.|++++|++++..|..|..+++|++|++++|++.+..|..+..+++|+.|++++|+
T Consensus 398 ~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 477 (768)
T 3rgz_A 398 ELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFND 477 (768)
T ss_dssp EEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred EEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccc-
Q 002155 377 LTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDE- 455 (959)
Q Consensus 377 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~- 455 (959)
+++..|..+..+++|++|++++|++++..|.+|+.+++|++|+|++|++++.+|..+..+++|+.|++++|++++..+.
T Consensus 478 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~ 557 (768)
T 3rgz_A 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 557 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGG
T ss_pred ccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999854443
Q ss_pred cccch-------------------------------------------------------------------hhhhhcee
Q 002155 456 LFSNS-------------------------------------------------------------------AAWKIATM 468 (959)
Q Consensus 456 ~~~~~-------------------------------------------------------------------~~~~l~~L 468 (959)
+|... ....++.|
T Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~L 637 (768)
T 3rgz_A 558 MFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 637 (768)
T ss_dssp GGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEE
T ss_pred HhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEE
Confidence 22210 01257789
Q ss_pred ccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCc
Q 002155 469 NMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLE 548 (959)
Q Consensus 469 ~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 548 (959)
++++|+++|.+|..|+++++|+.|+|++|+++|.+|..++.+++|++|||++|+++|.+|..+..+++|++|++++|+++
T Consensus 638 dLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 638 DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717 (768)
T ss_dssp ECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEE
T ss_pred ECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcccCCCccccccCCCCCCCCCCCCCccccccCccc
Q 002155 549 GMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTFGKLA 589 (959)
Q Consensus 549 ~~~~~~~~~~~l~~l~l~~N~~~c~~~~~~~c~~~~~~~~~ 589 (959)
|.+|..++++++...++.|||++||.|+. .|......++.
T Consensus 718 g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~~~~~~~ 757 (768)
T 3rgz_A 718 GPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPSNADGYA 757 (768)
T ss_dssp EECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSCC-----
T ss_pred ccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCCccCCCC
Confidence 99999999999999999999999999987 88765544444
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-66 Score=633.38 Aligned_cols=564 Identities=31% Similarity=0.432 Sum_probs=504.8
Q ss_pred CccccCCCCC---cCccccCccchhhhhhcCCcccCCCcccCCCccccEEecCCCcccccCCc--CccCCCCCcEEEcCC
Q 002155 1 MLSFNALSGS---LPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP--EIGNCSMLKSISLSN 75 (959)
Q Consensus 1 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~Ls~ 75 (959)
+|++++++|. +|+.+..+..|..++...+-+..+|+.|+++++|++|+|++|++.+.+|. .++.+++|++|+|++
T Consensus 56 ~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~ 135 (768)
T 3rgz_A 56 DLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSS 135 (768)
T ss_dssp ECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCS
T ss_pred ECCCCCcCCccCccChhHhccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcC
Confidence 3788999998 99999999888888877666666779999999999999999999999998 999999999999999
Q ss_pred CcCCCCCCccc-CCCCCCcEEEccCccccccCCcc---cccCCCCceeeecccccccccCcccCCCcccEEeccCCcccc
Q 002155 76 NFLSGSIPREL-CTSESLEEIDLDGNLLTGTIEGV---FEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTG 151 (959)
Q Consensus 76 n~l~~~~p~~~-~~l~~L~~L~L~~n~l~~~~~~~---~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~ 151 (959)
|.+++.+|..+ ..+++|++|+|++|++++..+.. +.++++|++|++++|.+.+..|. ....+|++|++++|++++
T Consensus 136 n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~l~~L~~L~Ls~n~l~~ 214 (768)
T 3rgz_A 136 NTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV-SRCVNLEFLDVSSNNFST 214 (768)
T ss_dssp SEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC-TTCTTCCEEECCSSCCCS
T ss_pred CccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc-ccCCcCCEEECcCCcCCC
Confidence 99998888776 88999999999999999888877 89999999999999999977665 334469999999999999
Q ss_pred ccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccC
Q 002155 152 IIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGD 231 (959)
Q Consensus 152 ~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 231 (959)
.+|. +.++++|++|++++|.+++.+|..|+++++|++|+|++|.+++..|.. .+++|++|+|++|.+++.+|..+..
T Consensus 215 ~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~ 291 (768)
T 3rgz_A 215 GIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSG 291 (768)
T ss_dssp CCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCT
T ss_pred CCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHh
Confidence 8887 999999999999999999999999999999999999999999877765 8999999999999999889988877
Q ss_pred C-CCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCC-Ccch--hh----------ccCCCCccccc-ccc
Q 002155 232 C-ISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSK-PSSY--FR----------QANMPDLSFIQ-HHG 296 (959)
Q Consensus 232 l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~~--~~----------~~~~~~l~~l~-~L~ 296 (959)
+ ++|++|+|++|++++.+|..|+.+++|++|+|++|.+.|.+|.. .... .+ ..-...+..+. +|+
T Consensus 292 ~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~ 371 (768)
T 3rgz_A 292 ACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLL 371 (768)
T ss_dssp TCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCS
T ss_pred hcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCc
Confidence 5 99999999999999999999999999999999999998766631 0000 00 01112233444 788
Q ss_pred ceecCCCcCCCCCCcccCC--cccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeC
Q 002155 297 VFDLSYNRLSGPIPEELGS--CVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGN 374 (959)
Q Consensus 297 ~l~L~~n~l~~~~p~~~~~--~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 374 (959)
.|++++|.+++.+|..+.. +++|+.|++++|++++.+|..|..+++|++|++++|++++..|..|..+++|+.|++++
T Consensus 372 ~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 451 (768)
T 3rgz_A 372 TLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWL 451 (768)
T ss_dssp EEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred EEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCC
Confidence 8888888888877877776 78899999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCcc
Q 002155 375 NQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVD 454 (959)
Q Consensus 375 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 454 (959)
|.+++.+|..+..+++|++|++++|++++..|..|.++++|++|+|++|++++.+|..+..+++|+.|++++|++++..+
T Consensus 452 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 531 (768)
T 3rgz_A 452 NMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531 (768)
T ss_dssp SCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECC
T ss_pred CcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ccccchhhhhhceeccCCcccCCCCCccc---------------------------------------------------
Q 002155 455 ELFSNSAAWKIATMNMSNNLFDGGLPRSL--------------------------------------------------- 483 (959)
Q Consensus 455 ~~~~~~~~~~l~~L~ls~N~l~~~~p~~~--------------------------------------------------- 483 (959)
..+.... +++.|++++|.+.+.+|..+
T Consensus 532 ~~l~~l~--~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 609 (768)
T 3rgz_A 532 AELGDCR--SLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLST 609 (768)
T ss_dssp GGGGGCT--TCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGG
T ss_pred HHHcCCC--CCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhcccc
Confidence 7777665 79999999999987777543
Q ss_pred -------------------cCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEeccc
Q 002155 484 -------------------GNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAE 544 (959)
Q Consensus 484 -------------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 544 (959)
+.+++|+.|+|++|+++|.+|..++.+++|++|+|++|+++|.+|..+..+++|++|+|++
T Consensus 610 ~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~ 689 (768)
T 3rgz_A 610 RNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 689 (768)
T ss_dssp TCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCS
T ss_pred ccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCC
Confidence 3467899999999999999999999999999999999999999999999999999999999
Q ss_pred CcCcccCCCC-cccCCCccccccCCCC
Q 002155 545 NRLEGMVPRS-GICQNLSKISLTGNKD 570 (959)
Q Consensus 545 N~l~~~~~~~-~~~~~l~~l~l~~N~~ 570 (959)
|+++|.+|.. ..+..|+.+++++|+.
T Consensus 690 N~l~g~ip~~l~~l~~L~~L~ls~N~l 716 (768)
T 3rgz_A 690 NKLDGRIPQAMSALTMLTEIDLSNNNL 716 (768)
T ss_dssp SCCEECCCGGGGGCCCCSEEECCSSEE
T ss_pred CcccCcCChHHhCCCCCCEEECcCCcc
Confidence 9999988865 5678899999999973
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-61 Score=586.34 Aligned_cols=566 Identities=20% Similarity=0.204 Sum_probs=469.9
Q ss_pred ccccCCCCCcCccccCccchhhhhhcCC-cccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCC
Q 002155 2 LSFNALSGSLPEELSDLPILTFAAEKNQ-LSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSG 80 (959)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 80 (959)
.|.++++ ++|+++. +.++.++..++ +.+..|..|+++++|++|+|++|++.+..|..|+++++|++|+|++|++++
T Consensus 11 cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 87 (680)
T 1ziw_A 11 CSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQ 87 (680)
T ss_dssp CCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCC
T ss_pred CCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCc
Confidence 4677888 8887765 45555555544 444444568888888888888888887777788888888888888888885
Q ss_pred CCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCC-cccEEeccCCccccccCcccc-
Q 002155 81 SIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIW- 158 (959)
Q Consensus 81 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~- 158 (959)
..+..|..+++|++|+|++|+++++++..|+++++|++|++++|.+.+..|..+..+ +|++|++++|++++..+..+.
T Consensus 88 l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 167 (680)
T 1ziw_A 88 LSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDI 167 (680)
T ss_dssp CCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGG
T ss_pred cChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhc
Confidence 555578888888888888888887777888888888888888888887777777665 588888888888877666554
Q ss_pred -cccceeEEEccccccccccCccccCC---------------------------cCCceEeccCCcccccCCccccCCCC
Q 002155 159 -NSETLMEFSAANNLLEGSLPYEVGNA---------------------------AALERLVLTNNMLKGHLPKEIGNLSA 210 (959)
Q Consensus 159 -~~~~L~~L~l~~n~l~~~~~~~~~~l---------------------------~~L~~L~L~~n~i~~~~~~~~~~l~~ 210 (959)
.+++|++|++++|.+++..|..|..+ ++|+.|++++|.+++..|..|.+++.
T Consensus 168 ~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~ 247 (680)
T 1ziw_A 168 FANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKW 247 (680)
T ss_dssp GTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGG
T ss_pred cccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCc
Confidence 45788888888888887777766554 56788888889898888888888765
Q ss_pred --CCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCC
Q 002155 211 --LSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPD 288 (959)
Q Consensus 211 --L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~ 288 (959)
|++|+|++|.+++..|..|+.+++|++|+|++|++++..|..|..+++|+.|++++|...+.++... +....-..
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~---lp~i~~~~ 324 (680)
T 1ziw_A 248 TNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLAS---LPKIDDFS 324 (680)
T ss_dssp SCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC---------CCEECTTT
T ss_pred CCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccccccc---ccccChhh
Confidence 9999999999998888899999999999999999998888899999999999999887654332100 00001114
Q ss_pred ccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCc--ccCCccccCC--CCCCEEEccCCCCCCCCCCCcCCC
Q 002155 289 LSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLS--GKIPGSLSRL--TNLTTLDLSRNQLTGPIPSEFGDS 364 (959)
Q Consensus 289 l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~--~~~~~~~~~l--~~L~~L~Ls~n~l~~~~~~~~~~l 364 (959)
+..+++|+.|++++|.+.+..+..+..+++|+.|++++|.++ ......|..+ ++|+.|++++|++++..|..|..+
T Consensus 325 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l 404 (680)
T 1ziw_A 325 FQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWL 404 (680)
T ss_dssp TTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTC
T ss_pred cccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCC
Confidence 566788999999999999999999999999999999999854 3344455443 689999999999999999999999
Q ss_pred CcceEEEeeCcccCCccc-cccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCcccc--CCCchhhhcccccce
Q 002155 365 IKLQGLYLGNNQLTGSIP-WSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELD--GQLPSSLSNILNLVG 441 (959)
Q Consensus 365 ~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~l~~l~~L~~ 441 (959)
++|+.|++++|.+++.+| ..+..+++|++|++++|++.+..+..|..+++|++|++++|.+. +..|..+..+++|+.
T Consensus 405 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~ 484 (680)
T 1ziw_A 405 GHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTI 484 (680)
T ss_dssp TTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCE
T ss_pred CCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCE
Confidence 999999999999987655 78999999999999999999889999999999999999999987 468899999999999
Q ss_pred EeeccccccCCccccccchhhhhhceeccCCcccCCCCC--------ccccCccccceeeeccccccccCCcCCcCCCCC
Q 002155 442 LYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLP--------RSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQL 513 (959)
Q Consensus 442 L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 513 (959)
|++++|+++++++..|.... +++.|++++|.+++..+ ..|.++++|+.|+|++|+++...+..|.++++|
T Consensus 485 L~Ls~N~l~~i~~~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L 562 (680)
T 1ziw_A 485 LDLSNNNIANINDDMLEGLE--KLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFEL 562 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCT--TCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred EECCCCCCCcCChhhhcccc--ccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCc
Confidence 99999999999999888766 79999999999986422 247899999999999999995444579999999
Q ss_pred cEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCc--ccCCCccccccCCCCCCCCC
Q 002155 514 EYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSG--ICQNLSKISLTGNKDLCGKI 575 (959)
Q Consensus 514 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~--~~~~l~~l~l~~N~~~c~~~ 575 (959)
++|+|++|+|++..+..|..+++|+.|++++|+++++++... .+.+++.+++.+|||.|+|.
T Consensus 563 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 563 KIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred ceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 999999999998888889999999999999999999888653 57899999999999999764
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-57 Score=551.57 Aligned_cols=539 Identities=22% Similarity=0.200 Sum_probs=471.4
Q ss_pred CccccCCCCCcCccccCccchhhhhhc-CCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCC
Q 002155 1 MLSFNALSGSLPEELSDLPILTFAAEK-NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLS 79 (959)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 79 (959)
.||.|.+++..|+.+..++.|+.++.. |++.+..|.+|++++.|++|+|++|++.+..+..|+++++|++|+|++|+++
T Consensus 31 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~ 110 (680)
T 1ziw_A 31 NLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQ 110 (680)
T ss_dssp ECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC
T ss_pred ECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccC
Confidence 378999996666679999999777776 5566777889999999999999999999555557999999999999999999
Q ss_pred CCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccC---CCcccEEeccCCccccccCcc
Q 002155 80 GSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLS---KLPLMVLDLDSNNFTGIIPVS 156 (959)
Q Consensus 80 ~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~---~~~L~~L~ls~n~l~~~~p~~ 156 (959)
+..|..|+.+++|++|++++|.+++..++.|.++++|++|++++|.+.+..+..+. ..+|++|++++|++++..|..
T Consensus 111 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 190 (680)
T 1ziw_A 111 KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGC 190 (680)
T ss_dssp CCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTG
T ss_pred ccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhh
Confidence 87778999999999999999999999999999999999999999999988777554 346999999999999998887
Q ss_pred cccc---------------------------cceeEEEccccccccccCccccCCcC--CceEeccCCcccccCCccccC
Q 002155 157 IWNS---------------------------ETLMEFSAANNLLEGSLPYEVGNAAA--LERLVLTNNMLKGHLPKEIGN 207 (959)
Q Consensus 157 ~~~~---------------------------~~L~~L~l~~n~l~~~~~~~~~~l~~--L~~L~L~~n~i~~~~~~~~~~ 207 (959)
+..+ ++|++|++++|.+++..|..|.+++. |++|+|++|.+++..+..|..
T Consensus 191 ~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~ 270 (680)
T 1ziw_A 191 FHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAW 270 (680)
T ss_dssp GGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTT
T ss_pred hhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccC
Confidence 7765 45677888888898888999998876 999999999999888899999
Q ss_pred CCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCC-----CCc----hhhhcccCCCeeEcccccCCCCCCCCCc
Q 002155 208 LSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSG-----LIP----EKIADLAQLQCLVLSHNNLSGPIPSKPS 278 (959)
Q Consensus 208 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-----~~~----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 278 (959)
+++|++|+|++|.+.+..|..|.++++|++|++++|...+ .+| ..|..+++|++|++++|.+++..+.
T Consensus 271 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~--- 347 (680)
T 1ziw_A 271 LPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSN--- 347 (680)
T ss_dssp CTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTT---
T ss_pred cccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChh---
Confidence 9999999999999999999999999999999999886542 122 3788999999999999999864432
Q ss_pred chhhccCCCCccccccccceecCCCcCCCC--CCcccCCc--ccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCC
Q 002155 279 SYFRQANMPDLSFIQHHGVFDLSYNRLSGP--IPEELGSC--VVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLT 354 (959)
Q Consensus 279 ~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~--~p~~~~~~--~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~ 354 (959)
.+..+.+|+.|++++|.+... .+..+..+ ..|+.|++++|++++..|.+|..+++|++|++++|++.
T Consensus 348 ---------~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 418 (680)
T 1ziw_A 348 ---------MFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIG 418 (680)
T ss_dssp ---------TTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCE
T ss_pred ---------HhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCc
Confidence 245567889999999985432 23334333 58999999999999999999999999999999999998
Q ss_pred CCCC-CCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCC--CCCCCccCCcccccccccCCccccCCCch
Q 002155 355 GPIP-SEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLS--GKVPTSFGNLKELTHLDLSFNELDGQLPS 431 (959)
Q Consensus 355 ~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 431 (959)
+..| ..|.++++|++|++++|++++..+..|..+++|+.|++++|.+. +..|..|.++++|++|++++|++++..+.
T Consensus 419 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~ 498 (680)
T 1ziw_A 419 QELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDD 498 (680)
T ss_dssp EECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred cccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChh
Confidence 6544 78999999999999999999888999999999999999999987 56789999999999999999999988888
Q ss_pred hhhcccccceEeeccccccCCcccc--------ccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccC
Q 002155 432 SLSNILNLVGLYLQHNKLSGPVDEL--------FSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEI 503 (959)
Q Consensus 432 ~l~~l~~L~~L~L~~N~l~~~~~~~--------~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 503 (959)
.|..+++|+.|++++|++++++... |.... .++.|++++|.++...+..|.++++|+.|+|++|++++..
T Consensus 499 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~--~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~ 576 (680)
T 1ziw_A 499 MLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLS--HLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLP 576 (680)
T ss_dssp TTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCT--TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred hhccccccCEEeCCCCCccccchhhccCCcchhhcCCC--CCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCC
Confidence 8999999999999999999875443 34333 7999999999999766678999999999999999999777
Q ss_pred CcCCcCCCCCcEEeCCCCcCCCCCCcccc-CCCCccEEecccCcCcccCCC
Q 002155 504 PPDLGNLMQLEYLDVSRNRLCGQIPETMC-SLSNLLYLSLAENRLEGMVPR 553 (959)
Q Consensus 504 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~~ 553 (959)
+..|..+++|++|+|++|+|++..|..+. .+++|+.|++++|++.+..+.
T Consensus 577 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 577 ASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred HhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 77789999999999999999998888887 799999999999999987764
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-57 Score=540.54 Aligned_cols=528 Identities=21% Similarity=0.197 Sum_probs=406.7
Q ss_pred hhcCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccc
Q 002155 25 AEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTG 104 (959)
Q Consensus 25 ~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 104 (959)
+-.+.-...+|..+.. .+++|+|++|++.+..|..|+++++|++|+|++|++++..|.+|.++++|++|+|++|++++
T Consensus 18 ~c~~~~l~~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~ 95 (606)
T 3t6q_A 18 NCENLGLNEIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIF 95 (606)
T ss_dssp ECTTSCCSSCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSE
T ss_pred ECCCCCcccCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccc
Confidence 3344445567776654 67888888888887777788888888888888888887778888888888888888888887
Q ss_pred cCCcccccCCCCceeeecccccccccCcccCCC-cccEEeccCCccccccCcccccccceeEEEccccccccccCccccC
Q 002155 105 TIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGN 183 (959)
Q Consensus 105 ~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 183 (959)
..|..|+++++|++|++++|.+.+..|..+..+ +|++|++++|++++..+..+..+++|++|++++|.+++..|..|+.
T Consensus 96 ~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 175 (606)
T 3t6q_A 96 MAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSS 175 (606)
T ss_dssp ECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHT
T ss_pred cChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhh
Confidence 778888888888888888888887666666666 4888888888888755455555888888888888888777777888
Q ss_pred CcCCc--eEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccC-----CCCCchhhhcc
Q 002155 184 AAALE--RLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNL-----SGLIPEKIADL 256 (959)
Q Consensus 184 l~~L~--~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l-----~~~~~~~~~~l 256 (959)
+++|+ .|++++|.+++..|..|.. .+|+.|++++|. ..+..+.++.++....+.-+.+ ..+.+..|..+
T Consensus 176 l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l 251 (606)
T 3t6q_A 176 LQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGL 251 (606)
T ss_dssp TTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGG
T ss_pred hcccceeEEecCCCccCccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhccccccccChhHhchh
Confidence 88888 7888888888766665544 578888888775 2334444444444333322221 12233444444
Q ss_pred c--CCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCC
Q 002155 257 A--QLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIP 334 (959)
Q Consensus 257 ~--~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~ 334 (959)
. +|+.|++++|.+++..+. .+..+++|+.|++++|.++ .+|..+..+++|+.|++++|++++..|
T Consensus 252 ~~~~L~~L~l~~n~l~~~~~~------------~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~ 318 (606)
T 3t6q_A 252 CEMSVESINLQKHYFFNISSN------------TFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQ 318 (606)
T ss_dssp GGSEEEEEECTTCCCSSCCTT------------TTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGG
T ss_pred hcCceeEEEeecCccCccCHH------------HhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCch
Confidence 4 677777777777643221 2344566777777777777 667778888888888888888887777
Q ss_pred ccccCCCCCCEEEccCCCCCCCCC-CCcCCCCcceEEEeeCcccCCcc--ccccccCCCCcEEEccCCcCCCCCCCccCC
Q 002155 335 GSLSRLTNLTTLDLSRNQLTGPIP-SEFGDSIKLQGLYLGNNQLTGSI--PWSLGSLGGLVKLNLTGNKLSGKVPTSFGN 411 (959)
Q Consensus 335 ~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 411 (959)
..+..+++|++|++++|.+.+..+ ..+..+++|++|++++|.+++.. +..+..+++|++|++++|++.+..|..|..
T Consensus 319 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 398 (606)
T 3t6q_A 319 ISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKE 398 (606)
T ss_dssp GCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTT
T ss_pred hhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcC
Confidence 788888888888888888774443 45778888888888888887655 667888888888888888888777888888
Q ss_pred cccccccccCCccccCCCch-hhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCC---CCCccccCcc
Q 002155 412 LKELTHLDLSFNELDGQLPS-SLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDG---GLPRSLGNLS 487 (959)
Q Consensus 412 l~~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~---~~p~~~~~l~ 487 (959)
+++|++|++++|++++..+. .+..+++|+.|++++|++++.++..|.... +++.|++++|.+++ ..+..+..++
T Consensus 399 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~L~~n~l~~~~~~~~~~~~~l~ 476 (606)
T 3t6q_A 399 CPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLP--ALQHLNLQGNHFPKGNIQKTNSLQTLG 476 (606)
T ss_dssp CTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCT--TCCEEECTTCBCGGGEECSSCGGGGCT
T ss_pred CccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCC--CCCEEECCCCCCCccccccchhhccCC
Confidence 88888888888888766543 478888888888888888887777776655 78888888888876 2346789999
Q ss_pred ccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCC-cccCCCcccccc
Q 002155 488 YLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS-GICQNLSKISLT 566 (959)
Q Consensus 488 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~ 566 (959)
+|++|+|++|++++..|..++.+++|++|+|++|++++..|..+..++.| +|++++|++++.+|.. ..+.+|+.+++.
T Consensus 477 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 555 (606)
T 3t6q_A 477 RLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLR 555 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECT
T ss_pred CccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCC
Confidence 99999999999998889999999999999999999999999999999999 9999999999998875 557889999999
Q ss_pred CCCCCCCC
Q 002155 567 GNKDLCGK 574 (959)
Q Consensus 567 ~N~~~c~~ 574 (959)
+|||.|+|
T Consensus 556 ~N~~~c~c 563 (606)
T 3t6q_A 556 QNPLDCTC 563 (606)
T ss_dssp TCCEECSG
T ss_pred CCCccccC
Confidence 99999954
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-55 Score=530.50 Aligned_cols=528 Identities=20% Similarity=0.164 Sum_probs=433.9
Q ss_pred hhhhcCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccc
Q 002155 23 FAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLL 102 (959)
Q Consensus 23 ~~~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l 102 (959)
.++-.++-.+.+|..+. +.+++|+|++|++.+..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 15 ~~~c~~~~l~~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l 92 (606)
T 3vq2_A 15 TYQCMDQKLSKVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPI 92 (606)
T ss_dssp EEECTTSCCSSCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred ceEccCCCcccCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcc
Confidence 34555556667887665 6788888888888877777888888888888888888877788888888888888888888
Q ss_pred cccCCcccccCCCCceeeecccccccccCcccCCC-cccEEeccCCcccc-ccCcccccccceeEEEccccccccccCcc
Q 002155 103 TGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTG-IIPVSIWNSETLMEFSAANNLLEGSLPYE 180 (959)
Q Consensus 103 ~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~-~~p~~~~~~~~L~~L~l~~n~l~~~~~~~ 180 (959)
++..|..|+++++|++|++++|.+.+..|..+..+ +|++|++++|++++ .+|..+.++++|++|++++|.+++..|..
T Consensus 93 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~ 172 (606)
T 3vq2_A 93 QSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVND 172 (606)
T ss_dssp CCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTT
T ss_pred cccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhh
Confidence 88888888888888888888888887777777766 48888888888876 45888888888888888888888777777
Q ss_pred ccCCcCCc----eEeccCCcccccCCccccCCCCCCEEEccCCcCC-ccCCccccCCCCCCEEEcccccCCC------CC
Q 002155 181 VGNAAALE----RLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFD-GIIPYELGDCISLTTLDLGNNNLSG------LI 249 (959)
Q Consensus 181 ~~~l~~L~----~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~N~l~~------~~ 249 (959)
|+.+++|+ +|++++|.+++..+..+... +|+.|++++|.+. ...|..+.++++|+.+++..+.+.. ..
T Consensus 173 ~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~ 251 (606)
T 3vq2_A 173 LQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFE 251 (606)
T ss_dssp THHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCC
T ss_pred hhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccC
Confidence 87777765 78888888886555555554 7888888888876 4567778888888888876554432 22
Q ss_pred chhhhccc--CCCeeEc-ccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccC
Q 002155 250 PEKIADLA--QLQCLVL-SHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNN 326 (959)
Q Consensus 250 ~~~~~~l~--~L~~L~L-s~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~ 326 (959)
+..+..+. +++.+++ ..|.+.+.+ +.+..+.+++.+++++|.+. .+| .+..+++|+.|++.+
T Consensus 252 ~~~~~~l~~l~l~~l~l~~~~~~~~~~-------------~~~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~ 316 (606)
T 3vq2_A 252 PSIMEGLCDVTIDEFRLTYTNDFSDDI-------------VKFHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIR 316 (606)
T ss_dssp GGGGTTGGGSEEEEEEECCCTTCCGGG-------------GSCGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEES
T ss_pred hHHhhhhhhccHhheeccccccccccc-------------cccccCCCCCEEEecCccch-hhh-hccccccCCEEEccc
Confidence 33333333 3445555 455554332 23667788899999999997 455 888999999999999
Q ss_pred CcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCcc--ccccccCCCCcEEEccCCcCCCC
Q 002155 327 NMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSI--PWSLGSLGGLVKLNLTGNKLSGK 404 (959)
Q Consensus 327 n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~N~i~~~ 404 (959)
|.++ .+| .+ .+++|++|++++|+..+. ..+..+++|+.|++++|.+++.. +..+..+++|++|++++|.+++
T Consensus 317 n~l~-~lp-~~-~l~~L~~L~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~- 390 (606)
T 3vq2_A 317 CQLK-QFP-TL-DLPFLKSLTLTMNKGSIS--FKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII- 390 (606)
T ss_dssp CCCS-SCC-CC-CCSSCCEEEEESCSSCEE--CCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-
T ss_pred ccCc-ccc-cC-CCCccceeeccCCcCccc--hhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-
Confidence 9994 666 45 999999999999965533 36778999999999999998653 7888999999999999999985
Q ss_pred CCCccCCcccccccccCCccccCCCc-hhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCC-CCCcc
Q 002155 405 VPTSFGNLKELTHLDLSFNELDGQLP-SSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDG-GLPRS 482 (959)
Q Consensus 405 ~~~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~-~~p~~ 482 (959)
.|..|.++++|++|++++|++.+..| ..+..+++|+.|++++|++++..+..|.... +++.|++++|.+++ .+|..
T Consensus 391 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~~~~ 468 (606)
T 3vq2_A 391 MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLT--SLNTLKMAGNSFKDNTLSNV 468 (606)
T ss_dssp ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCT--TCCEEECTTCEEGGGEECSC
T ss_pred chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCC--CCCEEECCCCcCCCcchHHh
Confidence 66889999999999999999998777 6899999999999999999998888777665 89999999999998 48999
Q ss_pred ccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccC-CCc
Q 002155 483 LGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQ-NLS 561 (959)
Q Consensus 483 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-~l~ 561 (959)
|..+++|+.|+|++|++++..|..+..+++|++|+|++|++++..|..+..+++|++|++++|+++++++....+. +|+
T Consensus 469 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~ 548 (606)
T 3vq2_A 469 FANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLA 548 (606)
T ss_dssp CTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCC
T ss_pred hccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCc
Confidence 9999999999999999999889999999999999999999999889999999999999999999998888766665 599
Q ss_pred cccccCCCCCCCCCC
Q 002155 562 KISLTGNKDLCGKII 576 (959)
Q Consensus 562 ~l~l~~N~~~c~~~~ 576 (959)
.+++.+|||.|+|++
T Consensus 549 ~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 549 FFNLTNNSVACICEH 563 (606)
T ss_dssp EEECCSCCCCCSSTT
T ss_pred EEEccCCCcccCCcc
Confidence 999999999997643
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-55 Score=539.74 Aligned_cols=518 Identities=21% Similarity=0.205 Sum_probs=420.6
Q ss_pred CcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCC-CcccCCCCCCcEEEccCccccccCC
Q 002155 29 QLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSI-PRELCTSESLEEIDLDGNLLTGTIE 107 (959)
Q Consensus 29 ~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~~ 107 (959)
+-.+.+|. -.+.+++|+|++|++.+..|..|.++++|++|+|++|...+.+ |.+|.++++|++|+|++|.+++..|
T Consensus 14 ~~L~~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 14 CNLTQVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCSSCCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 33446776 3467888888888888777888888888888888888554444 7778888888888888888888888
Q ss_pred cccccCCCCceeeecccccccccCcc--cCCC-cccEEeccCCccccccC-cccccccceeEEEccccccccccCccccC
Q 002155 108 GVFEKCSNLSQLVIFRNHIYGSIPEY--LSKL-PLMVLDLDSNNFTGIIP-VSIWNSETLMEFSAANNLLEGSLPYEVGN 183 (959)
Q Consensus 108 ~~~~~l~~L~~L~L~~n~~~~~~p~~--~~~~-~L~~L~ls~n~l~~~~p-~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 183 (959)
..|.++++|++|+|++|.+.+..|.. +..+ +|++|++++|++++..+ ..|.++++|++|++++|.+++..+..+..
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~ 170 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEP 170 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccc
Confidence 88888888888888888888755543 5555 58888888888887655 46888888888888888888888888887
Q ss_pred C--cCCceEeccCCcccccCCccccCCCC------CCEEEccCCcCCccCCccccCC---CCCCEEEccc---------c
Q 002155 184 A--AALERLVLTNNMLKGHLPKEIGNLSA------LSVLDLNSNLFDGIIPYELGDC---ISLTTLDLGN---------N 243 (959)
Q Consensus 184 l--~~L~~L~L~~n~i~~~~~~~~~~l~~------L~~L~L~~N~i~~~~~~~~~~l---~~L~~L~L~~---------N 243 (959)
+ ++|+.|+|++|.+.+..|..+..+.+ |+.|++++|.+++..+..+... .+++.|.+++ +
T Consensus 171 l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~ 250 (844)
T 3j0a_A 171 LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 250 (844)
T ss_dssp HHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCS
T ss_pred ccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccc
Confidence 7 88888888888888877777766665 8888888888887777766543 5677787763 3
Q ss_pred cCCCCCchhhhcc--cCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccE
Q 002155 244 NLSGLIPEKIADL--AQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVD 321 (959)
Q Consensus 244 ~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~ 321 (959)
.+.......|..+ ++|+.|+|++|.+.+..|. .+..+++|+.|++++|.+++..|..|..+++|+.
T Consensus 251 ~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~------------~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 318 (844)
T 3j0a_A 251 NIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSR------------VFETLKDLKVLNLAYNKINKIADEAFYGLDNLQV 318 (844)
T ss_dssp SSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSC------------CSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCE
T ss_pred ccCCCChhhhhccccCCccEEECCCCcccccChh------------hhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCE
Confidence 4444445556655 6789999999888743332 3455677888999999998888889999999999
Q ss_pred EEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcC
Q 002155 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKL 401 (959)
Q Consensus 322 L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i 401 (959)
|++++|.+++..+..|..+++|++|++++|.+....+..|..+++|+.|++++|.+++. ..+++|+.|++++|++
T Consensus 319 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l 393 (844)
T 3j0a_A 319 LNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKL 393 (844)
T ss_dssp EEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCC
T ss_pred EECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCc
Confidence 99999999988899999999999999999999988888899999999999999999842 3378899999999999
Q ss_pred CCCCCCccCCcccccccccCCccccCCC-chhhhcccccceEeeccccccCCccc-cccchhhhhhceeccCCcccC---
Q 002155 402 SGKVPTSFGNLKELTHLDLSFNELDGQL-PSSLSNILNLVGLYLQHNKLSGPVDE-LFSNSAAWKIATMNMSNNLFD--- 476 (959)
Q Consensus 402 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~~~~~~l~~L~ls~N~l~--- 476 (959)
+ .+|.. ..+++.|++++|++++.. +..+..+++|+.|++++|++++.+.. .+.. ..+++.|++++|.++
T Consensus 394 ~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~--~~~L~~L~Ls~N~l~~~~ 467 (844)
T 3j0a_A 394 V-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSE--NPSLEQLFLGENMLQLAW 467 (844)
T ss_dssp C-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCS--CTTCCBCEEESCCCSSSC
T ss_pred c-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCccccccccccccc--CCccccccCCCCcccccc
Confidence 8 44543 457899999999998643 23466899999999999999877654 2333 237899999999997
Q ss_pred --CCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCC
Q 002155 477 --GGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS 554 (959)
Q Consensus 477 --~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 554 (959)
+..+..|.++++|+.|+|++|++++..|..|..+++|++|+|++|+|++..|..+. ++|+.|++++|+|++.+|..
T Consensus 468 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~ 545 (844)
T 3j0a_A 468 ETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV 545 (844)
T ss_dssp CSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC
T ss_pred ccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH
Confidence 45567789999999999999999988888999999999999999999987777776 89999999999999999865
Q ss_pred cccCCCccccccCCCCCCCCCC
Q 002155 555 GICQNLSKISLTGNKDLCGKII 576 (959)
Q Consensus 555 ~~~~~l~~l~l~~N~~~c~~~~ 576 (959)
+.+++.+++.+|||.|+|.+
T Consensus 546 --~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 546 --FVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp --CSSCCEEEEEEECCCCSSSC
T ss_pred --hCCcCEEEecCCCccccccc
Confidence 56899999999999998865
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-55 Score=528.48 Aligned_cols=529 Identities=19% Similarity=0.183 Sum_probs=450.0
Q ss_pred ccccCCCCCcCccccCccchhhhhhc-CCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCC
Q 002155 2 LSFNALSGSLPEELSDLPILTFAAEK-NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSG 80 (959)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 80 (959)
.+..+++ .+|+.+.. .++.++.. |++.+..|.+|+++++|++|+|++|++.+..|..|+++++|++|+|++|++++
T Consensus 19 c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~ 95 (606)
T 3t6q_A 19 CENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIF 95 (606)
T ss_dssp CTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSE
T ss_pred CCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccc
Confidence 3567788 88987764 34444444 56666668899999999999999999998889999999999999999999998
Q ss_pred CCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccc-cCcccCCCcccEEeccCCccccccCccccc
Q 002155 81 SIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGS-IPEYLSKLPLMVLDLDSNNFTGIIPVSIWN 159 (959)
Q Consensus 81 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~-~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~ 159 (959)
..|..|.++++|++|++++|++++..+..|.++++|++|++++|.+.+. .|..+...+|++|++++|++++..|..+..
T Consensus 96 ~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 175 (606)
T 3t6q_A 96 MAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSS 175 (606)
T ss_dssp ECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHT
T ss_pred cChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhh
Confidence 8899999999999999999999998889999999999999999999974 466666557999999999999998999999
Q ss_pred cccee--EEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCC-----ccCCccccCC
Q 002155 160 SETLM--EFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFD-----GIIPYELGDC 232 (959)
Q Consensus 160 ~~~L~--~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~-----~~~~~~~~~l 232 (959)
+++|+ +|++++|.+++..|..|.. .+|++|++++|.. .+..+..+.+++...+.-+.+. .+.+..+..+
T Consensus 176 l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~---~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l 251 (606)
T 3t6q_A 176 LQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQN---LLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGL 251 (606)
T ss_dssp TTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSC---HHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGG
T ss_pred hcccceeEEecCCCccCccChhHhhh-ccccccccCCchh---HHHHhhhccccchhheechhhccccccccChhHhchh
Confidence 99999 9999999999877776655 6899999999972 3455666666555444433222 2333444444
Q ss_pred C--CCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCC
Q 002155 233 I--SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIP 310 (959)
Q Consensus 233 ~--~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p 310 (959)
. +|++|++++|+++++.+..|..+++|++|++++|.++ .+|. .+..+++|+.|++++|.+.+..|
T Consensus 252 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~------------~l~~l~~L~~L~l~~n~l~~~~~ 318 (606)
T 3t6q_A 252 CEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPS------------GLVGLSTLKKLVLSANKFENLCQ 318 (606)
T ss_dssp GGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCS------------SCCSCTTCCEEECTTCCCSBGGG
T ss_pred hcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCCh------------hhcccccCCEEECccCCcCcCch
Confidence 3 6889999999998888888999999999999999887 2332 24456778889999999988888
Q ss_pred cccCCcccccEEEccCCcCcccCC-ccccCCCCCCEEEccCCCCCCCC--CCCcCCCCcceEEEeeCcccCCcccccccc
Q 002155 311 EELGSCVVVVDLLLNNNMLSGKIP-GSLSRLTNLTTLDLSRNQLTGPI--PSEFGDSIKLQGLYLGNNQLTGSIPWSLGS 387 (959)
Q Consensus 311 ~~~~~~~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~--~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 387 (959)
..+..+++|+.|++++|.+.+..+ ..|..+++|++|++++|.+.+.. +..+..+++|+.|++++|.+.+..|..+..
T Consensus 319 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 398 (606)
T 3t6q_A 319 ISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKE 398 (606)
T ss_dssp GCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTT
T ss_pred hhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcC
Confidence 899999999999999999885544 56899999999999999998765 778899999999999999999888889999
Q ss_pred CCCCcEEEccCCcCCCCCCC-ccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCc---cccccchhhh
Q 002155 388 LGGLVKLNLTGNKLSGKVPT-SFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPV---DELFSNSAAW 463 (959)
Q Consensus 388 l~~L~~L~L~~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~---~~~~~~~~~~ 463 (959)
+++|++|++++|++.+..+. .|.++++|++|++++|.+++..|..+..+++|+.|++++|++++.. +..|....
T Consensus 399 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~-- 476 (606)
T 3t6q_A 399 CPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLG-- 476 (606)
T ss_dssp CTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCT--
T ss_pred CccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCC--
Confidence 99999999999999877654 4889999999999999999888899999999999999999998632 23454444
Q ss_pred hhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecc
Q 002155 464 KIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLA 543 (959)
Q Consensus 464 ~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 543 (959)
+++.|++++|.+++..|..|.++++|+.|+|++|++++..|..+..++.| +|++++|++++..|..+..+++|+.|+++
T Consensus 477 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 555 (606)
T 3t6q_A 477 RLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLR 555 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECT
T ss_pred CccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCC
Confidence 79999999999999899999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred cCcCcccCCC
Q 002155 544 ENRLEGMVPR 553 (959)
Q Consensus 544 ~N~l~~~~~~ 553 (959)
+|++.+..+.
T Consensus 556 ~N~~~c~c~~ 565 (606)
T 3t6q_A 556 QNPLDCTCSN 565 (606)
T ss_dssp TCCEECSGGG
T ss_pred CCCccccCCc
Confidence 9999987654
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-54 Score=517.11 Aligned_cols=525 Identities=19% Similarity=0.184 Sum_probs=450.0
Q ss_pred ccccCCCCCcCccccCccchhhhhhc-CCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCC
Q 002155 2 LSFNALSGSLPEELSDLPILTFAAEK-NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSG 80 (959)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 80 (959)
.+.++++ .+|+.+. +.++.++.. |++.+..|..|+++++|++|+|++|++.+..|..|+++++|++|+|++|++++
T Consensus 18 c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~ 94 (606)
T 3vq2_A 18 CMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQS 94 (606)
T ss_dssp CTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCC
T ss_pred ccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccc
Confidence 4778999 9999876 556555555 55555556699999999999999999998888899999999999999999998
Q ss_pred CCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeeccccccc-ccCcccCCC-cccEEeccCCccccccCcccc
Q 002155 81 SIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYG-SIPEYLSKL-PLMVLDLDSNNFTGIIPVSIW 158 (959)
Q Consensus 81 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~-~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~ 158 (959)
..|.+|+++++|++|++++|++++..+..|+++++|++|++++|.+.+ .+|..+..+ +|++|++++|++++..|..+.
T Consensus 95 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 174 (606)
T 3vq2_A 95 FSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQ 174 (606)
T ss_dssp CCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTH
T ss_pred cChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhh
Confidence 889999999999999999999999888999999999999999999986 568888777 599999999999999999898
Q ss_pred ccccee----EEEccccccccccCccccCCcCCceEeccCCccc-ccCCccccCCCCCCEEEccCCcCCc------cCCc
Q 002155 159 NSETLM----EFSAANNLLEGSLPYEVGNAAALERLVLTNNMLK-GHLPKEIGNLSALSVLDLNSNLFDG------IIPY 227 (959)
Q Consensus 159 ~~~~L~----~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~N~i~~------~~~~ 227 (959)
.+.+|+ +|++++|.+++..+..+... +|++|++++|.++ +..|..+.++++|+.+++..+.+.. ..+.
T Consensus 175 ~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~ 253 (606)
T 3vq2_A 175 FLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPS 253 (606)
T ss_dssp HHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGG
T ss_pred hhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChH
Confidence 888765 89999999996666666555 9999999999997 4678889999999999987655432 2222
Q ss_pred cccCCC--CCCEEEc-ccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCc
Q 002155 228 ELGDCI--SLTTLDL-GNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNR 304 (959)
Q Consensus 228 ~~~~l~--~L~~L~L-~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~ 304 (959)
.+..+. +++.+++ ..|.+.+..|. +..+++|+.|++++|.+.. ++.+..+.+|+.|++++|.
T Consensus 254 ~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~--------------l~~l~~~~~L~~L~l~~n~ 318 (606)
T 3vq2_A 254 IMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY--------------LEDVPKHFKWQSLSIIRCQ 318 (606)
T ss_dssp GGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC--------------CCCCCTTCCCSEEEEESCC
T ss_pred HhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchh--------------hhhccccccCCEEEccccc
Confidence 233332 4667777 67788877776 8999999999999998852 3345567788899999999
Q ss_pred CCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCC--CCCCcCCCCcceEEEeeCcccCCccc
Q 002155 305 LSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGP--IPSEFGDSIKLQGLYLGNNQLTGSIP 382 (959)
Q Consensus 305 l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~--~~~~~~~l~~L~~L~L~~n~l~~~~~ 382 (959)
+ +.+| .+ .+++|+.|++++|...+.. .+..+++|++|++++|++++. .+..+..+++|+.|++++|.++ .+|
T Consensus 319 l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~ 392 (606)
T 3vq2_A 319 L-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMS 392 (606)
T ss_dssp C-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EEC
T ss_pred C-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cch
Confidence 9 5777 45 8999999999999655433 677899999999999999865 3778889999999999999998 466
Q ss_pred cccccCCCCcEEEccCCcCCCCCC-CccCCcccccccccCCccccCCCchhhhcccccceEeeccccccC-Cccccccch
Q 002155 383 WSLGSLGGLVKLNLTGNKLSGKVP-TSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSG-PVDELFSNS 460 (959)
Q Consensus 383 ~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~~ 460 (959)
..+..+++|++|++++|++.+..+ ..|.++++|++|++++|++++..|..+..+++|+.|++++|++++ +.+..|...
T Consensus 393 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l 472 (606)
T 3vq2_A 393 ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANT 472 (606)
T ss_dssp CCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTC
T ss_pred hhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccC
Confidence 889999999999999999998777 689999999999999999998889999999999999999999987 466667665
Q ss_pred hhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCC-CccE
Q 002155 461 AAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLS-NLLY 539 (959)
Q Consensus 461 ~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~ 539 (959)
. +++.|++++|.+++..|..|.++++|++|+|++|++++.+|..+..+++|++|+|++|+|+ .+|..+..++ +|++
T Consensus 473 ~--~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~ 549 (606)
T 3vq2_A 473 T--NLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAF 549 (606)
T ss_dssp T--TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCE
T ss_pred C--CCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcE
Confidence 5 8999999999999999999999999999999999999888999999999999999999999 5777799997 5999
Q ss_pred EecccCcCcccCCCC
Q 002155 540 LSLAENRLEGMVPRS 554 (959)
Q Consensus 540 L~l~~N~l~~~~~~~ 554 (959)
|++++|++.+..+..
T Consensus 550 l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 550 FNLTNNSVACICEHQ 564 (606)
T ss_dssp EECCSCCCCCSSTTH
T ss_pred EEccCCCcccCCccH
Confidence 999999999877654
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-53 Score=521.85 Aligned_cols=521 Identities=22% Similarity=0.193 Sum_probs=444.1
Q ss_pred ccccCCCCCcCccccCccchhhhhh-cCCcccCCCcccCCCccccEEecCCCcccccC-CcCccCCCCCcEEEcCCCcCC
Q 002155 2 LSFNALSGSLPEELSDLPILTFAAE-KNQLSGSLPSWLGNWNQMESLLLSSNQFIGKI-PPEIGNCSMLKSISLSNNFLS 79 (959)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~Ls~n~l~ 79 (959)
.|+++++ .+|. ..+.++.++. +|++.+..|..|+++++|++|+|++|...+.+ |..|+++++|++|+|++|.++
T Consensus 11 cs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~ 86 (844)
T 3j0a_A 11 YRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIY 86 (844)
T ss_dssp ESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCC
T ss_pred ccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCc
Confidence 4788999 9998 3455655554 46666777899999999999999999776666 788999999999999999999
Q ss_pred CCCCcccCCCCCCcEEEccCccccccCCc--ccccCCCCceeeecccccccccC-cccCCC-cccEEeccCCccccccCc
Q 002155 80 GSIPRELCTSESLEEIDLDGNLLTGTIEG--VFEKCSNLSQLVIFRNHIYGSIP-EYLSKL-PLMVLDLDSNNFTGIIPV 155 (959)
Q Consensus 80 ~~~p~~~~~l~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~n~~~~~~p-~~~~~~-~L~~L~ls~n~l~~~~p~ 155 (959)
+..|..|..+++|++|+|++|.+++..+. .|.++++|++|+|++|.+.+..+ ..+..+ +|++|++++|++++..|.
T Consensus 87 ~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~ 166 (844)
T 3j0a_A 87 FLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEH 166 (844)
T ss_dssp EECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSG
T ss_pred ccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHH
Confidence 88899999999999999999999986554 49999999999999999988765 466666 599999999999999999
Q ss_pred ccccc--cceeEEEccccccccccCccccCCcC------CceEeccCCcccccCCccccCC---CCCCEEEccC------
Q 002155 156 SIWNS--ETLMEFSAANNLLEGSLPYEVGNAAA------LERLVLTNNMLKGHLPKEIGNL---SALSVLDLNS------ 218 (959)
Q Consensus 156 ~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~------L~~L~L~~n~i~~~~~~~~~~l---~~L~~L~L~~------ 218 (959)
.+..+ ++|+.|++++|.+.+..|..++.+.+ |+.|+|++|.+++..+..+... .+++.|.++.
T Consensus 167 ~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~ 246 (844)
T 3j0a_A 167 ELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAG 246 (844)
T ss_dssp GGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCS
T ss_pred HcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccc
Confidence 99888 89999999999999988888887776 9999999999998888877654 6788888873
Q ss_pred ---CcCCccCCccccCC--CCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccc
Q 002155 219 ---NLFDGIIPYELGDC--ISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293 (959)
Q Consensus 219 ---N~i~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~ 293 (959)
|.+....+..|.++ ++|++|+|++|.+.+..+..|..+++|+.|+|++|++++..|. .+..++
T Consensus 247 ~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~------------~~~~l~ 314 (844)
T 3j0a_A 247 FGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADE------------AFYGLD 314 (844)
T ss_dssp SSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTT------------TTTTCS
T ss_pred ccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChH------------HhcCCC
Confidence 34444445556665 6899999999999988899999999999999999999854442 345677
Q ss_pred cccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEee
Q 002155 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLG 373 (959)
Q Consensus 294 ~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 373 (959)
+|+.|++++|.+++..|..+..+++|+.|++++|+++...+..|..+++|++|++++|.+++. ..+++|+.|+++
T Consensus 315 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~ 389 (844)
T 3j0a_A 315 NLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLS 389 (844)
T ss_dssp SCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEE
T ss_pred CCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccC
Confidence 899999999999999999999999999999999999999999999999999999999999853 237899999999
Q ss_pred CcccCCccccccccCCCCcEEEccCCcCCCCCC-CccCCcccccccccCCccccCCCch-hhhcccccceEeeccccccC
Q 002155 374 NNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVP-TSFGNLKELTHLDLSFNELDGQLPS-SLSNILNLVGLYLQHNKLSG 451 (959)
Q Consensus 374 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~L~~N~l~~ 451 (959)
+|+++ .+|.. ..+++.|++++|++++... ..+.++++|++|+|++|++++..+. .+..+++|+.|++++|.++.
T Consensus 390 ~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~ 465 (844)
T 3j0a_A 390 GNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQL 465 (844)
T ss_dssp SCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSS
T ss_pred CCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCcccc
Confidence 99998 45543 4679999999999996532 2356899999999999999865443 46678999999999999974
Q ss_pred C-----ccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCC
Q 002155 452 P-----VDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQ 526 (959)
Q Consensus 452 ~-----~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 526 (959)
. .+..|..+. +++.|+|++|.+++..|..|.++++|+.|+|++|++++..|..+. ++|++|+|++|+|++.
T Consensus 466 ~~~~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~ 541 (844)
T 3j0a_A 466 AWETELCWDVFEGLS--HLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAP 541 (844)
T ss_dssp SCCSCCCSSCSSCBC--CEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCC
T ss_pred ccccccchhhhcCcc--cccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCC
Confidence 4 345566554 799999999999999999999999999999999999976666665 8999999999999999
Q ss_pred CCccccCCCCccEEecccCcCcccCCCC
Q 002155 527 IPETMCSLSNLLYLSLAENRLEGMVPRS 554 (959)
Q Consensus 527 ~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 554 (959)
.|..| .+|+.|++++|++.+..+..
T Consensus 542 ~~~~~---~~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 542 NPDVF---VSLSVLDITHNKFICECELS 566 (844)
T ss_dssp CSCCC---SSCCEEEEEEECCCCSSSCC
T ss_pred ChhHh---CCcCEEEecCCCcccccccH
Confidence 88775 47899999999999876643
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-50 Score=481.36 Aligned_cols=511 Identities=24% Similarity=0.244 Sum_probs=382.3
Q ss_pred EEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccc
Q 002155 46 SLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNH 125 (959)
Q Consensus 46 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 125 (959)
.++-++.++. .+|..+. +++++|+|++|++++..+.+|.++++|++|+|++|+++++.++.|.++++|++|+|++|.
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 87 (570)
T 2z63_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (570)
T ss_dssp EEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCc
Confidence 3444444444 4454332 345555555555555445555555556666666555555555555555666666666655
Q ss_pred cccccCcccCCC-cccEEeccCCccccccCcccccccceeEEEcccccccc-ccCccccCCcCCceEeccCCcccccCCc
Q 002155 126 IYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEG-SLPYEVGNAAALERLVLTNNMLKGHLPK 203 (959)
Q Consensus 126 ~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~ 203 (959)
+.+..|..+..+ +|++|++++|++++..+..++++++|++|++++|.+++ .+|..|+++++|++|++++|++++..+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~ 167 (570)
T 2z63_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (570)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGG
T ss_pred CCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHH
Confidence 555555555544 36666666666665555566777777777777777765 3577788888888888888888877777
Q ss_pred cccCCCCC----CEEEccCCcCCccCCccccCCCCCCEEEcccccCC-CCCchhhhcccCCCeeEcccccCCCCCCCCCc
Q 002155 204 EIGNLSAL----SVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLS-GLIPEKIADLAQLQCLVLSHNNLSGPIPSKPS 278 (959)
Q Consensus 204 ~~~~l~~L----~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 278 (959)
.++.+++| +.|++++|.++++.|..+..+ +|++|++++|... ...+..+..+++++.+.+..+.+..... .
T Consensus 168 ~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~--l- 243 (570)
T 2z63_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGN--L- 243 (570)
T ss_dssp GGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSS--C-
T ss_pred HccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchh--h-
Confidence 77777777 788888888887777777665 6888888887543 2345667777777777766544331100 0
Q ss_pred chhhccCCCCccccccccceecCCC-cCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCC
Q 002155 279 SYFRQANMPDLSFIQHHGVFDLSYN-RLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPI 357 (959)
Q Consensus 279 ~~~~~~~~~~l~~l~~L~~l~L~~n-~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 357 (959)
..+....+..+..+ .+..++++++ .+.+..|..+..+++|+.|++.+|.++ .+|..+..+ +|++|++++|.+.. .
T Consensus 244 ~~~~~~~~~~l~~l-~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~-l 319 (570)
T 2z63_A 244 EKFDKSALEGLCNL-TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQ-F 319 (570)
T ss_dssp EECCTTTTGGGGGS-EEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSS-C
T ss_pred hhcchhhhcccccc-chhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccc-c
Confidence 00000111112222 2455777777 777888999999999999999999998 577788888 99999999999984 4
Q ss_pred CCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCC--CCccCCcccccccccCCccccCCCchhhhc
Q 002155 358 PSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKV--PTSFGNLKELTHLDLSFNELDGQLPSSLSN 435 (959)
Q Consensus 358 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 435 (959)
|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|++++.. +..+.++++|++|++++|.+.+. +..+..
T Consensus 320 ~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~ 394 (570)
T 2z63_A 320 PT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-SSNFLG 394 (570)
T ss_dssp CB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-EEEEET
T ss_pred Cc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccc-cccccc
Confidence 43 4678999999999998866554 78899999999999998654 67788999999999999999854 444999
Q ss_pred ccccceEeeccccccCCcc-ccccchhhhhhceeccCCcccCCCCCccccCccccceeeecccccc-ccCCcCCcCCCCC
Q 002155 436 ILNLVGLYLQHNKLSGPVD-ELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFT-GEIPPDLGNLMQL 513 (959)
Q Consensus 436 l~~L~~L~L~~N~l~~~~~-~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L 513 (959)
+++|+.|++++|++++.++ ..|.... +++.|++++|.+.+..|..|.++++|++|+|++|+++ +.+|..+..+++|
T Consensus 395 l~~L~~L~l~~n~l~~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L 472 (570)
T 2z63_A 395 LEQLEHLDFQHSNLKQMSEFSVFLSLR--NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL 472 (570)
T ss_dssp CTTCCEEECTTSEEESCTTSCTTTTCT--TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC
T ss_pred cCCCCEEEccCCccccccchhhhhcCC--CCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCC
Confidence 9999999999999988765 4565554 7999999999999999999999999999999999998 5789999999999
Q ss_pred cEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCC-cccCCCccccccCCCCCCCC
Q 002155 514 EYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS-GICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 514 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~~ 574 (959)
++|++++|++++..|..+..+++|++|++++|++++.++.. ..+.+|+.+++.+|++.|+|
T Consensus 473 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 473 TFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 99999999999988999999999999999999999998864 56889999999999999965
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-52 Score=446.73 Aligned_cols=259 Identities=27% Similarity=0.473 Sum_probs=213.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++|+|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 56778899999999999999864 477899999987777777889999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhc---------CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEE
Q 002155 753 VYEYMVNGSLDLWLRNRT---------GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~---------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 823 (959)
|||||++|+|.++++... .....++|.++..|+.||++||+||| +++||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999998642 22346899999999999999999999 789999999999999999999999
Q ss_pred cccccccccccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHH
Q 002155 824 ADFGLARLISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
+|||+|+......... .....||++|||||++.+..|+.++|||||||++|||+| |+.||..... ..+..
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--------~~~~~ 241 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--------NEVIE 241 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHHHH
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHH
Confidence 9999998764433222 233468999999999999999999999999999999999 8999864321 12233
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+..+.... .+..++..+.+++.+||+.||++||||+||.+.|+++.
T Consensus 242 ~i~~~~~~~---------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 242 CITQGRVLQ---------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp HHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHcCCCCC---------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 333332111 11223456889999999999999999999999999874
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-51 Score=447.20 Aligned_cols=259 Identities=29% Similarity=0.465 Sum_probs=207.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
++|.+.++||+|+||+||+|+++ +++.||||+++.......++|.+|++++++++|||||+++|+|.+++..|+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45677889999999999999864 478899999987777777889999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCC-----------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcE
Q 002155 753 VYEYMVNGSLDLWLRNRTGS-----------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEA 821 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 821 (959)
|||||++|+|.++++..... ..+++|.++..|+.||++||+||| +++||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 99999999999999865321 236899999999999999999999 7899999999999999999999
Q ss_pred EEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHH
Q 002155 822 KVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWV 899 (959)
Q Consensus 822 kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 899 (959)
||+|||+++........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||..... ..+
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~--------~~~ 269 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--------TEA 269 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH--------HHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH--------HHH
Confidence 99999999876433222 2334579999999999999999999999999999999999 8999864321 112
Q ss_pred HHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 900 FQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
...+..+.. +.. +..+...+.+++.+||+.||++||||+||+++|+.+.
T Consensus 270 ~~~i~~g~~-----~~~----p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 270 IDCITQGRE-----LER----PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp HHHHHHTCC-----CCC----CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHHHcCCC-----CCC----cccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 233333221 111 1123356889999999999999999999999999874
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-50 Score=476.74 Aligned_cols=505 Identities=19% Similarity=0.169 Sum_probs=409.9
Q ss_pred cCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccC
Q 002155 27 KNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTI 106 (959)
Q Consensus 27 ~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 106 (959)
.+.-...+|..+. +.+++|+|++|++.+..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++.+
T Consensus 15 ~~~~l~~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 92 (570)
T 2z63_A 15 MELNFYKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 92 (570)
T ss_dssp CSSCCSSCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEEC
T ss_pred CCCCccccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccC
Confidence 3444556777654 46889999999998777778999999999999999998777888999999999999999999888
Q ss_pred CcccccCCCCceeeecccccccccCcccCCC-cccEEeccCCccccc-cCcccccccceeEEEccccccccccCccccCC
Q 002155 107 EGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGI-IPVSIWNSETLMEFSAANNLLEGSLPYEVGNA 184 (959)
Q Consensus 107 ~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~-~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 184 (959)
+..|.++++|++|++++|.+.+..+..+..+ +|++|++++|++++. +|..+.++++|++|++++|.+++..+..|+.+
T Consensus 93 ~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 172 (570)
T 2z63_A 93 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVL 172 (570)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHH
T ss_pred HhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccch
Confidence 8899999999999999999887766566666 599999999999874 68889999999999999999998888888888
Q ss_pred cCC----ceEeccCCcccccCCccccCCCCCCEEEccCCcCC-ccCCccccCCCCCCEEEcccccC------CCCCchhh
Q 002155 185 AAL----ERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFD-GIIPYELGDCISLTTLDLGNNNL------SGLIPEKI 253 (959)
Q Consensus 185 ~~L----~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~N~l------~~~~~~~~ 253 (959)
++| +.|++++|.+++..+..|..+ +|+.|++++|... ...+..+..+++++.+.+..+.+ .......+
T Consensus 173 ~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~ 251 (570)
T 2z63_A 173 HQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSAL 251 (570)
T ss_dssp HTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTT
T ss_pred hccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhh
Confidence 888 899999999998877777766 7999999988543 23455667777777766654322 22223334
Q ss_pred hcccC--CCeeEcccc-cCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCc
Q 002155 254 ADLAQ--LQCLVLSHN-NLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLS 330 (959)
Q Consensus 254 ~~l~~--L~~L~Ls~N-~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~ 330 (959)
..+.+ ++.+++++| .+.+..| ..+..+.+|+.|++++|.+. .+|..+..+ +|+.|++.+|.++
T Consensus 252 ~~l~~l~l~~l~l~~~~~~~~~~~------------~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~ 317 (570)
T 2z63_A 252 EGLCNLTIEEFRLAYLDYYLDDII------------DLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG 317 (570)
T ss_dssp GGGGGSEEEEEEEEETTEEESCST------------TTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS
T ss_pred ccccccchhhhhhhcchhhhhhch------------hhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc
Confidence 44443 455666665 4433322 23455677788888888887 577778888 8999999999988
Q ss_pred ccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCcc--ccccccCCCCcEEEccCCcCCCCCCCc
Q 002155 331 GKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSI--PWSLGSLGGLVKLNLTGNKLSGKVPTS 408 (959)
Q Consensus 331 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~N~i~~~~~~~ 408 (959)
. +|. ..+++|++|++++|.+.+..+. ..+++|+.|++++|.+++.. +..+..+++|++|++++|.+.+..+ .
T Consensus 318 ~-l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~ 391 (570)
T 2z63_A 318 Q-FPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-N 391 (570)
T ss_dssp S-CCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-E
T ss_pred c-cCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-c
Confidence 4 443 4778899999999988865554 67889999999999988554 6778888999999999999885544 4
Q ss_pred cCCcccccccccCCccccCCCc-hhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccC-CCCCccccCc
Q 002155 409 FGNLKELTHLDLSFNELDGQLP-SSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFD-GGLPRSLGNL 486 (959)
Q Consensus 409 ~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~-~~~p~~~~~l 486 (959)
+.++++|++|++++|.+.+..+ ..+..+++|+.|++++|++++..+..|.... .++.|++++|.++ +.+|..|..+
T Consensus 392 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~p~~~~~l 469 (570)
T 2z63_A 392 FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS--SLEVLKMAGNSFQENFLPDIFTEL 469 (570)
T ss_dssp EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCT--TCCEEECTTCEEGGGEECSCCTTC
T ss_pred ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCC--cCcEEECcCCcCccccchhhhhcc
Confidence 8889999999999999987655 5788899999999999999888887777665 7889999999987 5789999999
Q ss_pred cccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcc
Q 002155 487 SYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGI 556 (959)
Q Consensus 487 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 556 (959)
++|++|+|++|++++..|..+..+++|++|++++|++++..|..+..+++|+.|++++|++++.+|....
T Consensus 470 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~ 539 (570)
T 2z63_A 470 RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 539 (570)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHH
T ss_pred cCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHH
Confidence 9999999999999988899999999999999999999998888999999999999999999998887543
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-51 Score=441.08 Aligned_cols=257 Identities=23% Similarity=0.380 Sum_probs=210.3
Q ss_pred CCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
++++.+.||+|+||+||+|++. +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 4556788999999999999863 46789999997543 3445789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCC------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc
Q 002155 753 VYEYMVNGSLDLWLRNRTGS------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE 820 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 820 (959)
|||||++|+|.+++...... ...++|.++..|+.|||+||+||| +.+||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCC
Confidence 99999999999999764321 235899999999999999999999 889999999999999999999
Q ss_pred EEEcccccccccccccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHH
Q 002155 821 AKVADFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGW 898 (959)
Q Consensus 821 ~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 898 (959)
+||+|||+++.....+. .......||++|||||++.++.|+.++|||||||++|||+| |..||..... ..
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--------~~ 255 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--------QD 255 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--------HH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--------HH
Confidence 99999999987654332 22345679999999999999999999999999999999999 8999864321 12
Q ss_pred HHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 899 VFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
+...+..+.... .+.+++..+.+++.+||+.||++||||+||+++|+.+
T Consensus 256 ~~~~i~~~~~~~---------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 256 VVEMIRNRQVLP---------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHcCCCCC---------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 233333332111 1223445688999999999999999999999999875
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-49 Score=471.11 Aligned_cols=478 Identities=20% Similarity=0.180 Sum_probs=333.8
Q ss_pred cCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccC
Q 002155 27 KNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTI 106 (959)
Q Consensus 27 ~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 106 (959)
+++-.+.+|+.+. +.|++|+|++|++.+..|.+|.++++|++|+|++|++++..|..|..+++|++|+|++|++++.+
T Consensus 13 ~~~~l~~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 90 (549)
T 2z81_A 13 RSRSFTSIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLS 90 (549)
T ss_dssp TTSCCSSCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCC
T ss_pred CCCccccccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccC
Confidence 3445557887665 68999999999999878889999999999999999999888889999999999999999999888
Q ss_pred CcccccCCCCceeeecccccccc-cCcccCCC-cccEEeccCCc-cccccCcccccccceeEEEccccccccccCccccC
Q 002155 107 EGVFEKCSNLSQLVIFRNHIYGS-IPEYLSKL-PLMVLDLDSNN-FTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGN 183 (959)
Q Consensus 107 ~~~~~~l~~L~~L~L~~n~~~~~-~p~~~~~~-~L~~L~ls~n~-l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 183 (959)
+..|+++++|++|++++|.+.+. .|..+..+ +|++|++++|+ +..+.+..+.++++|++|++++|.+++..|..++.
T Consensus 91 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 170 (549)
T 2z81_A 91 SSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS 170 (549)
T ss_dssp HHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT
T ss_pred HHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhc
Confidence 88899999999999999999863 55666666 59999999998 44444568999999999999999999889999999
Q ss_pred CcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccC--C-ccccCCCCCCEEEcccccCCCCCchh----hhcc
Q 002155 184 AAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGII--P-YELGDCISLTTLDLGNNNLSGLIPEK----IADL 256 (959)
Q Consensus 184 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~--~-~~~~~l~~L~~L~L~~N~l~~~~~~~----~~~l 256 (959)
+++|++|++++|.+.......+..+++|++|++++|.+++.. | .....+++|+.|++++|++++..+.. +..+
T Consensus 171 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~ 250 (549)
T 2z81_A 171 IRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYI 250 (549)
T ss_dssp CSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGC
T ss_pred cccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhh
Confidence 999999999999988433333467899999999999998642 2 23345788999999999987654443 4667
Q ss_pred cCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCccc----
Q 002155 257 AQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGK---- 332 (959)
Q Consensus 257 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~---- 332 (959)
++|+.|++++|.+.+...- . ...... +..+.+++.|.+.++.+...
T Consensus 251 ~~L~~l~l~~~~~~~~~~~-~-----~~~~~~------------------------~~~l~~L~~L~l~~~~i~~~~~~~ 300 (549)
T 2z81_A 251 LELSEVEFDDCTLNGLGDF-N-----PSESDV------------------------VSELGKVETVTIRRLHIPQFYLFY 300 (549)
T ss_dssp TTCCEEEEESCEEECCSCC-C-----CCTTTC------------------------CCCCTTCCEEEEESCBCSCGGGSC
T ss_pred ccccccccccccccccccc-c-----ccchhh------------------------hhhhcccccccccccccchhhhcc
Confidence 8899999999987642110 0 001111 22333444444444443321
Q ss_pred -CCccccCCCCCCEEEccCCCCCCCCCCCc-CCCCcceEEEeeCcccCCccc---cccccCCCCcEEEccCCcCCCCCC-
Q 002155 333 -IPGSLSRLTNLTTLDLSRNQLTGPIPSEF-GDSIKLQGLYLGNNQLTGSIP---WSLGSLGGLVKLNLTGNKLSGKVP- 406 (959)
Q Consensus 333 -~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~L~~N~i~~~~~- 406 (959)
.+..+...++|+.|++++|++. .+|..+ ..+++|+.|++++|++++..| ..+..+++|++|++++|++++..+
T Consensus 301 ~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 379 (549)
T 2z81_A 301 DLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKT 379 (549)
T ss_dssp CCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHH
T ss_pred cchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccc
Confidence 1222344566777777777776 344433 456777777777777765543 235667777777777777764432
Q ss_pred -CccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccC
Q 002155 407 -TSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGN 485 (959)
Q Consensus 407 -~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~ 485 (959)
..+..+++|++|++++|+++ .+|..+..+++|+.|++++|+++.++...+
T Consensus 380 ~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~---------------------------- 430 (549)
T 2z81_A 380 GEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCIP---------------------------- 430 (549)
T ss_dssp HHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTSC----------------------------
T ss_pred hhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchhc----------------------------
Confidence 34667777777777777777 566667777777777777777765443221
Q ss_pred ccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCC-cccCCCcccc
Q 002155 486 LSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS-GICQNLSKIS 564 (959)
Q Consensus 486 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~ 564 (959)
++|++|+|++|++++.+ ..+++|++|+|++|+|+ .+|. ...+++|++|+|++|++++.+|.. ..+.+|+.++
T Consensus 431 -~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 503 (549)
T 2z81_A 431 -QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIW 503 (549)
T ss_dssp -TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEE
T ss_pred -CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEE
Confidence 34555555555555321 34555666666666665 3343 345556666666666666655542 4455666666
Q ss_pred ccCCCCCCC
Q 002155 565 LTGNKDLCG 573 (959)
Q Consensus 565 l~~N~~~c~ 573 (959)
+++|+|.|+
T Consensus 504 l~~N~~~~~ 512 (549)
T 2z81_A 504 LHTNPWDCS 512 (549)
T ss_dssp CCSSCBCCC
T ss_pred ecCCCccCC
Confidence 666666664
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-50 Score=432.70 Aligned_cols=258 Identities=29% Similarity=0.458 Sum_probs=203.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|++.++||+|+||+||+|+++ ..||||+++.. .....+.|.+|++++++++|||||++++++.. +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 46777889999999999999975 36999998643 34456779999999999999999999998864 578999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
|++|+|.++++... ..+++.++..|+.|||+||+||| +++||||||||+|||+++++.+||+|||+|+......
T Consensus 113 ~~gGsL~~~l~~~~---~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 113 CEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp CSSCBHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred CCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence 99999999997654 35899999999999999999999 7899999999999999999999999999998764322
Q ss_pred -ccccccccccccccCCCcCCC---CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 837 -THVSTDIAGTFGYIPPEYGQS---GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 837 -~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
.......+||+.|||||++.+ .+|+.++|||||||++|||+||+.||..... ...+...+..+..
T Consensus 187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~-------~~~~~~~~~~~~~---- 255 (307)
T 3omv_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN-------RDQIIFMVGRGYA---- 255 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-------HHHHHHHHHTTCC----
T ss_pred cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh-------HHHHHHHHhcCCC----
Confidence 223345689999999998753 4689999999999999999999999964321 1122223322211
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.|. .+....++...+.+++.+||+.||++||||+||+++|+.++
T Consensus 256 ~p~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 256 SPD-LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp CCC-STTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred CCC-cccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 111 11122334457889999999999999999999999999875
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-50 Score=436.94 Aligned_cols=250 Identities=24% Similarity=0.354 Sum_probs=209.8
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
+.|+..+.||+|+||+||+|+++ +|+.||||++........+.+.+|++++++++|||||+++++|.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 56888999999999999999875 69999999997665555667889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
+||+|.+++... .+++.++..++.||+.||+||| ++|||||||||+|||++.++++||+|||+|+......
T Consensus 154 ~gg~L~~~l~~~-----~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~- 224 (346)
T 4fih_A 154 EGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV- 224 (346)
T ss_dssp TTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-
T ss_pred CCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC-
Confidence 999999999763 3899999999999999999999 8999999999999999999999999999998765422
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......+||+.|||||++.+..|+.++||||+||++|||++|++||..... .. +...+........
T Consensus 225 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~-~~~~i~~~~~~~~------ 290 (346)
T 4fih_A 225 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------LK-AMKMIRDNLPPRL------ 290 (346)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HH-HHHHHHHSSCCCC------
T ss_pred CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HH-HHHHHHcCCCCCC------
Confidence 234557899999999999999999999999999999999999999964311 11 2222222211111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.........+.+++.+||+.||++|||++|++++
T Consensus 291 -~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 291 -KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp -SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1112234567889999999999999999999874
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-50 Score=436.99 Aligned_cols=251 Identities=24% Similarity=0.405 Sum_probs=202.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
++|++.+.||+|+||+||+|+++ +|+.||||++... .....+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 68999999999999999999865 6999999998654 33446678999999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
||+||+|.+++..... ..+++.+++.|+.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~~--~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKG--VLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHcCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 9999999999976542 35788999999999999999999 899999999999999999999999999999876432
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
.......+||+.|||||++.+..|+.++||||+||++|||+||++||.... ..+.+ ..+..+.. +.
T Consensus 179 -~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-------~~~~~-~~i~~~~~-----~~ 244 (350)
T 4b9d_A 179 -VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-------MKNLV-LKIISGSF-----PP 244 (350)
T ss_dssp -HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-------HHHHH-HHHHHTCC-----CC
T ss_pred -cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-------HHHHH-HHHHcCCC-----CC
Confidence 122344679999999999999999999999999999999999999996431 12222 22222211 11
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ...+...+.+++.+||++||++|||++|++++
T Consensus 245 ~----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 245 V----SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp C----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred C----CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 12233467889999999999999999999864
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-50 Score=431.56 Aligned_cols=251 Identities=22% Similarity=0.279 Sum_probs=204.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
+.|+..++||+|+||+||+|+++ +|+.||||+++.... ..+|+.+++.++|||||++++++.+++..|+|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 56778889999999999999975 689999999975432 246999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC-cEEEccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF-EAKVADFGLARLISACE 836 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~~~~~ 836 (959)
+||+|.++++... .+++.++..++.||+.||+||| ++|||||||||+|||++.+| ++||+|||+|+......
T Consensus 133 ~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 133 EGGSLGQLIKQMG----CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp TTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred CCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence 9999999998764 5899999999999999999999 89999999999999999987 69999999998765322
Q ss_pred cc----ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 837 TH----VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 837 ~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
.. .....+||+.|||||++.+..|+.++||||+||++|||+||++||...... .+...+ ......
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~----~~~~~i----~~~~~~--- 274 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG----PLCLKI----ASEPPP--- 274 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS----CCHHHH----HHSCCG---
T ss_pred cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH----HHHHHH----HcCCCC---
Confidence 11 123357999999999999999999999999999999999999999653222 222222 111110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
....+..+...+.+++.+||++||++|||+.|++++|.+.
T Consensus 275 ----~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 275 ----IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp ----GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 0011122345678899999999999999999999998765
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-49 Score=438.68 Aligned_cols=250 Identities=24% Similarity=0.354 Sum_probs=209.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
+.|+..+.||+|+||+||+|+++ +|+.||||++........+.+.+|+.+|+.++|||||+++++|.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56999999999999999999975 69999999997665555667889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
+||+|.++++.. .+++.++..|+.||+.||+||| ++|||||||||+|||++.+|.+||+|||+|+......
T Consensus 231 ~gG~L~~~i~~~-----~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~- 301 (423)
T 4fie_A 231 EGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV- 301 (423)
T ss_dssp TTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-
T ss_pred CCCcHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC-
Confidence 999999999754 3899999999999999999999 8999999999999999999999999999998765432
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......+||+.|||||++.+..|+.++||||+||++|||++|++||..... .. +...+........
T Consensus 302 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~-~~~~i~~~~~~~~------ 367 (423)
T 4fie_A 302 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------LK-AMKMIRDNLPPRL------ 367 (423)
T ss_dssp CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HH-HHHHHHHSCCCCC------
T ss_pred ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HH-HHHHHHcCCCCCC------
Confidence 234567899999999999999999999999999999999999999964321 11 2222222211111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.........+.+++.+||+.||++|||++|++++
T Consensus 368 -~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 368 -KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp -SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0111233467889999999999999999999874
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-49 Score=473.99 Aligned_cols=462 Identities=20% Similarity=0.271 Sum_probs=249.4
Q ss_pred cccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCC------C------CCCcccCCCCCCcEEEccCccccccCCccc
Q 002155 43 QMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLS------G------SIPRELCTSESLEEIDLDGNLLTGTIEGVF 110 (959)
Q Consensus 43 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~------~------~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~ 110 (959)
+++.|+|++|++.|.+|+++++|++|++|+|++|.+. + .+|... +..|+ +++++|.+.+.++..+
T Consensus 82 ~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~ 158 (636)
T 4eco_A 82 RVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDF 158 (636)
T ss_dssp CEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGS
T ss_pred CEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhH
Confidence 5666777777776677777777777777777776551 1 222222 33444 5555555554444333
Q ss_pred cc-CCCCceeeecccccccccCcccCCCcccE--EeccCCccccccCcccccccceeEEEccccccccc-----------
Q 002155 111 EK-CSNLSQLVIFRNHIYGSIPEYLSKLPLMV--LDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGS----------- 176 (959)
Q Consensus 111 ~~-l~~L~~L~L~~n~~~~~~p~~~~~~~L~~--L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~----------- 176 (959)
.. +..+..+++....+.. .....++. +....|++++ +|..++++++|++|++++|.+++.
T Consensus 159 ~~~~~~l~~~~l~~~~~~~-----~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~ 232 (636)
T 4eco_A 159 SDLIKDCINSDPQQKSIKK-----SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENS 232 (636)
T ss_dssp CHHHHHHHHHCTTSCCCCC-----CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTS
T ss_pred HHHHHHHhhcCcccccccc-----ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccccc
Confidence 31 1112222222111110 00111221 2223567776 677777777777777777777764
Q ss_pred ------cCcccc--CCcCCceEeccCCcccccCCccccCCCCCCEEEccCCc-CCc-cCCccccCC------CCCCEEEc
Q 002155 177 ------LPYEVG--NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNL-FDG-IIPYELGDC------ISLTTLDL 240 (959)
Q Consensus 177 ------~~~~~~--~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~-i~~-~~~~~~~~l------~~L~~L~L 240 (959)
+|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|. +++ .+|..++.+ ++|++|+|
T Consensus 233 ~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L 312 (636)
T 4eco_A 233 EYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYI 312 (636)
T ss_dssp HHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEEC
T ss_pred chhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEEC
Confidence 677766 77777777777777777777777777777777777776 666 566666665 67777777
Q ss_pred ccccCCCCCch--hhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCccc
Q 002155 241 GNNNLSGLIPE--KIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVV 318 (959)
Q Consensus 241 ~~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~ 318 (959)
++|+++ .+|. .|+.+++|++|++++|+++|.+| .+..+.+|+.|++++|.++ .+|..+..+++
T Consensus 313 ~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-------------~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~ 377 (636)
T 4eco_A 313 GYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-------------AFGSEIKLASLNLAYNQIT-EIPANFCGFTE 377 (636)
T ss_dssp CSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-------------CCEEEEEESEEECCSSEEE-ECCTTSEEECT
T ss_pred CCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-------------hhCCCCCCCEEECCCCccc-cccHhhhhhcc
Confidence 777777 4455 67777777777777776654333 1233444444555555544 44444444444
Q ss_pred -ccEEEccCCcCcccCCccccCCC--CCCEEEccCCCCCCCCCCCcC-------CCCcceEEEeeCcccCCccccccccC
Q 002155 319 -VVDLLLNNNMLSGKIPGSLSRLT--NLTTLDLSRNQLTGPIPSEFG-------DSIKLQGLYLGNNQLTGSIPWSLGSL 388 (959)
Q Consensus 319 -L~~L~L~~n~i~~~~~~~~~~l~--~L~~L~Ls~n~l~~~~~~~~~-------~l~~L~~L~L~~n~l~~~~~~~~~~l 388 (959)
|+.|++++|+++ .+|..+..++ +|++|++++|++.+..|..|. .+.+|+.|++++|+++...+..+..+
T Consensus 378 ~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l 456 (636)
T 4eco_A 378 QVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTG 456 (636)
T ss_dssp TCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTT
T ss_pred cCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccC
Confidence 444444444444 3333333322 444444444444444444444 33344444444444442222223334
Q ss_pred CCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccc-cchhhhhhce
Q 002155 389 GGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELF-SNSAAWKIAT 467 (959)
Q Consensus 389 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~-~~~~~~~l~~ 467 (959)
++|++|+|++|+++.+.+..+.... ..+.++++|+.|++++|+++.++..++ .... +|+.
T Consensus 457 ~~L~~L~Ls~N~l~~i~~~~~~~~~-----------------~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~l~--~L~~ 517 (636)
T 4eco_A 457 SPLSSINLMGNMLTEIPKNSLKDEN-----------------ENFKNTYLLTSIDLRFNKLTKLSDDFRATTLP--YLVG 517 (636)
T ss_dssp CCCSEEECCSSCCSBCCSSSSEETT-----------------EECTTGGGCCEEECCSSCCCBCCGGGSTTTCT--TCCE
T ss_pred CCCCEEECCCCCCCCcCHHHhcccc-----------------ccccccCCccEEECcCCcCCccChhhhhccCC--CcCE
Confidence 4444444444444422111221111 000011144444444444444333322 1111 3444
Q ss_pred eccCCcccCCCCCccccCccccceeee------ccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEe
Q 002155 468 MNMSNNLFDGGLPRSLGNLSYLTNLDL------HENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLS 541 (959)
Q Consensus 468 L~ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 541 (959)
|++++|.+++ +|..+.++++|+.|+| ++|++.+.+|..+..+++|++|+|++|+| +.+|..+. ++|+.|+
T Consensus 518 L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~ 593 (636)
T 4eco_A 518 IDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLD 593 (636)
T ss_dssp EECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEE
T ss_pred EECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEE
Confidence 4444444444 5566666777777777 45667777888888888888888888888 45666655 6788888
Q ss_pred cccCcCcccCC
Q 002155 542 LAENRLEGMVP 552 (959)
Q Consensus 542 l~~N~l~~~~~ 552 (959)
+++|++..+..
T Consensus 594 Ls~N~l~~~~~ 604 (636)
T 4eco_A 594 IKDNPNISIDL 604 (636)
T ss_dssp CCSCTTCEEEC
T ss_pred CcCCCCccccH
Confidence 88887776544
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-49 Score=464.65 Aligned_cols=454 Identities=20% Similarity=0.206 Sum_probs=274.5
Q ss_pred EecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeeccccc
Q 002155 47 LLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHI 126 (959)
Q Consensus 47 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~ 126 (959)
.+.+++++. .+|+.+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..+++|.++++|++|+|++|.+
T Consensus 10 c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 86 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHL 86 (549)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCcc
Confidence 466666666 6666543 6677777777777766666777777777777777777766666777777777776666666
Q ss_pred ccccCcccCCC-cccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCc-ccccCCcc
Q 002155 127 YGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNM-LKGHLPKE 204 (959)
Q Consensus 127 ~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~ 204 (959)
.+.+|..+..+ +|++|++++|++++. ..|..|+++++|++|++++|. +....+..
T Consensus 87 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~-----------------------~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~ 143 (549)
T 2z81_A 87 SSLSSSWFGPLSSLKYLNLMGNPYQTL-----------------------GVTSLFPNLTNLQTLRIGNVETFSEIRRID 143 (549)
T ss_dssp CSCCHHHHTTCTTCCEEECTTCCCSSS-----------------------CSSCSCTTCTTCCEEEEEESSSCCEECTTT
T ss_pred CccCHHHhccCCCCcEEECCCCccccc-----------------------chhhhhhccCCccEEECCCCccccccCHhh
Confidence 65555444443 355555555555432 233455556666666666665 33233345
Q ss_pred ccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhcc
Q 002155 205 IGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQA 284 (959)
Q Consensus 205 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 284 (959)
|.++++|++|++++|.+++..|..++.+++|++|++++|.+.......+..+++|++|++++|++++....
T Consensus 144 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--------- 214 (549)
T 2z81_A 144 FAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFS--------- 214 (549)
T ss_dssp TTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCC---------
T ss_pred hhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcccccccc---------
Confidence 66666666666666666666666666666666666666666543333334566666666666666532100
Q ss_pred CCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCC----ccccCCCCCCEEEccCCCCCCCC---
Q 002155 285 NMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIP----GSLSRLTNLTTLDLSRNQLTGPI--- 357 (959)
Q Consensus 285 ~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~----~~~~~l~~L~~L~Ls~n~l~~~~--- 357 (959)
..+. ...+++|+.|++.+|.+++..+ ..+..+++|+.|++++|.+.+..
T Consensus 215 ~~~~------------------------~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~ 270 (549)
T 2z81_A 215 PLPV------------------------DEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFN 270 (549)
T ss_dssp CCSS------------------------CCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCC
T ss_pred ccch------------------------hhhhhcccceeccccccchhHHHHHHHHhhhhcccccccccccccccccccc
Confidence 0000 0112233333333333332211 12233445555555555443211
Q ss_pred ---CCCcCCCCcceEEEeeCcccCCc-----cccccccCCCCcEEEccCCcCCCCCCCcc-CCcccccccccCCccccCC
Q 002155 358 ---PSEFGDSIKLQGLYLGNNQLTGS-----IPWSLGSLGGLVKLNLTGNKLSGKVPTSF-GNLKELTHLDLSFNELDGQ 428 (959)
Q Consensus 358 ---~~~~~~l~~L~~L~L~~n~l~~~-----~~~~~~~l~~L~~L~L~~N~i~~~~~~~~-~~l~~L~~L~L~~N~l~~~ 428 (959)
...+..+.+|+.|.+.++.+... .+..+...++|+.|++++|++. .+|..+ .++++|++|++++|++++.
T Consensus 271 ~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~ 349 (549)
T 2z81_A 271 PSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEE 349 (549)
T ss_dssp CCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHH
T ss_pred ccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccc
Confidence 12234455556666655554421 1111233456666666666666 344433 4566666666666666654
Q ss_pred Cch---hhhcccccceEeeccccccCCcc--ccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccC
Q 002155 429 LPS---SLSNILNLVGLYLQHNKLSGPVD--ELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEI 503 (959)
Q Consensus 429 ~~~---~l~~l~~L~~L~L~~N~l~~~~~--~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 503 (959)
.|. .+..+++|+.|++++|+++++++ ..|.... +++.|++++|.++ .+|..+..+++|++|+|++|+++ .+
T Consensus 350 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~--~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l 425 (549)
T 2z81_A 350 YLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLK--NLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VV 425 (549)
T ss_dssp HHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCT--TCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CC
T ss_pred cccchhhhhccccCcEEEccCCcccccccchhhhhcCC--CCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cc
Confidence 432 25566667777777776666543 3343333 5667777777776 56778888999999999999998 56
Q ss_pred CcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccCCCccccccCCCCC
Q 002155 504 PPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDL 571 (959)
Q Consensus 504 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~ 571 (959)
|..+. ++|++|+|++|+|++.+ ..+++|++|++++|+++.+++ ...+.+|+.+++++|...
T Consensus 426 ~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~~ip~-~~~l~~L~~L~Ls~N~l~ 486 (549)
T 2z81_A 426 KTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLKTLPD-ASLFPVLLVMKISRNQLK 486 (549)
T ss_dssp CTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSSCCC-GGGCTTCCEEECCSSCCC
T ss_pred cchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccCcCCC-cccCccCCEEecCCCccC
Confidence 65553 68999999999999753 578999999999999996654 567899999999999744
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=415.26 Aligned_cols=245 Identities=27% Similarity=0.412 Sum_probs=197.0
Q ss_pred CCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceec----CCceEEEE
Q 002155 682 CKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSF----DEEKLLVY 754 (959)
Q Consensus 682 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~ 754 (959)
++.++||+|+||+||+|++. +++.||+|++... .....+.|.+|++++++++|||||+++++|.. +...|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45678999999999999875 6889999998643 33445678999999999999999999999854 34579999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEECC-CCcEEEcccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH--IIHRDIKASNILLNE-EFEAKVADFGLARL 831 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~ 831 (959)
|||+||+|.++++... .+++..+..|+.||+.||+||| +++ ||||||||+|||++. ++.+||+|||+|+.
T Consensus 109 Ey~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence 9999999999998754 5899999999999999999999 677 999999999999974 78999999999976
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
... ......+||+.|||||++.+ +|+.++|||||||++|||+||++||..... ...+...+..+..
T Consensus 182 ~~~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-------~~~~~~~i~~~~~--- 247 (290)
T 3fpq_A 182 KRA---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIYRRVTSGVK--- 247 (290)
T ss_dssp CCT---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHHHHHTTTCC---
T ss_pred CCC---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-------HHHHHHHHHcCCC---
Confidence 432 23345689999999998865 699999999999999999999999954211 1223333333211
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
|...+.. ....+.+++.+||+.||++|||++|++++
T Consensus 248 --~~~~~~~---~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 248 --PASFDKV---AIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp --CGGGGGC---CCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --CCCCCcc---CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1111111 12357789999999999999999999874
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-50 Score=425.00 Aligned_cols=247 Identities=26% Similarity=0.362 Sum_probs=207.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.++||+|+||+||+|+.+ +|+.||||++.+. .....+.+.+|++++++++|||||+++++|.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 57999999999999999999865 6899999999753 2334567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
|||+||+|.++++... .+++.++..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~~~~----~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 9999999999998764 5899999999999999999999 89999999999999999999999999999987754
Q ss_pred ccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
... ......+||+.|||||++.+..|+.++||||+||++|||++|++||..... ..+...+...... .
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--------~~~~~~i~~~~~~---~ 253 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--------GLIFAKIIKLEYD---F 253 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCC---C
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCC---C
Confidence 322 234567899999999999999999999999999999999999999964321 1122333322211 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVL 950 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell 950 (959)
| ......+.+++.+|+++||++|||++|++
T Consensus 254 p-------~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 254 P-------EKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp C-------TTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred C-------cccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 1 11234578899999999999999999863
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-49 Score=426.60 Aligned_cols=269 Identities=27% Similarity=0.350 Sum_probs=203.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCC----ceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE----EKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv~ 754 (959)
.+|.+.++||+|+||+||+|++ +|+.||||++...... ...+..|+..+.+++|||||+++++|.+++ ..|+||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 3567788999999999999998 5899999998754322 222345677778899999999999997654 579999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG-----FTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
|||++|+|.++++.. .++|..+.+++.|+++||+|||+. +.++||||||||+|||++.++++||+|||+|
T Consensus 81 Ey~~~gsL~~~l~~~-----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp ECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCCCCCcHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 999999999999864 389999999999999999999932 1239999999999999999999999999999
Q ss_pred cccccccccc---cccccccccccCCCcCCCC------CCCCcCcchhHHHHHHHHHhCCCCCCCCCcccc-------CC
Q 002155 830 RLISACETHV---STDIAGTFGYIPPEYGQSG------RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIE-------GG 893 (959)
Q Consensus 830 ~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg~~p~~~~~~~~~-------~~ 893 (959)
+......... ....+||+.|||||++.+. .++.++|||||||++|||+||.+||........ ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 8765433221 2345799999999988654 367799999999999999999988754322110 01
Q ss_pred chHHHHHHHhhcCccccccCccccC-CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 894 NLVGWVFQKMKKGQAADVLDPTVLT-ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.....+...+.. ...+|.... ....+....+.+++.+||+.||++||||+||++.|+++..
T Consensus 236 ~~~~~~~~~~~~----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 236 PSVEEMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CCHHHHHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhc----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 111222222221 122332221 1234566788999999999999999999999999999864
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-49 Score=412.51 Aligned_cols=246 Identities=24% Similarity=0.374 Sum_probs=191.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||+||+|+++ +|+.||||++.+.. ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999875 69999999986532 333567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+ +|+|.+++.... .+++.++..++.||+.||+||| ++||+||||||+|||++.++++||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~~~~----~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHHSC----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 679999997654 5899999999999999999999 89999999999999999999999999999987643
Q ss_pred ccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
. ......+||+.|||||++.+..+ +.++||||+||++|||+||+.||.... .. .+.+.+..+... .
T Consensus 165 ~--~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-------~~-~~~~~i~~~~~~---~ 231 (275)
T 3hyh_A 165 G--NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-------IP-VLFKNISNGVYT---L 231 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HH-HHHHHHHHTCCC---C
T ss_pred C--CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-------HH-HHHHHHHcCCCC---C
Confidence 2 23345689999999999988876 579999999999999999999996431 11 222333322111 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
| ......+.+++.+||+.||++|||++|++++
T Consensus 232 p-------~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 232 P-------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp C-------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred C-------CCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1 1123467789999999999999999999874
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=466.49 Aligned_cols=218 Identities=18% Similarity=0.188 Sum_probs=127.0
Q ss_pred ccccEEecCCCcccccCCcCccCCCCCcEEEc-CCCcCCCCCCccc----------------------------------
Q 002155 42 NQMESLLLSSNQFIGKIPPEIGNCSMLKSISL-SNNFLSGSIPREL---------------------------------- 86 (959)
Q Consensus 42 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L-s~n~l~~~~p~~~---------------------------------- 86 (959)
.+++.|+|++|++.|.+|++|++|++|++|+| ++|.++|..|-..
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57889999999999999999999999999999 8888776533211
Q ss_pred -----------------CCCCCCcEEEccC--ccccccCCcccccCCCCceeeecccccccc-cCcccCCCcccEEeccC
Q 002155 87 -----------------CTSESLEEIDLDG--NLLTGTIEGVFEKCSNLSQLVIFRNHIYGS-IPEYLSKLPLMVLDLDS 146 (959)
Q Consensus 87 -----------------~~l~~L~~L~L~~--n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~-~p~~~~~~~L~~L~ls~ 146 (959)
.....++.+.++. |++++ +|..|+++++|++|+|++|.+.+. +|..+. ..+.
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~-------~~s~ 474 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWE-------DANS 474 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCS-------CTTS
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCccccccc-------cccc
Confidence 1111222233332 56665 555666666666666666666651 110000 0111
Q ss_pred CccccccCcccc--cccceeEEEccccccccccCccccCCcCCceEeccCCc-ccc-cCCccccCCC-------CCCEEE
Q 002155 147 NNFTGIIPVSIW--NSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNM-LKG-HLPKEIGNLS-------ALSVLD 215 (959)
Q Consensus 147 n~l~~~~p~~~~--~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~-i~~-~~~~~~~~l~-------~L~~L~ 215 (959)
|.+.+.+|..++ ++++|+.|++++|.+.+.+|..|+++++|+.|+|++|+ +++ .+|..|++++ +|++|+
T Consensus 475 n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~ 554 (876)
T 4ecn_A 475 DYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFY 554 (876)
T ss_dssp HHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEE
T ss_pred ccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEE
Confidence 222223555544 55666666666665555556556666666666666665 554 4555444433 666666
Q ss_pred ccCCcCCccCCc--cccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCC
Q 002155 216 LNSNLFDGIIPY--ELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 216 L~~N~i~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
|++|.++ .+|. .++++++|++|+|++|+++ .+| .|+.+++|+.|+|++|+++
T Consensus 555 Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~ 608 (876)
T 4ecn_A 555 MGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE 608 (876)
T ss_dssp CCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS
T ss_pred eeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc
Confidence 6666665 4555 5566666666666666665 334 5555666666666555554
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-48 Score=464.44 Aligned_cols=454 Identities=19% Similarity=0.249 Sum_probs=349.2
Q ss_pred CCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCcccc------c------cCCcccccCCCCceeeecccccccccCcc
Q 002155 66 SMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLT------G------TIEGVFEKCSNLSQLVIFRNHIYGSIPEY 133 (959)
Q Consensus 66 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~------~------~~~~~~~~l~~L~~L~L~~n~~~~~~p~~ 133 (959)
.+++.|+|++|.+.|.+|.+|+.+++|++|+|++|.+. + ..|... +..|+ +++++|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 57999999999999999999999999999999999773 1 122222 44556 777777777666665
Q ss_pred cCCC--cccEEeccCCccccccCcccccccceeEEEcc--ccccccccCccccCCcCCceEeccCCccccc---------
Q 002155 134 LSKL--PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAA--NNLLEGSLPYEVGNAAALERLVLTNNMLKGH--------- 200 (959)
Q Consensus 134 ~~~~--~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~--~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~--------- 200 (959)
+... .+..+++....+.. .....++.+.+. .|++++ +|..|+++++|++|+|++|.+++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~ 230 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENE 230 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCT
T ss_pred HHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccc
Confidence 5533 13333443322221 111223333332 567776 788888888888888888888864
Q ss_pred --------CCcccc--CCCCCCEEEccCCcCCccCCccccCCCCCCEEEccccc-CCC-CCchhhhcc------cCCCee
Q 002155 201 --------LPKEIG--NLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNN-LSG-LIPEKIADL------AQLQCL 262 (959)
Q Consensus 201 --------~~~~~~--~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l------~~L~~L 262 (959)
+|..++ ++++|++|+|++|.+.+.+|..++++++|++|+|++|+ +++ .+|..++.+ ++|++|
T Consensus 231 ~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L 310 (636)
T 4eco_A 231 NSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQII 310 (636)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEE
T ss_pred ccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEE
Confidence 777777 88888888888888877888888888888888888887 776 667777766 677777
Q ss_pred EcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCc--ccCCcccccEEEccCCcCcccCCccccCC
Q 002155 263 VLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPE--ELGSCVVVVDLLLNNNMLSGKIPGSLSRL 340 (959)
Q Consensus 263 ~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~--~~~~~~~L~~L~L~~n~i~~~~~~~~~~l 340 (959)
+|++|+++ .+|. .++.+++|+.|++++|++++.+| .|..+
T Consensus 311 ~L~~n~l~-------------------------------------~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l 352 (636)
T 4eco_A 311 YIGYNNLK-------------------------------------TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSE 352 (636)
T ss_dssp ECCSSCCS-------------------------------------SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEE
T ss_pred ECCCCcCC-------------------------------------ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCC
Confidence 77777664 4555 66677777777777777776666 77777
Q ss_pred CCCCEEEccCCCCCCCCCCCcCCCCc-ceEEEeeCcccCCccccccccCC--CCcEEEccCCcCCCCCCCccC-------
Q 002155 341 TNLTTLDLSRNQLTGPIPSEFGDSIK-LQGLYLGNNQLTGSIPWSLGSLG--GLVKLNLTGNKLSGKVPTSFG------- 410 (959)
Q Consensus 341 ~~L~~L~Ls~n~l~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~--~L~~L~L~~N~i~~~~~~~~~------- 410 (959)
++|++|++++|+++ .+|..+..+++ |+.|++++|.++ .+|..+..++ +|++|++++|++++..|..|.
T Consensus 353 ~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~ 430 (636)
T 4eco_A 353 IKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPF 430 (636)
T ss_dssp EEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCC
T ss_pred CCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccc
Confidence 77777888777777 56667777777 888888888877 6676666544 788888888888887887777
Q ss_pred CcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchh-----hhhhceeccCCcccCCCCCcccc-
Q 002155 411 NLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSA-----AWKIATMNMSNNLFDGGLPRSLG- 484 (959)
Q Consensus 411 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~-----~~~l~~L~ls~N~l~~~~p~~~~- 484 (959)
.+++|++|+|++|+++...+..+..+++|+.|++++|+++.++...|.... ...++.|++++|.++ .+|..+.
T Consensus 431 ~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 509 (636)
T 4eco_A 431 KGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRA 509 (636)
T ss_dssp CCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGST
T ss_pred cCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhh
Confidence 778899999999999854445566789999999999999988887776542 127999999999999 6888887
Q ss_pred -CccccceeeeccccccccCCcCCcCCCCCcEEeC------CCCcCCCCCCccccCCCCccEEecccCcCcccCCCCccc
Q 002155 485 -NLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDV------SRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGIC 557 (959)
Q Consensus 485 -~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 557 (959)
.+++|+.|+|++|++++ +|..+..+++|++|+| ++|++.+.+|..+..+++|++|+|++|++..++... .
T Consensus 510 ~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ip~~~--~ 586 (636)
T 4eco_A 510 TTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRKVNEKI--T 586 (636)
T ss_dssp TTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCBCCSCC--C
T ss_pred ccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCCccCHhH--h
Confidence 99999999999999996 8999999999999999 568899999999999999999999999996555443 3
Q ss_pred CCCccccccCCCCCCC
Q 002155 558 QNLSKISLTGNKDLCG 573 (959)
Q Consensus 558 ~~l~~l~l~~N~~~c~ 573 (959)
++|+.+++++|++.|-
T Consensus 587 ~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 587 PNISVLDIKDNPNISI 602 (636)
T ss_dssp TTCCEEECCSCTTCEE
T ss_pred CcCCEEECcCCCCccc
Confidence 8999999999999873
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=427.47 Aligned_cols=261 Identities=29% Similarity=0.433 Sum_probs=211.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCC-CceeccccceecC-C
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKH-QNLVPLLGYCSFD-E 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~-~ 748 (959)
.++|++.+.||+|+||+||+|++. .++.||||++.... ....++|.+|++++++++| ||||+++|+|..+ +
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~ 142 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 142 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence 468899999999999999999854 23579999987543 3445679999999999965 8999999998664 5
Q ss_pred ceEEEEEeccCCCHHHHHhhhcC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTG------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN 816 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 816 (959)
..++|||||++|+|.++++.... ....+++.++..++.|||+||+||| +++||||||||+|||++
T Consensus 143 ~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~NILl~ 219 (353)
T 4ase_A 143 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLS 219 (353)
T ss_dssp CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEC
T ss_pred EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCccceeeC
Confidence 68999999999999999986432 1235899999999999999999999 88999999999999999
Q ss_pred CCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCc
Q 002155 817 EEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGN 894 (959)
Q Consensus 817 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~ 894 (959)
+++.+||+|||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||......
T Consensus 220 ~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~----- 294 (353)
T 4ase_A 220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----- 294 (353)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-----
T ss_pred CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH-----
Confidence 9999999999999876543332 2345578999999999999999999999999999999998 89998643211
Q ss_pred hHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 895 LVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..+...+..+... .. +..+...+.+++.+||+.||++||||+||+++|+++.
T Consensus 295 --~~~~~~i~~g~~~-----~~----p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll 346 (353)
T 4ase_A 295 --EEFCRRLKEGTRM-----RA----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346 (353)
T ss_dssp --HHHHHHHHHTCCC-----CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --HHHHHHHHcCCCC-----CC----CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 1233333333211 11 1122346788999999999999999999999999873
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-46 Score=452.27 Aligned_cols=521 Identities=19% Similarity=0.153 Sum_probs=346.3
Q ss_pred cCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccc
Q 002155 32 GSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFE 111 (959)
Q Consensus 32 ~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 111 (959)
+++|+.+. +.+++|+|++|++.+..|.+|.++++|++|||++|+|++..|.+|.++++|++|+|++|+|+++++++|.
T Consensus 44 ~~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~ 121 (635)
T 4g8a_A 44 YKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFS 121 (635)
T ss_dssp SSCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGT
T ss_pred CccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhc
Confidence 34554443 2455566666655544444555566666666666655544455555556666666666655555555555
Q ss_pred cCCCCceeeecccccccccCcccCCC-cccEEeccCCccccc-cCcccccccceeEEEccccccccccCccccCCcCCc-
Q 002155 112 KCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGI-IPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALE- 188 (959)
Q Consensus 112 ~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~-~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~- 188 (959)
++++|++|+|++|.+.+..+..++.+ +|++|++++|++++. .|..+..+++|++|++++|++++..+..|..+.+++
T Consensus 122 ~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~ 201 (635)
T 4g8a_A 122 GLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPL 201 (635)
T ss_dssp TCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTT
T ss_pred CCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhh
Confidence 55556555555555555444444444 355555555555442 344455555555555555555544455554444332
Q ss_pred ---eEeccCCcccccCCccccCCCCCCEEEccCCcCCc-cCCccccCCCCCCEEEccccc------CCCCCchhhhcccC
Q 002155 189 ---RLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDG-IIPYELGDCISLTTLDLGNNN------LSGLIPEKIADLAQ 258 (959)
Q Consensus 189 ---~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~L~L~~N~------l~~~~~~~~~~l~~ 258 (959)
.++++.|.++...+.. .....++.+++++|.... ..+..+..+..++...+..+. +.......+..+..
T Consensus 202 ~~~~~~ls~n~l~~i~~~~-~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 280 (635)
T 4g8a_A 202 LNLSLDLSLNPMNFIQPGA-FKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCN 280 (635)
T ss_dssp CCCEEECTTCCCCEECTTT-TTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGG
T ss_pred hhhhhhcccCcccccCccc-ccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccc
Confidence 3455555555322222 222334455555554331 222334444444444443221 12222333444444
Q ss_pred CCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCcccc
Q 002155 259 LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLS 338 (959)
Q Consensus 259 L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~ 338 (959)
+..+.+..+...... ......+..+.++..+++..+.+... ..+.....++.|.+.+|.+....+.
T Consensus 281 l~~~~l~~~~~~~~~---------~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~~--- 346 (635)
T 4g8a_A 281 LTIEEFRLAYLDYYL---------DGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTL--- 346 (635)
T ss_dssp SEEEEEEEECCCSCE---------EECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCCC---
T ss_pred hhhhhhhhhhhcccc---------cchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcCcc---
Confidence 444444433322100 11122344455666777777776533 2355667888999999888765443
Q ss_pred CCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCC--ccccccccCCCCcEEEccCCcCCCCCCCccCCccccc
Q 002155 339 RLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTG--SIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELT 416 (959)
Q Consensus 339 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 416 (959)
.++.|+.+++++|.+... ..+..+++|+.|++++|.+.. ..+..+..+.+|+.+++..|.+. ..+..+..+++|+
T Consensus 347 ~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~ 423 (635)
T 4g8a_A 347 KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLE 423 (635)
T ss_dssp BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCC
T ss_pred cchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-ccccccccccccc
Confidence 467788999999987743 345578899999999999863 34556678889999999999988 4566788999999
Q ss_pred ccccCCccccCCCc-hhhhcccccceEeeccccccCCccccccchhhhhhceeccCCccc-CCCCCccccCccccceeee
Q 002155 417 HLDLSFNELDGQLP-SSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLF-DGGLPRSLGNLSYLTNLDL 494 (959)
Q Consensus 417 ~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l-~~~~p~~~~~l~~L~~L~L 494 (959)
.++++.|......+ ..+..+++++.++++.|.+++..+..|.... .++.|++++|.+ .+..|..|..+++|++|+|
T Consensus 424 ~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~--~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~L 501 (635)
T 4g8a_A 424 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS--SLEVLKMAGNSFQENFLPDIFTELRNLTFLDL 501 (635)
T ss_dssp EEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCT--TCCEEECTTCEEGGGEECSCCTTCTTCCEEEC
T ss_pred chhhhhccccccccccccccccccccccccccccccccccccccch--hhhhhhhhhcccccccCchhhhhccccCEEEC
Confidence 99999888765444 6788999999999999999999888887766 789999999975 4568899999999999999
Q ss_pred ccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCc-cc-CCCccccccCCCCCC
Q 002155 495 HENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSG-IC-QNLSKISLTGNKDLC 572 (959)
Q Consensus 495 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~-~~l~~l~l~~N~~~c 572 (959)
++|++++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++++|... .+ .+|+.+++++|||.|
T Consensus 502 s~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 502 SQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred CCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 9999999899999999999999999999999999999999999999999999999998753 33 679999999999999
Q ss_pred CC
Q 002155 573 GK 574 (959)
Q Consensus 573 ~~ 574 (959)
+|
T Consensus 582 ~C 583 (635)
T 4g8a_A 582 TC 583 (635)
T ss_dssp SG
T ss_pred cC
Confidence 64
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-48 Score=453.10 Aligned_cols=456 Identities=19% Similarity=0.201 Sum_probs=327.5
Q ss_pred cEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeeccc
Q 002155 45 ESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRN 124 (959)
Q Consensus 45 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 124 (959)
++|++++|++. .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57999999998 7888776 89999999999999777789999999999999999999988999999999999999999
Q ss_pred ccccccCcccCCCcccEEeccCCcccc-ccCcccccccceeEEEccccccccccCccccCCcCC--ceEeccCCcc--cc
Q 002155 125 HIYGSIPEYLSKLPLMVLDLDSNNFTG-IIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAAL--ERLVLTNNML--KG 199 (959)
Q Consensus 125 ~~~~~~p~~~~~~~L~~L~ls~n~l~~-~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L--~~L~L~~n~i--~~ 199 (959)
.+.+ +|.. ...+|++|++++|++++ ..|..++++++|++|++++|.+++ ..+..+++| ++|++++|.+ .+
T Consensus 80 ~l~~-lp~~-~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~ 154 (520)
T 2z7x_B 80 KLVK-ISCH-PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEK 154 (520)
T ss_dssp CCCE-EECC-CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSS
T ss_pred ceee-cCcc-ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccc
Confidence 9984 5554 55579999999999987 467889999999999999998875 467777888 9999999998 77
Q ss_pred cCCccccCCC-CCCEEEccCCcCCccCC-ccccCCCCCCEEEccccc-------CCCCCchhhhcccCCCeeEcccccCC
Q 002155 200 HLPKEIGNLS-ALSVLDLNSNLFDGIIP-YELGDCISLTTLDLGNNN-------LSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 200 ~~~~~~~~l~-~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~-------l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
..|..+..+. +...+++++|.+.+.++ ..+..+++|+.|++++|. +.+.++ .+..+++|+.|++++|.++
T Consensus 155 ~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~ 233 (520)
T 2z7x_B 155 EDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETT 233 (520)
T ss_dssp CCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEE
T ss_pred cccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccC
Confidence 7787777766 34467788888765444 457778888999998887 555444 6788888888888888765
Q ss_pred CCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccc-----cCCCCCCE
Q 002155 271 GPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSL-----SRLTNLTT 345 (959)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~-----~~l~~L~~ 345 (959)
+..+.. +..... .++|+.|++++|++++.+|..+ ..+++|+.
T Consensus 234 ~~~~~~---------~~~~~~------------------------~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~ 280 (520)
T 2z7x_B 234 WNSFIR---------ILQLVW------------------------HTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSI 280 (520)
T ss_dssp HHHHHH---------HHHHHH------------------------TSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEE
T ss_pred HHHHHH---------HHHHhh------------------------hCcccEEEeecccccCccccchhhcccccCceeEe
Confidence 211000 000001 1234444444444444444444 45555555
Q ss_pred EEccCCCCCCCCCCCcCCC---CcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCC
Q 002155 346 LDLSRNQLTGPIPSEFGDS---IKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSF 422 (959)
Q Consensus 346 L~Ls~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 422 (959)
+++++|.+ ......+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++..|..++++++|++|++++
T Consensus 281 l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 357 (520)
T 2z7x_B 281 HQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQM 357 (520)
T ss_dssp EEEEECCC-CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCS
T ss_pred ccccccce-ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccC
Confidence 55555555 1111222222 34555555555554221 124566666677777766666666666777777777777
Q ss_pred ccccC--CCchhhhcccccceEeeccccccC-CccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccc
Q 002155 423 NELDG--QLPSSLSNILNLVGLYLQHNKLSG-PVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKF 499 (959)
Q Consensus 423 N~l~~--~~~~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 499 (959)
|++++ .+|..+..+++|+.|++++|++++ ++.. .+..+++|++|+|++|++
T Consensus 358 N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~--------------------------~~~~l~~L~~L~Ls~N~l 411 (520)
T 2z7x_B 358 NQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKG--------------------------DCSWTKSLLSLNMSSNIL 411 (520)
T ss_dssp SCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGC--------------------------SCCCCTTCCEEECCSSCC
T ss_pred CccCccccchHHHhhCCCCCEEECCCCcCCcccccc--------------------------hhccCccCCEEECcCCCC
Confidence 77764 344566677777777777777665 3322 245677888888888888
Q ss_pred cccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCC-CcccCCCccccccCCCCCCCC
Q 002155 500 TGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPR-SGICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 500 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~~~c~~ 574 (959)
++.+|..+. ++|++|++++|+|+ .+|..+..+++|++|++++|+++++++. ...+.+|+.+++++||+.|+|
T Consensus 412 ~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 412 TDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp CGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred Ccchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccC
Confidence 877777665 68899999999988 6777777889999999999999887765 456778899999999999853
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=417.24 Aligned_cols=248 Identities=25% Similarity=0.329 Sum_probs=197.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999853 47889999986532 2233467889999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
|||||+||+|.++++... .+++.++..++.||+.||+||| ++||+||||||+|||++.++++||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 999999999999998764 5899999999999999999999 899999999999999999999999999999865
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
... .......+||+.|||||++.+..|+.++||||+||++|||+||++||..... .+ +...+......
T Consensus 177 ~~~-~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-------~~-~~~~i~~~~~~--- 244 (304)
T 3ubd_A 177 IDH-EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-------KE-TMTMILKAKLG--- 244 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HH-HHHHHHHCCCC---
T ss_pred cCC-CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-------HH-HHHHHHcCCCC---
Confidence 432 2233456899999999999999999999999999999999999999964321 11 22222222110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM-----LHVLKF 952 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~ell~~ 952 (959)
.| ......+.+++.+||++||++|||+ +|++++
T Consensus 245 ~p-------~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 245 MP-------QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp CC-------TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred CC-------CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 11 1123467889999999999999984 677653
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-47 Score=446.34 Aligned_cols=434 Identities=18% Similarity=0.155 Sum_probs=307.4
Q ss_pred cEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCC-cccEEeccCC
Q 002155 69 KSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSN 147 (959)
Q Consensus 69 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n 147 (959)
++||+++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+.+..|..+..+ +|++|++++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 58999999999 6787775 899999999999998888899999999999998888887767666655 4777777777
Q ss_pred ccccccCcccccccceeEEEcccccccc-ccCccccCCcCCceEeccCCcccccCCccccCCCCC--CEEEccCCcC--C
Q 002155 148 NFTGIIPVSIWNSETLMEFSAANNLLEG-SLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSAL--SVLDLNSNLF--D 222 (959)
Q Consensus 148 ~l~~~~p~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L--~~L~L~~N~i--~ 222 (959)
+++++ |.. .+++|++|++++|.+++ .+|..|+++++|++|+|++|.|++ ..+..+++| ++|++++|.+ .
T Consensus 80 ~l~~l-p~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLVKI-SCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCCEE-ECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred ceeec-Ccc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 76632 322 45555555555555543 234455555555555555555543 234444444 5555555554 4
Q ss_pred ccCCccccCCC-CCCEEEcccccCCCCCc-hhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceec
Q 002155 223 GIIPYELGDCI-SLTTLDLGNNNLSGLIP-EKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDL 300 (959)
Q Consensus 223 ~~~~~~~~~l~-~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L 300 (959)
+..|..+..+. +...+++++|++.+..+ ..+..+++|+.|++++|.-.... .
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~----------------~---------- 207 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKC----------------S---------- 207 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTT----------------H----------
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeecccccccccccc----------------c----------
Confidence 44444444333 12233444444432222 23344444444444444310000 0
Q ss_pred CCCcCCCCCCcccCCcccccEEEccCCcCcccCCcccc---CCCCCCEEEccCCCCCCCCCCCc-----CCCCcceEEEe
Q 002155 301 SYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLS---RLTNLTTLDLSRNQLTGPIPSEF-----GDSIKLQGLYL 372 (959)
Q Consensus 301 ~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~---~l~~L~~L~Ls~n~l~~~~~~~~-----~~l~~L~~L~L 372 (959)
.+.+.+| .++.+++|+.|++.+|.+++..+..+. ..++|++|++++|++++..|..+ ..+.+|+.+++
T Consensus 208 ---~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l 283 (520)
T 2z7x_B 208 ---YFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQV 283 (520)
T ss_dssp ---HHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEE
T ss_pred ---eeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccc
Confidence 0333334 567778888888888887654332221 24689999999999998888888 88999999999
Q ss_pred eCcccCCccc-cccccC---CCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeecccc
Q 002155 373 GNNQLTGSIP-WSLGSL---GGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNK 448 (959)
Q Consensus 373 ~~n~l~~~~~-~~~~~l---~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 448 (959)
++|.+ .+| ..+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++..|..+..+++|+.|++++|+
T Consensus 284 ~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 359 (520)
T 2z7x_B 284 VSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQ 359 (520)
T ss_dssp EECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSC
T ss_pred cccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCc
Confidence 99999 344 455544 67999999999987432 23678899999999999998889999999999999999999
Q ss_pred ccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCc-CCcCCCCCcEEeCCCCcCCCCC
Q 002155 449 LSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPP-DLGNLMQLEYLDVSRNRLCGQI 527 (959)
Q Consensus 449 l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~ 527 (959)
+++++ .+|..+..+++|++|+|++|++++.+|. .+..+++|++|++++|++++..
T Consensus 360 l~~l~------------------------~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~ 415 (520)
T 2z7x_B 360 LKELS------------------------KIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTI 415 (520)
T ss_dssp CCBHH------------------------HHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGG
T ss_pred cCccc------------------------cchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcch
Confidence 87542 2345677899999999999999975665 4889999999999999999877
Q ss_pred CccccCCCCccEEecccCcCcccCCCCcccCCCccccccCCCCC
Q 002155 528 PETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDL 571 (959)
Q Consensus 528 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~ 571 (959)
|..+. ++|++|++++|+++.+++....+.+|+.+++++|+..
T Consensus 416 ~~~l~--~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~ 457 (520)
T 2z7x_B 416 FRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLK 457 (520)
T ss_dssp GGSCC--TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred hhhhc--ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCC
Confidence 77665 7999999999999988777778899999999999754
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-46 Score=450.47 Aligned_cols=458 Identities=20% Similarity=0.214 Sum_probs=280.4
Q ss_pred CCCcEEEcCCCcCCCCCCcccCCCCCCcEEEc-cCccccccCCcccccC-CCCceee---e------------ccccccc
Q 002155 66 SMLKSISLSNNFLSGSIPRELCTSESLEEIDL-DGNLLTGTIEGVFEKC-SNLSQLV---I------------FRNHIYG 128 (959)
Q Consensus 66 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L-~~n~l~~~~~~~~~~l-~~L~~L~---L------------~~n~~~~ 128 (959)
..++.|+|++|.+.|.+|.+|+.|++|++|+| ++|.+.+..+-.-... ..+.... + ....+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57999999999999999999999999999999 9998886533211111 0000000 0 0000000
Q ss_pred cc-------Cc-----ccCCCcccEEecc--CCccccccCcccccccceeEEEcccccccc-----------------cc
Q 002155 129 SI-------PE-----YLSKLPLMVLDLD--SNNFTGIIPVSIWNSETLMEFSAANNLLEG-----------------SL 177 (959)
Q Consensus 129 ~~-------p~-----~~~~~~L~~L~ls--~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~-----------------~~ 177 (959)
.. |. ......++.+.++ .|++++ +|..++++++|+.|++++|.+++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 00 00 0111223333343 377777 67778888888888888888876 27
Q ss_pred Ccccc--CCcCCceEeccCCcccccCCccccCCCCCCEEEccCCc-CCc-cCCccccCCC-------CCCEEEcccccCC
Q 002155 178 PYEVG--NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNL-FDG-IIPYELGDCI-------SLTTLDLGNNNLS 246 (959)
Q Consensus 178 ~~~~~--~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~-i~~-~~~~~~~~l~-------~L~~L~L~~N~l~ 246 (959)
|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|. +++ .+|..++.++ +|++|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 77766 77777777777777777777777777777777777776 776 5666555554 7777777777777
Q ss_pred CCCch--hhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCccc-ccEEE
Q 002155 247 GLIPE--KIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVV-VVDLL 323 (959)
Q Consensus 247 ~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~-L~~L~ 323 (959)
.+|. .|+.+++|+.|+|++|+++ .+| .+..+++|+.|++++|.++ .+|..+..+++ |+.|+
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-------------~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~ 625 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-------------AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLG 625 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-------------CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEE
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-------------hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEE
Confidence 4565 7777777777777777765 222 2334455555666666655 55555555555 55555
Q ss_pred ccCCcCcccCCccccCCCC--CCEEEccCCCCCCCCCCCc---C--CCCcceEEEeeCcccCCccccccccCCCCcEEEc
Q 002155 324 LNNNMLSGKIPGSLSRLTN--LTTLDLSRNQLTGPIPSEF---G--DSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNL 396 (959)
Q Consensus 324 L~~n~i~~~~~~~~~~l~~--L~~L~Ls~n~l~~~~~~~~---~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 396 (959)
+++|+++ .+|..+..++. |+.|++++|++.+.+|... . .+.+|+.|++++|.++...+..+..+++|+.|+|
T Consensus 626 Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~L 704 (876)
T 4ecn_A 626 FSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIIL 704 (876)
T ss_dssp CCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEEC
T ss_pred CcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEEC
Confidence 5555555 34444444432 5555555555554333221 1 2235555555555555222222334555555555
Q ss_pred cCCcCCCCCCCccCC-------cccccccccCCccccCCCchhhh--cccccceEeeccccccCCccccccchhhhhhce
Q 002155 397 TGNKLSGKVPTSFGN-------LKELTHLDLSFNELDGQLPSSLS--NILNLVGLYLQHNKLSGPVDELFSNSAAWKIAT 467 (959)
Q Consensus 397 ~~N~i~~~~~~~~~~-------l~~L~~L~L~~N~l~~~~~~~l~--~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~ 467 (959)
++|+|+.+.+..+.. +++|++|+|++|+++ .+|..+. .+++|+ .
T Consensus 705 s~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~--------------------------~ 757 (876)
T 4ecn_A 705 SNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLS--------------------------N 757 (876)
T ss_dssp CSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCC--------------------------E
T ss_pred CCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcC--------------------------E
Confidence 555555222222221 124455555555544 3444443 444444 4
Q ss_pred eccCCcccCCCCCccccCccccceeeecc------ccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEe
Q 002155 468 MNMSNNLFDGGLPRSLGNLSYLTNLDLHE------NKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLS 541 (959)
Q Consensus 468 L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 541 (959)
|+|++|.+++ +|..+..+++|+.|+|++ |++.+.+|..+..+++|+.|+|++|+| +.+|..+. ++|+.|+
T Consensus 758 L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~Ld 833 (876)
T 4ecn_A 758 MDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILD 833 (876)
T ss_dssp EECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEE
T ss_pred EEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEE
Confidence 5555555554 466666777888888765 788888999999999999999999999 57787765 6899999
Q ss_pred cccCcCcccCCCCc-ccCCCccccccCCCCCC
Q 002155 542 LAENRLEGMVPRSG-ICQNLSKISLTGNKDLC 572 (959)
Q Consensus 542 l~~N~l~~~~~~~~-~~~~l~~l~l~~N~~~c 572 (959)
|++|++..+.+... .......+.+.+|++.|
T Consensus 834 Ls~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~ 865 (876)
T 4ecn_A 834 IADNPNISIDVTSVCPYIEAGMYVLLYDKTQD 865 (876)
T ss_dssp CCSCTTCEEECGGGHHHHHTTCCEEECCTTSE
T ss_pred CCCCCCCccChHHccccccchheeecCCCccc
Confidence 99999887765432 11234556677777654
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-47 Score=408.93 Aligned_cols=251 Identities=24% Similarity=0.385 Sum_probs=190.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCC--------
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE-------- 748 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-------- 748 (959)
++|++.+.||+|+||+||+|+++ +|+.||||++.... ....+.+.+|++++++++|||||+++++|.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46889999999999999999875 68999999986543 334567889999999999999999999886543
Q ss_pred ----ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEc
Q 002155 749 ----EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVA 824 (959)
Q Consensus 749 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 824 (959)
..|+|||||++|+|.++++... .....++..++.++.||++||+||| ++||+||||||+|||++.++.+||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEc
Confidence 3689999999999999998654 2334567788999999999999999 8899999999999999999999999
Q ss_pred cccccccccccccc-----------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCC
Q 002155 825 DFGLARLISACETH-----------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGG 893 (959)
Q Consensus 825 Dfg~~~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~ 893 (959)
|||+|+........ .....+||+.|||||++.+..|+.++||||+||++|||++ ||....+
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~----- 232 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME----- 232 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH-----
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH-----
Confidence 99999876532211 1234579999999999999999999999999999999996 7643111
Q ss_pred chHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 894 NLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... ....+.... .| +...+......+++.+||++||++|||+.|++++
T Consensus 233 -~~~-~~~~~~~~~-----~p----~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 233 -RVR-TLTDVRNLK-----FP----PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp -HHH-HHHHHHTTC-----CC----HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -HHH-HHHHHhcCC-----CC----CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 011 111111111 01 1112233456789999999999999999999873
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=436.89 Aligned_cols=523 Identities=19% Similarity=0.161 Sum_probs=420.7
Q ss_pred ccCCCCCcCccccCccchhhhhhcCCcccCC-CcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCC
Q 002155 4 FNALSGSLPEELSDLPILTFAAEKNQLSGSL-PSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSI 82 (959)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 82 (959)
.-+|+ ++|+.|- +.++.++..+|-++.+ |.+|.++++|++|+|++|++.+..|.+|+++++|++|+|++|+|++..
T Consensus 40 ~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~ 116 (635)
T 4g8a_A 40 ELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 116 (635)
T ss_dssp TSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEEC
T ss_pred CCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCC
Confidence 45788 8998763 2345555554444455 468999999999999999999777788999999999999999999777
Q ss_pred CcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccc-cCcccCCC-cccEEeccCCccccccCcccccc
Q 002155 83 PRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGS-IPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNS 160 (959)
Q Consensus 83 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~-~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~ 160 (959)
+..|.++++|++|+|++|+++++++..|+++++|++|+|++|.+... .|..+..+ .|++|++++|++++..|..+..+
T Consensus 117 ~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L 196 (635)
T 4g8a_A 117 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVL 196 (635)
T ss_dssp GGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHH
T ss_pred HHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccch
Confidence 78899999999999999999999999999999999999999999764 57777766 59999999999999999888877
Q ss_pred cce----eEEEccccccccccCccccCCcCCceEeccCCcccc-cCCccccCCCCCCEEEccCCc------CCccCCccc
Q 002155 161 ETL----MEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKG-HLPKEIGNLSALSVLDLNSNL------FDGIIPYEL 229 (959)
Q Consensus 161 ~~L----~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~N~------i~~~~~~~~ 229 (959)
.++ ..++++.|.++...+. ......++.|++++|.... ..+..+..+..++...+..+. +.......+
T Consensus 197 ~~l~~~~~~~~ls~n~l~~i~~~-~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~ 275 (635)
T 4g8a_A 197 HQMPLLNLSLDLSLNPMNFIQPG-AFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSAL 275 (635)
T ss_dssp HTCTTCCCEEECTTCCCCEECTT-TTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTT
T ss_pred hhhhhhhhhhhcccCcccccCcc-cccchhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccccccc
Confidence 654 4788999999855554 4455567889999987653 344567888888887775433 333344455
Q ss_pred cCCCCCCEEEcccccCCC---CCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCC
Q 002155 230 GDCISLTTLDLGNNNLSG---LIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLS 306 (959)
Q Consensus 230 ~~l~~L~~L~L~~N~l~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~ 306 (959)
..+..+..+++..+.... ..+..+..+.+++.+++.+|.+. ...++.....++.|++++|.+.
T Consensus 276 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~--------------~~~~~~~~~~L~~L~l~~~~~~ 341 (635)
T 4g8a_A 276 EGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIE--------------RVKDFSYNFGWQHLELVNCKFG 341 (635)
T ss_dssp GGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEE--------------ECGGGGSCCCCSEEEEESCEES
T ss_pred ccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccc--------------cccccccchhhhhhhccccccc
Confidence 666677777776654432 23455677788888888888764 2334455567788888888887
Q ss_pred CCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCC--CCCCCcCCCCcceEEEeeCcccCCccccc
Q 002155 307 GPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTG--PIPSEFGDSIKLQGLYLGNNQLTGSIPWS 384 (959)
Q Consensus 307 ~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 384 (959)
...+. .+..|+.+.+..|.+... ..+..+++|+.|++++|.+.. ..+..+..+.+|+.++++.|.+. ..+..
T Consensus 342 ~~~~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~ 415 (635)
T 4g8a_A 342 QFPTL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSN 415 (635)
T ss_dssp SCCCC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSC
T ss_pred CcCcc---cchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-ccccc
Confidence 55443 456678888888887643 335578999999999998863 34455667789999999999887 45667
Q ss_pred cccCCCCcEEEccCCcCCCCCC-CccCCcccccccccCCccccCCCchhhhcccccceEeeccccc-cCCccccccchhh
Q 002155 385 LGSLGGLVKLNLTGNKLSGKVP-TSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKL-SGPVDELFSNSAA 462 (959)
Q Consensus 385 ~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l-~~~~~~~~~~~~~ 462 (959)
+..+++|+.+++.+|......+ ..|..+++++.++++.|.+.+..+..+..+++|+.|++++|++ .++.++.|....
T Consensus 416 ~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~- 494 (635)
T 4g8a_A 416 FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELR- 494 (635)
T ss_dssp CTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCT-
T ss_pred ccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhcc-
Confidence 8889999999999887765543 5678899999999999999988888999999999999999974 455667777665
Q ss_pred hhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCC-CCccEEe
Q 002155 463 WKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSL-SNLLYLS 541 (959)
Q Consensus 463 ~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~ 541 (959)
.++.|+|++|++++..|..|.++++|++|+|++|+|++..|..|..+++|++|||++|+|++..|..+..+ ++|++|+
T Consensus 495 -~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~ 573 (635)
T 4g8a_A 495 -NLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLN 573 (635)
T ss_dssp -TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEE
T ss_pred -ccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEE
Confidence 78999999999999999999999999999999999998888899999999999999999999999999998 6899999
Q ss_pred cccCcCcccCC
Q 002155 542 LAENRLEGMVP 552 (959)
Q Consensus 542 l~~N~l~~~~~ 552 (959)
|++|++.+-..
T Consensus 574 L~~Np~~C~C~ 584 (635)
T 4g8a_A 574 LTQNDFACTCE 584 (635)
T ss_dssp CTTCCBCCSGG
T ss_pred eeCCCCcccCC
Confidence 99999998654
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-45 Score=431.31 Aligned_cols=457 Identities=19% Similarity=0.152 Sum_probs=312.6
Q ss_pred cccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeec
Q 002155 43 QMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIF 122 (959)
Q Consensus 43 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 122 (959)
..+++++++|++. .+|..+. ++|++|+|++|++++..|.+|.++++|++|+|++|++++..|++|.++++|++|+|+
T Consensus 32 ~~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 32 LESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp -CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 3488999999988 5887664 889999999999997777899999999999999999998889999999999999999
Q ss_pred ccccccccCcccCCCcccEEeccCCccccc-cCcccccccceeEEEccccccccccCccccCCcCC--ceEeccCCcc--
Q 002155 123 RNHIYGSIPEYLSKLPLMVLDLDSNNFTGI-IPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAAL--ERLVLTNNML-- 197 (959)
Q Consensus 123 ~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~-~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L--~~L~L~~n~i-- 197 (959)
+|.+.. +|.. ...+|++|++++|++++. .|..|.++++|++|++++|.+++ ..+..+++| ++|++++|.+
T Consensus 109 ~N~l~~-lp~~-~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 109 HNRLQN-ISCC-PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp TSCCCE-ECSC-CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEESSCCC
T ss_pred CCcCCc-cCcc-ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc---CchhhhhhceeeEEEeecccccc
Confidence 999884 4544 445688899999988874 35778888888888888888774 345555555 8888888887
Q ss_pred cccCCccccCCC--CCCEEEccCCcCCccCCc-cccCCCCCCEEEcccccCC----CCCchhhhcccCCCeeEcccccCC
Q 002155 198 KGHLPKEIGNLS--ALSVLDLNSNLFDGIIPY-ELGDCISLTTLDLGNNNLS----GLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 198 ~~~~~~~~~~l~--~L~~L~L~~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
++..|..|..+. .| .+++++|.+.+.++. .+..+++|+.|++++|+.. ......|..+++|+.|+++++.+.
T Consensus 184 ~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~ 262 (562)
T 3a79_B 184 KGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETT 262 (562)
T ss_dssp CSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEEC
T ss_pred cccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCc
Confidence 667777777654 33 456777777654443 4556777788888777421 011345667777777777766554
Q ss_pred CCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccc-----cCCCCCCE
Q 002155 271 GPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSL-----SRLTNLTT 345 (959)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~-----~~l~~L~~ 345 (959)
+ |.+.+. +..+ ...+|++|++++|.+++.+|..+ ..++.|+.
T Consensus 263 ~-------------------------------~~~~~~-~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~ 309 (562)
T 3a79_B 263 W-------------------------------KCSVKL-FQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMI 309 (562)
T ss_dssp H-------------------------------HHHHHH-HHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEE
T ss_pred H-------------------------------HHHHHH-HHhh-hcccccEEEEeccEeeccccchhhhcccccchheeh
Confidence 1 111100 0111 11245556666666555555544 45555555
Q ss_pred EEccCCCCCCCCC-CCcCC---CCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccC
Q 002155 346 LDLSRNQLTGPIP-SEFGD---SIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLS 421 (959)
Q Consensus 346 L~Ls~n~l~~~~~-~~~~~---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 421 (959)
++++.|.+ ..| ..+.. ..+|+.|++++|.+.... ....+++|++|++++|++++..|..+.++++|++|+++
T Consensus 310 ~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 385 (562)
T 3a79_B 310 EHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQ 385 (562)
T ss_dssp EEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECC
T ss_pred hhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECC
Confidence 55555555 122 11111 134666666666654221 11455666666666666665556666666666666666
Q ss_pred CccccCCC--chhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCC-ccccCccccceeeecccc
Q 002155 422 FNELDGQL--PSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLP-RSLGNLSYLTNLDLHENK 498 (959)
Q Consensus 422 ~N~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~ 498 (959)
+|++++.. |..+..+++|+.|++++|++++ .+| ..+..+++|++|+|++|+
T Consensus 386 ~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~--------------------------~~~~~~~~~l~~L~~L~l~~n~ 439 (562)
T 3a79_B 386 RNGLKNFFKVALMTKNMSSLETLDVSLNSLNS--------------------------HAYDRTCAWAESILVLNLSSNM 439 (562)
T ss_dssp SSCCCBTTHHHHTTTTCTTCCEEECTTSCCBS--------------------------CCSSCCCCCCTTCCEEECCSSC
T ss_pred CCCcCCcccchhhhcCCCCCCEEECCCCcCCC--------------------------ccChhhhcCcccCCEEECCCCC
Confidence 66665422 2445556666666666665554 222 346678899999999999
Q ss_pred ccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCC-CcccCCCccccccCCCCCCCC
Q 002155 499 FTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPR-SGICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 499 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~~~c~~ 574 (959)
+++.+|..+. ++|++|+|++|+|+ .+|..+..+++|++|++++|+++++++. ...+.+|+.+++++|||.|+|
T Consensus 440 l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 440 LTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp CCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCH
T ss_pred CCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCc
Confidence 9877777665 68999999999998 5777677999999999999999988776 566788999999999999954
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=400.05 Aligned_cols=263 Identities=24% Similarity=0.319 Sum_probs=200.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceec------CC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSF------DE 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~ 748 (959)
.++|++.+.||+|+||+||+|+++ +|+.||||++.... ....+.+.+|+++|+.++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 367999999999999999999875 69999999996532 3344568899999999999999999998653 36
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..|+|||||+ |+|.+++.... .+++.++..++.||+.||+||| +.|||||||||+|||++.++.+||+|||+
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~----~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ----PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS----CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEEeCCC-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecce
Confidence 7899999996 68999997643 6899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccc---cccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh
Q 002155 829 ARLISAC---ETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904 (959)
Q Consensus 829 ~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (959)
|+.+... ........+||+.|||||++.+. .++.++||||+||++|||++|++||...... +....+.....
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~----~~l~~I~~~~g 280 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV----HQLQLIMMVLG 280 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH----HHHHHHHHHHC
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH----HHHHHHHHhcC
Confidence 9876432 12233457899999999987765 5699999999999999999999999653211 11111111111
Q ss_pred cCcccccc-------------CccccCCC----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 905 KGQAADVL-------------DPTVLTAD----SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 905 ~~~~~~~~-------------~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........ .+...+.. .......+.+++.+||..||++|||++|++++
T Consensus 281 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 281 TPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp CCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred CCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 11000000 00000000 01123457889999999999999999999874
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-44 Score=391.27 Aligned_cols=281 Identities=40% Similarity=0.655 Sum_probs=240.6
Q ss_pred HHHHHhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 673 HILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 673 ~~~~~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
++..++++|+..+.||+|+||.||+|++++++.||||++........+.+.+|+++++.++||||+++++++..++..++
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMIL 112 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEE
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence 34457789999999999999999999988899999999887666667789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.........+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 189 (321)
T 2qkw_B 113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKG 189 (321)
T ss_dssp EEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 99999999999999765544456899999999999999999999 789999999999999999999999999999765
Q ss_pred cccc-ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 833 SACE-THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 833 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.... ........||+.|+|||++.+..++.++||||+|+++|||++|+.||....+. .......|.............
T Consensus 190 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 268 (321)
T 2qkw_B 190 TELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR-EMVNLAEWAVESHNNGQLEQI 268 (321)
T ss_dssp SSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS-SCCCHHHHTHHHHTTTCCCSS
T ss_pred ccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH-HHHHHHHHhhhccccccHHHh
Confidence 4322 22223446899999999988888999999999999999999999999765433 334555666665555555566
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.++........+....+.+++.+||+.||++|||++|++++|+++.
T Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314 (321)
T ss_dssp SSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 6666666667888999999999999999999999999999999874
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=397.94 Aligned_cols=199 Identities=27% Similarity=0.349 Sum_probs=169.7
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecCCceE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 751 (959)
..++|++.+.||+|+||+||+|+.+ +++.||||++.... ....+.+|+++++.+ +|||||+++++|.++++.|
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~ 96 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV 96 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence 4578999999999999999999753 46789999986543 235678899999988 6999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC-CcEEEccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE-FEAKVADFGLAR 830 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~ 830 (959)
+||||+++|+|.++++ .+++.++..++.|++.||+||| +.||+||||||+|||++.+ +.+||+|||+|+
T Consensus 97 lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~ 166 (361)
T 4f9c_A 97 IAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166 (361)
T ss_dssp EEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence 9999999999999984 3788999999999999999999 8999999999999999877 799999999997
Q ss_pred ccccccc---------------------------cccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCC
Q 002155 831 LISACET---------------------------HVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEP 882 (959)
Q Consensus 831 ~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p 882 (959)
....... ......+||+.|||||++.+. .|+.++||||+||++|||++|+.|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P 246 (361)
T 4f9c_A 167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246 (361)
T ss_dssp ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence 5432111 112345799999999988765 589999999999999999999999
Q ss_pred CCCCC
Q 002155 883 TGPEF 887 (959)
Q Consensus 883 ~~~~~ 887 (959)
|....
T Consensus 247 f~~~~ 251 (361)
T 4f9c_A 247 FYKAS 251 (361)
T ss_dssp SSCCS
T ss_pred CCCCC
Confidence 96543
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-44 Score=392.34 Aligned_cols=291 Identities=42% Similarity=0.711 Sum_probs=245.2
Q ss_pred ccccCHHHHHHHhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccch-hhHHHHHHHHHHHhcCCCCceeccccce
Q 002155 666 LMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYC 744 (959)
Q Consensus 666 ~~~~~~~~~~~~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~ 744 (959)
...++..++...+++|++.+.||+|+||.||+|+.++|+.||||++..... .....+.+|+++++.++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 456788889999999999999999999999999988899999999875432 2233688999999999999999999999
Q ss_pred ecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEc
Q 002155 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVA 824 (959)
Q Consensus 745 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 824 (959)
..++..++||||+++|+|.++++........+++..++.++.|++.||+|||+.+..||+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999998876556679999999999999999999994222399999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC-ccccCCchHHHHHHHh
Q 002155 825 DFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEF-KDIEGGNLVGWVFQKM 903 (959)
Q Consensus 825 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~-~~~~~~~~~~~~~~~~ 903 (959)
|||.++..............||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..........|+....
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 999998765444444455679999999999988889999999999999999999999995321 1223344555665555
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
.........+.........+....+.+++.+||+.||++|||++|++++|++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 257 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp SSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred hchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 55555556666666667788899999999999999999999999999999864
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=409.11 Aligned_cols=250 Identities=23% Similarity=0.298 Sum_probs=200.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHH---HHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHRE---FTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~---~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.++||+|+||+||+|+.+ +|+.||||++.+.. ...... ...++.+++.++|||||+++++|.+++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 378999999999999999999875 69999999986432 111222 23456777888999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
|+|||||+||+|.+++.... .+++..+..++.||+.||+||| +.|||||||||+|||++.+|++||+|||+|+
T Consensus 268 ylVmEy~~GGdL~~~l~~~~----~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceee
Confidence 99999999999999998764 5899999999999999999999 8999999999999999999999999999998
Q ss_pred ccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
..... .....+||+.|||||++.+ ..|+.++||||+||++|||++|.+||...... +... +...+......
T Consensus 341 ~~~~~---~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~----~~~~-i~~~i~~~~~~ 412 (689)
T 3v5w_A 341 DFSKK---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK----DKHE-IDRMTLTMAVE 412 (689)
T ss_dssp ECSSC---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC----CHHH-HHHHHHHCCCC
T ss_pred ecCCC---CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHH-HHHhhcCCCCC
Confidence 76432 2345689999999999864 57999999999999999999999999643221 1111 22222221110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT-----MLHVLKF 952 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~ell~~ 952 (959)
. +......+.+++.+||++||++|++ ++||+++
T Consensus 413 ---~-------p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 413 ---L-------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp ---C-------CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred ---C-------CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 1 1123346788999999999999998 6887654
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-43 Score=414.44 Aligned_cols=458 Identities=20% Similarity=0.176 Sum_probs=333.7
Q ss_pred hhhhcCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccc
Q 002155 23 FAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLL 102 (959)
Q Consensus 23 ~~~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l 102 (959)
.++..++-.+.+|..+. +.|++|+|++|++.+..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++
T Consensus 35 ~l~ls~~~L~~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 112 (562)
T 3a79_B 35 MVDYSNRNLTHVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRL 112 (562)
T ss_dssp EEECTTSCCCSCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EEEcCCCCCccCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcC
Confidence 34444445556887665 6888899999998866667888999999999999998877788888889999999999998
Q ss_pred cccCCcccccCCCCceeeecccccccc-cCcccCCC-cccEEeccCCccccccCcccccccce--eEEEcccccc--ccc
Q 002155 103 TGTIEGVFEKCSNLSQLVIFRNHIYGS-IPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETL--MEFSAANNLL--EGS 176 (959)
Q Consensus 103 ~~~~~~~~~~l~~L~~L~L~~n~~~~~-~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L--~~L~l~~n~l--~~~ 176 (959)
+.+++. .+++|++|++++|.+.+. +|..+..+ +|++|++++|++++. .+..+++| ++|++++|.+ ++.
T Consensus 113 ~~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~ 186 (562)
T 3a79_B 113 QNISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGG 186 (562)
T ss_dssp CEECSC---CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSS
T ss_pred CccCcc---ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccccc
Confidence 854444 788899999999988874 45677666 588999999888763 34455555 9999999988 777
Q ss_pred cCccccCCc-CCceEeccCCcccccCCc-cccCCCCCCEEEccCCcC-----CccCCccccCCCCCCEEEcccccCCCCC
Q 002155 177 LPYEVGNAA-ALERLVLTNNMLKGHLPK-EIGNLSALSVLDLNSNLF-----DGIIPYELGDCISLTTLDLGNNNLSGLI 249 (959)
Q Consensus 177 ~~~~~~~l~-~L~~L~L~~n~i~~~~~~-~~~~l~~L~~L~L~~N~i-----~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 249 (959)
.|..|..+. ..-.+++++|.+.+.++. .+..+++|+.|++++|.. .+ ....+..+++|+.|+++++.+++..
T Consensus 187 ~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~~~ 265 (562)
T 3a79_B 187 ETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTWKC 265 (562)
T ss_dssp SCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECHHH
T ss_pred CcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcHHH
Confidence 788877765 222568888888765554 567889999999999852 22 2345778899999999988876432
Q ss_pred chh---hhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccC
Q 002155 250 PEK---IADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNN 326 (959)
Q Consensus 250 ~~~---~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~ 326 (959)
... ....++|++|++++|.++|.+|..... .....++.|+.+++..
T Consensus 266 ~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~-------------------------------~~~~~L~~L~~~~~~~ 314 (562)
T 3a79_B 266 SVKLFQFFWPRPVEYLNIYNLTITERIDREEFT-------------------------------YSETALKSLMIEHVKN 314 (562)
T ss_dssp HHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCC-------------------------------CCSCSCCEEEEEEEEE
T ss_pred HHHHHHhhhcccccEEEEeccEeeccccchhhh-------------------------------cccccchheehhhccc
Confidence 111 123348889999988887665542110 0013444455555555
Q ss_pred CcCcccCC-ccccC---CCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCC
Q 002155 327 NMLSGKIP-GSLSR---LTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLS 402 (959)
Q Consensus 327 n~i~~~~~-~~~~~---l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~ 402 (959)
|.+ ..| ..+.. ..+|++|++++|.+.... .+..+++|++|++++|++++..|..+..+++|++|++++|+++
T Consensus 315 ~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 390 (562)
T 3a79_B 315 QVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK 390 (562)
T ss_dssp CCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCC
T ss_pred cee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcC
Confidence 555 222 22222 256888888888876332 2257788888888888888778888888888888888888888
Q ss_pred CCC--CCccCCcccccccccCCccccCCCc-hhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCC
Q 002155 403 GKV--PTSFGNLKELTHLDLSFNELDGQLP-SSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGL 479 (959)
Q Consensus 403 ~~~--~~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~ 479 (959)
+.. |..|.++++|++|++++|++++.+| ..+..+++|+.|++++|++++..
T Consensus 391 ~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~-------------------------- 444 (562)
T 3a79_B 391 NFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV-------------------------- 444 (562)
T ss_dssp BTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGG--------------------------
T ss_pred CcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcch--------------------------
Confidence 533 4568888888999999998887444 45778888888888888876422
Q ss_pred CccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCC
Q 002155 480 PRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPR 553 (959)
Q Consensus 480 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 553 (959)
|..+. ++|+.|+|++|+++ .+|..+..+++|++|+|++|+|+++.+..+..+++|+.|++++|++.+..+.
T Consensus 445 ~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 445 FRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp GSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred hhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 12221 57888999999888 7888777899999999999999854444488899999999999999876654
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=413.13 Aligned_cols=253 Identities=23% Similarity=0.353 Sum_probs=209.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||+||+|+.+ +|+.||+|++........+.+.+|+++|+.++|||||+++++|.+++..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 368999999999999999999875 6999999999776666667789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC--CcEEEccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE--FEAKVADFGLARLISA 834 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfg~~~~~~~ 834 (959)
|+||+|.+++.... ..+++.++..++.||+.||+||| ++||+||||||+|||++.+ +.+||+|||+|+....
T Consensus 236 ~~gg~L~~~i~~~~---~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 236 MSGGELFEKVADEH---NKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp CCCCBHHHHHTCTT---SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred cCCCcHHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 99999999997543 35889999999999999999999 8999999999999999854 8999999999987753
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. ......+||+.|||||++.+..|+.++||||+||++|||++|.+||...... .....+...... +.+
T Consensus 310 ~--~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~--------~~~~~i~~~~~~--~~~ 377 (573)
T 3uto_A 310 K--QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--------ETLRNVKSCDWN--MDD 377 (573)
T ss_dssp T--SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTTCCC--CCS
T ss_pred C--CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHhCCCC--CCc
Confidence 2 2234468999999999999999999999999999999999999999653221 122222222111 111
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... ......+.+++.+||+.||++|||++|++++
T Consensus 378 ~~~----~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 378 SAF----SGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp GGG----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccc----cCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111 1123457789999999999999999999874
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-41 Score=386.39 Aligned_cols=378 Identities=20% Similarity=0.201 Sum_probs=256.1
Q ss_pred EecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccc-cCCcccccCCCCceeeecccc
Q 002155 47 LLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTG-TIEGVFEKCSNLSQLVIFRNH 125 (959)
Q Consensus 47 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~ 125 (959)
++.+++++. .+|. + .++|++|+|++|.+++..|..|.++++|++|++++|.+.+ +.+..|.++++|++|+|++|.
T Consensus 15 ~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~ 90 (455)
T 3v47_A 15 AICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQ 90 (455)
T ss_dssp EECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCT
T ss_pred cCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCc
Confidence 444444444 4443 1 1445555555555554445555555555555555555542 223445555555555555555
Q ss_pred cccccCcccCCC-cccEEeccCCccccccCcc--cccccceeEEEccccccccccCcc-ccCCcCCceEeccCCcccccC
Q 002155 126 IYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVS--IWNSETLMEFSAANNLLEGSLPYE-VGNAAALERLVLTNNMLKGHL 201 (959)
Q Consensus 126 ~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~--~~~~~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~L~~n~i~~~~ 201 (959)
+.+..|..+..+ +|++|++++|++++..|.. +..+++|++|++++|.+++..|.. |.++++|++|+|++|.+++..
T Consensus 91 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 170 (455)
T 3v47_A 91 FLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSIC 170 (455)
T ss_dssp TCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCC
T ss_pred cCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccC
Confidence 554445444444 2555555555555433332 666666666777777666555554 677777777777777777777
Q ss_pred CccccCC--CCCCEEEccCCcCCccCCcc--------ccCCCCCCEEEcccccCCCCCchhhhcc---cCCCeeEccccc
Q 002155 202 PKEIGNL--SALSVLDLNSNLFDGIIPYE--------LGDCISLTTLDLGNNNLSGLIPEKIADL---AQLQCLVLSHNN 268 (959)
Q Consensus 202 ~~~~~~l--~~L~~L~L~~N~i~~~~~~~--------~~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~Ls~N~ 268 (959)
+..+..+ .+|+.|++++|.+....+.. +..+++|++|++++|++++..|..+..+ ++|+.|++++|.
T Consensus 171 ~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~ 250 (455)
T 3v47_A 171 EEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSY 250 (455)
T ss_dssp TTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCT
T ss_pred hhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccc
Confidence 7777665 67778888888777554433 2356788888999888887777777665 788889988887
Q ss_pred CCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCC--cccccEEEccCCcCcccCCccccCCCCCCEE
Q 002155 269 LSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGS--CVVVVDLLLNNNMLSGKIPGSLSRLTNLTTL 346 (959)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~--~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 346 (959)
+.+.. +..+.+.+..+..+.. .++|+.|++++|.+++..|..|..+++|++|
T Consensus 251 ~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 304 (455)
T 3v47_A 251 NMGSS--------------------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQL 304 (455)
T ss_dssp TTSCC--------------------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred ccccc--------------------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEE
Confidence 65321 1112222222223332 2578888888888888888888888888888
Q ss_pred EccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCcccc
Q 002155 347 DLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELD 426 (959)
Q Consensus 347 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 426 (959)
++++|++++..|..|..+++|+.|++++|.+++..+..+..+++|++|+|++|++++..|..|.++++|++|++++|+++
T Consensus 305 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 384 (455)
T 3v47_A 305 TLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK 384 (455)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred ECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccc
Confidence 88888888877888888888888888888888777888888888888888888888777888888888888888888888
Q ss_pred CCCchhhhcccccceEeeccccccCCcc
Q 002155 427 GQLPSSLSNILNLVGLYLQHNKLSGPVD 454 (959)
Q Consensus 427 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 454 (959)
+..+..+..+++|+.|++++|++++..+
T Consensus 385 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 385 SVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cCCHhHhccCCcccEEEccCCCcccCCC
Confidence 7666777888888888888888876544
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-41 Score=366.61 Aligned_cols=260 Identities=25% Similarity=0.430 Sum_probs=212.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.++||+|+||.||+|++. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 357888999999999999999875 6899999998776667778899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++|+|.++++... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.++......
T Consensus 89 ~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 89 IKGGTLRGIIKSMD---SQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp CTTCBHHHHHHHCC---TTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred cCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 99999999998744 35899999999999999999999 8899999999999999999999999999998664322
Q ss_pred ccc-------------cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHh
Q 002155 837 THV-------------STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKM 903 (959)
Q Consensus 837 ~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (959)
... .....||+.|+|||++.+..++.++||||+|+++|||++|..||............. .....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~--~~~~~ 240 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN--VRGFL 240 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC--HHHHH
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh--hhccc
Confidence 111 114579999999999999999999999999999999999999986543322111110 11111
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
... .+ ..+...+.+++.+||+.||++|||++++++.|++++.
T Consensus 241 ~~~------~~-------~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 241 DRY------CP-------PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp HHT------CC-------TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccc------CC-------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 110 01 1112357889999999999999999999999998863
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-41 Score=365.35 Aligned_cols=251 Identities=23% Similarity=0.385 Sum_probs=208.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46799999999999999999986 46899999998766666667789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++|+|.+++... .+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 99 LAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp CTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 9999999999764 3788999999999999999999 8899999999999999999999999999998765432
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .......... ......
T Consensus 171 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~~~~~-~~~~~~--- 238 (297)
T 3fxz_A 171 S-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-------RALYLIATNG-TPELQN--- 238 (297)
T ss_dssp C-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHHC-SCCCSC---
T ss_pred c-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCC-CCCCCC---
Confidence 2 234457999999999999999999999999999999999999999643211 1111111111 111111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+......+.+++.+||+.||++|||++|++++
T Consensus 239 ----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 239 ----PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp ----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ----ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 12233467889999999999999999999874
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=380.69 Aligned_cols=419 Identities=23% Similarity=0.277 Sum_probs=184.2
Q ss_pred CCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCcee
Q 002155 40 NWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQL 119 (959)
Q Consensus 40 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 119 (959)
..++|++|++++|++ +.+|++++++++|++|++++|++++.+|..++.+++|+.+++++|.. .++++|
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L 76 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL 76 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence 346677777777777 57777777777777777777777777777777777664444443321 234444
Q ss_pred eecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccc
Q 002155 120 VIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKG 199 (959)
Q Consensus 120 ~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~ 199 (959)
++++|.+.+. |... .+|++|++++|++++ +|.. .++|++|++++|++++ +|.. .++|++|++++|++++
T Consensus 77 ~l~~~~l~~l-p~~~--~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~ 145 (454)
T 1jl5_A 77 ELNNLGLSSL-PELP--PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK 145 (454)
T ss_dssp ECTTSCCSCC-CSCC--TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS
T ss_pred EecCCccccC-CCCc--CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC
Confidence 4444444432 2111 235555555555554 3322 2455566666665552 2211 1567777777777774
Q ss_pred cCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcc
Q 002155 200 HLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSS 279 (959)
Q Consensus 200 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 279 (959)
+| +|+++++|++|++++|.+++ +|..+ .+|++|++++|+++++ | .|+.+++|+.|++++|++++ +|..
T Consensus 146 -lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l-~-~~~~l~~L~~L~l~~N~l~~-l~~~--- 213 (454)
T 1jl5_A 146 -LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEEL-P-ELQNLPFLTAIYADNNSLKK-LPDL--- 213 (454)
T ss_dssp -CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSS-CCCC---
T ss_pred -Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcC-c-cccCCCCCCEEECCCCcCCc-CCCC---
Confidence 55 47777777777777777774 44332 4677777777777763 4 47777777777777777663 2211
Q ss_pred hhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCC
Q 002155 280 YFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPS 359 (959)
Q Consensus 280 ~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 359 (959)
..+|+.|++++|.++ .+| .++.+++|+.|++++|++++. |. .+++|++|++++|++++ +|.
T Consensus 214 ------------~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l-~~---~~~~L~~L~l~~N~l~~-l~~ 274 (454)
T 1jl5_A 214 ------------PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTL-PD---LPPSLEALNVRDNYLTD-LPE 274 (454)
T ss_dssp ------------CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSC-CS---CCTTCCEEECCSSCCSC-CCC
T ss_pred ------------cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcc-cc---cccccCEEECCCCcccc-cCc
Confidence 124455555555555 344 255555555555555555532 22 12555666666666553 232
Q ss_pred CcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCc-ccccccccCCccccCCCchhhhcccc
Q 002155 360 EFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNL-KELTHLDLSFNELDGQLPSSLSNILN 438 (959)
Q Consensus 360 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~l~~l~~ 438 (959)
. .++|+.|++++|++++. |.. .++|++|++++|++++. + .+ ++|++|++++|++++ +|.. +++
T Consensus 275 ~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~ 338 (454)
T 1jl5_A 275 L---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPR 338 (454)
T ss_dssp C---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTT
T ss_pred c---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCc
Confidence 2 24555555555555531 110 13455555555555431 1 11 245555555555543 3322 244
Q ss_pred cceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccc--cCCcCCcCCCCCcEE
Q 002155 439 LVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTG--EIPPDLGNLMQLEYL 516 (959)
Q Consensus 439 L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L 516 (959)
|+.|++++|+++++ |. .+++|++|++++|++++ .+|.++..
T Consensus 339 L~~L~L~~N~l~~l---------------------------p~---~l~~L~~L~L~~N~l~~l~~ip~~l~~------- 381 (454)
T 1jl5_A 339 LERLIASFNHLAEV---------------------------PE---LPQNLKQLHVEYNPLREFPDIPESVED------- 381 (454)
T ss_dssp CCEEECCSSCCSCC---------------------------CC---CCTTCCEEECCSSCCSSCCCCCTTCCE-------
T ss_pred CCEEECCCCccccc---------------------------cc---hhhhccEEECCCCCCCcCCCChHHHHh-------
Confidence 44444444444433 32 24556666666666664 34444332
Q ss_pred eCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccCCCccccccCCCCCC
Q 002155 517 DVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLC 572 (959)
Q Consensus 517 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c 572 (959)
|+.|.+.+.+|.. +++|++|++++|++++.+.-. ..+..+.+.+|...|
T Consensus 382 -L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP---~sl~~L~~~~~~~~~ 430 (454)
T 1jl5_A 382 -LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIP---ESVEDLRMNSERVVD 430 (454)
T ss_dssp -EECCC--------------------------------------------------
T ss_pred -hhhcccccccccc---cCcCCEEECCCCcCCccccch---hhHhheeCcCcccCC
Confidence 2234444444442 356667777777776532111 234555555555444
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-40 Score=381.05 Aligned_cols=358 Identities=22% Similarity=0.177 Sum_probs=168.1
Q ss_pred cccEEeccCCccccccCcccccccceeEEEcccccccccc-CccccCCcCCceEeccCCcccccCCccccCCCCCCEEEc
Q 002155 138 PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSL-PYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDL 216 (959)
Q Consensus 138 ~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 216 (959)
.+++|++++|++++..|..|.++++|++|++++|.+.+.+ +..|.++++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 31 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 110 (455)
T 3v47_A 31 HVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTL 110 (455)
T ss_dssp TCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEEC
T ss_pred ccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeC
Confidence 3555555555555544555555555555555555443222 334444555555555555544444444445555555555
Q ss_pred cCCcCCccCCcc--ccCCCCCCEEEcccccCCCCCchh-hhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccc
Q 002155 217 NSNLFDGIIPYE--LGDCISLTTLDLGNNNLSGLIPEK-IADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293 (959)
Q Consensus 217 ~~N~i~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~ 293 (959)
++|.+++..+.. +..+++|++|+|++|++++..|.. |..+++|++|++++|+++
T Consensus 111 ~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~----------------------- 167 (455)
T 3v47_A 111 TQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK----------------------- 167 (455)
T ss_dssp TTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS-----------------------
T ss_pred CCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc-----------------------
Confidence 555444322222 444444455555444444443333 444444444444444443
Q ss_pred cccceecCCCcCCCCCCcccCCc--ccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEE
Q 002155 294 HHGVFDLSYNRLSGPIPEELGSC--VVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLY 371 (959)
Q Consensus 294 ~L~~l~L~~n~l~~~~p~~~~~~--~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 371 (959)
+..+..+..+ ..++.|++++|.+.+..+..+.. .....+..+++|+.|+
T Consensus 168 -------------~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~ 218 (455)
T 3v47_A 168 -------------SICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW----------------EKCGNPFKNTSITTLD 218 (455)
T ss_dssp -------------CCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEE
T ss_pred -------------ccChhhhhccccccccccccccCcccccchhhccc----------------cccccccccceeeeEe
Confidence 2333333332 34555555555555433322110 0000112334555555
Q ss_pred eeCcccCCccccccccC---CCCcEEEccCCcCCC----------CCCCccCCc--ccccccccCCccccCCCchhhhcc
Q 002155 372 LGNNQLTGSIPWSLGSL---GGLVKLNLTGNKLSG----------KVPTSFGNL--KELTHLDLSFNELDGQLPSSLSNI 436 (959)
Q Consensus 372 L~~n~l~~~~~~~~~~l---~~L~~L~L~~N~i~~----------~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~l~~l 436 (959)
+++|++++..|..+... ++|+.|++++|.+.+ ..+..+..+ ++|++|++++|.+++..|..+..+
T Consensus 219 Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 298 (455)
T 3v47_A 219 LSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHF 298 (455)
T ss_dssp CTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTC
T ss_pred cCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccC
Confidence 55555554444444332 455555555554332 111222222 345555555555555555555555
Q ss_pred cccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEE
Q 002155 437 LNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYL 516 (959)
Q Consensus 437 ~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 516 (959)
++|+.|++++|++++++ |..|.++++|++|+|++|++++..|..+..+++|++|
T Consensus 299 ~~L~~L~Ls~n~l~~~~--------------------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 352 (455)
T 3v47_A 299 TDLEQLTLAQNEINKID--------------------------DNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVL 352 (455)
T ss_dssp TTCCEEECTTSCCCEEC--------------------------TTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEE
T ss_pred CCCCEEECCCCcccccC--------------------------hhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEE
Confidence 55555555555555433 3344445555555555555554444455555555555
Q ss_pred eCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCC-cccCCCccccccCCCCCCC
Q 002155 517 DVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS-GICQNLSKISLTGNKDLCG 573 (959)
Q Consensus 517 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~ 573 (959)
+|++|++++..|..|..+++|++|++++|+++++++.. ..+++|+.+++++|++.|+
T Consensus 353 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 353 DLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccC
Confidence 55555555444555555555555555555555544433 3344555555555555553
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=381.54 Aligned_cols=400 Identities=26% Similarity=0.273 Sum_probs=219.3
Q ss_pred CCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEe
Q 002155 64 NCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLD 143 (959)
Q Consensus 64 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ 143 (959)
..++|++|++++|.+ +.+|.+|+++++|++|++++|.+++..|..++++++|+.+++..|.. ..+++|+
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~----------~~l~~L~ 77 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD----------RQAHELE 77 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH----------HTCSEEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc----------cCCCEEE
Confidence 468899999999999 58888899999999999999999988888888888888888877753 2477888
Q ss_pred ccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCc
Q 002155 144 LDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDG 223 (959)
Q Consensus 144 ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~ 223 (959)
+++|++++. |.. .++|++|++++|.+++ +|.. +++|++|++++|++++ ++.. .++|++|++++|.+++
T Consensus 78 l~~~~l~~l-p~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~ 145 (454)
T 1jl5_A 78 LNNLGLSSL-PEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK 145 (454)
T ss_dssp CTTSCCSCC-CSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS
T ss_pred ecCCccccC-CCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC
Confidence 888888753 321 2456666666666553 4432 2455555555555553 2211 1455555555555553
Q ss_pred cCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCC
Q 002155 224 IIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYN 303 (959)
Q Consensus 224 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n 303 (959)
+| .++++++|++|++++|+++++ |.. ..+|++|++++|
T Consensus 146 -lp-~~~~l~~L~~L~l~~N~l~~l-p~~---~~~L~~L~L~~n------------------------------------ 183 (454)
T 1jl5_A 146 -LP-ELQNSSFLKIIDVDNNSLKKL-PDL---PPSLEFIAAGNN------------------------------------ 183 (454)
T ss_dssp -CC-CCTTCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSS------------------------------------
T ss_pred -Cc-ccCCCCCCCEEECCCCcCccc-CCC---cccccEEECcCC------------------------------------
Confidence 33 355555555555555555532 221 134455555554
Q ss_pred cCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCcccc
Q 002155 304 RLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPW 383 (959)
Q Consensus 304 ~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 383 (959)
.+++ +| .++.+++|+.|++++|++++ +|.. .++|++|++++|.++ .+| .+..+++|+.|++++|++++ +|.
T Consensus 184 ~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~ 254 (454)
T 1jl5_A 184 QLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPD 254 (454)
T ss_dssp CCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCS
T ss_pred cCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-ccc
Confidence 4443 33 35566666666666666664 2222 246777777777776 344 36677777777777777764 333
Q ss_pred ccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhh
Q 002155 384 SLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAW 463 (959)
Q Consensus 384 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~ 463 (959)
. +++|++|++++|++++ +|.. .++|++|++++|++++ +|.. .++|+.|++++|++++++.. . .
T Consensus 255 ~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~i~~~-~-----~ 317 (454)
T 1jl5_A 255 L---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-LSEL---PPNLYYLNASSNEIRSLCDL-P-----P 317 (454)
T ss_dssp C---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-ESCC---CTTCCEEECCSSCCSEECCC-C-----T
T ss_pred c---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc-ccCc---CCcCCEEECcCCcCCcccCC-c-----C
Confidence 2 3667777777777774 3433 2567777777777764 1211 15677777777777754321 0 1
Q ss_pred hhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCC--CCCccccCCCCccEEe
Q 002155 464 KIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCG--QIPETMCSLSNLLYLS 541 (959)
Q Consensus 464 ~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ 541 (959)
.++.|++++|.+++ +|.. +++|++|++++|+++ .+|. .+++|++|++++|++++ .+|..+..
T Consensus 318 ~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~-------- 381 (454)
T 1jl5_A 318 SLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED-------- 381 (454)
T ss_dssp TCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------
T ss_pred cCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------
Confidence 57777778877775 4543 578999999999998 5676 46889999999999987 56665543
Q ss_pred cccCcCcccCCCCcccCCCccccccCCCCCC
Q 002155 542 LAENRLEGMVPRSGICQNLSKISLTGNKDLC 572 (959)
Q Consensus 542 l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c 572 (959)
++.|.+.+.+|.. +.+|+.+++++|+...
T Consensus 382 L~~n~~~~~i~~~--~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 382 LRMNSHLAEVPEL--PQNLKQLHVETNPLRE 410 (454)
T ss_dssp EECCC--------------------------
T ss_pred hhhcccccccccc--cCcCCEEECCCCcCCc
Confidence 3456777766653 5789999999998654
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-40 Score=358.12 Aligned_cols=283 Identities=37% Similarity=0.621 Sum_probs=227.5
Q ss_pred CccccCHHHHHHHhcCCCCC------CeeccCCCeEEEEEEcCCCCEEEEEEcccc----chhhHHHHHHHHHHHhcCCC
Q 002155 665 PLMRLTLVHILEATNNFCKT------NIIGDGGFGTVYKAALPDGKTVAVKKLSQA----KTQGHREFTAEMETLGKVKH 734 (959)
Q Consensus 665 ~~~~~~~~~~~~~~~~f~~~------~~lg~G~~g~V~~~~~~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~h 734 (959)
+...++..++..++++|... +.||+|+||.||+|+. +++.||||++... .....+.+.+|+.++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 44568889999999998877 8999999999999997 6889999998643 23345678899999999999
Q ss_pred CceeccccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEE
Q 002155 735 QNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNIL 814 (959)
Q Consensus 735 ~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil 814 (959)
|||+++++++..++..++||||+++++|.+++..... ...+++..++.++.|++.||+||| +.|++||||||+||+
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil 165 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANIL 165 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEE
Confidence 9999999999999999999999999999999976432 235899999999999999999999 889999999999999
Q ss_pred ECCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCC
Q 002155 815 LNEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGG 893 (959)
Q Consensus 815 l~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~ 893 (959)
++.++.+||+|||.+......... ......||+.|+|||.+.+ .++.++||||+|+++|||++|..||........
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-- 242 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-- 242 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB--
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH--
Confidence 999999999999999765432221 2234578999999998764 588999999999999999999999976433221
Q ss_pred chHHHHHHHhhcC--ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 894 NLVGWVFQKMKKG--QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 894 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
... +....... ......++ ............+.+++.+||+.||++|||+++++++|+++..
T Consensus 243 -~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 243 -LLD-IKEEIEDEEKTIEDYIDK-KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp -TTH-HHHHHHTTSCCHHHHSCS-SCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred -HHH-HHHHhhhhhhhhhhhccc-cccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 111 11221111 11122222 2234466778889999999999999999999999999999864
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-41 Score=369.39 Aligned_cols=267 Identities=25% Similarity=0.354 Sum_probs=208.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCC----ceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE----EKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv 753 (959)
.++|++.++||+|+||.||+|++. ++.||||++..... ....+..|+.++++++||||+++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 467889999999999999999985 78999999865433 2344567999999999999999999997754 36999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCC----------CeEeCCCCCCCEEECCCCcEEE
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP----------HIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~----------~ivH~dlk~~Nill~~~~~~kl 823 (959)
|||+++|+|.++++.. .+++..++.++.|++.|++||| +. ||+||||||+||+++.++.+||
T Consensus 101 ~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred EecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 9999999999999764 3899999999999999999999 77 9999999999999999999999
Q ss_pred ccccccccccccccc-ccccccccccccCCCcCCCC-----CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCC----
Q 002155 824 ADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSG-----RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGG---- 893 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~---- 893 (959)
+|||+++........ ......||+.|+|||++.+. .++.++|||||||++|||++|+.||..........
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 252 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE 252 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence 999999876543222 22335789999999988763 45678899999999999999999997643321110
Q ss_pred ----chHHHHHHHhhcCccccccCccccC-CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 894 ----NLVGWVFQKMKKGQAADVLDPTVLT-ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 894 ----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.....+......... .+.... .........+.+++.+||+.||++|||++|+++.|++++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 253 IGQHPSLEDMQEVVVHKKK----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp HCSSCCHHHHHHHHTTSCC----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hccCCchhhhhhhhhcccC----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 011111111111111 111111 1123456678999999999999999999999999999863
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-41 Score=357.26 Aligned_cols=257 Identities=26% Similarity=0.425 Sum_probs=212.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.+.||+|+||.||+|+++++..||+|++..... ..+++.+|++++++++||||+++++++..++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 467889999999999999999998888999999875432 3466889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++.... ..+++.+++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+........
T Consensus 86 ~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 86 SNGCLLNYLRSHG---KGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp TTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred CCCcHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 9999999998754 35899999999999999999999 88999999999999999999999999999987654433
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......+|+.|+|||.+.+..++.++||||+|+++|||++ |..||...... .....+..... ...+.
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~--~~~~~- 228 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--------EVVLKVSQGHR--LYRPH- 228 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTCC--CCCCT-
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--------HHHHHHHcCCC--CCCCC-
Confidence 33344456788999999988889999999999999999999 99998643211 11122222111 11111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.....+.+++.+||+.||++|||++|++++|++++.
T Consensus 229 ------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 229 ------LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp ------TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred ------cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 122367889999999999999999999999999864
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-41 Score=374.96 Aligned_cols=260 Identities=30% Similarity=0.466 Sum_probs=210.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC--------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP--------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFD 747 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 747 (959)
.++|++.+.||+|+||.||+|++. ++..||||++.... ....+.+.+|+.+++.+ +||||+++++++..+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467889999999999999999852 35679999997543 34456789999999999 899999999999999
Q ss_pred CceEEEEEeccCCCHHHHHhhhcC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTG------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL 815 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 815 (959)
+..|+||||+++|+|.++++.... ....+++.+++.++.||+.||+||| +.||+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 999999999999999999987542 1235789999999999999999999 8899999999999999
Q ss_pred CCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCC
Q 002155 816 NEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGG 893 (959)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 893 (959)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~---- 312 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---- 312 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH----
Confidence 99999999999999866433221 2233457889999999998999999999999999999999 99998643211
Q ss_pred chHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 894 NLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. +...+..+... . .+..+...+.+++.+||+.||++||++.|+++.|+++.
T Consensus 313 ~----~~~~~~~~~~~-----~----~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 313 E----LFKLLKEGHRM-----D----KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp G----HHHHHHTTCCC-----C----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H----HHHHHhcCCCC-----C----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 22222222111 1 11123346888999999999999999999999999874
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=361.79 Aligned_cols=257 Identities=28% Similarity=0.463 Sum_probs=212.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.+.||+|+||.||+|++.+++.||+|++..... ..+++.+|++++++++||||+++++++.+++..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 357888999999999999999998889999999875432 3467889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++.... ..+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.++.......
T Consensus 88 ~~~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 88 EHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp TTCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCCcHHHHHHhcC---cccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 9999999997654 35889999999999999999999 88999999999999999999999999999987654333
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......+++.|+|||.+.+..++.++||||+|+++|||++ |..||...... .....+..... ...+
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--------~~~~~~~~~~~--~~~~-- 229 (269)
T 4hcu_A 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--------EVVEDISTGFR--LYKP-- 229 (269)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTCC--CCCC--
T ss_pred ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHhcCcc--CCCC--
Confidence 33344567789999999988899999999999999999999 99998643211 12222222211 1111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
......+.+++.+||+.||++||+++|++++|+++..
T Consensus 230 -----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 230 -----RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp -----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 1123467889999999999999999999999999864
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=361.64 Aligned_cols=258 Identities=30% Similarity=0.480 Sum_probs=201.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|++ +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 46788899999999999999987 58899999986543 3345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH--IIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|+++|+|.+++.... ....+++..++.++.|++.||+||| +.| |+||||||+||+++.++.+||+|||+++...
T Consensus 115 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 115 YLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp CCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred cCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 999999999997643 1234889999999999999999999 888 9999999999999999999999999997543
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+..... .
T Consensus 191 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-------~-~~~~~~~~~~----~ 257 (309)
T 3p86_A 191 ST-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-------Q-VVAAVGFKCK----R 257 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-------H-HHHHHHHSCC----C
T ss_pred cc-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------H-HHHHHHhcCC----C
Confidence 22 12233457899999999999999999999999999999999999998653211 1 1111111100 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.. .+......+.+++.+||+.||++|||++++++.|+++.
T Consensus 258 ~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~ 297 (309)
T 3p86_A 258 LE----IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297 (309)
T ss_dssp CC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CC----CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 01 11123346788999999999999999999999999874
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=365.06 Aligned_cols=248 Identities=25% Similarity=0.345 Sum_probs=205.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.+.||+|+||.||+|++ .+|+.||||++... .....+.+.+|+++++.++||||+++++++..++..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35788999999999999999987 47999999998654 3344567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG----RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 9999999999997764 4889999999999999999999 88999999999999999999999999999986643
Q ss_pred ccccccccccccccccCCCcCCCCCCC-CcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRST-TRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
. .......||+.|+|||++.+..++ .++||||+||++|||++|+.||..... . .....+..+... .
T Consensus 167 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~-~~~~~i~~~~~~---~ 233 (328)
T 3fe3_A 167 G--GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-------K-ELRERVLRGKYR---I 233 (328)
T ss_dssp S--CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH-------H-HHHHHHHHCCCC---C
T ss_pred C--CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH-------H-HHHHHHHhCCCC---C
Confidence 2 223456799999999998888775 789999999999999999999965321 1 122222222111 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
| ......+.+++.+||+.||++|||++|++++
T Consensus 234 p-------~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 234 P-------FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp C-------TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred C-------CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1 1123457789999999999999999999864
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-40 Score=362.00 Aligned_cols=261 Identities=24% Similarity=0.336 Sum_probs=213.2
Q ss_pred ccCHHHHHHHhcC----------CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCc
Q 002155 668 RLTLVHILEATNN----------FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN 736 (959)
Q Consensus 668 ~~~~~~~~~~~~~----------f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n 736 (959)
.++..++.++++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.+++.++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 4566777766653 666789999999999999976 79999999997666666677899999999999999
Q ss_pred eeccccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC
Q 002155 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN 816 (959)
Q Consensus 737 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 816 (959)
|+++++++...+..++||||+++++|.+++... .+++..+..++.|++.||+||| +.||+||||||+||+++
T Consensus 104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~ 175 (321)
T 2c30_A 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-----RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLT 175 (321)
T ss_dssp BCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred cceEEEEEEECCEEEEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEC
Confidence 999999999999999999999999999998753 4889999999999999999999 78999999999999999
Q ss_pred CCCcEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchH
Q 002155 817 EEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLV 896 (959)
Q Consensus 817 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~ 896 (959)
.++.+||+|||++....... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... .
T Consensus 176 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-------~ 247 (321)
T 2c30_A 176 LDGRVKLSDFGFCAQISKDV-PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-------V 247 (321)
T ss_dssp TTCCEEECCCTTCEECCSSS-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------H
T ss_pred CCCcEEEeeeeeeeecccCc-cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------H
Confidence 99999999999998765322 223445799999999999999999999999999999999999999864321 1
Q ss_pred HHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 897 GWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ....+........ .........+.+++.+||+.||++|||++|++++
T Consensus 248 ~-~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 248 Q-AMKRLRDSPPPKL-------KNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp H-HHHHHHHSSCCCC-------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred H-HHHHHhcCCCCCc-------CccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1 1222222111111 0111233467889999999999999999999875
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-41 Score=362.47 Aligned_cols=260 Identities=25% Similarity=0.395 Sum_probs=206.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 357889999999999999999865 6899999988543 233456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.... .+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG----PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 99999999999998764 5889999999999999999999 8899999999999999999999999999998765
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
...........||+.|+|||.+.+..++.++||||+|+++|||++|+.||..... .......+....
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-------~~~~~~~~~~~~------ 229 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA-------VSIAIKHIQDSV------ 229 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH-------HHHHHHHHSSCC------
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHhhccC------
Confidence 4333334455799999999999999999999999999999999999999965321 111122222111
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhhh
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-TMLHVLKFLKEIK 957 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~ell~~L~~l~ 957 (959)
+........+....+.+++.+||+.||++|| +++++.+.|+++.
T Consensus 230 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 230 PNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred CCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 1010111122345688899999999999998 9999999998764
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=361.73 Aligned_cols=266 Identities=26% Similarity=0.418 Sum_probs=208.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-----CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceec--CCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-----PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF--DEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~ 750 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 36788899999999999999984 2688999999987766667789999999999999999999998854 3568
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++|+|.+++.... ..+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCG---GGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred EEEEEeCCCCCHHHHHHhcc---cccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 99999999999999998754 35889999999999999999999 8899999999999999999999999999998
Q ss_pred ccccccc--cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc--------cCCchHHHHH
Q 002155 831 LISACET--HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI--------EGGNLVGWVF 900 (959)
Q Consensus 831 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~--------~~~~~~~~~~ 900 (959)
....... .......++..|+|||.+.+..++.++||||+|+++|||++|..||....... ..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHH
Confidence 7643222 11223457778999999988899999999999999999999999986432110 0001111112
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
..+..... ...+..+...+.+++.+||+.||++|||++|+++.|++++.
T Consensus 243 ~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 243 ELLKNNGR---------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHHHTTCC---------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhccCc---------CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 22222111 11122234568889999999999999999999999999864
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-41 Score=367.75 Aligned_cols=257 Identities=26% Similarity=0.412 Sum_probs=207.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.+.||+|+||.||+|++. .+..||||++... .....+.+.+|+.+++.++||||+++++++..++..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 367888999999999999999974 3456999998754 34445678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.++++... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 128 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHD---GQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EeeCCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 999999999999997653 35889999999999999999999 889999999999999999999999999999876
Q ss_pred cccccc--ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 833 SACETH--VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 833 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
...... ......+|+.|+|||++.+..++.++||||+|+++|||++ |..||...... .+...+.....
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~~~~~~~~~~~- 272 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--------DVISSVEEGYR- 272 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--------HHHHHHHTTCC-
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHHcCCC-
Confidence 432221 1223346778999999988889999999999999999999 99998543211 12222222211
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
+. ....+...+.+++.+||+.||++|||++|+++.|+++.
T Consensus 273 ----~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 273 ----LP----APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp ----CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----CC----CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11 11223346888999999999999999999999999875
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-41 Score=378.08 Aligned_cols=258 Identities=26% Similarity=0.394 Sum_probs=209.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 357888999999999999999986 68999999987543 2334568899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++|+|.++++... ..+++.+++.++.|+++|++||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 193 ~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp CCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred cCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 999999999998654 35889999999999999999999 889999999999999999999999999999764322
Q ss_pred ccccc-ccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 836 ETHVS-TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 836 ~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
..... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||..... ..+...+..+...
T Consensus 267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~---- 334 (377)
T 3cbl_A 267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN--------QQTREFVEKGGRL---- 334 (377)
T ss_dssp EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH--------HHHHHHHHTTCCC----
T ss_pred ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCC----
Confidence 11111 11235778999999988889999999999999999998 9999864321 1122222222111
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
. .+..+...+.+++.+||+.||++|||++++++.|++++.
T Consensus 335 -~----~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 335 -P----CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp -C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -C----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 1 111233467889999999999999999999999999863
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-40 Score=360.88 Aligned_cols=249 Identities=22% Similarity=0.318 Sum_probs=205.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.++||+|+||.||+|+.+ +|+.||+|++... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 367889999999999999999875 6899999998754 233456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++|+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++++||+|||+++...
T Consensus 84 ~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 99999999999998654 5889999999999999999999 8899999999999999999999999999997643
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..+...+...... .
T Consensus 157 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~---~ 224 (337)
T 1o6l_A 157 SD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------ERLFELILMEEIR---F 224 (337)
T ss_dssp CT-TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCC---C
T ss_pred cC-CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCC---C
Confidence 22 2223456799999999999999999999999999999999999999864321 1122222221110 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
| ......+.+++.+||+.||++|| +++|++++
T Consensus 225 p-------~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 225 P-------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp C-------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred C-------CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 1 12234678899999999999999 89999865
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=357.84 Aligned_cols=273 Identities=21% Similarity=0.264 Sum_probs=213.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCC--ceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE--EKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv 753 (959)
.++|++.++||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 357889999999999999999976 58999999987543 334566789999999999999999999987655 77999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE----CCCCcEEEcccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL----NEEFEAKVADFGLA 829 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfg~~ 829 (959)
|||+++++|.+++...... ..+++.+++.++.|++.||+||| +.||+||||||+||++ +.++.+||+|||++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNA-YGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EECCTTCBHHHHHHSGGGT-TCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EeCCCCCCHHHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 9999999999999875422 23899999999999999999999 8899999999999999 78888999999999
Q ss_pred cccccccccccccccccccccCCCcCC--------CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHH
Q 002155 830 RLISACETHVSTDIAGTFGYIPPEYGQ--------SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
+...... ......||+.|+|||++. +..++.++||||+||++|||++|+.||...............+..
T Consensus 164 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 164 RELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp EECCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred eecCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 8765322 223457899999999865 577899999999999999999999999654333222222222222
Q ss_pred HhhcCcccc----------cc-CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 902 KMKKGQAAD----------VL-DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 902 ~~~~~~~~~----------~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
......... +. ...............+.+++.+||+.||++|||++|++++..+-
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 111100000 00 00111234577888899999999999999999999999998764
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-41 Score=360.39 Aligned_cols=256 Identities=24% Similarity=0.409 Sum_probs=208.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.+.||+|+||.||+|++.++..||+|++..... ..+++.+|++++++++||||+++++++..++..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 467888999999999999999998888999999975432 3467889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++.... ..+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||.++.......
T Consensus 102 ~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 175 (283)
T 3gen_A 102 ANGCLLNYLREMR---HRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175 (283)
T ss_dssp TTCBHHHHHHCGG---GCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred CCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence 9999999998643 35889999999999999999999 88999999999999999999999999999987654333
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...... .....+..... ...+
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~~~~--~~~~-- 243 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--------ETAEHIAQGLR--LYRP-- 243 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTCC--CCCC--
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--------HHHHHHhcccC--CCCC--
Confidence 33334457789999999988889999999999999999998 99998643211 11222222211 1111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
......+.+++.+||+.||++|||++|++++|+++.
T Consensus 244 -----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 244 -----HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp -----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 111246788999999999999999999999999885
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=372.69 Aligned_cols=257 Identities=26% Similarity=0.443 Sum_probs=198.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.+.||+|+||.||+|++. ++..||||++... .....+.+.+|+.++++++||||+++++++..++..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357999999999999999999864 5778999998754 33445678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.++++... ..+++.+++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 124 v~e~~~~~sL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EEECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 999999999999998653 35889999999999999999999 789999999999999999999999999999876
Q ss_pred ccccccc--cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 833 SACETHV--STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 833 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
....... .....+++.|+|||++.+..++.++|||||||++||+++ |+.||...... .+...+..+...
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--------~~~~~i~~~~~~ 269 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--------DVIKAVDEGYRL 269 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--------HHHHHHHTTEEC
T ss_pred ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCC
Confidence 4322211 112235678999999988899999999999999999998 99998643211 122222222110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.....+...+.+++.+||+.||++||+++++++.|+++.
T Consensus 270 ---------~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 270 ---------PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp ---------CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 111223456889999999999999999999999999874
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-40 Score=362.65 Aligned_cols=252 Identities=23% Similarity=0.296 Sum_probs=205.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh------hHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ------GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++...... ..+.+.+|+.++++++||||+++++++..++..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467899999999999999999875 6899999998754321 346788999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC----cEEEccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF----EAKVADF 826 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Df 826 (959)
++||||+++|+|.+++.... .+++..+..++.||+.|++||| +.||+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS----CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 99999999999999997643 5889999999999999999999 88999999999999998876 7999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
|++...... .......||+.|+|||++.+..++.++||||+||++|+|++|..||...... .....+...
T Consensus 164 G~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~--------~~~~~i~~~ 233 (361)
T 2yab_A 164 GLAHEIEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANITAV 233 (361)
T ss_dssp SSCEECCTT--CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTT
T ss_pred CCceEcCCC--CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhc
Confidence 999876532 2234457999999999999989999999999999999999999999653211 112222221
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. .+++.... .....+.+++.+||..||++|||++|++++
T Consensus 234 ~~--~~~~~~~~----~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 234 SY--DFDEEFFS----QTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp CC--CCCHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CC--CCCchhcc----CCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11 01111111 123457789999999999999999999863
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-40 Score=367.09 Aligned_cols=256 Identities=21% Similarity=0.309 Sum_probs=203.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.++||+|+||+||+|+.+ +++.||+|++++.. ....+.+..|..++.++ +||||+++++++.+++..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467999999999999999999876 57899999987543 22234577899999887 89999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+|||++.++++||+|||+++..
T Consensus 131 V~E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEcCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 999999999999998754 5899999999999999999999 889999999999999999999999999999753
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc-cCCchHHHHHHHhhcCccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI-EGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.. ........+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ........+.+.+......
T Consensus 204 ~~-~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~-- 280 (396)
T 4dc2_A 204 LR-PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-- 280 (396)
T ss_dssp CC-TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC--
T ss_pred cc-CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC--
Confidence 32 2223345689999999999999999999999999999999999999996432211 1122223333333332111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM------LHVLK 951 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~------~ell~ 951 (959)
. +......+.+++.+||+.||++||++ +|+++
T Consensus 281 -~-------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 281 -I-------PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp -C-------CTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred -C-------CCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 0 11133467889999999999999986 56655
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-40 Score=358.32 Aligned_cols=263 Identities=24% Similarity=0.327 Sum_probs=202.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||+||+|++.+|+.||+|++.... ......+.+|++++++++||||+++++++..++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46789999999999999999999889999999986543 2234568899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++ ++.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 100 FMEK-DLKKVLDENK---TGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp CCSE-EHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred CCCC-CHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 9985 8888887644 35889999999999999999999 889999999999999999999999999999876432
Q ss_pred cccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc---
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV--- 911 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 911 (959)
. .......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...... +....+...........+
T Consensus 173 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~ 247 (311)
T 3niz_A 173 V-RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD----DQLPKIFSILGTPNPREWPQV 247 (311)
T ss_dssp C-C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT----THHHHHHHHHCCCCTTTSGGG
T ss_pred c-ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHHHCCCChHHhhhh
Confidence 2 22234568999999998766 56899999999999999999999999654322 222222222211111100
Q ss_pred -------------cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 -------------LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 -------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
................+.+++.+||+.||++|||++|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp TTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00000000011123467899999999999999999999874
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-40 Score=365.87 Aligned_cols=256 Identities=25% Similarity=0.318 Sum_probs=205.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-----hhhHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-----TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
.++|++.+.||+|+||.||+|+.+ +++.||||++.... ....+.+.+|+.+++.++||||+++++++..++..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 357899999999999999999865 68999999986432 123567899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc---EEEccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE---AKVADFGL 828 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~ 828 (959)
+||||+++|+|.+++.........+++..++.++.||+.||+||| +.||+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999888765433345899999999999999999999 889999999999999986654 99999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
+....... .......||+.|+|||++.+..++.++||||+||++|||++|..||..... .....+.....
T Consensus 180 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~i~~~~~ 249 (351)
T 3c0i_A 180 AIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---------RLFEGIIKGKY 249 (351)
T ss_dssp CEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---------HHHHHHHHTCC
T ss_pred eeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---------HHHHHHHcCCC
Confidence 98765322 223445799999999999999999999999999999999999999965311 11222222111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ..+.... .....+.+++.+||+.||++|||+.|++++
T Consensus 250 ~--~~~~~~~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 250 K--MNPRQWS----HISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp C--CCHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C--CCccccc----cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 1111001 123467889999999999999999999863
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-40 Score=359.45 Aligned_cols=246 Identities=22% Similarity=0.340 Sum_probs=201.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|++ .+++.||||++.... ......+.+|+.+++.++||||+++++++..++..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788999999999999999996 478999999986432 223457889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+ +|+|.+++.... .+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 89 E~~-~g~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK----RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp CCC-CEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred ECC-CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 999 679999887654 5889999999999999999999 78999999999999999999999999999986643
Q ss_pred ccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
. .......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||......... ..+... ..
T Consensus 161 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~--------~~i~~~---~~-- 225 (336)
T 3h4j_B 161 G--NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF--------KKVNSC---VY-- 225 (336)
T ss_dssp S--BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB--------CCCCSS---CC--
T ss_pred C--cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH--------HHHHcC---CC--
Confidence 2 22344579999999999988776 78999999999999999999999654222100 000000 00
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..+......+.+++.+||+.||.+|||++|++++
T Consensus 226 -----~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 226 -----VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp -----CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred -----CCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 0111233467889999999999999999999864
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=369.81 Aligned_cols=254 Identities=24% Similarity=0.324 Sum_probs=205.7
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
-.++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 3567999999999999999999864 68999999986543 33456688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC---CCCcEEEccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN---EEFEAKVADFGLAR 830 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~~~ 830 (959)
|||+++|+|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++ .++.+||+|||++.
T Consensus 89 ~E~~~gg~L~~~i~~~~----~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE----YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp ECCCBCCBHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEeCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 99999999999998754 5889999999999999999999 88999999999999998 46789999999997
Q ss_pred ccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
...... .......||+.|+|||++.+..++.++||||+||++|+|++|.+||..... ..+...+..+....
T Consensus 162 ~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~--------~~~~~~i~~~~~~~ 232 (444)
T 3soa_A 162 EVEGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ--------HRLYQQIKAGAYDF 232 (444)
T ss_dssp CCCTTC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTCCCC
T ss_pred EecCCC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH--------HHHHHHHHhCCCCC
Confidence 765322 223446799999999999998999999999999999999999999864321 11223333222111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+ .+........+.+++.+||+.||++|||++|++++
T Consensus 233 ---~---~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 233 ---P---SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ---C---TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---C---ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0 11112233467889999999999999999999874
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-40 Score=355.57 Aligned_cols=264 Identities=27% Similarity=0.397 Sum_probs=202.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhc--CCCCceeccccceec----CCceE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGK--VKHQNLVPLLGYCSF----DEEKL 751 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~----~~~~~ 751 (959)
.++|++.+.||+|+||.||+|++ +++.||||++.... ...+..|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46899999999999999999998 68999999986532 3345556666655 799999999998644 34579
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF-----TPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
+||||+++|+|.++++.. .+++..++.++.|++.|++|||... +.+|+||||||+||+++.++.+||+||
T Consensus 83 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EEECCCTTCBHHHHHTTC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCC
T ss_pred EehhhccCCCHHHHHhhc-----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeC
Confidence 999999999999999643 4899999999999999999999321 469999999999999999999999999
Q ss_pred ccccccccccccc---cccccccccccCCCcCCCC------CCCCcCcchhHHHHHHHHHhC----------CCCCCCCC
Q 002155 827 GLARLISACETHV---STDIAGTFGYIPPEYGQSG------RSTTRGDVYSFGVILLELVTG----------KEPTGPEF 887 (959)
Q Consensus 827 g~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg----------~~p~~~~~ 887 (959)
|+++......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9997654332221 2334789999999988776 445789999999999999999 77775433
Q ss_pred ccccCCchHHHHHHHhhcCccccccCcccc-CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 888 KDIEGGNLVGWVFQKMKKGQAADVLDPTVL-TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.... ............. ..+... ..........+.+++.+||+.||++|||++|+++.|+++.
T Consensus 238 ~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 301 (301)
T 3q4u_A 238 PNDP---SFEDMRKVVCVDQ----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 301 (301)
T ss_dssp CSSC---CHHHHHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHC
T ss_pred CCCc---chhhhhHHHhccC----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhccC
Confidence 3211 1111222221111 111111 1122356678999999999999999999999999999873
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=369.23 Aligned_cols=261 Identities=29% Similarity=0.399 Sum_probs=209.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|++. +++.||||++... .......+.+|+.++++++||||+++++++..+...
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 367888999999999999999853 4678999998654 344455688999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCC---ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC---cEEEc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF---EAKVA 824 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~ 824 (959)
++||||+++|+|.++++..... ...+++.+++.++.|+++||+||| +.||+||||||+||+++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 9999999999999999876532 235889999999999999999999 88999999999999999554 59999
Q ss_pred ccccccccccccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHH
Q 002155 825 DFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 825 Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||..... ..+...
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--------~~~~~~ 298 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--------QEVLEF 298 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHHH
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHH
Confidence 9999976533222 22233467899999999988899999999999999999998 9999864321 112222
Q ss_pred hhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
+..+.... ....+...+.+++.+||+.||++||++.+++++|+.+..
T Consensus 299 i~~~~~~~---------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 299 VTSGGRMD---------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHcCCCCC---------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 22221111 111223467889999999999999999999999988753
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=380.98 Aligned_cols=256 Identities=28% Similarity=0.447 Sum_probs=209.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.+.||+|+||.||+|+++++..||||+++... ...+.+.+|+.++++++||||+++++++. ++..++||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 46788899999999999999999888999999987543 34678999999999999999999999986 66789999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++|+|.++++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 265 ~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 265 AKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp TTCBHHHHHHSHHH--HTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred CCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 99999999986431 24788899999999999999999 88999999999999999999999999999987643222
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......++..|+|||++....++.++|||||||++|||++ |+.||..... ..+...+..+... .
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~--------~~~~~~i~~~~~~-----~- 405 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--------PEVIRALERGYRM-----P- 405 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHHHHHHTCCC-----C-
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCC-----C-
Confidence 22233456789999999988899999999999999999999 9999864321 1122222222111 1
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+..+...+.+++.+||+.||++|||+++|++.|+++.
T Consensus 406 ---~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 406 ---RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred ---CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 11223456889999999999999999999999999874
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-40 Score=355.24 Aligned_cols=256 Identities=23% Similarity=0.367 Sum_probs=196.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC----CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD----GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.+.||+|+||.||+|++.. +..||+|++.... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4678889999999999999998743 4579999987543 334567889999999999999999999884 567899
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++++|.+++.... ..+++..++.++.|++.||+||| +.|++||||||+||+++.++.+||+|||+++..
T Consensus 93 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEECCTTEEHHHHHHHTT---TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECcccccccc
Confidence 999999999999998654 35889999999999999999999 889999999999999999999999999999876
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
............+++.|+|||++.+..++.++||||+|+++|||++ |..||...... ... ..+......
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~----~~~----~~i~~~~~~-- 236 (281)
T 1mp8_A 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVI----GRIENGERL-- 236 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHH----HHHHTTCCC--
T ss_pred CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH----HHH----HHHHcCCCC--
Confidence 5433333334456789999999988889999999999999999997 89998653221 121 222221111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.. .......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 237 ---~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 237 ---PM----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp ---CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11 1123346788999999999999999999999999874
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-40 Score=363.44 Aligned_cols=248 Identities=26% Similarity=0.366 Sum_probs=199.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.++||+|+||.||+|+.+ +|+.||||++... .....+.+.+|..+++.+ +||||+++++++..++..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 468999999999999999999875 6899999998754 233455677899999988 69999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.... .+++..++.++.||+.||+||| +.||+||||||+||+++.++++||+|||+++..
T Consensus 102 v~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR----RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 999999999999998754 5899999999999999999999 889999999999999999999999999999754
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
.. ........+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .+...+......
T Consensus 175 ~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~~~~--- 242 (353)
T 3txo_A 175 IC-NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED--------DLFEAILNDEVV--- 242 (353)
T ss_dssp CC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCC---
T ss_pred cc-CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCC---
Confidence 32 122334567999999999998888999999999999999999999999653221 122222222111
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM------LHVLK 951 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~------~ell~ 951 (959)
.| ......+.+++.+|++.||++||++ +|+++
T Consensus 243 ~p-------~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 243 YP-------TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CC-------TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CC-------CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 11 1123457789999999999999998 77765
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=352.64 Aligned_cols=256 Identities=28% Similarity=0.452 Sum_probs=211.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
++|++.+.||+|+||.||+|++.+++.||+|++..... ..+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 57888999999999999999998888999999875433 34678899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+++|.+++.... ..+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+.........
T Consensus 87 ~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 160 (267)
T 3t9t_A 87 HGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 160 (267)
T ss_dssp TCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCcHHHHHhhCc---ccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccccc
Confidence 999999998754 35789999999999999999999 889999999999999999999999999999876433222
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......+++.|+|||+..+..++.++||||+|+++|||++ |+.||..... ......+...... ..+
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~i~~~~~~--~~~--- 227 (267)
T 3t9t_A 161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--------SEVVEDISTGFRL--YKP--- 227 (267)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTTCCC--CCC---
T ss_pred ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH--------HHHHHHHhcCCcC--CCC---
Confidence 2334457789999999988889999999999999999999 8999864321 1122222222110 111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
......+.+++.+||+.||++||++++++++|+++..
T Consensus 228 ----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 228 ----RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp ----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1123467889999999999999999999999999864
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-40 Score=369.68 Aligned_cols=257 Identities=23% Similarity=0.268 Sum_probs=205.8
Q ss_pred HHHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 674 ILEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 674 ~~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
+....++|++.++||+|+||.||+|+.+ +++.||+|++.+.. ....+.+.+|+.+++.++||||+++++++.+++.
T Consensus 64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 143 (410)
T 3v8s_A 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 143 (410)
T ss_dssp HSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE
Confidence 3345678999999999999999999876 58899999986532 2223457789999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.|+||||++||+|.++++.. .+++..+..++.||+.||+||| +.||+||||||+||+++.++++||+|||++
T Consensus 144 ~~lV~E~~~gg~L~~~l~~~-----~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a 215 (410)
T 3v8s_A 144 LYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTC 215 (410)
T ss_dssp EEEEECCCTTEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEeCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEecccee
Confidence 99999999999999999764 3788999999999999999999 889999999999999999999999999999
Q ss_pred cccccccccccccccccccccCCCcCCCCC----CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhc
Q 002155 830 RLISACETHVSTDIAGTFGYIPPEYGQSGR----STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK 905 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (959)
+.............+||+.|+|||++.+.. ++.++||||+||++|||++|+.||...... .. ...+..
T Consensus 216 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-------~~-~~~i~~ 287 (410)
T 3v8s_A 216 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-------GT-YSKIMN 287 (410)
T ss_dssp EECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HH-HHHHHT
T ss_pred EeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh-------hH-HHHHHh
Confidence 876544333344668999999999887665 789999999999999999999999653211 11 111111
Q ss_pred CccccccCccccCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 002155 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAM--RPTMLHVLKF 952 (959)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~ell~~ 952 (959)
.... ...|. .......+.+++.+|+..+|.+ ||+++||+++
T Consensus 288 ~~~~-~~~p~-----~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 288 HKNS-LTFPD-----DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HHHH-CCCCT-----TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred cccc-ccCCC-----cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 1000 00010 0112346778999999999998 9999999875
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-40 Score=365.04 Aligned_cols=262 Identities=29% Similarity=0.466 Sum_probs=211.8
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
..++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+.++++++||||+++++++..++.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 4578999999999999999999874 34789999997543 3345678999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCC--------------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCC
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGS--------------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIK 809 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~--------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk 809 (959)
.++||||+++|+|.++++..... ...+++.+++.++.||++||+||| +.||+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 99999999999999999874321 146899999999999999999999 8899999999
Q ss_pred CCCEEECCCCcEEEcccccccccccccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCC
Q 002155 810 ASNILLNEEFEAKVADFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEF 887 (959)
Q Consensus 810 ~~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~ 887 (959)
|+||+++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999976543222 12234467889999999888889999999999999999999 999986432
Q ss_pred ccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 888 KDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
. ..+...+..+.... .+..+...+.+++.+||+.||++||++.++++.|+++..
T Consensus 282 ~--------~~~~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 282 H--------EEVIYYVRDGNILA---------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp H--------HHHHHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred h--------HHHHHHHhCCCcCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 1 11222233222111 111233468889999999999999999999999998853
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=356.01 Aligned_cols=252 Identities=20% Similarity=0.284 Sum_probs=205.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|++. +++.||+|.+... ......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 467889999999999999999875 5889999998643 33455688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC--CCcEEEccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE--EFEAKVADFGLARLISA 834 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~~~~ 834 (959)
+++|+|.+++.... ..+++.+++.++.|++.|++||| +.||+||||||+||+++. ++.+||+|||+++....
T Consensus 83 ~~g~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 83 ISGLDIFERINTSA---FELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCCBHHHHHTSSS---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred CCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 99999999997643 35889999999999999999999 889999999999999987 78999999999987643
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
.. ......||+.|+|||++.+..++.++||||+||++|||++|..||...... . ....+...... ..+
T Consensus 157 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~-~~~~i~~~~~~--~~~ 224 (321)
T 1tki_A 157 GD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-------Q-IIENIMNAEYT--FDE 224 (321)
T ss_dssp TC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-------H-HHHHHHHTCCC--CCH
T ss_pred CC--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-------H-HHHHHHcCCCC--CCh
Confidence 22 223456899999999999888999999999999999999999999653211 1 12222221110 000
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... ......+.+++.+||..||++|||+.|++++
T Consensus 225 ~~~----~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 225 EAF----KEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHH----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhh----ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000 1123467899999999999999999999874
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=351.09 Aligned_cols=262 Identities=26% Similarity=0.326 Sum_probs=199.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|++.+.||+|+||.||+|+..+|+.||+|++.... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5788899999999999999998889999999986433 22346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++ +|.+++.... ..+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||.++......
T Consensus 82 ~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHTST---TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 986 9999887643 35788999999999999999999 8899999999999999999999999999997654321
Q ss_pred ccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc----
Q 002155 837 THVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV---- 911 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 911 (959)
.......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .....+...........+
T Consensus 155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T 1ob3_A 155 -RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA----DQLMRIFRILGTPNSKNWPNVT 229 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCTTTSTTGG
T ss_pred -cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHHCCCChhhchhhh
Confidence 122334689999999988654 5899999999999999999999998653211 111111111111100000
Q ss_pred ----cCccc-------cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 ----LDPTV-------LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ----~~~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.++.. ...........+.+++.+||+.||++|||++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp GSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 001112234567899999999999999999999864
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-39 Score=357.21 Aligned_cols=256 Identities=21% Similarity=0.317 Sum_probs=204.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 753 (959)
++|++.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|..+++++ +||||+++++++.+++..|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57888999999999999999975 58899999987542 33345678899999988 899999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++|+|.+++.... .+++..++.++.||+.||+||| +.||+||||||+||+++.++++||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 99999999999998654 5889999999999999999999 8899999999999999999999999999997543
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc-cCCchHHHHHHHhhcCcccccc
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI-EGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
.. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ........+.+.+......
T Consensus 162 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~--- 237 (345)
T 3a8x_A 162 RP-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--- 237 (345)
T ss_dssp CT-TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC---
T ss_pred CC-CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC---
Confidence 22 222345679999999999999999999999999999999999999996432111 1111222233333322111
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM------LHVLKF 952 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~------~ell~~ 952 (959)
.| ......+.+++.+||+.||++||++ +|++++
T Consensus 238 ~p-------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 238 IP-------RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp CC-------TTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred CC-------CCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 01 1233467889999999999999996 666643
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=360.34 Aligned_cols=249 Identities=24% Similarity=0.354 Sum_probs=202.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.++||+|+||.||+|+.. +++.||+|++.... ......+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 57889999999999999999865 58899999986532 334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+.+|+|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 95 e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV----HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp CCCTTEEHHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 9999999999998643 5889999999999999999999 88999999999999999999999999999987643
Q ss_pred ccccccccccccccccCCCcCCC---CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQS---GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .. ......+.....
T Consensus 168 --~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~----~~-~~~~~~~~~~~~--- 237 (384)
T 4fr4_A 168 --ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST----SS-KEIVHTFETTVV--- 237 (384)
T ss_dssp --TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS----CH-HHHHHHHHHCCC---
T ss_pred --CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc----cH-HHHHHHHhhccc---
Confidence 223345689999999999864 45899999999999999999999999653221 11 112222221111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT-MLHVLK 951 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~ell~ 951 (959)
..+..+...+.+++.+||+.||++||+ ++++++
T Consensus 238 -------~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 -------TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -------CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -------CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 011123356888999999999999998 677654
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-40 Score=358.75 Aligned_cols=261 Identities=30% Similarity=0.444 Sum_probs=211.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc------CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL------PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+++++.++||||+++++++..++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 46788899999999999999985 245789999987543 34456788999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcC--------------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCC
Q 002155 751 LLVYEYMVNGSLDLWLRNRTG--------------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKA 810 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 810 (959)
++||||+++|+|.+++..... ....+++.+++.++.|+++||+||| +.||+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence 999999999999999987542 1234889999999999999999999 88999999999
Q ss_pred CCEEECCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCc
Q 002155 811 SNILLNEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFK 888 (959)
Q Consensus 811 ~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~ 888 (959)
+||+++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||+|+++|||++ |..||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999866433222 1233457889999999888889999999999999999999 9999865322
Q ss_pred cccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 889 DIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
. . +...+...... . ........+.+++.+||+.||++||+++|++++|+++..
T Consensus 259 ~----~----~~~~~~~~~~~-----~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 259 E----R----LFNLLKTGHRM-----E----RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp G----G----HHHHHHTTCCC-----C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H----H----HHHHhhcCCcC-----C----CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1 1 22222222111 1 111233468889999999999999999999999999854
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=355.13 Aligned_cols=252 Identities=22% Similarity=0.316 Sum_probs=204.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch------hhHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT------QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|+.+++.++||||+++++++..+...
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 456889999999999999999875 689999999865332 1356789999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC----cEEEccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF----EAKVADF 826 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Df 826 (959)
++||||+++|+|.+++.... .+++.+++.++.|++.||+||| +.||+||||||+||+++.++ .+||+||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS----CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEcCCCCCHHHHHHhcC----CcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 99999999999999997543 5889999999999999999999 88999999999999998887 8999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
|+++...... ......||+.|+|||++.+..++.++||||+||++|||++|..||...... . ....+...
T Consensus 163 g~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~-~~~~~~~~ 232 (326)
T 2y0a_A 163 GLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-------E-TLANVSAV 232 (326)
T ss_dssp TTCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-------H-HHHHHHHT
T ss_pred CCCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-------H-HHHHHHhc
Confidence 9998764322 223457999999999999899999999999999999999999998643211 1 11111111
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ...+.... .....+.+++.+||+.||++|||++|++++
T Consensus 233 ~~--~~~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 233 NY--EFEDEYFS----NTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CC--CCCHHHHT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CC--CcCccccc----cCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 10 00000001 123457789999999999999999999874
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=362.00 Aligned_cols=252 Identities=24% Similarity=0.351 Sum_probs=205.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.+.||+|+||.||+|.++ +|+.||+|++... .....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999999999875 6899999998653 2334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC---CcEEEcccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE---FEAKVADFGLARL 831 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~~ 831 (959)
||+++|+|.+++.... .+++.+++.++.||+.||+||| +.||+||||||+||+++.+ +.+||+|||++..
T Consensus 108 e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 108 DLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp CCCCSCBHHHHHTTCS----CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 9999999999987643 5889999999999999999999 8899999999999999865 4599999999987
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.... .......||+.|+|||++.+..++.++||||+||++|||++|.+||..... ..+...+..+....
T Consensus 181 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--------~~~~~~i~~~~~~~- 249 (362)
T 2bdw_A 181 VNDS--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--------HRLYAQIKAGAYDY- 249 (362)
T ss_dssp CTTC--CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCC-
T ss_pred ecCC--cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhCCCCC-
Confidence 6532 223346799999999999998999999999999999999999999864321 11222222221110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+ ..........+.+++.+||+.||++||++.|++++
T Consensus 250 --~---~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 --P---SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp --C---TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred --C---cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 01112233467889999999999999999999865
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-40 Score=372.86 Aligned_cols=261 Identities=24% Similarity=0.268 Sum_probs=207.5
Q ss_pred HHHHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCC
Q 002155 673 HILEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE 748 (959)
Q Consensus 673 ~~~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 748 (959)
++....++|++.++||+|+||+||+|+++ +++.||+|++.+.. ......+.+|..+++.++||||++++++|.+++
T Consensus 68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 147 (437)
T 4aw2_A 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN 147 (437)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC
Confidence 34445688999999999999999999976 47899999987532 122234788999999999999999999999999
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..|+||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+|||++.++.+||+|||+
T Consensus 148 ~~~lV~Ey~~gg~L~~~l~~~~---~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 148 NLYLVMDYYVGGDLLTLLSKFE---DRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp EEEEEECCCTTCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEecCCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhh
Confidence 9999999999999999998643 35899999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCC-----CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHh
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQ-----SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKM 903 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (959)
++.............+||+.|+|||++. ...++.++||||+||++|||++|+.||...... +....+....
T Consensus 222 a~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~----~~~~~i~~~~ 297 (437)
T 4aw2_A 222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV----ETYGKIMNHK 297 (437)
T ss_dssp CEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHHHTHH
T ss_pred hhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh----HHHHhhhhcc
Confidence 9876544444444568999999999876 567899999999999999999999999653211 1111111110
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAM--RPTMLHVLKF 952 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~ell~~ 952 (959)
.. ...|... ......+.+++.+|+..+|++ ||+++|++++
T Consensus 298 ~~-----~~~p~~~----~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 298 ER-----FQFPTQV----TDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HH-----CCCCSSC----CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred cc-----ccCCccc----ccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 00 0011111 112345778999999888888 9999999874
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-39 Score=351.77 Aligned_cols=246 Identities=23% Similarity=0.325 Sum_probs=204.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++.... ....+.+.+|..+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 357889999999999999999875 68999999987542 23456678899999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++|+|.++++... .+++..+..++.||+.||+||| +.||+||||||+||+++.++++||+|||+++...
T Consensus 85 ~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ----RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp ECCCCSCBHHHHHHHTS----SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EeCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 99999999999998654 5889999999999999999999 8999999999999999999999999999998654
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
. ......||+.|+|||++.+..++.++||||+||++|||++|..||..... ... ...+..... ..
T Consensus 158 ~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~-~~~i~~~~~---~~ 222 (318)
T 1fot_A 158 D----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-------MKT-YEKILNAEL---RF 222 (318)
T ss_dssp S----CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-------HHH-HHHHHHCCC---CC
T ss_pred C----ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-------HHH-HHHHHhCCC---CC
Confidence 2 22345799999999999999999999999999999999999999964321 111 122222111 01
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
| ......+.+++.+|+..||++|| +++|++++
T Consensus 223 p-------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 223 P-------PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp C-------TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred C-------CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 1 11234678899999999999999 88998754
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-40 Score=382.08 Aligned_cols=257 Identities=26% Similarity=0.415 Sum_probs=211.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC-CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|+++. +..||||++.... ...+++.+|+.++++++||||++++++|..++..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 3568888999999999999999764 8899999997543 3457799999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++|+|.++++.... ..+++..++.++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++......
T Consensus 298 ~~~g~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 372 (495)
T 1opk_A 298 MTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372 (495)
T ss_dssp CTTCBHHHHHHHSCT--TTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred cCCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence 999999999986432 35889999999999999999999 8899999999999999999999999999998765333
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
........++..|+|||++.+..++.++|||||||++|||++ |..||...... . +.+.+...... .
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~----~----~~~~~~~~~~~-----~ 439 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----Q----VYELLEKDYRM-----E 439 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----G----HHHHHHTTCCC-----C
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH----H----HHHHHHcCCCC-----C
Confidence 222333456789999999988889999999999999999999 88998643211 1 22222222111 1
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+..+...+.+++.+||+.||++|||++++++.|+++.
T Consensus 440 ----~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 440 ----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred ----CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 11223356788999999999999999999999999874
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-40 Score=367.29 Aligned_cols=260 Identities=30% Similarity=0.449 Sum_probs=211.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC--------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP--------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFD 747 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 747 (959)
.++|.+.+.||+|+||.||+|++. ++..||||++.... ......+.+|+++++++ +||||+++++++..+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 467889999999999999999852 24579999987543 34456788999999999 899999999999999
Q ss_pred CceEEEEEeccCCCHHHHHhhhcCC------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTGS------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL 815 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 815 (959)
+..++||||+++|+|.+++...... ...+++.+++.++.|++.||+||| +.||+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEE
Confidence 9999999999999999999875421 235899999999999999999999 8899999999999999
Q ss_pred CCCCcEEEcccccccccccccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCC
Q 002155 816 NEEFEAKVADFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGG 893 (959)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 893 (959)
+.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~----- 299 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV----- 299 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----
Confidence 9999999999999986643222 22233467889999999999999999999999999999999 9999864321
Q ss_pred chHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 894 NLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..+...+........ ...+...+.+++.+||+.||++|||++|++++|+++.
T Consensus 300 ---~~~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 300 ---EELFKLLKEGHRMDK---------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp ---HHHHHHHHTTCCCCC---------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHHHHHHHcCCCCCC---------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 122333333221111 1122346888999999999999999999999999874
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=373.14 Aligned_cols=252 Identities=29% Similarity=0.454 Sum_probs=206.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCC-ceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE-EKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|.+. |+.||||+++... ..+.+.+|++++++++||||+++++++.... ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 357888999999999999999985 7899999997543 4567899999999999999999999986655 78999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++|+|.++++.... ..+++..++.++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST- 342 (450)
T ss_dssp CTTCBHHHHHHHHCT--TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred cCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-
Confidence 999999999987642 24688999999999999999999 889999999999999999999999999999754321
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
.....+++.|+|||.+.+..++.++|||||||++|||++ |+.||..... .+. ...+..+.. +.
T Consensus 343 ---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~----~~~----~~~i~~~~~-----~~ 406 (450)
T 1k9a_A 343 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL----KDV----VPRVEKGYK-----MD 406 (450)
T ss_dssp -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT----TTH----HHHHHTTCC-----CC
T ss_pred ---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH----HHH----HHHHHcCCC-----CC
Confidence 122356889999999999999999999999999999998 9999864322 122 222222211 11
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.+..+...+.+++.+||+.||++|||+.++++.|++++.
T Consensus 407 ----~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 407 ----APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 112234568889999999999999999999999998853
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=359.66 Aligned_cols=249 Identities=23% Similarity=0.345 Sum_probs=203.5
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 751 (959)
..++|++.++||+|+||.||+|+.+ +|+.||+|+++... ....+.+..|..+++.+ +||||+++++++.+++..|
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 4578999999999999999999975 68899999987542 23445677899998877 8999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||+++|+|.+++.... .+++.++..++.|++.||+||| +.||+||||||+||+++.++++||+|||+++.
T Consensus 95 lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCH----KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 9999999999999998754 5889999999999999999999 88999999999999999999999999999975
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.... .......+||+.|+|||++.+..++.++||||+||++|||++|..||..... ..+...+.....
T Consensus 168 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~--- 235 (345)
T 1xjd_A 168 NMLG-DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--------EELFHSIRMDNP--- 235 (345)
T ss_dssp CCCT-TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCC---
T ss_pred cccC-CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHhCCC---
Confidence 4322 2223456899999999999999999999999999999999999999964321 112222222211
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTML-HVLK 951 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~-ell~ 951 (959)
.. +......+.+++.+||+.||++||++. ++++
T Consensus 236 ---~~----p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 236 ---FY----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp ---CC----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ---CC----CcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 01 111234678899999999999999997 6653
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-39 Score=359.99 Aligned_cols=253 Identities=21% Similarity=0.286 Sum_probs=206.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|... +|+.||+|++..........+.+|+.+++.++||||+++++++.++...++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467999999999999999999875 6889999999766555566788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC--CCcEEEccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE--EFEAKVADFGLARLISA 834 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~~~~ 834 (959)
+++|+|.+++.... ..+++.+++.++.|++.||+||| +.||+||||||+||+++. ++.+||+|||+++....
T Consensus 130 ~~gg~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 130 LSGGELFDRIAAED---YKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp CCCCBHHHHTTCTT---CCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred CCCCcHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 99999999997543 35889999999999999999999 889999999999999974 47899999999987653
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
.. ......||+.|+|||++.+..++.++||||+||++|||++|..||..... ... ...+...... ..+
T Consensus 204 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-------~~~-~~~i~~~~~~--~~~ 271 (387)
T 1kob_A 204 DE--IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-------LET-LQNVKRCDWE--FDE 271 (387)
T ss_dssp TS--CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHH-HHHHHHCCCC--CCS
T ss_pred Cc--ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-------HHH-HHHHHhCCCC--CCc
Confidence 22 22334789999999999999999999999999999999999999965321 111 1222221110 111
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ........+.+++.+||+.||++|||+.|++++
T Consensus 272 ~----~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 272 D----AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp S----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred c----ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1 111233467899999999999999999999874
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=364.03 Aligned_cols=263 Identities=29% Similarity=0.436 Sum_probs=209.5
Q ss_pred HHhcCCCCCCeeccCCCeEEEEEEc------CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecC
Q 002155 676 EATNNFCKTNIIGDGGFGTVYKAAL------PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFD 747 (959)
Q Consensus 676 ~~~~~f~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 747 (959)
...++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+++++++ +||||+++++++...
T Consensus 19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 98 (359)
T 3vhe_A 19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 98 (359)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC
Confidence 3567899999999999999999973 246789999997543 33456789999999999 789999999998775
Q ss_pred C-ceEEEEEeccCCCHHHHHhhhcCC------------------------------------------------------
Q 002155 748 E-EKLLVYEYMVNGSLDLWLRNRTGS------------------------------------------------------ 772 (959)
Q Consensus 748 ~-~~~lv~e~~~~g~L~~~l~~~~~~------------------------------------------------------ 772 (959)
+ ..++||||+++|+|.++++.....
T Consensus 99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
T 3vhe_A 99 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 178 (359)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence 5 489999999999999999875421
Q ss_pred --------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc-cccccc
Q 002155 773 --------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET-HVSTDI 843 (959)
Q Consensus 773 --------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~ 843 (959)
...+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++....... ......
T Consensus 179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 255 (359)
T 3vhe_A 179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255 (359)
T ss_dssp -----CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--C
T ss_pred cccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhcccc
Confidence 112889999999999999999999 88999999999999999999999999999986543222 223345
Q ss_pred cccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCH
Q 002155 844 AGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSK 922 (959)
Q Consensus 844 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (959)
.||+.|+|||++.+..++.++|||||||++|||++ |..||...... ..+...+........ +.
T Consensus 256 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-------~~~~~~~~~~~~~~~---------~~ 319 (359)
T 3vhe_A 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-------EEFCRRLKEGTRMRA---------PD 319 (359)
T ss_dssp EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-------HHHHHHHHHTCCCCC---------CT
T ss_pred CCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh-------HHHHHHHHcCCCCCC---------CC
Confidence 68899999999988899999999999999999998 99998653222 112222222211111 11
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 923 PMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 923 ~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.....+.+++.+||+.||++|||++|++++|+++.
T Consensus 320 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 320 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 12346788999999999999999999999999874
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=349.74 Aligned_cols=263 Identities=25% Similarity=0.323 Sum_probs=201.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
++|++.+.||+|+||+||+|++. +++.||||++.... ......+.+|+.++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57889999999999999999875 68999999986433 3334678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++ ++.+++.... ..+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||.++.....
T Consensus 82 ~~~~-~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9976 6666655433 35899999999999999999999 889999999999999999999999999999876432
Q ss_pred cccccccccccccccCCCcCCCCC-CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC-
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGR-STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD- 913 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 913 (959)
........||+.|+|||++.+.. ++.++||||+||++|||++|+.||...... ......+.+.........+..
T Consensus 155 -~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~ 230 (292)
T 3o0g_A 155 -VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV---DDQLKRIFRLLGTPTEEQWPSM 230 (292)
T ss_dssp -CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH---HHHHHHHHHHHCCCCTTTCTTG
T ss_pred -cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH---HHHHHHHHHHhCCCChhhhhhh
Confidence 22233457899999999887765 799999999999999999998886443221 111111222111111100000
Q ss_pred --------------ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 --------------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 --------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..............+.+++.+|++.||++|||++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp GGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000011112344567899999999999999999999874
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-40 Score=359.69 Aligned_cols=253 Identities=24% Similarity=0.328 Sum_probs=201.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch-hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 357899999999999999999876 789999999864332 233568899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++|+|.+++.... .+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 86 YCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp CCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred cCCCCcHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 999999999987543 5889999999999999999999 889999999999999999999999999999865432
Q ss_pred c-ccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 836 E-THVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 836 ~-~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
. ........||+.|+|||++.+..+ +.++||||+||++|||++|+.||....... .. .. ....... ...
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~----~~-~~~~~~~--~~~ 229 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QE----YS-DWKEKKT--YLN 229 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS--HH----HH-HHHTTCT--TST
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH--HH----HH-HHhcccc--cCC
Confidence 2 222335679999999999887775 778999999999999999999996532211 01 11 1111100 000
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........+.+++.+||+.||++|||++|++++
T Consensus 230 ------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 230 ------PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ------ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 112233467789999999999999999999864
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=371.18 Aligned_cols=261 Identities=22% Similarity=0.226 Sum_probs=206.3
Q ss_pred HHHHHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecC
Q 002155 672 VHILEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD 747 (959)
Q Consensus 672 ~~~~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 747 (959)
.+.....++|++.++||+|+||+||+|+.+ +|+.||||++.+.. ....+.+.+|..++..++||||+++++++.++
T Consensus 54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 133 (412)
T 2vd5_A 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE 133 (412)
T ss_dssp HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence 344445688999999999999999999975 68999999987532 22334578899999999999999999999999
Q ss_pred CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccc
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFG 827 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 827 (959)
+..|+||||+++|+|.+++.... ..+++..++.++.||+.||+||| +.||+||||||+|||++.++++||+|||
T Consensus 134 ~~~~lVmE~~~gg~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 134 NYLYLVMEYYVGGDLLTLLSKFG---ERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHS---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEcCCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeech
Confidence 99999999999999999998753 35889999999999999999999 8899999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcCC-------CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHH
Q 002155 828 LARLISACETHVSTDIAGTFGYIPPEYGQ-------SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (959)
+++.............+||+.|+|||++. ...++.++||||+||++|||++|+.||...... . ..
T Consensus 208 la~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-------~-~~ 279 (412)
T 2vd5_A 208 SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA-------E-TY 279 (412)
T ss_dssp TCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------H-HH
T ss_pred hheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH-------H-HH
Confidence 99876543333334568999999999876 457899999999999999999999999653211 1 11
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCC---CCHHHHHHH
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMR---PTMLHVLKF 952 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---ps~~ell~~ 952 (959)
..+..... ....|. ........+.+++.+||. +|++| |+++|++++
T Consensus 280 ~~i~~~~~-~~~~p~----~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 280 GKIVHYKE-HLSLPL----VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHHHTHHH-HCCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred HHHHhccc-CcCCCc----cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 11111000 000011 011233467889999999 99998 589998764
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=344.41 Aligned_cols=253 Identities=29% Similarity=0.497 Sum_probs=201.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhh-------HHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQG-------HREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
.++|++.+.||+|+||.||+|++. +++.||+|++....... .+.+.+|+.++++++||||+++++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 467888999999999999999874 78999999986432211 157889999999999999999999986544
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEECCCCc-----EE
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH--IIHRDIKASNILLNEEFE-----AK 822 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~-----~k 822 (959)
++||||+++|+|.+++.... ..+++..++.++.|++.|++||| +.| |+||||||+||+++.++. +|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred -eEEEEecCCCCHHHHHhccc---CCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEE
Confidence 79999999999999887644 36899999999999999999999 788 999999999999988776 99
Q ss_pred EcccccccccccccccccccccccccccCCCcC--CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHH
Q 002155 823 VADFGLARLISACETHVSTDIAGTFGYIPPEYG--QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 823 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (959)
|+|||+++.... ......||+.|+|||++ ....++.++||||+||++|||++|+.||...... ......
T Consensus 170 l~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~ 240 (287)
T 4f0f_A 170 VADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG-----KIKFIN 240 (287)
T ss_dssp ECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC-----HHHHHH
T ss_pred eCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc-----HHHHHH
Confidence 999999975432 23345789999999998 3455789999999999999999999999653221 111111
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
....... .+.. ...+...+.+++.+||+.||++|||++|+++.|+++
T Consensus 241 ~~~~~~~-----~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 241 MIREEGL-----RPTI----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHHSCC-----CCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHhccCC-----CCCC----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1111111 1111 122335688999999999999999999999999875
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-40 Score=349.74 Aligned_cols=250 Identities=31% Similarity=0.467 Sum_probs=193.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccch----hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKT----QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|++. ++.||||++..... ...+.+.+|+++++.++||||+++++++..++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57888999999999999999984 88999999865432 23467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC---eEeCCCCCCCEEECC--------CCcEEE
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH---IIHRDIKASNILLNE--------EFEAKV 823 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~---ivH~dlk~~Nill~~--------~~~~kl 823 (959)
||+++++|.+++... .+++..++.++.|++.|++||| +.| |+||||||+||+++. ++.+||
T Consensus 86 e~~~~~~L~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl 157 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK-----RIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKI 157 (271)
T ss_dssp ECCTTEEHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEE
T ss_pred EcCCCCCHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEE
Confidence 999999999998643 4889999999999999999999 667 999999999999986 678999
Q ss_pred cccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHh
Q 002155 824 ADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKM 903 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (959)
+|||.++...... .....||+.|+|||.+.+..++.++||||+|+++|||++|+.||...... . .....
T Consensus 158 ~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~-~~~~~ 226 (271)
T 3dtc_A 158 TDFGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL-------A-VAYGV 226 (271)
T ss_dssp CCCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH-------H-HHHHH
T ss_pred ccCCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------H-HHHhh
Confidence 9999997654322 22457899999999998888999999999999999999999998643211 1 11111
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
...... ... .......+.+++.+||+.||++|||++|++++|+++
T Consensus 227 ~~~~~~----~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 227 AMNKLA----LPI----PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HTSCCC----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred hcCCCC----CCC----CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 111111 111 112234688899999999999999999999999875
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=356.33 Aligned_cols=260 Identities=18% Similarity=0.213 Sum_probs=207.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|+. .+++.||||++..... .+.+.+|+++++.+ +||||+++++++..++..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 46788999999999999999986 4789999999865432 23578899999999 99999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc-----EEEccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE-----AKVADFGLAR 830 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfg~~~ 830 (959)
|+ +++|.+++.... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++. +||+|||+++
T Consensus 86 ~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 86 LL-GPSLEDLFDLCD---RTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp CC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred eC-CCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 99 999999998653 35899999999999999999999 889999999999999998887 9999999998
Q ss_pred cccccccc------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh
Q 002155 831 LISACETH------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904 (959)
Q Consensus 831 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (959)
........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....+ ...... ..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~----~~~~~~-~~i~ 233 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD----TLKERY-QKIG 233 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS----SHHHHH-HHHH
T ss_pred eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc----cHHHHH-HHHH
Confidence 76433221 123457999999999999999999999999999999999999999754221 121111 1111
Q ss_pred cCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..... ..+...... .. .+.+++.+||+.||.+||+++++.+.|+++.
T Consensus 234 ~~~~~--~~~~~~~~~---~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 234 DTKRA--TPIEVLCEN---FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp HHHHH--SCHHHHTTT---CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred hhhcc--CCHHHHhcc---Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 10000 000000011 12 7889999999999999999999999998774
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=357.77 Aligned_cols=260 Identities=25% Similarity=0.382 Sum_probs=194.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCC----CEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCce-
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDG----KTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK- 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~----~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~- 750 (959)
.++|++.+.||+|+||.||+|++... ..||||++... .....+.+.+|++++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 46799999999999999999987643 27999998754 344567789999999999999999999999776655
Q ss_pred -----EEEEEeccCCCHHHHHhhhcC--CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEE
Q 002155 751 -----LLVYEYMVNGSLDLWLRNRTG--SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 751 -----~lv~e~~~~g~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 823 (959)
++||||+++|+|.+++..... ....+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEEE
Confidence 999999999999999976542 2225889999999999999999999 889999999999999999999999
Q ss_pred ccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHH
Q 002155 824 ADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
+|||+++........ ......+++.|+|||.+.+..++.++||||+||++|||++ |..||...... .. ..
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~----~~ 250 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA----EI----YN 250 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GH----HH
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH----HH----HH
Confidence 999999866432221 1223356789999999988899999999999999999999 89998653221 11 12
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+...... . ........+.+++.+||+.||++|||+.++++.|+++.
T Consensus 251 ~~~~~~~~-----~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 251 YLIGGNRL-----K----QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp HHHTTCCC-----C----CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhcCCCC-----C----CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 22221110 0 11123346889999999999999999999999999874
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-39 Score=348.69 Aligned_cols=261 Identities=15% Similarity=0.174 Sum_probs=208.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++.... ..+.+.+|+..++.+ +|++++++++++..+...++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 45788999999999999999986 478999999886433 234577899999999 79999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc-----EEEccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE-----AKVADFGLAR 830 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfg~~~ 830 (959)
|+ +++|.+++.... ..+++.+++.++.|++.|++||| +.||+||||||+||+++.++. +||+|||.++
T Consensus 87 ~~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 87 LL-GPSLEDLLDLCG---RKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp CC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred ec-CCCHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 99 999999998654 35899999999999999999999 899999999999999987766 9999999998
Q ss_pred cccccccc------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh
Q 002155 831 LISACETH------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904 (959)
Q Consensus 831 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (959)
........ ......||+.|+|||++.+..++.++||||+|+++|||++|+.||........ ......+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~ 238 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-KQKYERIGEKKQ 238 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH-HHHHHHHHHHHH
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc-HHHHHHHHhhcc
Confidence 76543221 22345799999999999999999999999999999999999999975322211 111111111111
Q ss_pred cCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..... .. ...+...+.+++.+||+.||++||+++++++.|+++.
T Consensus 239 ~~~~~-----~~----~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~ 282 (298)
T 1csn_A 239 STPLR-----EL----CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 282 (298)
T ss_dssp HSCHH-----HH----TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred CccHH-----HH----HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence 11100 00 0122346889999999999999999999999999874
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-39 Score=351.69 Aligned_cols=266 Identities=26% Similarity=0.368 Sum_probs=190.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467999999999999999999875 68999999986543 2334678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcC--CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 756 YMVNGSLDLWLRNRTG--SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|++ |+|.+++..... ....+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 599999876532 2235889999999999999999999 8899999999999999999999999999998764
Q ss_pred cccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc--
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD-- 910 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 910 (959)
... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+...........
T Consensus 160 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~ 234 (317)
T 2pmi_A 160 IPV-NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE----EQLKLIFDIMGTPNESLWP 234 (317)
T ss_dssp SCC-CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCSCCTTTCG
T ss_pred CCc-ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHHhCCCChhHhh
Confidence 322 22234578999999998876 46899999999999999999999999653221 11111211111100000
Q ss_pred ------ccCcccc---CC---------CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 ------VLDPTVL---TA---------DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 ------~~~~~~~---~~---------~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...+... .. ........+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0000000 00 011233468899999999999999999999864
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-40 Score=359.32 Aligned_cols=256 Identities=25% Similarity=0.426 Sum_probs=200.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCC----EEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGK----TVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
.++|++.++||+|+||.||+|++. +++ +||+|.+.... ....+.+.+|+.++++++||||+++++++..+ ..+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeE
Confidence 357888999999999999999864 344 46888875432 34456789999999999999999999999865 478
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||+.+|+|.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEECCTTCBHHHHHHHST---TSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 9999999999999998754 35889999999999999999999 78999999999999999999999999999987
Q ss_pred cccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 832 ISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 832 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
........ .....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... . +...+......
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~----~~~~~~~~~~~ 238 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----E----ISSILEKGERL 238 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----G----HHHHHHTTCCC
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH----H----HHHHHHcCCCC
Confidence 65332222 223456889999999999999999999999999999999 99998653221 1 12222222111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.....+...+.+++.+||+.||++||+++|++++|+++.
T Consensus 239 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 239 ---------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp ---------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred ---------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 011123346888999999999999999999999998874
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-40 Score=376.17 Aligned_cols=256 Identities=30% Similarity=0.466 Sum_probs=203.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.+.||+|+||.||+|++.++..||||+++... ...+++.+|++++++++||||+++++++.. +..++||||+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 45688899999999999999999888889999997543 235678999999999999999999999876 6789999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++|+|.++++...+ ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.......
T Consensus 261 ~~gsL~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 335 (452)
T 1fmk_A 261 SKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335 (452)
T ss_dssp TTCBHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred cCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence 99999999975431 24788999999999999999999 88999999999999999999999999999987653322
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......++..|+|||.+.+..++.++|||||||++|||++ |+.||..... ..+...+..+... .
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--------~~~~~~i~~~~~~-----~- 401 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQVERGYRM-----P- 401 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHHTTCCC-----C-
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCC-----C-
Confidence 22233456789999999988899999999999999999999 8999864321 1122333322111 1
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+..+...+.+++.+||+.||++|||++++++.|+++.
T Consensus 402 ---~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 402 ---CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred ---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 11223456888999999999999999999999999874
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=348.99 Aligned_cols=250 Identities=26% Similarity=0.350 Sum_probs=195.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--------------------------hhHHHHHHHHHHHh
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--------------------------QGHREFTAEMETLG 730 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~ 730 (959)
.++|++.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 357888999999999999999865 688999999864321 11345789999999
Q ss_pred cCCCCceeccccceec--CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCC
Q 002155 731 KVKHQNLVPLLGYCSF--DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDI 808 (959)
Q Consensus 731 ~l~h~niv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl 808 (959)
+++||||+++++++.. ++..++||||+++++|.++... ..+++.+++.++.|++.||+||| +.||+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-----KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCC
Confidence 9999999999999876 5678999999999999876543 35899999999999999999999 889999999
Q ss_pred CCCCEEECCCCcEEEcccccccccccccccccccccccccccCCCcCCCCC---CCCcCcchhHHHHHHHHHhCCCCCCC
Q 002155 809 KASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGR---STTRGDVYSFGVILLELVTGKEPTGP 885 (959)
Q Consensus 809 k~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~elltg~~p~~~ 885 (959)
||+||+++.++.+||+|||+++...... .......||+.|+|||.+.+.. ++.++||||+||++|||++|+.||..
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSD-ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSS-CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CHHHEEECCCCCEEEecCCCcccccccc-ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 9999999999999999999998765322 2233457999999999987665 37789999999999999999999864
Q ss_pred CCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 886 EFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ... ....+....... + . .......+.+++.+||+.||++||+++|++++
T Consensus 243 ~~-------~~~-~~~~~~~~~~~~---~-~----~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 243 ER-------IMC-LHSKIKSQALEF---P-D----QPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp SS-------HHH-HHHHHHHCCCCC---C-S----SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred cc-------HHH-HHHHHhcccCCC---C-C----ccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 21 111 122222211110 0 0 11123467889999999999999999999764
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=356.05 Aligned_cols=250 Identities=26% Similarity=0.313 Sum_probs=203.9
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 751 (959)
..++|++.++||+|+||.||+|+.+ +++.||+|++.... ....+.+..|..+++.+ +||+|+++++++...+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3468999999999999999999976 47899999987542 23456678899999988 7999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||++||+|.+++.... .+++..++.++.||+.||+||| +.||+||||||+||+++.++++||+|||+++.
T Consensus 98 lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 9999999999999998754 5889999999999999999999 88999999999999999999999999999975
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.... .......+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .+.+.+......
T Consensus 171 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~~~~-- 239 (353)
T 2i0e_A 171 NIWD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIMEHNVA-- 239 (353)
T ss_dssp CCCT-TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCC--
T ss_pred cccC-CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH--------HHHHHHHhCCCC--
Confidence 4321 22234567999999999999999999999999999999999999999653211 122222222111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT-----MLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~ell~~ 952 (959)
.| ......+.+++.+||+.||++||+ +++++++
T Consensus 240 -~p-------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 240 -YP-------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp -CC-------TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred -CC-------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 01 123346788999999999999995 5777654
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-39 Score=355.06 Aligned_cols=251 Identities=23% Similarity=0.310 Sum_probs=181.6
Q ss_pred CCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CCceeccccceecCCceEEEEEeccCCC
Q 002155 684 TNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKLLVYEYMVNGS 761 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g~ 761 (959)
.+.||+|+||.||+|+++ +++.||||++... ....+.+|+.+++.+. ||||+++++++.++...++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999875 6899999998643 3356778999999997 9999999999999999999999999999
Q ss_pred HHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC---cEEEccccccccccccccc
Q 002155 762 LDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF---EAKVADFGLARLISACETH 838 (959)
Q Consensus 762 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~~~~~~~~~~~ 838 (959)
|.+++.... .+++.++..++.|++.|++||| +.||+||||||+||+++.++ .+||+|||+++...... .
T Consensus 93 L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~ 164 (325)
T 3kn6_A 93 LFERIKKKK----HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-Q 164 (325)
T ss_dssp HHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred HHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-C
Confidence 999998753 5899999999999999999999 88999999999999997765 89999999998654322 2
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccC
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (959)
......||+.|+|||++.+..++.++||||+||++|||++|..||............. .+...+..+.... . .
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~-~~~~~i~~~~~~~--~----~ 237 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAV-EIMKKIKKGDFSF--E----G 237 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHH-HHHHHHTTTCCCC--C----S
T ss_pred cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHH-HHHHHHHcCCCCC--C----c
Confidence 2234568999999999999999999999999999999999999997644332222222 2233333221110 0 0
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 919 ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.........+.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 238 EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred ccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 0012234568899999999999999999998754
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-39 Score=354.58 Aligned_cols=245 Identities=22% Similarity=0.282 Sum_probs=204.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|+.+ +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++.+++..|+||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57889999999999999999875 68999999986532 234567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... .+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp ECCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccC
Confidence 9999999999998754 4889999999999999999999 89999999999999999999999999999986543
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. .....||+.|+|||++.+..++.++||||+||++|||++|..||..... ..+...+..+... .|
T Consensus 194 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~---~p 258 (350)
T 1rdq_E 194 R----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--------IQIYEKIVSGKVR---FP 258 (350)
T ss_dssp C----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCC---CC
T ss_pred C----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--------HHHHHHHHcCCCC---CC
Confidence 2 2345799999999999999999999999999999999999999964321 1122222222110 01
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPT-----MLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~ell~~ 952 (959)
......+.+++.+||+.||++||+ ++|++++
T Consensus 259 -------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 259 -------SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp -------TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred -------CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 122346788999999999999998 8888764
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=358.60 Aligned_cols=253 Identities=21% Similarity=0.269 Sum_probs=193.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 467999999999999999999976 789999999875432 235678999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc--EEEccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE--AKVADFGLARLISA 834 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~~~~~~~ 834 (959)
+++|+|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++. +||+|||+++....
T Consensus 98 ~~~~~L~~~l~~~~----~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 98 ASGGELYERICNAG----RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp CCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred CCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 99999999997654 5889999999999999999999 899999999999999987765 99999999974332
Q ss_pred ccccccccccccccccCCCcCCCCCCCCc-CcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTR-GDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
........||+.|+|||++.+..++.+ +||||+||++|||++|+.||...... ......+ ..+.......
T Consensus 171 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~~~-~~~~~~~~~~--- 241 (361)
T 3uc3_A 171 --HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP---RDYRKTI-QRILSVKYSI--- 241 (361)
T ss_dssp ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C---CCHHHHH-HHHHTTCCCC---
T ss_pred --cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH---HHHHHHH-HHHhcCCCCC---
Confidence 122234579999999999888777655 89999999999999999999653222 1122222 2221111100
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+ ........+.+++.+||+.||++|||++|++++
T Consensus 242 ~-----~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 242 P-----DDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp C-----TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred C-----CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0 011123467889999999999999999999875
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=349.28 Aligned_cols=263 Identities=27% Similarity=0.380 Sum_probs=201.3
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcC--CCCceeccccceecC----Cce
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKV--KHQNLVPLLGYCSFD----EEK 750 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~----~~~ 750 (959)
..++|++.+.||+|+||.||+|++. ++.||||++..... ..+..|.+++... +||||+++++++... ...
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 110 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL 110 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence 4578999999999999999999985 89999999864322 3344555555554 899999999998776 678
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCC--------CeEeCCCCCCCEEECCCCcEE
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP--------HIIHRDIKASNILLNEEFEAK 822 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~--------~ivH~dlk~~Nill~~~~~~k 822 (959)
++||||+++|+|.++++.. .+++..++.++.|++.||+||| +. ||+||||||+||+++.++.+|
T Consensus 111 ~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 111 YLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp EEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred EEEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 9999999999999999764 3889999999999999999999 67 999999999999999999999
Q ss_pred Ecccccccccccccccc---cccccccccccCCCcCCCCCCCCc------CcchhHHHHHHHHHhC----------CCCC
Q 002155 823 VADFGLARLISACETHV---STDIAGTFGYIPPEYGQSGRSTTR------GDVYSFGVILLELVTG----------KEPT 883 (959)
Q Consensus 823 l~Dfg~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~DvwslG~il~elltg----------~~p~ 883 (959)
|+|||+++......... .....||+.|+|||++.+..++.+ +|||||||++|||++| ..||
T Consensus 183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~ 262 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262 (337)
T ss_dssp ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence 99999997664322221 124578999999999887776665 9999999999999999 5555
Q ss_pred CCCCccccCCchHHHHHHHhhcCccccccCccccC-CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 884 GPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT-ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
....... ............... .+.... .....+...+.+++.+||+.||++|||+.|++++|+++..
T Consensus 263 ~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 263 HDLVPSD---PSYEDMREIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp TTTSCSS---CCHHHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhcCCC---CchhhhHHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 4322221 111112222221111 111111 1123677789999999999999999999999999999854
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=349.15 Aligned_cols=261 Identities=30% Similarity=0.478 Sum_probs=197.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.++||+|+||.||+|++. ..||||++... .....+.+.+|+.++++++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 467888999999999999999874 36999998643 334456788999999999999999999965 4567899999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++.... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 100 WCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp CCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred ecCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccccc
Confidence 999999999997543 35889999999999999999999 889999999999999999999999999999765431
Q ss_pred -cccccccccccccccCCCcCC---CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 836 -ETHVSTDIAGTFGYIPPEYGQ---SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 836 -~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.........||+.|+|||.+. +..++.++||||+|+++|||++|+.||...... ..+...+........
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~ 246 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-------DQIIEMVGRGSLSPD 246 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH-------HHHHHHHHHTSCCCC
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH-------HHHHHHhcccccCcc
Confidence 122223456899999999876 567888999999999999999999998653221 122222322221111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcC
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 959 (959)
. ......+...+.+++.+||+.||++|||++++++.|+++..|
T Consensus 247 ~-----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~e 289 (289)
T 3og7_A 247 L-----SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289 (289)
T ss_dssp T-----TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTCC
T ss_pred h-----hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhhC
Confidence 1 111222345788999999999999999999999999998764
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-39 Score=348.38 Aligned_cols=251 Identities=23% Similarity=0.395 Sum_probs=203.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC-C-------CEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD-G-------KTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
.++|++.+.||+|+||.||+|++.. + ..||+|++........+.+.+|+.++++++||||+++++++..++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3578889999999999999998653 3 4799999987666677889999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc--------E
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE--------A 821 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--------~ 821 (959)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++. +
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNK---NCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred CEEEEECCCCCCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCccccccccee
Confidence 999999999999999998754 34889999999999999999999 889999999999999988877 9
Q ss_pred EEcccccccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHH
Q 002155 822 KVADFGLARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 822 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (959)
||+|||.+...... ....+++.|+|||.+.+ ..++.++||||+|+++|||++|..|+...... .. ..
T Consensus 161 kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~------~~-~~ 228 (289)
T 4fvq_A 161 KLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS------QR-KL 228 (289)
T ss_dssp EECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HH-HH
T ss_pred eeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch------HH-HH
Confidence 99999999654321 22457889999998877 67899999999999999999966554332211 11 11
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
....... . .+... ...+.+++.+||+.||++|||++|++++|+++.
T Consensus 229 ~~~~~~~---~-~~~~~-------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~ 274 (289)
T 4fvq_A 229 QFYEDRH---Q-LPAPK-------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274 (289)
T ss_dssp HHHHTTC---C-CCCCS-------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred HHhhccC---C-CCCCC-------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 1111110 0 01111 124778999999999999999999999999873
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=352.81 Aligned_cols=259 Identities=26% Similarity=0.405 Sum_probs=213.0
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
..++|++.+.||+|+||.||+|.+. ++..||+|++.... ...+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 3567888999999999999999976 48889999987543 345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++.... ...+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 90 ~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 90 FMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp CCTTEEHHHHHHHCC--TTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred cCCCCcHHHHHHhcc--cCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 999999999998643 245889999999999999999999 789999999999999999999999999999876544
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
.........+++.|+|||.+.+..++.++||||+|+++|+|++ |..||...... . +...+..... +
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~----~----~~~~~~~~~~-----~ 231 (288)
T 3kfa_A 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----Q----VYELLEKDYR-----M 231 (288)
T ss_dssp SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----G----HHHHHHTTCC-----C
T ss_pred ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----H----HHHHHhccCC-----C
Confidence 4333444567889999999988899999999999999999999 88998653221 1 1222222111 1
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
. ........+.+++.+||+.||++|||++++++.|+++..
T Consensus 232 ~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 232 E----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C----CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 1 111223468899999999999999999999999998753
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-39 Score=352.59 Aligned_cols=262 Identities=23% Similarity=0.331 Sum_probs=206.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceecccccee----cCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS----FDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----~~~~~~l 752 (959)
.++|++.+.||+|+||.||+|+. .+++.||||++........+.+.+|+.+++.++||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 46799999999999999999987 478999999987666666778899999999999999999999986 3347799
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.........+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 99999999999999875444457899999999999999999999 789999999999999999999999999998764
Q ss_pred cccccc--------ccccccccccccCCCcCCCCC---CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHH
Q 002155 833 SACETH--------VSTDIAGTFGYIPPEYGQSGR---STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 833 ~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
...... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||...... ..... .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~----~ 258 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK--GDSVA----L 258 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT--TSCHH----H
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc--cchhh----H
Confidence 321110 011235799999999987654 688999999999999999999998532111 01111 1
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
...... .. +........+.+++.+||+.||++||++++++++|+++.
T Consensus 259 ~~~~~~-----~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 259 AVQNQL-----SI----PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp HHHCC-------C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred HhhccC-----CC----CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 111110 00 011122346889999999999999999999999999875
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=348.79 Aligned_cols=256 Identities=23% Similarity=0.359 Sum_probs=203.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC----CCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD----GKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.+.||+|+||.||+|++.+ +..||+|.+... .....+.+.+|+.+++.++||||+++++++.. +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4678889999999999999998542 346999998764 33445678899999999999999999998864 56799
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++++|.+++.... ..+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+...
T Consensus 90 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNK---NSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp EEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred EEecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 999999999999998754 34788999999999999999999 889999999999999999999999999999876
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
............+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...... ... ..+.......
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~----~~~----~~~~~~~~~~- 234 (281)
T 3cc6_A 164 EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK----DVI----GVLEKGDRLP- 234 (281)
T ss_dssp ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG----GHH----HHHHHTCCCC-
T ss_pred ccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH----HHH----HHHhcCCCCC-
Confidence 5433333334467889999999988889999999999999999998 99998643221 121 2222211100
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. .......+.+++.+||+.||++||++.|++++|+++.
T Consensus 235 -~-------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 235 -K-------PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp -C-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -C-------CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 0 1112346788999999999999999999999999874
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-39 Score=356.69 Aligned_cols=252 Identities=23% Similarity=0.326 Sum_probs=190.8
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
..++|++.+.||+|+||.||+|++. +++.||||++.... ..+.+.+|++++++++||||+++++++..++..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 4567999999999999999999976 57899999987543 34567889999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---CCcEEEccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE---EFEAKVADFGLARLI 832 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~~~~~ 832 (959)
|+++|+|.+++.... .+++.+++.++.|++.||+||| +.||+||||||+||+++. ++.+||+|||+++..
T Consensus 129 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG----YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp CCCSCBHHHHHTTCS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred eCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 999999999997643 5889999999999999999999 789999999999999975 889999999999865
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
... .......||+.|+|||++.+..++.++|||||||++|||++|..||...... ......+...... .
T Consensus 202 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~i~~~~~~-~- 270 (349)
T 2w4o_A 202 EHQ--VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-------QFMFRRILNCEYY-F- 270 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-------HHHHHHHHTTCCC-C-
T ss_pred Ccc--cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-------HHHHHHHHhCCCc-c-
Confidence 432 2223457899999999999989999999999999999999999998643221 1122222222111 0
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...........+.+++.+||+.||++|||+.|++++
T Consensus 271 ----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 271 ----ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp ----CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111112234567899999999999999999999874
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-39 Score=350.92 Aligned_cols=264 Identities=24% Similarity=0.403 Sum_probs=206.8
Q ss_pred cCCCCCCeeccCCCeEEEEEEc-----CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecC--Cce
Q 002155 679 NNFCKTNIIGDGGFGTVYKAAL-----PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD--EEK 750 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 750 (959)
++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+++++.++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4578889999999999999983 368899999987543 33456788999999999999999999999776 668
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++|+|.+++.... ..+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNK---NKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECcccccc
Confidence 99999999999999997654 35889999999999999999999 8899999999999999999999999999998
Q ss_pred ccccccc--cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCcc-------ccCCchHHHHHH
Q 002155 831 LISACET--HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKD-------IEGGNLVGWVFQ 901 (959)
Q Consensus 831 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~-------~~~~~~~~~~~~ 901 (959)
....... .......+|..|+|||.+.+..++.++||||+|+++|||++|..|+...... .........+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 7654322 2223456788999999998888999999999999999999999986432110 001111111222
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+...... ..+......+.+++.+||+.||++|||++++++.|+++.
T Consensus 255 ~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 255 TLKEGKRL---------PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHTTCCC---------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhccCCC---------CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 22221111 111223456889999999999999999999999999874
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=347.57 Aligned_cols=263 Identities=24% Similarity=0.386 Sum_probs=201.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.+.||+|+||.||+|+.. +|+.||||++... .......+.+|+.++++++||||+++++++..++..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 457999999999999999999864 7899999998642 234456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.........+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 9999999999999764433456899999999999999999999 8899999999999999999999999999997654
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ... ....+.....
T Consensus 188 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~-~~~~~~~~~~----- 255 (310)
T 2wqm_A 188 SKT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-----LYS-LCKKIEQCDY----- 255 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC-----HHH-HHHHHHTTCS-----
T ss_pred CCC-ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh-----HHH-HHHHhhcccC-----
Confidence 322 2223456899999999999889999999999999999999999998643211 111 1222222111
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
+... .......+.+++.+||+.||++|||++++++.|++++.
T Consensus 256 ~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 256 PPLP---SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp CCCC---TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCc---ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 1111 11233467889999999999999999999999999864
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=343.79 Aligned_cols=258 Identities=21% Similarity=0.304 Sum_probs=199.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch---hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT---QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.+.||+|+||.||+|++. +++.||+|++..... ...+.+.+|+.++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 478999999999999999999975 688999999875432 2346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.... .+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 113 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG----PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 99999999999998754 5889999999999999999999 8899999999999999999999999999997765
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
...........|++.|+|||.+.+..++.++||||+|+++|||++|+.||..... ..+...+..... .
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~----~ 253 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL--------SVMGAHINQAIP----R 253 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH--------HHHHHHHHSCCC----C
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH--------HHHHHHhccCCC----C
Confidence 4333333445789999999999999999999999999999999999999865321 112222222111 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhhh
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-TMLHVLKFLKEIK 957 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~ell~~L~~l~ 957 (959)
+... .......+.+++.+||+.||++|| +++++++.|++..
T Consensus 254 ~~~~---~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l 295 (309)
T 2h34_A 254 PSTV---RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL 295 (309)
T ss_dssp GGGT---STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred cccc---CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence 1111 112233677899999999999999 9999999998764
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=358.27 Aligned_cols=360 Identities=27% Similarity=0.363 Sum_probs=247.9
Q ss_pred CCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCC
Q 002155 28 NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIE 107 (959)
Q Consensus 28 ~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~ 107 (959)
++..+.++. ..+++++.|+++++.+. .+|. +..+++|++|+|++|.+++. |. +..+++|++|++++|++++..+
T Consensus 34 ~~~~~~i~~--~~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~ 107 (466)
T 1o6v_A 34 TNVTDTVSQ--TDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP 107 (466)
T ss_dssp SSTTSEECH--HHHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG
T ss_pred cccccccCh--hHhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh
Confidence 344444442 35678889999999887 5664 88899999999999999854 44 8889999999999999887655
Q ss_pred cccccCCCCceeeecccccccccCcccCCC-cccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcC
Q 002155 108 GVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAA 186 (959)
Q Consensus 108 ~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 186 (959)
|.++++|++|++++|.+.+..+ +..+ +|++|++++|++.+. + .+..+++|++|++. |.+.+.. .+.++++
T Consensus 108 --~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~ 178 (466)
T 1o6v_A 108 --LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTT 178 (466)
T ss_dssp --GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTT
T ss_pred --hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCC
Confidence 8888888888888888775443 3333 466666666666542 1 35555555555554 2232111 2555555
Q ss_pred CceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEccc
Q 002155 187 LERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSH 266 (959)
Q Consensus 187 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 266 (959)
|++|++++|.+++. ..+..+++|++|++++|.+++..| ++.+++|++|++++|++++. +.+..+++|+.|++++
T Consensus 179 L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~ 252 (466)
T 1o6v_A 179 LERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLAN 252 (466)
T ss_dssp CCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCS
T ss_pred CCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCC
Confidence 55555555555532 234555555555555555553333 44455555555555555432 2344455555555555
Q ss_pred ccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEE
Q 002155 267 NNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTL 346 (959)
Q Consensus 267 N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 346 (959)
| .+.+..+ +..+++|+.|++++|.+++..+ +..+++|++|
T Consensus 253 n------------------------------------~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 292 (466)
T 1o6v_A 253 N------------------------------------QISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNL 292 (466)
T ss_dssp S------------------------------------CCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEE
T ss_pred C------------------------------------ccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeE
Confidence 5 4443333 6677778888888888876544 7888889999
Q ss_pred EccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCcccc
Q 002155 347 DLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELD 426 (959)
Q Consensus 347 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 426 (959)
++++|++++..+ +..+++|+.|++++|++++..| +..+++|++|++++|++++. ..+.++++|++|++++|+++
T Consensus 293 ~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~ 366 (466)
T 1o6v_A 293 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQIS 366 (466)
T ss_dssp ECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCC
T ss_pred EcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccC
Confidence 999998886544 7788899999999999887655 77889999999999999865 57888999999999999998
Q ss_pred CCCchhhhcccccceEeeccccccCCcccc
Q 002155 427 GQLPSSLSNILNLVGLYLQHNKLSGPVDEL 456 (959)
Q Consensus 427 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 456 (959)
+..| +..+++|+.|++++|+++++|...
T Consensus 367 ~~~~--~~~l~~L~~L~l~~n~~~~~p~~~ 394 (466)
T 1o6v_A 367 DLTP--LANLTRITQLGLNDQAWTNAPVNY 394 (466)
T ss_dssp BCGG--GTTCTTCCEEECCCEEEECCCBCC
T ss_pred ccch--hhcCCCCCEEeccCCcccCCchhh
Confidence 7665 888999999999999999876554
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-39 Score=345.26 Aligned_cols=253 Identities=25% Similarity=0.380 Sum_probs=204.5
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecC--CceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD--EEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|++. ++.||||++.... ....+.+.+|+.++++++||||+++++++... +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 57888999999999999999985 8899999987542 34456789999999999999999999999876 7789999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH--IIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||+++|+|.+++.... ...+++.+++.++.|++.|++||| +.+ ++||||||+||+++.++.++++|||++...
T Consensus 89 e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp ECCTTCBHHHHHHSCS--SCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred cccCCCcHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 9999999999998643 235899999999999999999999 788 999999999999999999999999887543
Q ss_pred ccccccccccccccccccCCCcCCCCCCCC---cCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTT---RGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
. .....||+.|+|||.+.+..++. ++||||+|+++|||++|+.||..... ............
T Consensus 164 ~------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~~-- 228 (271)
T 3kmu_A 164 Q------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN-------MEIGMKVALEGL-- 228 (271)
T ss_dssp S------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH-------HHHHHHHHHSCC--
T ss_pred c------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh-------HHHHHHHHhcCC--
Confidence 2 12346899999999988765554 79999999999999999999864321 111112221111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcC
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 959 (959)
.+.. +......+.+++.+||+.||++|||++|+++.|++++.+
T Consensus 229 ---~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~~ 271 (271)
T 3kmu_A 229 ---RPTI----PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQDK 271 (271)
T ss_dssp ---CCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC-
T ss_pred ---CCCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 1111 112334688899999999999999999999999998653
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=359.74 Aligned_cols=262 Identities=27% Similarity=0.429 Sum_probs=208.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc------CCCCEEEEEEcccc-chhhHHHHHHHHHHHhcC-CCCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL------PDGKTVAVKKLSQA-KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 749 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++... .....+.+.+|+.+++++ +||||+++++++..++.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 46889999999999999999985 24568999998754 233456788999999999 89999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCC-------------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCC
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGS-------------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKA 810 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~-------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 810 (959)
.++||||+++|+|.+++...... ...+++..++.++.|++.||+||| +.||+||||||
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp 200 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAA 200 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCh
Confidence 99999999999999999875421 134789999999999999999999 88999999999
Q ss_pred CCEEECCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCc
Q 002155 811 SNILLNEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFK 888 (959)
Q Consensus 811 ~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~ 888 (959)
+||+++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|||+| |..||.....
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 280 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence 9999999999999999999866433222 2233457889999999888889999999999999999998 9999865422
Q ss_pred cccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 889 DIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
. ..+...+..... +.. +......+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 281 ~-------~~~~~~~~~~~~-----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 281 D-------ANFYKLIQNGFK-----MDQ----PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp S-------HHHHHHHHTTCC-----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred H-------HHHHHHHhcCCC-----CCC----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 1 112222222211 111 11223468889999999999999999999999998743
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=356.63 Aligned_cols=247 Identities=23% Similarity=0.280 Sum_probs=197.1
Q ss_pred CCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCH
Q 002155 684 TNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
.++||+|+||.||+|+.. +|+.||+|++........+.+.+|++++++++||||+++++++..++..++||||+++++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 568999999999999864 6899999999876656667899999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE--CCCCcEEEccccccccccccccccc
Q 002155 763 DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL--NEEFEAKVADFGLARLISACETHVS 840 (959)
Q Consensus 763 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill--~~~~~~kl~Dfg~~~~~~~~~~~~~ 840 (959)
.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||++ +.++.+||+|||+++...... ..
T Consensus 174 ~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~~ 245 (373)
T 2x4f_A 174 FDRIIDES---YNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KL 245 (373)
T ss_dssp HHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--BC
T ss_pred HHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--cc
Confidence 99987643 35889999999999999999999 8899999999999999 667899999999998765322 22
Q ss_pred ccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCC
Q 002155 841 TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTAD 920 (959)
Q Consensus 841 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (959)
....||+.|+|||++.+..++.++|||||||++|||++|..||...... ............ ..+..
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-------~~~~~i~~~~~~---~~~~~---- 311 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-------ETLNNILACRWD---LEDEE---- 311 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHHTCCC---SCSGG----
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhccCC---CChhh----
Confidence 3446999999999999888999999999999999999999999653211 111222211110 00111
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 921 SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.......+.+++.+||+.||++||+++|++++
T Consensus 312 ~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 312 FQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11223467889999999999999999999873
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=355.86 Aligned_cols=266 Identities=24% Similarity=0.353 Sum_probs=211.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-----CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceecccccee--cCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-----PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS--FDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~ 750 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. .....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 35788899999999999999983 368899999998776666778999999999999999999999886 45568
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++++|.+++.... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+.
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred EEEEeecCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccce
Confidence 99999999999999998754 35899999999999999999999 8899999999999999999999999999998
Q ss_pred cccccccc--ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc-------cCCchHHHHHH
Q 002155 831 LISACETH--VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI-------EGGNLVGWVFQ 901 (959)
Q Consensus 831 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~-------~~~~~~~~~~~ 901 (959)
........ ......+|+.|+|||.+.+..++.++||||+|+++|||++|+.||....... ........+..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (327)
T 3lxl_A 176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLE 255 (327)
T ss_dssp ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHH
T ss_pred ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHH
Confidence 76432221 2233467888999999988889999999999999999999999985432110 01111112222
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.+..... ......+...+.+++.+||+.||++|||++|++++|+++..
T Consensus 256 ~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 256 LLEEGQR---------LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp HHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred HhhcccC---------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 2222211 11122334568899999999999999999999999998753
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-38 Score=359.34 Aligned_cols=235 Identities=20% Similarity=0.206 Sum_probs=173.3
Q ss_pred CccccCccchhhhhhcCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCC
Q 002155 12 PEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSES 91 (959)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~ 91 (959)
++.+..-.............+.-+..++++++|++|+|++|++.+ +| .++.+++|++|+|++|++++ +| ++.+++
T Consensus 12 ~~~~pd~~l~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~ 86 (457)
T 3bz5_A 12 NDWFPDDNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTN 86 (457)
T ss_dssp HHHCSSHHHHHHHHHHTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTT
T ss_pred ccccCcHHHHHHHHHhcCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCC
Confidence 344444444455555666677777889999999999999999985 56 69999999999999999995 44 889999
Q ss_pred CcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCC-cccEEeccCCccccccCcccccccceeEEEccc
Q 002155 92 LEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAAN 170 (959)
Q Consensus 92 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~ 170 (959)
|++|++++|++++. + |+++++|++|++++|.+.+. | +..+ +|++|++++|++++. .+..+++|++|++++
T Consensus 87 L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~ 157 (457)
T 3bz5_A 87 LTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHL 157 (457)
T ss_dssp CSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTT
T ss_pred CCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCC
Confidence 99999999999975 2 88999999999999988763 3 3443 588888888888764 266677777777777
Q ss_pred cccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCc
Q 002155 171 NLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIP 250 (959)
Q Consensus 171 n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 250 (959)
|...+.+ .++.+++|++|++++|++++ +| +..+++|+.|++++|.+++. .++.+++|++|++++|+++++ |
T Consensus 158 n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p 228 (457)
T 3bz5_A 158 NKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D 228 (457)
T ss_dssp CSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C
T ss_pred CCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C
Confidence 7443343 46667777777777777774 33 66777777777777777654 266677777777777777763 3
Q ss_pred hhhhcccCCCeeEcccccCCC
Q 002155 251 EKIADLAQLQCLVLSHNNLSG 271 (959)
Q Consensus 251 ~~~~~l~~L~~L~Ls~N~l~~ 271 (959)
+..+++|+.|++++|++++
T Consensus 229 --~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 229 --VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp --CTTCTTCSEEECCSSCCSC
T ss_pred --ccccCCCCEEEeeCCcCCC
Confidence 6666777777777776653
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=356.50 Aligned_cols=252 Identities=23% Similarity=0.346 Sum_probs=199.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCC-------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE------- 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------- 748 (959)
.++|++.+.||+|+||.||+|+++ +|+.||||++.... ....+.+.+|+.++++++||||++++++|.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457889999999999999999976 78999999986433 334567899999999999999999999885443
Q ss_pred --------------------------------------------------ceEEEEEeccCCCHHHHHhhhcCCccccCH
Q 002155 749 --------------------------------------------------EKLLVYEYMVNGSLDLWLRNRTGSLEVLGW 778 (959)
Q Consensus 749 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~ 778 (959)
..++||||+++|+|.+++..... .....+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchhh
Confidence 27999999999999999987542 344677
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc-----------cccccccccc
Q 002155 779 DKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET-----------HVSTDIAGTF 847 (959)
Q Consensus 779 ~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~-----------~~~~~~~gt~ 847 (959)
..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++....... .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 789999999999999999 88999999999999999999999999999987654321 1223456999
Q ss_pred cccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHH
Q 002155 848 GYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLK 927 (959)
Q Consensus 848 ~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (959)
.|+|||.+.+..++.++||||+||++|||++|..|+.. ............ .+.........
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----------~~~~~~~~~~~~---------~~~~~~~~~~~ 301 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----------RVRIITDVRNLK---------FPLLFTQKYPQ 301 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----------HHHHHHHHHTTC---------CCHHHHHHCHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----------HHHHHHHhhccC---------CCcccccCChh
Confidence 99999999999999999999999999999998776421 001111111111 01112234456
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 928 MLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 928 l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+.+++.+||+.||++|||++|++++
T Consensus 302 ~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 302 EHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHccCCCCcCCCHHHHhhc
Confidence 7889999999999999999999874
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-39 Score=362.68 Aligned_cols=271 Identities=21% Similarity=0.276 Sum_probs=212.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCC--ceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE--EKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv 753 (959)
.++|++.++||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 357889999999999999999976 58999999987543 334566789999999999999999999987655 67999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE----CCCCcEEEcccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL----NEEFEAKVADFGLA 829 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfg~~ 829 (959)
|||+++|+|.+++...... ..+++..++.++.|++.||+||| +.||+||||||+||++ +.++.+||+|||++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNA-YGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGT-TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EecCCCCCHHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 9999999999999765422 23899999999999999999999 8899999999999999 77788999999999
Q ss_pred cccccccccccccccccccccCCCcCCC--------CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHH
Q 002155 830 RLISACETHVSTDIAGTFGYIPPEYGQS--------GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
+...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............ +..
T Consensus 164 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~---~~~ 238 (396)
T 4eut_A 164 RELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV---MYK 238 (396)
T ss_dssp EECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHH---HHH
T ss_pred eEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHH---HHH
Confidence 8765322 2234578999999998754 46788999999999999999999999654332222222 222
Q ss_pred HhhcCccc-------------ccc-CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 902 KMKKGQAA-------------DVL-DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 902 ~~~~~~~~-------------~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
........ .+. ...............+.+++.+||+.||++||++.|+++.++++.
T Consensus 239 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il 308 (396)
T 4eut_A 239 IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (396)
T ss_dssp HHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred HhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence 22211100 000 001112234778888999999999999999999999999998874
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-39 Score=351.84 Aligned_cols=249 Identities=26% Similarity=0.353 Sum_probs=194.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc----CCCCEEEEEEccccc----hhhHHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL----PDGKTVAVKKLSQAK----TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... ......+.+|+.+++.++||||+++++++..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46788999999999999999986 468999999987542 2234557789999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.|+||||+++|+|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEeCCCCCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 999999999999999998754 5788999999999999999999 889999999999999999999999999999
Q ss_pred cccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 830 RLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+.....
T Consensus 169 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~-~~~~i~~~~~- 238 (327)
T 3a62_A 169 KESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK-------K-TIDKILKCKL- 238 (327)
T ss_dssp -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-------H-HHHHHHHTCC-
T ss_pred cccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH-------H-HHHHHHhCCC-
Confidence 7543221 2233457999999999999889999999999999999999999999653211 1 1122221111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
.. +......+.+++.+||+.||++|| +++|++++
T Consensus 239 -----~~----p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 239 -----NL----PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp -----CC----CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred -----CC----CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 00 111234678899999999999999 78888764
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=360.62 Aligned_cols=267 Identities=19% Similarity=0.224 Sum_probs=202.2
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcCC------CCEEEEEEccccchhh-----------HHHHHHHHHHHhcCCCCceec
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALPD------GKTVAVKKLSQAKTQG-----------HREFTAEMETLGKVKHQNLVP 739 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~ 739 (959)
..++|++.+.||+|+||.||+|++.+ ++.||||++....... ...+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 35689999999999999999998764 4789999986543211 112335666778889999999
Q ss_pred cccceecC----CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 002155 740 LLGYCSFD----EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL 815 (959)
Q Consensus 740 ~~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 815 (959)
+++++... ...++||||+ +++|.+++.... ..+++.+++.++.||+.||+||| +.||+||||||+||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill 185 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA---KRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEE
Confidence 99998664 4579999999 999999998753 35899999999999999999999 7899999999999999
Q ss_pred C--CCCcEEEcccccccccccccccc------cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 002155 816 N--EEFEAKVADFGLARLISACETHV------STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEF 887 (959)
Q Consensus 816 ~--~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~ 887 (959)
+ .++.+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~ 265 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL 265 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 8 88999999999998764322211 123459999999999999999999999999999999999999996432
Q ss_pred ccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 888 KDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+ .............. .....++.... ......+.+++..||+.||++||+++++++.|+++.
T Consensus 266 ~~---~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 266 KD---PKYVRDSKIRYREN-IASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp TC---HHHHHHHHHHHHHC-HHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred cC---HHHHHHHHHHhhhh-HHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 22 11111111111111 11111111100 112346788999999999999999999999998874
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=359.30 Aligned_cols=267 Identities=20% Similarity=0.256 Sum_probs=203.1
Q ss_pred hcCCCCCCeeccC--CCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDG--GFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.++||+| +||.||+|++. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++..++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4679999999999 99999999976 68999999987543 3345668889999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++..... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFM--DGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 9999999999999987532 34889999999999999999999 889999999999999999999999999998654
Q ss_pred ccccc------cccccccccccccCCCcCCC--CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh
Q 002155 833 SACET------HVSTDIAGTFGYIPPEYGQS--GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904 (959)
Q Consensus 833 ~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (959)
..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ...........
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~ 255 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ---MLLEKLNGTVP 255 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTT---HHHHC------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH---HHHHHhcCCCC
Confidence 32111 11123468899999999887 578999999999999999999999996532211 00000000000
Q ss_pred c----------------------Ccccccc-----Cc----cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 905 K----------------------GQAADVL-----DP----TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 905 ~----------------------~~~~~~~-----~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ....... .+ .............+.+++.+||+.||++|||++|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 256 CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp --------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0 0000000 00 00001122344568899999999999999999999875
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=345.81 Aligned_cols=254 Identities=28% Similarity=0.463 Sum_probs=197.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
++|++.+.||+|+||.||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++. +..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence 56888999999999999999984 788999998643 34567889999999999999999999886 45899999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc-EEEcccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE-AKVADFGLARLISACET 837 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-~kl~Dfg~~~~~~~~~~ 837 (959)
+|+|.+++.... ....+++..++.++.|+++|++|||+....||+||||||+||+++.++. +||+|||.+......
T Consensus 83 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 83 GGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 999999998643 2234788999999999999999999322289999999999999988876 799999999765321
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||...... ... +........ .+...
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~-~~~~~~~~~-----~~~~~ 226 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP-----AFR-IMWAVHNGT-----RPPLI 226 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS-----HHH-HHHHHHTTC-----CCCCB
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc-----HHH-HHHHHhcCC-----CCCcc
Confidence 22346899999999999999999999999999999999999998643211 111 111111111 11111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. .....+.+++.+||+.||++|||++++++.|+++.
T Consensus 227 ~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 227 K----NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred c----ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 1 22346788999999999999999999999999875
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-39 Score=354.16 Aligned_cols=266 Identities=26% Similarity=0.375 Sum_probs=197.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHH--HHHHHhcCCCCceecccccee-----cCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQNLVPLLGYCS-----FDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~--e~~~l~~l~h~niv~~~~~~~-----~~~~~ 750 (959)
.++|++.+.||+|+||.||+|+. +++.||||++..... ..+.. |+..+..++||||+++++++. .....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 36788899999999999999987 689999999864432 23333 444455689999999987442 23356
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCC---------CeEeCCCCCCCEEECCCCcE
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP---------HIIHRDIKASNILLNEEFEA 821 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~---------~ivH~dlk~~Nill~~~~~~ 821 (959)
++||||+++|+|.+++.... .++..++.++.|++.||+||| +. ||+||||||+||+++.++.+
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT-----SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred EEEEecCCCCcHHHHHhhcc-----cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcE
Confidence 89999999999999997654 588899999999999999999 77 99999999999999999999
Q ss_pred EEccccccccccccc-------ccccccccccccccCCCcCCC-------CCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 002155 822 KVADFGLARLISACE-------THVSTDIAGTFGYIPPEYGQS-------GRSTTRGDVYSFGVILLELVTGKEPTGPEF 887 (959)
Q Consensus 822 kl~Dfg~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~il~elltg~~p~~~~~ 887 (959)
||+|||+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 999999998664321 111224469999999999876 355678999999999999999988775433
Q ss_pred ccccCCch----------HHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 888 KDIEGGNL----------VGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 888 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
........ ................+ +. ...........+.+++.+||+.||++|||++|+++.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKF-PE-AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCC-CT-TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred chhHHHHhhhcccCCCchHHHHHhhhcccccCCCC-Cc-ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 22111110 11111111111111110 11 11223446678999999999999999999999999999874
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=353.08 Aligned_cols=261 Identities=29% Similarity=0.442 Sum_probs=210.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc------CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL------PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 749 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+.+++++ +||||+++++++..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 46788899999999999999984 246789999987543 33456788999999999 99999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCC--------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGS--------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL 815 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 815 (959)
.++||||+++|+|.+++...... ...+++.+++.++.|++.||+||| +.|++||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEE
Confidence 99999999999999999875421 224899999999999999999999 8899999999999999
Q ss_pred CCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCC
Q 002155 816 NEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGG 893 (959)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 893 (959)
+.++.+||+|||.+......... ......+|+.|+|||.+.+..++.++||||+|+++|||++ |..||......
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---- 254 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD---- 254 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS----
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch----
Confidence 99999999999999876543222 1233457889999999888899999999999999999999 99998653221
Q ss_pred chHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 894 NLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
......+..... +.. .......+.+++.+||+.||++|||++|++++|+++.
T Consensus 255 ---~~~~~~~~~~~~-----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 255 ---SKFYKMIKEGFR-----MLS----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp ---HHHHHHHHHTCC-----CCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---hHHHHHhccCCC-----CCC----cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 112222222111 100 1122346788999999999999999999999999874
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=343.90 Aligned_cols=254 Identities=25% Similarity=0.354 Sum_probs=198.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|.+.+.||+|+||.||+|+.. ++..||+|++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 357889999999999999999875 68899999987543 3345778999999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE---CCCCcEEEccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLI 832 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~ 832 (959)
|+++|+|.+++.........+++..++.++.|++.||+||| +.||+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999998765333346899999999999999999999 8899999999999999 45678999999999765
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
... .......||+.|+|||.+. ..++.++||||+|+++|||++|+.||...... .+.............
T Consensus 178 ~~~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--------~~~~~~~~~~~~~~~ 246 (285)
T 3is5_A 178 KSD--EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--------EVQQKATYKEPNYAV 246 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCC
T ss_pred CCc--ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--------HHHhhhccCCccccc
Confidence 432 2233457899999999875 56899999999999999999999998653211 111111111111000
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. .......+.+++.+||+.||++|||++|++++
T Consensus 247 ---~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 247 ---E----CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp ---------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ---c----cCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 01123467789999999999999999999864
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=347.63 Aligned_cols=256 Identities=30% Similarity=0.450 Sum_probs=208.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.+.||+|+||.||+|++.+++.||||++.... ...+.+.+|++++++++||||+++++++. ++..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 35788899999999999999998888899999987543 23567889999999999999999999886 45689999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++.... ...+++.+++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+........
T Consensus 90 ~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 90 ENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp TTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred CCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 9999999997542 125889999999999999999999 88999999999999999999999999999987654333
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......++..|+|||.+.+..++.++||||+|+++|||++ |..||...... .+...+..... +..
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~~~~~-----~~~ 231 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--------EVIQNLERGYR-----MVR 231 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCC-----CCC
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--------HHHHHHhcccC-----CCC
Confidence 33334457789999999888889999999999999999999 89998643211 12222222211 111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.......+.+++.+||+.||++|||+.++++.|+++.
T Consensus 232 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 232 ----PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp ----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 1122346888999999999999999999999999874
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-39 Score=355.57 Aligned_cols=260 Identities=30% Similarity=0.455 Sum_probs=208.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC--------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP--------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFD 747 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 747 (959)
.++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+++++++ +||||+++++++..+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467889999999999999999863 46789999987543 34456788999999999 899999999999999
Q ss_pred CceEEEEEeccCCCHHHHHhhhcCC------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTGS------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL 815 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 815 (959)
+..++||||+++|+|.+++...... ...+++.+++.++.|++.||+||| +.||+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 9999999999999999999875421 234889999999999999999999 8899999999999999
Q ss_pred CCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCC
Q 002155 816 NEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGG 893 (959)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 893 (959)
+.++.+||+|||.++........ ......+++.|+|||++.+..++.++||||+|+++|||++ |..||.....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----- 265 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----- 265 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH-----
Confidence 99999999999999866532221 1223456789999999888889999999999999999999 9999864311
Q ss_pred chHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 894 NLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..+...+...... .. ...+...+.+++.+||+.||++||+++|+++.|+++.
T Consensus 266 ---~~~~~~~~~~~~~-----~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~ 317 (334)
T 2pvf_A 266 ---EELFKLLKEGHRM-----DK----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317 (334)
T ss_dssp ---HHHHHHHHHTCCC-----CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHHHHHHhcCCCC-----CC----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1122222222111 11 1123346788999999999999999999999999874
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-38 Score=363.73 Aligned_cols=347 Identities=20% Similarity=0.159 Sum_probs=224.7
Q ss_pred EEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEccccc
Q 002155 165 EFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNN 244 (959)
Q Consensus 165 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 244 (959)
.++.+++.++ .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|.|+++.|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 4556666665 4554442 466666666666666556666666666666666666666666666666666666666666
Q ss_pred CCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEc
Q 002155 245 LSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLL 324 (959)
Q Consensus 245 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L 324 (959)
++.+.+..|..+++|++|+|++|++. +..+..+..+++|+.|++
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~------------------------------------~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIV------------------------------------ILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCC------------------------------------EECTTTTTTCTTCCEEEE
T ss_pred CCccCcccccCCCCCCEEECCCCccc------------------------------------cCChhHccccccCCEEEC
Confidence 66555555666666666666655543 123344555555666666
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCC
Q 002155 325 NNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGK 404 (959)
Q Consensus 325 ~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 404 (959)
++|.+++..+..|..+++|++|++++|++++..+..|..+++|+.|++++|.+.+..+..|..+++|+.|++++|.+.+.
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~ 215 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDT 215 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCE
T ss_pred CCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccc
Confidence 66666555555566666666666666665554444555555555555555555555555555555555555555554444
Q ss_pred CCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCcccc
Q 002155 405 VPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLG 484 (959)
Q Consensus 405 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~ 484 (959)
.+.......+|++|++++|+++...+..+..+++|+.|+|++|++ ++..+..|.
T Consensus 216 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l--------------------------~~~~~~~~~ 269 (477)
T 2id5_A 216 MTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPI--------------------------STIEGSMLH 269 (477)
T ss_dssp ECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCC--------------------------CEECTTSCT
T ss_pred cCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcC--------------------------CccChhhcc
Confidence 444433344555555555555533334455555555555555554 444556677
Q ss_pred CccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccCCCcccc
Q 002155 485 NLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKIS 564 (959)
Q Consensus 485 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~ 564 (959)
++++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|++++|++.+..+..+.......+.
T Consensus 270 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~ 349 (477)
T 2id5_A 270 ELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLN 349 (477)
T ss_dssp TCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSC
T ss_pred ccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccc
Confidence 88999999999999998889999999999999999999998888888999999999999999998766555555566677
Q ss_pred ccCCCCCCCCCC
Q 002155 565 LTGNKDLCGKII 576 (959)
Q Consensus 565 l~~N~~~c~~~~ 576 (959)
+.++...|+.|.
T Consensus 350 ~~~~~~~C~~p~ 361 (477)
T 2id5_A 350 FNRQQPTCATPE 361 (477)
T ss_dssp CTTCCCBEEESG
T ss_pred cCccCceeCCch
Confidence 888888886543
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=340.70 Aligned_cols=250 Identities=27% Similarity=0.434 Sum_probs=183.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46788999999999999999986 478999999986432 22346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.... ..+++..++.++.|+++|++||| +.|++||||||+||+++.++.+||+|||.+....
T Consensus 90 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV---KPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EECCTTEEHHHHHHTCS---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 99999999999998643 35889999999999999999999 8899999999999999999999999999997654
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.... ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||........ ...... .....
T Consensus 164 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------~~~~~~---~~~~~ 231 (278)
T 3cok_A 164 MPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT--------LNKVVL---ADYEM 231 (278)
T ss_dssp -----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CCS---SCCCC
T ss_pred CCCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH--------HHHHhh---cccCC
Confidence 3221 22235689999999999988899999999999999999999999865322110 001100 01101
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+ ......+.+++.+||+.||++|||+++++++
T Consensus 232 ~-------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 232 P-------SFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp C-------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred c-------cccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 1 1123467889999999999999999999863
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-39 Score=369.75 Aligned_cols=256 Identities=23% Similarity=0.325 Sum_probs=207.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.++||+|+||.||+|+.+ +|+.||+|++.... ......+..|+.++++++||||+++++++...+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367889999999999999999975 68999999986542 23346688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||++||+|.+++.........+++..++.++.||+.||+||| +.||+||||||+||+++.++++||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999999999875544456899999999999999999999 8899999999999999999999999999998764
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...+...+......
T Consensus 341 ~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~----~~~~~~~i~~~~~~---- 411 (543)
T 3c4z_A 341 AGQ-TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE----NKELKQRVLEQAVT---- 411 (543)
T ss_dssp TTC-CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC----HHHHHHHHHHCCCC----
T ss_pred CCC-cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh----HHHHHHHHhhcccC----
Confidence 322 222345899999999999999999999999999999999999999976432211 11222222221110
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM-----LHVLK 951 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~ell~ 951 (959)
.+......+.+++.+||+.||++||++ +++++
T Consensus 412 ------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 412 ------YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp ------CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred ------CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 011233467889999999999999964 66664
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-39 Score=371.37 Aligned_cols=254 Identities=26% Similarity=0.361 Sum_probs=207.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.++||+|+||.||+|+.+ +|+.||+|++.... ......+.+|+.+++.++||||+++++++.+++..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999875 68999999986532 23345678999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||++||+|.+++.... ...+++..++.++.||+.||+||| +.||+||||||+||+++.++++||+|||+++...
T Consensus 263 mEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp ECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 99999999999997643 234899999999999999999999 8899999999999999999999999999998764
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
... .....+||+.|+|||++.+..++.++||||+||++|||++|..||........ ...+...+......
T Consensus 338 ~~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~----~~~i~~~i~~~~~~---- 407 (576)
T 2acx_A 338 EGQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK----REEVERLVKEVPEE---- 407 (576)
T ss_dssp TTC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC----HHHHHHHHHHCCCC----
T ss_pred cCc--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh----HHHHHHHhhccccc----
Confidence 322 22345899999999999998999999999999999999999999976432211 12222222221110
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
.+......+.+++.+||+.||++|| +++|++++
T Consensus 408 ------~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 408 ------YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp ------CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ------CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 0112334678899999999999999 78888764
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=339.02 Aligned_cols=251 Identities=23% Similarity=0.304 Sum_probs=205.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|++. ++..||+|++........+.+.+|++++++++||||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 467899999999999999999876 5779999999876666677899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE---CCCCcEEEcccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLIS 833 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~~ 833 (959)
+++++|.+++.... .+++.+++.++.|++.|++||| +.||+||||||+||++ +.++.+||+|||.+....
T Consensus 88 ~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 88 CTGGELFERVVHKR----VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp CCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred cCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 99999999987754 5889999999999999999999 8899999999999999 788999999999997765
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.. .......||+.|+|||.+.+ .++.++||||+|+++|||++|..||...... .....+.......
T Consensus 161 ~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~--- 226 (277)
T 3f3z_A 161 PG--KMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS--------EVMLKIREGTFTF--- 226 (277)
T ss_dssp TT--SCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCC---
T ss_pred Cc--cchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhCCCCC---
Confidence 32 22334578999999998765 4899999999999999999999998653211 1222222221110
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+... .......+.+++.+||+.||++||++.|++++
T Consensus 227 ~~~~---~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 227 PEKD---WLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp CHHH---HTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred Cchh---hhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 00123467889999999999999999999863
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=352.63 Aligned_cols=261 Identities=23% Similarity=0.248 Sum_probs=201.5
Q ss_pred HHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc-----chhhHHHHHHHHHHHhcCCCCceeccccceecCC
Q 002155 675 LEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA-----KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE 748 (959)
Q Consensus 675 ~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 748 (959)
....++|++.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|++++++++||||+++++++.+++
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 346678999999999999999999875 6889999998643 2344567889999999999999999999999999
Q ss_pred ceEEEEEeccCCCHHHHHhhhcC------------------------------------CccccCHHHHHHHHHHHHHHH
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTG------------------------------------SLEVLGWDKRYKIACGAARGL 792 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~------------------------------------~~~~l~~~~~~~i~~~i~~~l 792 (959)
..++||||+++|+|.+++..... ....+++..++.++.|++.|+
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 99999999999999999852110 012346778889999999999
Q ss_pred HHHHhcCCCCeEeCCCCCCCEEECCCC--cEEEcccccccccccccc---cccccccccccccCCCcCCC--CCCCCcCc
Q 002155 793 AFLHHGFTPHIIHRDIKASNILLNEEF--EAKVADFGLARLISACET---HVSTDIAGTFGYIPPEYGQS--GRSTTRGD 865 (959)
Q Consensus 793 ~~LH~~~~~~ivH~dlk~~Nill~~~~--~~kl~Dfg~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~~~D 865 (959)
+||| +.||+||||||+||+++.++ .+||+|||+++....... .......||+.|+|||++.+ ..++.++|
T Consensus 182 ~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 9999 78999999999999998776 899999999986543221 12344578999999998865 67899999
Q ss_pred chhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC
Q 002155 866 VYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT 945 (959)
Q Consensus 866 vwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 945 (959)
|||+||++|||++|+.||...... .............. .+ ........+.+++.+||+.||++||+
T Consensus 259 iwslG~il~el~~g~~pf~~~~~~-------~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~li~~~l~~~p~~Rps 324 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGVNDA-------DTISQVLNKKLCFE--NP-----NYNVLSPLARDLLSNLLNRNVDERFD 324 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCCTT--SG-----GGGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred HHHHHHHHHHHHHCCCCCCCCChH-------HHHHHHHhcccccC--Cc-----ccccCCHHHHHHHHHHcCCChhHCCC
Confidence 999999999999999998653221 11222222111100 00 11123346788999999999999999
Q ss_pred HHHHHHH
Q 002155 946 MLHVLKF 952 (959)
Q Consensus 946 ~~ell~~ 952 (959)
+.|++++
T Consensus 325 ~~~~l~h 331 (345)
T 3hko_A 325 AMRALQH 331 (345)
T ss_dssp HHHHHHS
T ss_pred HHHHhcC
Confidence 9999874
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=357.45 Aligned_cols=261 Identities=27% Similarity=0.431 Sum_probs=205.3
Q ss_pred CCCCCeeccCCCeEEEEEEcC-----CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecC--CceEE
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-----DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD--EEKLL 752 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 752 (959)
|++.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 478899999999999998643 57899999987543 34456789999999999999999999999774 56799
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.... +++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+...
T Consensus 113 v~e~~~~~~L~~~l~~~~-----~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EECCCTTCBHHHHGGGSC-----CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEecccCCcHHHHHhhCC-----CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCccccccc
Confidence 999999999999997643 889999999999999999999 889999999999999999999999999999876
Q ss_pred ccccc--cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc------cCCc-hHHHHHHHh
Q 002155 833 SACET--HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI------EGGN-LVGWVFQKM 903 (959)
Q Consensus 833 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~------~~~~-~~~~~~~~~ 903 (959)
..... .......++..|+|||++.+..++.++||||+|+++|||++|+.||....... .... ....+...+
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL 264 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHH
Confidence 54322 12233467889999999988889999999999999999999999986432110 0000 000111111
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.... .......+...+.+++.+||+.||++|||++|+++.|+++..
T Consensus 265 ~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 265 ERGE---------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp HTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hccc---------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 1111 111122334578899999999999999999999999998853
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=345.49 Aligned_cols=245 Identities=24% Similarity=0.301 Sum_probs=192.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.++||+|+||+||+|++. +|+.||||++.... ......+..|+..+..+ +||||++++++|.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57999999999999999999976 78999999876432 22333445555555554 8999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+ +++|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 137 e~~-~~~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWG---ASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp ECC-CCBHHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred ecc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 999 679999887764 35899999999999999999999 78999999999999999999999999999976643
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. .......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... ....+..... .+
T Consensus 210 ~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~-----------~~~~~~~~~~----~~ 271 (311)
T 3p1a_A 210 A--GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE-----------GWQQLRQGYL----PP 271 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH-----------HHHHHTTTCC----CH
T ss_pred C--CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc-----------HHHHHhccCC----Cc
Confidence 2 22334568999999998875 78999999999999999999977754310 1122222111 11
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... ......+.+++.+||+.||++|||++|++++
T Consensus 272 ~~~----~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 272 EFT----AGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccc----cCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 111 1123468889999999999999999999874
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-39 Score=350.86 Aligned_cols=257 Identities=25% Similarity=0.378 Sum_probs=195.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCce---
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK--- 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~--- 750 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++.... ......+.+|+.++++++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46788999999999999999996 478999999987542 23345688999999999999999999998765543
Q ss_pred -EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 751 -LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 751 -~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
|+||||+++++|.++++... .+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred cEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 99999999999999998754 5889999999999999999999 889999999999999999999999999999
Q ss_pred cccccccc--cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 830 RLISACET--HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 830 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
+....... .......||+.|+|||.+.+..++.++||||+|+++|||++|+.||..... ............
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-------~~~~~~~~~~~~ 236 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-------VSVAYQHVREDP 236 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHCCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHhcCCC
Confidence 86643222 122335689999999999988999999999999999999999999965321 111222222211
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH-HHHh
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK-FLKE 955 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~-~L~~ 955 (959)
. .+... .......+.+++.+||+.||++||++.++++ .+.+
T Consensus 237 ~----~~~~~---~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 278 (311)
T 3ork_A 237 I----PPSAR---HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278 (311)
T ss_dssp C----CHHHH---STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred C----Ccccc---cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence 1 01000 1113346788999999999999997666554 4433
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=357.53 Aligned_cols=252 Identities=21% Similarity=0.272 Sum_probs=191.4
Q ss_pred cCCCCC-CeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHh-cCCCCceeccccceec----CCceE
Q 002155 679 NNFCKT-NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLG-KVKHQNLVPLLGYCSF----DEEKL 751 (959)
Q Consensus 679 ~~f~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~----~~~~~ 751 (959)
++|.+. ++||+|+||+||+|++. +++.||||++... ..+.+|+.++. ..+||||++++++|.. +...|
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456665 68999999999999875 6889999998632 34567888764 4589999999998865 56789
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---CCcEEEccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE---EFEAKVADFGL 828 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~ 828 (959)
+||||+++|+|.+++.... ...+++.+++.++.||+.||+||| +.||+||||||+||+++. ++.+||+|||+
T Consensus 136 lv~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp EEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEeCCCCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEeccc
Confidence 9999999999999998643 235899999999999999999999 789999999999999987 78999999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
++..... .......||+.|+|||++.+..++.++|||||||++|||++|..||............. ..+..+..
T Consensus 211 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~----~~i~~~~~ 284 (400)
T 1nxk_A 211 AKETTSH--NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK----TRIRMGQY 284 (400)
T ss_dssp CEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHH----HHHHHTCC
T ss_pred ccccCCC--CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHH----HHHHcCcc
Confidence 9865422 22334578999999999999999999999999999999999999997543321111121 22222111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. +. .........+.+++.+||+.||++|||++|++++
T Consensus 285 ~~---~~---~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 285 EF---PN---PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp CC---CT---TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cC---CC---cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 10 10 0112234567899999999999999999999975
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=363.59 Aligned_cols=247 Identities=25% Similarity=0.388 Sum_probs=204.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|.+.+.||+|+||.||+|++. +|+.||||++.... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57888999999999999999875 79999999986542 223467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... .+++..++.++.||+.|++||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 96 E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 96 EYVSGGELFDYICKNG----RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp ECCSSEEHHHHTTSSS----SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 9999999999997543 5899999999999999999999 89999999999999999999999999999987643
Q ss_pred ccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
. ......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... . .....+..+... .
T Consensus 169 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-------~-~~~~~i~~~~~~---~ 235 (476)
T 2y94_A 169 G--EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-------P-TLFKKICDGIFY---T 235 (476)
T ss_dssp T--CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS-------H-HHHHHHHTTCCC---C
T ss_pred c--ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH-------H-HHHHHHhcCCcC---C
Confidence 2 22334579999999999888776 6899999999999999999999964321 1 122222222110 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
| ......+.+++.+||+.||++|||++|++++
T Consensus 236 p-------~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 236 P-------QYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp C-------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred C-------ccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 1 1122467889999999999999999999874
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=354.78 Aligned_cols=245 Identities=23% Similarity=0.301 Sum_probs=192.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHH-HhcCCCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMET-LGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.++||+|+||.||+|+.+ +++.||+|++.+.. ......+..|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 467999999999999999999976 58899999987543 2223445667666 577899999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.... .+++..++.++.||+.||+||| +.||+||||||+||+++.++++||+|||+++..
T Consensus 117 v~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 999999999999998754 5788999999999999999999 889999999999999999999999999999764
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
... .......+||+.|+|||++.+..++.++||||+||++|||++|..||..... . .+...+...... +
T Consensus 190 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-------~-~~~~~i~~~~~~--~ 258 (373)
T 2r5t_A 190 IEH-NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-------A-EMYDNILNKPLQ--L 258 (373)
T ss_dssp BCC-CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-------H-HHHHHHHHSCCC--C
T ss_pred ccC-CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-------H-HHHHHHHhcccC--C
Confidence 322 2233456899999999999999999999999999999999999999965321 1 122222222110 0
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLH 948 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 948 (959)
+ ......+.+++.+||+.||++||++.+
T Consensus 259 -~-------~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 259 -K-------PNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp -C-------SSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred -C-------CCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 1 112346788999999999999999853
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=347.02 Aligned_cols=252 Identities=23% Similarity=0.304 Sum_probs=204.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh------hHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ------GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|++. +|+.||+|++...... ..+.+.+|+.++++++||||+++++++..++..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 457899999999999999999875 6899999998653221 356789999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC----cEEEccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF----EAKVADF 826 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Df 826 (959)
++||||+++++|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS----CEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 99999999999999997643 5889999999999999999999 88999999999999999887 7999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
|.+...... .......||+.|+|||++.+..++.++||||+|+++|||++|..||...... . ....+...
T Consensus 164 g~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~-~~~~i~~~ 233 (321)
T 2a2a_A 164 GLAHEIEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-------E-TLANITSV 233 (321)
T ss_dssp TTCEECCTT--CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-------H-HHHHHHTT
T ss_pred ccceecCcc--ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH-------H-HHHHHHhc
Confidence 999876532 2223456899999999999899999999999999999999999998643211 1 11122211
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ..++.... .....+.+++.+||+.||++|||++|++++
T Consensus 234 ~~--~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 234 SY--DFDEEFFS----HTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CC--CCCHHHHT----TCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred cc--ccChhhhc----ccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 10 01111111 122457889999999999999999999874
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-38 Score=338.07 Aligned_cols=252 Identities=25% Similarity=0.359 Sum_probs=204.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 468999999999999999999875 58999999986532 334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc---EEEcccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE---AKVADFGLARL 831 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~~~~ 831 (959)
||+++++|.+++.... .+++..++.++.|++.|++||| +.||+||||||+||+++.++. +||+|||.+..
T Consensus 85 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 9999999999887654 5889999999999999999999 889999999999999986655 99999999976
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.... .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||...... .....+.......
T Consensus 158 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~- 226 (284)
T 3kk8_A 158 VNDS--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--------RLYAQIKAGAYDY- 226 (284)
T ss_dssp CCSS--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCC-
T ss_pred cccC--ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--------HHHHHHHhccccC-
Confidence 6432 2223457899999999999999999999999999999999999998643211 1222222221110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+. .........+.+++.+||+.||++|||++|++++
T Consensus 227 --~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 227 --PS---PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp --CT---TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred --Cc---hhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 10 0111233467889999999999999999999874
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-39 Score=352.23 Aligned_cols=266 Identities=26% Similarity=0.396 Sum_probs=209.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-----CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCC--ce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-----PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE--EK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~ 750 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 35688899999999999999983 368899999998766666778999999999999999999999886544 78
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++++|.+++.... ..+++.+++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||.+.
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp EEEECCCTTCBHHHHHHHST---TSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEECCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchh
Confidence 99999999999999998754 35889999999999999999999 8899999999999999999999999999998
Q ss_pred ccccccccc--cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc-------cC-CchHHHHH
Q 002155 831 LISACETHV--STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI-------EG-GNLVGWVF 900 (959)
Q Consensus 831 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~-------~~-~~~~~~~~ 900 (959)
......... .....++..|+|||.+.+..++.++||||+|+++|||++|..||....... .. ......+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHH
Confidence 765432211 223456778999999888889999999999999999999999975421100 00 00111111
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
+.+..... + .....+...+.+++.+||+.||++|||++|+++.|++++.
T Consensus 274 ~~~~~~~~-----~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 274 ELLKNNGR-----L----PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHHHTTCC-----C----CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhhcCCC-----C----CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 22221111 1 1112234568889999999999999999999999999864
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=342.95 Aligned_cols=262 Identities=19% Similarity=0.272 Sum_probs=202.6
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccce-ecCCceEEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC-SFDEEKLLVY 754 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~ 754 (959)
..++|++.+.||+|+||.||+|++ .+++.||||++..... ...+.+|+.+++.++|++++..++++ ..++..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999986 4788999998654322 23477899999999988877776655 5667789999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE---CCCCcEEEcccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARL 831 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~ 831 (959)
||+ +++|.+++.... ..+++..++.++.|++.|++||| +.||+||||||+||++ +.++.+||+|||.++.
T Consensus 85 e~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp ECC-CCBHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred Ecc-CCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 999 999999998543 35899999999999999999999 8899999999999999 7889999999999987
Q ss_pred ccccccc------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhc
Q 002155 832 ISACETH------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK 905 (959)
Q Consensus 832 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (959)
....... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||......................
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST 237 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc
Confidence 6543221 2234578999999999999999999999999999999999999997643332222222211111111
Q ss_pred CccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. .. ... ......+.+++.+||+.||++|||++++++.|+++.
T Consensus 238 ~-~~-----~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~ 279 (296)
T 4hgt_A 238 P-IE-----VLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp C-HH-----HHT----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred h-hh-----hhh----ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 0 00 000 112346889999999999999999999999999874
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=355.90 Aligned_cols=255 Identities=27% Similarity=0.457 Sum_probs=200.5
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCE----EEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKT----VAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
++|++.++||+|+||.||+|++. +++. ||+|.+.... ......+.+|+.+++.++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 57888999999999999999864 4443 7778765332 223345678999999999999999999886 567899
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 92 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHR---GALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEECCTTCBSHHHHHSSG---GGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEeCCCCCHHHHHHHcc---ccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCccccc
Confidence 999999999999997643 35788999999999999999999 889999999999999999999999999999876
Q ss_pred cccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 833 SACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 833 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
...... ......++..|+|||.+.+..++.++||||+||++|||++ |..||...... . +...+......
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~----~~~~~~~~~~~- 236 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA----E----VPDLLEKGERL- 236 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT----H----HHHHHHTTCBC-
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH----H----HHHHHHcCCCC-
Confidence 543222 2234467889999999988899999999999999999999 99998653211 1 12222222111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..+.. +...+.+++.+||+.||++||++++++++|+++.
T Consensus 237 -~~~~~-------~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 237 -AQPQI-------CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp -CCCTT-------BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred -CCCCc-------CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111 1224678899999999999999999999999874
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-39 Score=346.84 Aligned_cols=256 Identities=23% Similarity=0.383 Sum_probs=205.9
Q ss_pred cCCCCCC-eeccCCCeEEEEEEcC---CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 679 NNFCKTN-IIGDGGFGTVYKAALP---DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~-~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
++|.+.+ .||+|+||.||+|.+. ++..||||++.... ....+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4555555 8999999999999854 57789999987643 34566788999999999999999999998 55679999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.... ..+++..++.++.|++.||+||| +.|++||||||+||+++.++.+||+|||.+....
T Consensus 88 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EECCTTEEHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEeCCCCCHHHHHHhCC---ccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 99999999999997543 35889999999999999999999 8899999999999999999999999999998764
Q ss_pred cccccc--cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 834 ACETHV--STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 834 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
...... .....+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...... . +...+..+..
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~----~~~~i~~~~~-- 231 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP----E----VMAFIEQGKR-- 231 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH----H----HHHHHHTTCC--
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH----H----HHHHHhcCCc--
Confidence 332221 123356889999999888889999999999999999998 99998653211 1 1222222211
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
+.. +......+.+++.+||+.||++||++.+++++|+++..
T Consensus 232 ---~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 272 (287)
T 1u59_A 232 ---MEC----PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 272 (287)
T ss_dssp ---CCC----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCC----CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111 11233568889999999999999999999999998753
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=342.63 Aligned_cols=261 Identities=19% Similarity=0.270 Sum_probs=205.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccce-ecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC-SFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++..... .+.+.+|+.+++.++|++++..+.++ ..++..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 56899999999999999999996 4789999999865432 24588999999999998877666655 56677899999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC---CCCcEEEccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN---EEFEAKVADFGLARLI 832 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~~~~~ 832 (959)
|+ +++|.+++.... ..+++.+++.++.|++.|++||| +.||+||||||+||+++ .++.+||+|||.+...
T Consensus 86 ~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp CC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred ec-CCCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 99 899999997543 35899999999999999999999 88999999999999994 7889999999999876
Q ss_pred cccccc------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 833 SACETH------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 833 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||......... .....+.......
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~ 237 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-QKYERISEKKMST 237 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-SHHHHHHHHHHHS
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh-hhhhhhcccccCC
Confidence 543221 123457899999999999999999999999999999999999999764332222 2222222211111
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
... ... ......+.+++.+||+.||++|||++++++.|+++.
T Consensus 238 ~~~-----~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 279 (296)
T 3uzp_A 238 PIE-----VLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp CHH-----HHT----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred chH-----HHH----hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence 000 000 112346888999999999999999999999999875
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=348.07 Aligned_cols=264 Identities=28% Similarity=0.328 Sum_probs=199.2
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-----hhhHHHHHHHHHHHhcCC---CCceeccccceecC
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-----TQGHREFTAEMETLGKVK---HQNLVPLLGYCSFD 747 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~ 747 (959)
..++|++.+.||+|+||.||+|++. +++.||||++.... ......+.+|+.+++.++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 3578999999999999999999964 68999999986432 112345667777777664 99999999998765
Q ss_pred C-----ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEE
Q 002155 748 E-----EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAK 822 (959)
Q Consensus 748 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 822 (959)
. ..++||||++ ++|.+++..... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+|
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP--PGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT--TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEE
Confidence 5 4799999997 599999987542 34899999999999999999999 88999999999999999999999
Q ss_pred EcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 823 VADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 823 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
|+|||.++..... .......||+.|+|||++.+..++.++||||+||++|||++|++||...... .....+...
T Consensus 161 l~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~i~~~ 234 (308)
T 3g33_A 161 LADFGLARIYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA----DQLGKIFDL 234 (308)
T ss_dssp ECSCSCTTTSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH----HHHHHHHHH
T ss_pred EeeCccccccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHH
Confidence 9999999866432 2234457899999999998899999999999999999999999999653221 112222222
Q ss_pred hhcCccccccCc---------cccCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKGQAADVLDP---------TVLTA----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~~~~~~~~~---------~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........+... ...+. ...+....+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 235 IGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp HCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 211111111000 00000 011234567889999999999999999999874
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=340.05 Aligned_cols=248 Identities=27% Similarity=0.418 Sum_probs=201.3
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
+.++|++.+.||+|+||.||+|++. +++.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3467899999999999999999865 57799999986432 2234568899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++...
T Consensus 87 v~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS----KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 999999999999998754 4889999999999999999999 899999999999999999999999999998654
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
.. .......|++.|+|||.+.+..++.++||||+|+++|||++|..||...... .....+.....
T Consensus 160 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~---- 224 (279)
T 3fdn_A 160 PS---SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--------ETYKRISRVEF---- 224 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCC----
T ss_pred Cc---ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--------HHHHHHHhCCC----
Confidence 32 2223457899999999999999999999999999999999999998643211 11222222111
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. +......+.+++.+||+.||++|||++|++++
T Consensus 225 --~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 225 --TF----PDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp --CC----CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred --CC----CCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 11123457789999999999999999999975
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-39 Score=352.15 Aligned_cols=256 Identities=27% Similarity=0.444 Sum_probs=200.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCC-----CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPD-----GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
++|+..+.||+|+||.||+|++.. +..||||++.... ......+.+|+.++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 467778999999999999998642 2369999987543 3345568899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.++..
T Consensus 124 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKD---GEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEECCTTEEHHHHHHHTT---TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 999999999999998653 35889999999999999999999 789999999999999999999999999999876
Q ss_pred cccccc--ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 833 SACETH--VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 833 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
...... ......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||..... ..+...+..+..
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--------~~~~~~~~~~~~- 268 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--------HEVMKAINDGFR- 268 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTTCC-
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHHCCCc-
Confidence 432211 1122346789999999988899999999999999999999 9999854321 112222222211
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
+. ........+.+++.+||+.||++||++.++++.|+++.
T Consensus 269 ----~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 308 (333)
T 1mqb_A 269 ----LP----TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308 (333)
T ss_dssp ----CC----CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ----CC----CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11 11123446788999999999999999999999999874
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-39 Score=354.46 Aligned_cols=243 Identities=24% Similarity=0.336 Sum_probs=200.8
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--------hhHHHHHHHHHHHhcCCCCceeccccceecC
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--------QGHREFTAEMETLGKVKHQNLVPLLGYCSFD 747 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 747 (959)
..++|++.+.||+|+||.||+|++. +++.||||++..... .....+.+|+.++++++||||+++++++..+
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4578999999999999999999864 688999999865421 1233567899999999999999999999999
Q ss_pred CceEEEEEeccCC-CHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 748 EEKLLVYEYMVNG-SLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 748 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
+..++||||+.+| +|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP----RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999777 9999997653 5899999999999999999999 889999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhc
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK 905 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (959)
|+++...... ......||+.|+|||++.+..+ +.++||||+||++|||++|..||...... ...
T Consensus 175 g~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------------~~~ 239 (335)
T 3dls_A 175 GSAAYLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-------------VEA 239 (335)
T ss_dssp TTCEECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------TTT
T ss_pred ccceECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------Hhh
Confidence 9998765322 2234578999999999888877 78999999999999999999998642111 000
Q ss_pred CccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
....+. .....+.+++.+||+.||++|||++|++++
T Consensus 240 ----~~~~~~-------~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 240 ----AIHPPY-------LVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----CCCCSS-------CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----ccCCCc-------ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000111 123467889999999999999999999985
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-39 Score=358.58 Aligned_cols=256 Identities=30% Similarity=0.456 Sum_probs=193.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC--CC--CEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceec-CCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP--DG--KTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSF-DEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~--~~--~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~l 752 (959)
..|++.++||+|+||.||+|++. ++ ..||||.+... .....+.+.+|+.++++++||||+++++++.. ++..++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 35677889999999999999863 22 36899988653 33456778999999999999999999998654 567899
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.++++... ..+++.+++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 169 v~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EEECCTTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEECCCCCCHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccc
Confidence 999999999999997654 34788999999999999999999 889999999999999999999999999999865
Q ss_pred cccccc---ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 833 SACETH---VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 833 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
...... ......+++.|+|||.+.+..++.++|||||||++|||++ |.+||.... ..+.... +..+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~----~~~~~~~----~~~~~~ 314 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----TFDITVY----LLQGRR 314 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC----SSCHHHH----HHTTCC
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC----HHHHHHH----HHcCCC
Confidence 432211 1223456789999999988899999999999999999999 566664321 1222222 221111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
...| ..+...+.+++.+||+.||++||+++|+++.|+++.
T Consensus 315 --~~~p-------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~ 354 (373)
T 3c1x_A 315 --LLQP-------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354 (373)
T ss_dssp --CCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1111 112346788999999999999999999999999874
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-38 Score=342.35 Aligned_cols=258 Identities=29% Similarity=0.445 Sum_probs=201.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC----CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccce-ecCCceE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD----GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYC-SFDEEKL 751 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~ 751 (959)
..+|++.++||+|+||.||+|++.+ ...||+|.+.... ....+.+.+|+.++++++||||+++++++ ..++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3568888999999999999998642 2358999887533 34456788999999999999999999985 4556789
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||+++|+|.++++... ..+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||.++.
T Consensus 104 ~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEEECCTTCBHHHHHHCTT---CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEEeCCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccc
Confidence 9999999999999997643 35788999999999999999999 88999999999999999999999999999986
Q ss_pred cccccc---cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCC-CCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 832 ISACET---HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK-EPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 832 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
...... .......+|+.|+|||.+.+..++.++||||+|+++|||++|. +||... . ....... .....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-~---~~~~~~~----~~~~~ 249 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-N---TFDITVY----LLQGR 249 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS-C---TTTHHHH----HHTTC
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC-C---HHHHHHH----HhcCC
Confidence 643221 1123345778999999998889999999999999999999955 454332 1 1122211 11111
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
. ...+ ......+.+++.+||+.||++|||++|+++.|+++..
T Consensus 250 ~--~~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 250 R--LLQP-------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp C--CCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C--CCCC-------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0 0111 1122468889999999999999999999999998853
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-39 Score=354.08 Aligned_cols=252 Identities=22% Similarity=0.292 Sum_probs=200.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|+.+ +++.||||++...... ..+|++++.++ +||||+++++++.+++..|+|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 467999999999999999999875 6889999998754332 34688888887 79999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC----CcEEEcccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE----FEAKVADFGLARL 831 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~~~~ 831 (959)
|+++|+|.+++.... .+++.++..++.||+.|++||| +.||+||||||+||++.++ +.+||+|||+++.
T Consensus 97 ~~~gg~L~~~i~~~~----~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~ 169 (342)
T 2qr7_A 97 LMKGGELLDKILRQK----FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169 (342)
T ss_dssp CCCSCBHHHHHHTCT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred CCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence 999999999997643 5899999999999999999999 8899999999999998543 3599999999987
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
..... .......||+.|+|||++.+..++.++||||+||++|||++|..||.....+ ....+...+..+....
T Consensus 170 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~~~~~i~~~~~~~- 242 (342)
T 2qr7_A 170 LRAEN-GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD-----TPEEILARIGSGKFSL- 242 (342)
T ss_dssp CBCTT-CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS-----CHHHHHHHHHHCCCCC-
T ss_pred CcCCC-CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC-----CHHHHHHHHccCCccc-
Confidence 64322 2233457899999999988878899999999999999999999999653211 1222333333322111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...........+.+++.+||+.||++||++.|++++
T Consensus 243 -----~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 243 -----SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp -----CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred -----CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111112234567889999999999999999999864
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-39 Score=356.39 Aligned_cols=251 Identities=22% Similarity=0.356 Sum_probs=195.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCC--CceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKH--QNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.+.||+|+||.||+|...+++.||||++... .....+.+.+|+.++++++| |||+++++++..+...++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 4678899999999999999999988999999998643 33445678899999999986 9999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|| +.+++|.+++.... .+++.++..++.|++.||+||| +.||+||||||+||+++ ++.+||+|||+++...
T Consensus 88 ~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EC-CCSEEHHHHHHHSC----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred Ee-CCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 99 56789999998754 5888999999999999999999 88999999999999997 5789999999998764
Q ss_pred ccccc-ccccccccccccCCCcCCC-----------CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHH
Q 002155 834 ACETH-VSTDIAGTFGYIPPEYGQS-----------GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 834 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
..... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ......
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~~ 232 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------ISKLHA 232 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH------HHHHHH
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH------HHHHHH
Confidence 33222 2234579999999998754 67889999999999999999999999643221 111222
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+....... .+ ......+.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~~~~--~~-------~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 233 IIDPNHEIE--FP-------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHCTTSCCC--CC-------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhcCCcccC--Cc-------ccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 221111110 01 1112357789999999999999999999875
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-37 Score=354.78 Aligned_cols=344 Identities=27% Similarity=0.389 Sum_probs=188.7
Q ss_pred ccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccC
Q 002155 139 LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNS 218 (959)
Q Consensus 139 L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 218 (959)
++.|++++|.+.. +| .+..+++|++|++++|.+++..+ +.++++|++|++++|.+++..+ +.++++|++|++++
T Consensus 48 l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~ 121 (466)
T 1o6v_A 48 VTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFN 121 (466)
T ss_dssp CCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred ccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCC
Confidence 4555555555543 22 24445555555555555543222 4555555555555555543222 45555555555555
Q ss_pred CcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccce
Q 002155 219 NLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVF 298 (959)
Q Consensus 219 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l 298 (959)
|.+++..+ +..+++|++|++++|++++. + .+..+++|+.|+++ |
T Consensus 122 n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~------------------------------- 165 (466)
T 1o6v_A 122 NQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-N------------------------------- 165 (466)
T ss_dssp SCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-E-------------------------------
T ss_pred CCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-C-------------------------------
Confidence 55543221 44455555555555554432 1 24455555555543 2
Q ss_pred ecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccC
Q 002155 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLT 378 (959)
Q Consensus 299 ~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 378 (959)
.+.+. ..+..+++|+.|++++|.+++. ..+..+++|++|++++|.+.+..+ +..+++|+.|++++|+++
T Consensus 166 -----~~~~~--~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 234 (466)
T 1o6v_A 166 -----QVTDL--KPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 234 (466)
T ss_dssp -----SCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred -----cccCc--hhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcc
Confidence 22211 1245555555555555555533 235566666666666666654433 455566666666666665
Q ss_pred CccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCcccccc
Q 002155 379 GSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFS 458 (959)
Q Consensus 379 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 458 (959)
+. ..+..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|+++++++ +.
T Consensus 235 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~ 306 (466)
T 1o6v_A 235 DI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--IS 306 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GG
T ss_pred cc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hc
Confidence 32 245566666666666666664433 5566666666666666664322 5566666666666666665543 22
Q ss_pred chhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCcc
Q 002155 459 NSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLL 538 (959)
Q Consensus 459 ~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 538 (959)
.. .+|+.|++++|.+++..| +..+++|+.|++++|++++. ..+..+++|++|++++|++++..| +..+++|+
T Consensus 307 ~l--~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~ 378 (466)
T 1o6v_A 307 NL--KNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRIT 378 (466)
T ss_dssp GC--TTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCC
T ss_pred CC--CCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCC
Confidence 22 245555555555554444 55677777777777777643 456777777777777777776555 67777777
Q ss_pred EEecccCcCcccC
Q 002155 539 YLSLAENRLEGMV 551 (959)
Q Consensus 539 ~L~l~~N~l~~~~ 551 (959)
.|++++|++++.+
T Consensus 379 ~L~l~~n~~~~~p 391 (466)
T 1o6v_A 379 QLGLNDQAWTNAP 391 (466)
T ss_dssp EEECCCEEEECCC
T ss_pred EEeccCCcccCCc
Confidence 7777777777654
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-39 Score=356.18 Aligned_cols=266 Identities=18% Similarity=0.193 Sum_probs=199.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEccccchh-----------hHHHHHHHHHHHhcCCCCceecccc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQAKTQ-----------GHREFTAEMETLGKVKHQNLVPLLG 742 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~~~~ 742 (959)
.++|++.+.||+|+||.||+|++. ++..||||+....... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 467899999999999999999975 5778999998654321 1233567888999999999999999
Q ss_pred ceec----CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC
Q 002155 743 YCSF----DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE 818 (959)
Q Consensus 743 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 818 (959)
++.. +...++||||+ +++|.+++.... .+++.+++.++.|++.||+||| +.||+||||||+||+++.+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccC
Confidence 9877 67889999999 999999997654 6899999999999999999999 7899999999999999887
Q ss_pred C--cEEEccccccccccccccc------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc
Q 002155 819 F--EAKVADFGLARLISACETH------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI 890 (959)
Q Consensus 819 ~--~~kl~Dfg~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~ 890 (959)
+ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....+.
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 267 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP 267 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc
Confidence 7 9999999999876432211 1134578999999999998899999999999999999999999995422111
Q ss_pred cCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 891 EGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
............... ....... ........+.+++.+||+.||++||+++++++.|+++..
T Consensus 268 ---~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 268 ---VAVQTAKTNLLDELP-QSVLKWA---PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp ---HHHHHHHHHHHHTTT-HHHHHHS---CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred ---HHHHHHHHhhccccc-HHHHhhc---cccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 111111111111100 0000000 001233468889999999999999999999999998653
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-39 Score=352.08 Aligned_cols=256 Identities=25% Similarity=0.428 Sum_probs=198.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCE----EEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKT----VAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
.++|++.++||+|+||.||+|++. +++. ||+|.+... .....+.+.+|+.+++.++||||+++++++..+ ..+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-Cce
Confidence 367889999999999999999864 4443 577776543 334567789999999999999999999999765 488
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||+.+|+|.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~v~~~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEECCCSSCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred EEEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 9999999999999998754 35889999999999999999999 88999999999999999999999999999987
Q ss_pred ccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 832 ISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 832 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
....... ......+|+.|+|||.+.+..++.++||||+||++|||++ |..||...... .+ ...+......
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~----~~~~~~~~~~ 238 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EI----SSILEKGERL 238 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GH----HHHHHTTCCC
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH----HH----HHHHHcCCCC
Confidence 6432221 1223456789999999998999999999999999999999 99998653222 11 2222222111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. ........+.+++.+||+.||++||+++|+++.|+++.
T Consensus 239 -----~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 277 (327)
T 3lzb_A 239 -----P----QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp -----C----CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----C----CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 0 11123346788999999999999999999999999875
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-39 Score=356.14 Aligned_cols=255 Identities=25% Similarity=0.338 Sum_probs=203.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc----CCCCEEEEEEccccc----hhhHHHHHHHHHHHhcC-CCCceeccccceecCC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL----PDGKTVAVKKLSQAK----TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDE 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 748 (959)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+++++.+ +||||+++++++..++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36799999999999999999987 368999999986532 22344567899999999 6999999999999999
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..++||||+++|+|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE----RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred eEEEEeecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 9999999999999999998754 5889999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCC--CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQS--GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
++..............||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .... +.......
T Consensus 206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~---~~~~-~~~~~~~~ 281 (355)
T 1vzo_A 206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN---SQAE-ISRRILKS 281 (355)
T ss_dssp EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC---CHHH-HHHHHHHC
T ss_pred CeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc---hHHH-HHHHHhcc
Confidence 98765433444445679999999999875 347899999999999999999999996533221 1111 22222111
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHH
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKFL 953 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~L 953 (959)
. +. .+......+.+++.+||+.||++|| +++|++++.
T Consensus 282 ~------~~----~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 282 E------PP----YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp C------CC----CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred C------CC----CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 0 11 1122334677899999999999999 999998754
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=378.59 Aligned_cols=256 Identities=30% Similarity=0.466 Sum_probs=209.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.+.||+|+||.||+|++.++..||||+++... ...++|.+|++++++++||||+++++++.. +..++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 45688889999999999999999888889999987543 235678999999999999999999999876 6789999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++|+|.++++.... ..+++.+++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 344 ~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 418 (535)
T 2h8h_A 344 SKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418 (535)
T ss_dssp TTEEHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred cCCcHHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence 99999999976431 24788999999999999999999 88999999999999999999999999999987643222
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......++..|+|||++.+..++.++|||||||++|||++ |+.||..... ..+...+..+... .
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--------~~~~~~i~~~~~~-----~- 484 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQVERGYRM-----P- 484 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--------HHHHHHHHTTCCC-----C-
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCC-----C-
Confidence 22233456789999999888899999999999999999999 8999864321 1223333332111 1
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
....+...+.++|.+||+.||++|||+++|++.|+++.
T Consensus 485 ---~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 485 ---CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred ---CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 11123446888999999999999999999999999874
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=347.87 Aligned_cols=261 Identities=24% Similarity=0.375 Sum_probs=197.7
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCC--
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE-- 748 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-- 748 (959)
..++|++.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+.++++++||||+++++++...+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 4567888999999999999999754 3458999998754 3344567889999999999999999999987654
Q ss_pred ---ceEEEEEeccCCCHHHHHhhhc--CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEE
Q 002155 749 ---EKLLVYEYMVNGSLDLWLRNRT--GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 749 ---~~~lv~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 823 (959)
..++||||+++|+|.+++.... .....+++..++.++.|+++||+||| +.||+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEE
Confidence 3499999999999999986432 22346899999999999999999999 899999999999999999999999
Q ss_pred cccccccccccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHH
Q 002155 824 ADFGLARLISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
+|||+++......... .....+++.|+|||.+.+..++.++||||||+++|||++ |..||...... ... .
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~----~ 260 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH----EMY----D 260 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHH----H
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH----HHH----H
Confidence 9999997664322211 223456889999999998899999999999999999999 88888643221 111 1
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+..... +.. .......+.+++.+||+.||++||++++++++|+++.
T Consensus 261 ~~~~~~~-----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 261 YLLHGHR-----LKQ----PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp HHHTTCC-----CCC----BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHcCCC-----CCC----CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 2222111 111 1123346888999999999999999999999999875
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=346.85 Aligned_cols=261 Identities=23% Similarity=0.298 Sum_probs=198.8
Q ss_pred cCCCCC-CeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKT-NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 755 (959)
+.|++. ++||+|+||.||+|+.. +++.||||++..........+.+|++++.++ +||||+++++++..++..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 467774 78999999999999865 6899999999766555567788999999885 79999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc---EEEccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE---AKVADFGLARLI 832 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~~~~~ 832 (959)
|+++|+|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++. +||+|||++...
T Consensus 92 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR----HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp CCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred cCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 999999999998754 5889999999999999999999 789999999999999988766 999999998765
Q ss_pred ccccc------cccccccccccccCCCcCCC-----CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCch------
Q 002155 833 SACET------HVSTDIAGTFGYIPPEYGQS-----GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNL------ 895 (959)
Q Consensus 833 ~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~------ 895 (959)
..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||............
T Consensus 165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 244 (316)
T 2ac3_A 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244 (316)
T ss_dssp -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence 32111 11123458999999998764 45789999999999999999999999764332111100
Q ss_pred -HHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 896 -VGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 896 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...+...+...... .+... .......+.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~~~~~i~~~~~~---~~~~~---~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 245 CQNMLFESIQEGKYE---FPDKD---WAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHHCCCC---CCHHH---HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHhccCcc---cCchh---cccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11122222222110 00000 01123467899999999999999999999874
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-38 Score=353.62 Aligned_cols=251 Identities=22% Similarity=0.349 Sum_probs=196.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEcccc--chhhHHHHHHHHHHHhcCC--CCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVK--HQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv 753 (959)
..+|++.+.||+|+||.||+|...+++.||||++... .....+.+.+|+.++++++ ||||+++++++..++..++|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 3568899999999999999999888999999998643 3344567899999999996 59999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|| +.+++|.+++.... .+++.+++.++.||+.||+||| +.||+||||||+||+++ ++.+||+|||+++...
T Consensus 135 ~E-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EE-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred Ee-cCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 99 56889999998754 5788899999999999999999 89999999999999995 5799999999998764
Q ss_pred ccccc-ccccccccccccCCCcCCC-----------CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHH
Q 002155 834 ACETH-VSTDIAGTFGYIPPEYGQS-----------GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 834 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+..
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~------~~~~~~ 279 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------ISKLHA 279 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHH
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH------HHHHHH
Confidence 32222 2334579999999998764 36889999999999999999999999643211 111222
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+....... .+ .. ....+.+++.+||+.||++||+++|++++
T Consensus 280 ~~~~~~~~~--~~----~~---~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 280 IIDPNHEIE--FP----DI---PEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHCTTSCCC--CC----CC---SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhCccccCC--CC----cc---chHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 221111100 01 11 12467889999999999999999999865
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=366.53 Aligned_cols=249 Identities=21% Similarity=0.318 Sum_probs=195.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.++||+|+||.||+|+.. +|+.||||++... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999865 6899999998753 223345677899999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT-PHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
|||+++|+|.+++.... .+++..+..++.|++.||+||| + .||+||||||+|||++.++.+||+|||+++..
T Consensus 227 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 99999999999997754 5889999999999999999999 6 89999999999999999999999999999764
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+......
T Consensus 300 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-------~-~~~~i~~~~~~--- 367 (446)
T 4ejn_A 300 IKD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-------K-LFELILMEEIR--- 367 (446)
T ss_dssp CC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------H-HHHHHHHCCCC---
T ss_pred cCC-CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-------H-HHHHHHhCCCC---
Confidence 322 22234567999999999999999999999999999999999999999653211 1 12222211110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
.| ......+.+++.+||+.||++|| +++|++++
T Consensus 368 ~p-------~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 368 FP-------RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp CC-------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CC-------ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 01 11234678899999999999999 99999864
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-38 Score=354.42 Aligned_cols=263 Identities=28% Similarity=0.356 Sum_probs=190.4
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCC-CCceeccccceecCC--ce
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDE--EK 750 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~--~~ 750 (959)
..++|++.+.||+|+||.||+|.+. +|+.||||++... .......+.+|+.+++.+. ||||+++++++..++ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4578999999999999999999865 6899999998643 2344566778999999997 999999999987544 68
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
|+||||++ ++|.++++.. .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++
T Consensus 87 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEecccC-cCHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 99999997 5899999764 4788999999999999999999 8899999999999999999999999999997
Q ss_pred ccccc--------------------cccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCcc
Q 002155 831 LISAC--------------------ETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKD 889 (959)
Q Consensus 831 ~~~~~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~ 889 (959)
..... ........+||+.|+|||++.+ ..++.++||||+||++|||++|++||......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 237 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 65321 1112234579999999998876 67899999999999999999999999653211
Q ss_pred ccCCchHHHHHHHhhcCcccccc--------------------CccccCCC-------------CHHHHHHHHHHHHHcc
Q 002155 890 IEGGNLVGWVFQKMKKGQAADVL--------------------DPTVLTAD-------------SKPMMLKMLRIAGDCL 936 (959)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~-------------~~~~~~~l~~li~~cl 936 (959)
.....+............. .+...... .......+.+++.+||
T Consensus 238 ----~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L 313 (388)
T 3oz6_A 238 ----NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLL 313 (388)
T ss_dssp ----HHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHC
T ss_pred ----HHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhh
Confidence 1111111111100000000 00000000 0012346789999999
Q ss_pred cCCCCCCCCHHHHHHH
Q 002155 937 SDNPAMRPTMLHVLKF 952 (959)
Q Consensus 937 ~~dP~~Rps~~ell~~ 952 (959)
+.||++|||++|++++
T Consensus 314 ~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 314 QFNPNKRISANDALKH 329 (388)
T ss_dssp CSSGGGSCCHHHHTTS
T ss_pred ccCcccCCCHHHHhCC
Confidence 9999999999999876
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-39 Score=353.11 Aligned_cols=258 Identities=30% Similarity=0.480 Sum_probs=204.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCE--EEEEEcccc-chhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKT--VAVKKLSQA-KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 753 (959)
++|++.+.||+|+||.||+|++. ++.. +|+|.+... .....+.+.+|+++++++ +||||+++++++..++..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 67888999999999999999865 4554 489988643 233455688999999999 899999999999999999999
Q ss_pred EEeccCCCHHHHHhhhc------------CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcE
Q 002155 754 YEYMVNGSLDLWLRNRT------------GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEA 821 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 821 (959)
|||+++|+|.+++.... .....+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence 99999999999997653 22346899999999999999999999 8899999999999999999999
Q ss_pred EEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHH
Q 002155 822 KVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 822 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 900 (959)
||+|||+++..... .......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||..... ....
T Consensus 182 kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--------~~~~ 251 (327)
T 1fvr_A 182 KIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------AELY 251 (327)
T ss_dssp EECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHH
T ss_pred EEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH--------HHHH
Confidence 99999999743321 11223356889999999888889999999999999999998 9999864321 1122
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
..+..+.. +. ........+.+++.+||+.||++|||++|++++|+++..
T Consensus 252 ~~~~~~~~-----~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 252 EKLPQGYR-----LE----KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp HHGGGTCC-----CC----CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhhcCCC-----CC----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 23322211 11 111233468899999999999999999999999998753
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=344.99 Aligned_cols=267 Identities=27% Similarity=0.383 Sum_probs=207.9
Q ss_pred HHhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhc--CCCCceeccccceecCC----c
Q 002155 676 EATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGK--VKHQNLVPLLGYCSFDE----E 749 (959)
Q Consensus 676 ~~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~----~ 749 (959)
...++|++.+.||+|+||.||+|++ +++.||||++... ....+.+|.+++.. ++||||+++++++.... .
T Consensus 39 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~ 114 (342)
T 1b6c_B 39 TIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 114 (342)
T ss_dssp HHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred cccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence 3467899999999999999999998 5899999998643 23456778888877 78999999999998765 7
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEeCCCCCCCEEECCCCcEEEc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF-----TPHIIHRDIKASNILLNEEFEAKVA 824 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~ 824 (959)
.++||||+++|+|.+++... .+++.+++.++.|++.|++|||... +.+|+||||||+||+++.++.+||+
T Consensus 115 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 189 (342)
T 1b6c_B 115 LWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 189 (342)
T ss_dssp EEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEEC
T ss_pred eEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEE
Confidence 89999999999999999764 3889999999999999999999311 3689999999999999999999999
Q ss_pred cccccccccccccc---ccccccccccccCCCcCCCCC------CCCcCcchhHHHHHHHHHhC----------CCCCCC
Q 002155 825 DFGLARLISACETH---VSTDIAGTFGYIPPEYGQSGR------STTRGDVYSFGVILLELVTG----------KEPTGP 885 (959)
Q Consensus 825 Dfg~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwslG~il~elltg----------~~p~~~ 885 (959)
|||++......... ......||+.|+|||++.+.. ++.++|||||||++|||++| ..||..
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~ 269 (342)
T 1b6c_B 190 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 269 (342)
T ss_dssp CCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred ECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccc
Confidence 99999776543222 223457899999999887652 33689999999999999999 667754
Q ss_pred CCccccCCchHHHHHHHhhcCccccccCccccC-CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 886 EFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT-ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
..... ... ..+...+.... ..+.... ....+....+.+++.+||+.||++|||++|++++|+++..
T Consensus 270 ~~~~~--~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~ 336 (342)
T 1b6c_B 270 LVPSD--PSV-EEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336 (342)
T ss_dssp TSCSS--CCH-HHHHHHHTTSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCcCc--ccH-HHHHHHHHHHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 32221 111 11222222111 1111111 1134567789999999999999999999999999999864
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=343.02 Aligned_cols=251 Identities=24% Similarity=0.352 Sum_probs=202.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|+.. +|+.||+|++........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 467889999999999999999875 6899999999765544456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE---CCCCcEEEcccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLIS 833 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~~ 833 (959)
+++++|.+++.... .+++..++.++.|++.|++||| +.|++||||||+||++ +.++.+||+|||.+....
T Consensus 88 ~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 88 VSGGELFDRILERG----VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp CCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred CCCccHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 99999999997654 5789999999999999999999 8899999999999999 778999999999987543
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
. .......|++.|+|||++.+..++.++||||+|+++|||++|..||...... .....+..+... ..
T Consensus 161 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~~~--~~ 227 (304)
T 2jam_A 161 N---GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--------KLFEKIKEGYYE--FE 227 (304)
T ss_dssp C---BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHCCCC--CC
T ss_pred C---CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCCCC--CC
Confidence 2 1223346899999999999999999999999999999999999998653211 122222222111 01
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. .........+.+++.+||+.||++||+++|++++
T Consensus 228 ~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 228 S----PFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp T----TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred c----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1 1112234568889999999999999999999874
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=343.08 Aligned_cols=251 Identities=30% Similarity=0.463 Sum_probs=198.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecC-CceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD-EEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|++. |+.||||++.... ..+.+.+|++++++++||||+++++++... +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 367888999999999999999884 8899999987543 346788999999999999999999986544 578999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|.+++.... ...+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+......
T Consensus 97 ~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~- 170 (278)
T 1byg_A 97 MAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST- 170 (278)
T ss_dssp CTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred CCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc-
Confidence 99999999997653 124788999999999999999999 889999999999999999999999999999765422
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
.....+++.|+|||.+.+..++.++||||+|+++|||++ |..||...... . +...+..+.. +.
T Consensus 171 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~----~----~~~~~~~~~~-----~~ 234 (278)
T 1byg_A 171 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----D----VVPRVEKGYK-----MD 234 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG----G----HHHHHTTTCC-----CC
T ss_pred ---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH----H----HHHHHhcCCC-----CC
Confidence 122357889999999988889999999999999999998 99998643211 1 1222222211 11
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. .......+.+++.+||+.||++||++.|+++.|++++
T Consensus 235 ~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 235 A----PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C----cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 1 1123346888999999999999999999999999985
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=348.96 Aligned_cols=262 Identities=25% Similarity=0.338 Sum_probs=198.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57889999999999999999975 58999999886543 2334567899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|++++++.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 83 ~~~~~~l~~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDRYQR----GVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHhhhc----CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 999999999887543 4889999999999999999999 889999999999999999999999999999876432
Q ss_pred cccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh----------
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK---------- 904 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---------- 904 (959)
.. ......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... +....+.....
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 230 (311)
T 4agu_A 156 SD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV----DQLYLIRKTLGDLIPRHQQVF 230 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCSCCHHHHHHH
T ss_pred cc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhccccccccccc
Confidence 22 2234578999999998765 56899999999999999999999999653221 11111111110
Q ss_pred -cCcc-c--cccCccccCC---CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 905 -KGQA-A--DVLDPTVLTA---DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 905 -~~~~-~--~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.... . ...++..... ........+.+++.+||+.||++|||++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 231 STNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp HTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000 0 0001100000 001234457889999999999999999999864
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=343.29 Aligned_cols=256 Identities=29% Similarity=0.403 Sum_probs=202.2
Q ss_pred CCCCCCeeccCCCeEEEEEEcCC----CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCce-EEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALPD----GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK-LLV 753 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-~lv 753 (959)
.|+..++||+|+||.||+|++.+ +..||+|++.... ....+.+.+|+.+++.++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 45567899999999999998532 2379999987543 34456788999999999999999999999766655 999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+.+|+|.+++.... ..+++.+++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.++...
T Consensus 102 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQ---RNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp ECCCTTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EecccCCCHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 99999999999997643 35788999999999999999999 7899999999999999999999999999997654
Q ss_pred ccc---ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 834 ACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 834 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
... ........+++.|+|||.+.+..++.++||||+|+++|||++|+.|+...... ... ...+.......
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~---~~~----~~~~~~~~~~~ 248 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP---FDL----THFLAQGRRLP 248 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG---GGH----HHHHHTTCCCC
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH---HHH----HHHhhcCCCCC
Confidence 322 11223346788999999999999999999999999999999966665432221 111 12222211100
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
........+.+++.+||+.||++|||++++++.|+++.
T Consensus 249 ---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 286 (298)
T 3pls_A 249 ---------QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV 286 (298)
T ss_dssp ---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 01112346788999999999999999999999999874
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=349.53 Aligned_cols=261 Identities=28% Similarity=0.439 Sum_probs=209.1
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
..++|++.+.||+|+||.||+|++. +++.||||++.... ......+.+|+.+++.++||||+++++++..++.
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 102 (322)
T 1p4o_A 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 102 (322)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCc
Confidence 4567899999999999999999764 36789999987543 3344568899999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcC------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEE
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTG------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 823 (959)
.++||||+++|+|.++++.... ....+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||
T Consensus 103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~kl 179 (322)
T 1p4o_A 103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKI 179 (322)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEE
T ss_pred cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCeEEE
Confidence 9999999999999999976431 1234688999999999999999999 789999999999999999999999
Q ss_pred ccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHH
Q 002155 824 ADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
+|||+++........ ......+|+.|+|||++.+..++.++||||+|+++|||++ |..||..... .....
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~~~ 251 (322)
T 1p4o_A 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLR 251 (322)
T ss_dssp CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH--------HHHHH
T ss_pred CcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH--------HHHHH
Confidence 999999765432221 1223456889999999988889999999999999999999 8888854311 11222
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+....... ........+.+++.+||+.||++|||+.|++++|+++.
T Consensus 252 ~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 252 FVMEGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp HHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred HHHcCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 222221111 11123346788999999999999999999999998863
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=361.81 Aligned_cols=259 Identities=25% Similarity=0.284 Sum_probs=193.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecC------C
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD------E 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~ 748 (959)
.++|++.+.||+|+||.||+|++. +++.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467999999999999999999865 6889999998754 334456788999999999999999999998654 3
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~------~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 56999999976 46666642 3788999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH------
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK------ 902 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~------ 902 (959)
++.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... +....+.+.
T Consensus 211 a~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~----~~~~~i~~~lg~p~~ 284 (464)
T 3ttj_A 211 ARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI----DQWNKVIEQLGTPCP 284 (464)
T ss_dssp C-------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCSCCH
T ss_pred eeecCC--CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHhcCCCCH
Confidence 987643 22334568999999999999999999999999999999999999999653211 011111110
Q ss_pred -------------hhcCcccc------ccCccccCCC---CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 -------------MKKGQAAD------VLDPTVLTAD---SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 -------------~~~~~~~~------~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........ .+.....+.. .......+.+++.+||+.||++|||++|++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 10000000 0000000111 11225578899999999999999999999875
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-38 Score=348.54 Aligned_cols=247 Identities=30% Similarity=0.427 Sum_probs=199.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.+.|+..+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++..++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 35588899999999999999986 478999999986432 23345688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+. |++.+++.... ..+++.+++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 133 ~e~~~-g~l~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp EECCS-EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred EecCC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 99997 58888886544 35889999999999999999999 7899999999999999999999999999997654
Q ss_pred cccccccccccccccccCCCcCC---CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQ---SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
. .....||+.|+|||++. ...++.++|||||||++|||++|+.||.... ............
T Consensus 206 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~-------~~~~~~~~~~~~---- 269 (348)
T 1u5q_A 206 P-----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-------AMSALYHIAQNE---- 269 (348)
T ss_dssp S-----BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-------HHHHHHHHHHSC----
T ss_pred C-----CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHHhcC----
Confidence 2 23457899999999873 5678999999999999999999999985431 112222222111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+.... ......+.+++.+||+.||++|||+++++++
T Consensus 270 --~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 270 --SPALQS---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp --CCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred --CCCCCC---CCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 111111 1123457789999999999999999999865
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=347.50 Aligned_cols=262 Identities=29% Similarity=0.442 Sum_probs=209.1
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEc------CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecCC
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAAL------PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDE 748 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 748 (959)
..++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 104 (316)
T 2xir_A 25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 104 (316)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC
Confidence 457899999999999999999974 356889999987543 33456788999999999 7999999999987654
Q ss_pred -ceEEEEEeccCCCHHHHHhhhcCC------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 002155 749 -EKLLVYEYMVNGSLDLWLRNRTGS------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL 815 (959)
Q Consensus 749 -~~~lv~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 815 (959)
..++||||+++|+|.+++...... ...+++..++.++.|++.|++||| +.||+||||||+||++
T Consensus 105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~ 181 (316)
T 2xir_A 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILL 181 (316)
T ss_dssp SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEE
Confidence 589999999999999999875432 122789999999999999999999 8899999999999999
Q ss_pred CCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCC
Q 002155 816 NEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGG 893 (959)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 893 (959)
+.++.+||+|||.++........ ......+|+.|+|||++.+..++.++||||+|+++|||++ |..||......
T Consensus 182 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---- 257 (316)
T 2xir_A 182 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID---- 257 (316)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS----
T ss_pred CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh----
Confidence 99999999999999866432221 2234467889999999988899999999999999999998 99998653221
Q ss_pred chHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 894 NLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..+...+..+.... . .......+.+++.+||+.||++|||++|++++|+++.
T Consensus 258 ---~~~~~~~~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 258 ---EEFCRRLKEGTRMR-----A----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp ---HHHHHHHHHTCCCC-----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHHHHHhccCccCC-----C----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11222222221111 0 1112346788999999999999999999999999874
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-38 Score=338.85 Aligned_cols=249 Identities=28% Similarity=0.429 Sum_probs=204.0
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceec---------
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF--------- 746 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--------- 746 (959)
..++|++.+.||+|+||.||+|++. +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3467899999999999999999976 78999999987543 246689999999999999999998753
Q ss_pred -------CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC
Q 002155 747 -------DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF 819 (959)
Q Consensus 747 -------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 819 (959)
....++||||+++++|.+++.... ...+++..++.++.|++.|++||| +.||+||||||+||+++.++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETT
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCC
Confidence 345799999999999999997653 235889999999999999999999 78999999999999999999
Q ss_pred cEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHH
Q 002155 820 EAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWV 899 (959)
Q Consensus 820 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 899 (959)
.+||+|||.+....... ......|++.|+|||.+.+..++.++||||+|+++|||++|..|+... ...
T Consensus 160 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~~~ 227 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------SKF 227 (284)
T ss_dssp EEEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------HHH
T ss_pred CEEECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------HHH
Confidence 99999999998765322 223456899999999998889999999999999999999999886321 111
Q ss_pred HHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 900 FQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.......... . .....+.+++.+||+.||++||++.|++++|+.++.
T Consensus 228 ~~~~~~~~~~--------~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 228 FTDLRDGIIS--------D----IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp HHHHHTTCCC--------T----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred HHHhhccccc--------c----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 2222221111 1 122357789999999999999999999999998753
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-39 Score=346.27 Aligned_cols=257 Identities=22% Similarity=0.313 Sum_probs=204.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceecccccee--cCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCS--FDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~l 752 (959)
.++|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|+.++++++||||+++++++. .+...++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467889999999999999999875 6899999998643 2344567889999999999999999999874 4567899
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEeCCCCCCCEEECCCCcEEEcccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH-----IIHRDIKASNILLNEEFEAKVADFG 827 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivH~dlk~~Nill~~~~~~kl~Dfg 827 (959)
||||+++++|.+++.........+++..++.++.|++.|++||| +.+ ++||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999999876544456899999999999999999999 667 9999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 828 LARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
.++...... .......|++.|+|||.+.+..++.++||||+|+++|||++|+.||..... ..+...+..+.
T Consensus 162 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~i~~~~ 232 (279)
T 2w5a_A 162 LARILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--------KELAGKIREGK 232 (279)
T ss_dssp HHHHC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTC
T ss_pred hheeecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--------HHHHHHHhhcc
Confidence 997654321 112234689999999999888899999999999999999999999865321 11222232222
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
... . .......+.+++.+||+.||++||+++|+++++..
T Consensus 233 ~~~-----~----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 233 FRR-----I----PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp CCC-----C----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred ccc-----C----CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 111 1 11233468889999999999999999999987653
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=336.36 Aligned_cols=255 Identities=24% Similarity=0.346 Sum_probs=203.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch------hhHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT------QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+.++++++||||+++++++..++..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 57889999999999999999976 689999999865321 13567899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC----cEEEcccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF----EAKVADFG 827 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg 827 (959)
+||||+++++|.+++.... .+++.+++.++.|++.||+||| +.|++||||||+||+++.++ .+||+|||
T Consensus 85 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE----SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 9999999999999997653 5889999999999999999999 88999999999999998877 89999999
Q ss_pred cccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 828 LARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
.+....... ......|++.|+|||++.+..++.++||||+|+++|||++|..||...... . ....+....
T Consensus 158 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~-~~~~~~~~~ 227 (283)
T 3bhy_A 158 IAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ-------E-TLTNISAVN 227 (283)
T ss_dssp TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------H-HHHHHHTTC
T ss_pred cceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-------H-HHHHhHhcc
Confidence 998664322 223456899999999999889999999999999999999999998653211 1 111121111
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhh
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF--LKEI 956 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~--L~~l 956 (959)
. ...+.... .....+.+++.+||+.||++||++.|++++ ++++
T Consensus 228 ~--~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 228 Y--DFDEEYFS----NTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp C--CCCHHHHT----TCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred c--CCcchhcc----cCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 0 00111111 123457889999999999999999999973 4444
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=347.89 Aligned_cols=263 Identities=22% Similarity=0.290 Sum_probs=193.3
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
..++|++.+.||+|+||.||+|++. +++.||||++..... .....+.+|+.++++++||||+++++++..++..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 3568999999999999999999865 689999999865432 2245577899999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE-----CCCCcEEEccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL-----NEEFEAKVADFGL 828 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill-----~~~~~~kl~Dfg~ 828 (959)
|||+++ +|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||++ +.++.+||+|||+
T Consensus 112 ~e~~~~-~L~~~~~~~~----~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 112 FEYAEN-DLKKYMDKNP----DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EECCSE-EHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EecCCC-CHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 999985 9999998754 4889999999999999999999 8899999999999999 4556699999999
Q ss_pred ccccccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .....+........
T Consensus 184 a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~~~~~~~~~~ 258 (329)
T 3gbz_A 184 ARAFGIPI-RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI----DQLFKIFEVLGLPD 258 (329)
T ss_dssp HHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCCCC
T ss_pred ccccCCcc-cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH----HHHHHHHHHhCCCc
Confidence 98764322 222345689999999988764 4899999999999999999999998653221 11111111111110
Q ss_pred ccccc-----------CccccCCCCH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 AADVL-----------DPTVLTADSK-----PMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~~~~~-----------~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...+. .+........ .....+.+++.+||+.||++|||++|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 259 DTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 00000 0000000001 123567899999999999999999999873
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=338.90 Aligned_cols=253 Identities=24% Similarity=0.339 Sum_probs=203.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467899999999999999999875 68999999986443 3345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++.... .+++..++.++.|++.||+||| +.|++||||||+||+++.++.+||+|||.+......
T Consensus 86 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 86 YCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp CCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred ecCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 999999999886542 5889999999999999999999 889999999999999999999999999999765432
Q ss_pred cc-cccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 836 ET-HVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 836 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.. .......|++.|+|||.+.+..+ +.++||||+|+++|||++|+.||....... .. ......... ...
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~-----~~~~~~~~~--~~~ 229 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QE-----YSDWKEKKT--YLN 229 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS--HH-----HHHHHTTCT--TST
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH--HH-----HHHhhhccc--ccC
Confidence 21 22334578999999999887765 778999999999999999999996533221 01 111111110 000
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........+.+++.+||+.||++|||++|++++
T Consensus 230 ------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 230 ------PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp ------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 011233467889999999999999999999864
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-38 Score=348.87 Aligned_cols=264 Identities=25% Similarity=0.328 Sum_probs=197.4
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh-----hHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ-----GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
..++|++.+.||+|+||.||+|++. +|+.||||++...... ..+.+.+|+++++.++||||+++++++...+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4578999999999999999999976 5899999998643221 124577899999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++ ++.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNS---LVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCC---SSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred EEEEEcCCC-CHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 999999986 8988887643 35778899999999999999999 8899999999999999999999999999998
Q ss_pred ccccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
...... .......||+.|+|||++.+. .++.++||||+||++|||++|.+||...... .....+..........
T Consensus 161 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~----~~~~~i~~~~~~~~~~ 235 (346)
T 1ua2_A 161 SFGSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL----DQLTRIFETLGTPTEE 235 (346)
T ss_dssp TTTSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCCCCTT
T ss_pred eccCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH----HHHHHHHHHcCCCChh
Confidence 764322 223345789999999988654 5789999999999999999999998653211 1111222221111111
Q ss_pred cccCc---------cccCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 910 DVLDP---------TVLTADS-----KPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 910 ~~~~~---------~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+.+. ...+..+ ......+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 11000 0000001 1233568899999999999999999999875
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=352.85 Aligned_cols=199 Identities=26% Similarity=0.324 Sum_probs=174.2
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC-----CCceeccccceecCCce
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-----HQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~~~~~~~~~~~ 750 (959)
..++|++.++||+|+||.||+|++. +++.||||++... ......+..|+.+++.++ ||||+++++++...+..
T Consensus 33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~ 111 (360)
T 3llt_A 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHM 111 (360)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEE
T ss_pred ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCee
Confidence 4578999999999999999999874 6889999998743 233456778999999986 99999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-------------
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE------------- 817 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~------------- 817 (959)
++||||+ +++|.+++..... ..+++.++..++.|++.||+||| +.||+||||||+||+++.
T Consensus 112 ~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~ 185 (360)
T 3llt_A 112 CLIFEPL-GPSLYEIITRNNY--NGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRV 185 (360)
T ss_dssp EEEECCC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEEEEECT
T ss_pred EEEEcCC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccccccchhcc
Confidence 9999999 8999999987542 34889999999999999999999 889999999999999975
Q ss_pred ------------CCcEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCC
Q 002155 818 ------------EFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGP 885 (959)
Q Consensus 818 ------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~ 885 (959)
++.+||+|||+++.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 186 ~~~~~~~~~~~~~~~~kl~DFG~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 186 TDGKKIQIYRTKSTGIKLIDFGCATFKSD----YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp TTCCEEEEEEESCCCEEECCCTTCEETTS----CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccCCCCEEEEeccCceecCC----CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence 78999999999976432 22345789999999999999999999999999999999999999965
Q ss_pred C
Q 002155 886 E 886 (959)
Q Consensus 886 ~ 886 (959)
.
T Consensus 262 ~ 262 (360)
T 3llt_A 262 H 262 (360)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-39 Score=353.07 Aligned_cols=262 Identities=24% Similarity=0.349 Sum_probs=194.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhh-HHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQG-HREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|++.+.||+|+||.||+|++. +++.||||++....... ...+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57889999999999999999976 68999999986543221 12345799999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
++ |+|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDCG---NIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CS-EEHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred cc-cCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 97 49999887654 35889999999999999999999 8899999999999999999999999999997654322
Q ss_pred ccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC--
Q 002155 837 THVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD-- 913 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 913 (959)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... +....+...........+..
T Consensus 155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~ 229 (324)
T 3mtl_A 155 -KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE----EQLHFIFRILGTPTEETWPGIL 229 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCTTTSTTGG
T ss_pred -cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCChHhchhhh
Confidence 22234468999999998776 56899999999999999999999999653221 12222222211111100000
Q ss_pred ----------ccccCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 ----------PTVLTA----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ----------~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+..... ........+.+++.+||+.||++|||++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 230 SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp GCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000000 011223467899999999999999999999873
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=344.10 Aligned_cols=255 Identities=25% Similarity=0.356 Sum_probs=203.4
Q ss_pred hcCCCCCC-eeccCCCeEEEEEEc---CCCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 678 TNNFCKTN-IIGDGGFGTVYKAAL---PDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 678 ~~~f~~~~-~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
.++|++.+ .||+|+||.||+|.+ .+++.||||++.... ....+.+.+|+++++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35677777 999999999999954 246889999987543 23356788999999999999999999998 567789
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||+++++|.+++.... .+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||++..
T Consensus 94 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEeCCCCCHHHHHHhCc----CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 9999999999999998743 4889999999999999999999 88999999999999999999999999999987
Q ss_pred ccccccccc--ccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 832 ISACETHVS--TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 832 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
......... ....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...... .+...+.....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~ 238 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------EVTAMLEKGER 238 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCC
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCC
Confidence 644322211 22346789999999888888999999999999999999 99998653211 12222222211
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. .. +......+.+++.+||+.||++||++.++++.|+++.
T Consensus 239 ~-----~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 239 M-----GC----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp C-----CC----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred C-----CC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 11 1123346888999999999999999999999999874
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-39 Score=353.80 Aligned_cols=261 Identities=28% Similarity=0.444 Sum_probs=208.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC------CCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD------GKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 749 (959)
.++|++.+.||+|+||.||+|++.. +..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++..++.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 4678889999999999999998642 2479999987543 33456788999999999 89999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcC----------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTG----------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF 819 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 819 (959)
.++||||+++|+|.+++..... ....+++..++.++.|++.||+||| +.||+||||||+||+++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCCC
Confidence 9999999999999999976431 1235789999999999999999999 78999999999999999999
Q ss_pred cEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHH
Q 002155 820 EAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVG 897 (959)
Q Consensus 820 ~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~ 897 (959)
.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |..||...... .
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-------~ 274 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-------S 274 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS-------H
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh-------H
Confidence 9999999999865433222 2233457889999999888889999999999999999999 88998653221 1
Q ss_pred HHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 898 WVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+.......... ..+ ......+.+++.+||+.||++|||++|+++.|+++.
T Consensus 275 ~~~~~~~~~~~~--~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 275 KFYKLVKDGYQM--AQP-------AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp HHHHHHHHTCCC--CCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCC--CCC-------CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 112222221110 011 112346788999999999999999999999999875
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-38 Score=349.61 Aligned_cols=256 Identities=26% Similarity=0.392 Sum_probs=202.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 367889999999999999999876 6899999998754 33445678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP-HIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
|+++++|.+++.... .+++..+..++.|++.|++||| +. ||+||||||+||+++.++.+||+|||++.....
T Consensus 112 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp CCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred CCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 999999999998754 4888999999999999999999 54 899999999999999999999999999976532
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccC----------------------
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG---------------------- 892 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~---------------------- 892 (959)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||.........
T Consensus 185 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 185 S---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp H---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred c---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence 1 223457899999999999999999999999999999999999999653221000
Q ss_pred -------------CchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 893 -------------GNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 893 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...... ...+.... .+. .........+.+++.+||+.||++|||++|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFEL-LDYIVNEP-----PPK---LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ------------CCCHHHH-HHHHHHSC-----CCC---CCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CcccccccCCCCcccchhh-hhHHhccC-----CCC---CCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 000000 00000000 000 0011133468899999999999999999999874
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-38 Score=358.13 Aligned_cols=253 Identities=25% Similarity=0.330 Sum_probs=191.8
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--------hhHHHHHHHHHHHhcCCCCceeccccceecC
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--------QGHREFTAEMETLGKVKHQNLVPLLGYCSFD 747 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 747 (959)
..++|.+.+.||+|+||.||+|.+. +++.||||++..... .....+.+|+.++++++||||+++++++. .
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~ 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence 4678999999999999999999865 689999999864321 11224788999999999999999999975 4
Q ss_pred CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC---cEEEc
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF---EAKVA 824 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~ 824 (959)
+..++||||+++|+|.+++.... .+++.+++.++.|++.||+||| +.||+||||||+||+++.++ .+||+
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSC----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred CceEEEEEcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEe
Confidence 56899999999999999886543 5899999999999999999999 78999999999999997544 59999
Q ss_pred ccccccccccccccccccccccccccCCCcCCC---CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHH
Q 002155 825 DFGLARLISACETHVSTDIAGTFGYIPPEYGQS---GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 825 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
|||+++.... ........||+.|+|||++.+ ..++.++||||+||++|||++|..||...... ..+ ..
T Consensus 285 DFG~a~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~---~~~----~~ 355 (419)
T 3i6u_A 285 DFGHSKILGE--TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ---VSL----KD 355 (419)
T ss_dssp CSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS---CCH----HH
T ss_pred ecccceecCC--CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch---HHH----HH
Confidence 9999987643 222344679999999998753 56788999999999999999999999653222 111 12
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+..+.... .+... ......+.+++.+||+.||++||+++|++++
T Consensus 356 ~i~~~~~~~--~~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 356 QITSGKYNF--IPEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHHTTCCCC--CHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhcCCCCC--Cchhh----cccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 222221110 01111 1123467889999999999999999999874
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=376.52 Aligned_cols=248 Identities=23% Similarity=0.389 Sum_probs=198.7
Q ss_pred eeccCCCeEEEEEEcC---CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCC
Q 002155 686 IIGDGGFGTVYKAALP---DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGS 761 (959)
Q Consensus 686 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 761 (959)
.||+|+||.||+|.++ ++..||||+++... ....+++.+|++++++++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999764 46679999997643 3456789999999999999999999999875 56999999999999
Q ss_pred HHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccc-
Q 002155 762 LDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS- 840 (959)
Q Consensus 762 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~- 840 (959)
|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++..........
T Consensus 422 L~~~l~~~~---~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 422 LHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp HHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred HHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 999997543 35899999999999999999999 88999999999999999999999999999987643222211
Q ss_pred -ccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccC
Q 002155 841 -TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918 (959)
Q Consensus 841 -~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (959)
....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... + +...+..+....
T Consensus 496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~----~----~~~~i~~~~~~~-------- 559 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP----E----VMAFIEQGKRME-------- 559 (613)
T ss_dssp ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH----H----HHHHHHTTCCCC--------
T ss_pred ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH----H----HHHHHHcCCCCC--------
Confidence 12245689999999988899999999999999999998 99998653221 1 223333322111
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 919 ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+..+...+.+++.+||+.||++||++.++++.|+++.
T Consensus 560 -~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 560 -CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp -CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 11223457889999999999999999999999999874
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=336.98 Aligned_cols=249 Identities=24% Similarity=0.377 Sum_probs=204.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467889999999999999999976 57899999986542 33456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.... .+++.+++.++.|+++|++||| +.|++||||||+||+++.++.+||+|||.+....
T Consensus 94 ~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 99999999999987654 5889999999999999999999 8899999999999999999999999999998654
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
... .......||+.|+|||.+.+..++.++||||+|+++|||++|+.||...... . ....+..... ..
T Consensus 167 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~-~~~~~~~~~~---~~ 234 (294)
T 2rku_A 167 YDG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-------E-TYLRIKKNEY---SI 234 (294)
T ss_dssp STT-CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------H-HHHHHHTTCC---CC
T ss_pred cCc-cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------H-HHHHHhhccC---CC
Confidence 322 2223456899999999999888999999999999999999999998653211 1 1112221111 00
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+ ......+.+++.+||+.||++|||++|++++
T Consensus 235 ~-------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 235 P-------KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp C-------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred c-------cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1 1123467789999999999999999999874
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=334.20 Aligned_cols=248 Identities=27% Similarity=0.395 Sum_probs=197.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceec----CCceE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSF----DEEKL 751 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~ 751 (959)
..|++.+.||+|+||.||+|.+. ++..||+|++... .....+.+.+|+.++++++||||+++++++.. +...+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34677889999999999999875 6789999998643 34445678899999999999999999998754 35579
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEEC-CCCcEEEccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH--IIHRDIKASNILLN-EEFEAKVADFGL 828 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~-~~~~~kl~Dfg~ 828 (959)
+||||+++++|.+++.... .+++..++.++.|++.|++||| +.+ |+||||||+||+++ .++.+||+|||+
T Consensus 106 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEecCCCCHHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 9999999999999998754 5788999999999999999999 777 99999999999997 789999999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
+..... .......||+.|+|||++. +.++.++||||+|+++|+|++|+.||...... ......+.....
T Consensus 179 ~~~~~~---~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~ 247 (290)
T 1t4h_A 179 ATLKRA---SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA-------AQIYRRVTSGVK 247 (290)
T ss_dssp GGGCCT---TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-------HHHHHHHTTTCC
T ss_pred cccccc---cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-------HHHHHHHhccCC
Confidence 975432 2223456899999999876 45899999999999999999999998643221 112222222211
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... ... .....+.+++.+||+.||++|||++|++++
T Consensus 248 ~~~-----~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 248 PAS-----FDK---VAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp CGG-----GGG---CCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccc-----cCC---CCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 111 111 112357889999999999999999999874
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=351.86 Aligned_cols=262 Identities=17% Similarity=0.228 Sum_probs=201.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC---------CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceec---------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD---------GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVP--------- 739 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~--------- 739 (959)
.++|++.+.||+|+||.||+|++.. ++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 4678999999999999999998763 789999998643 35778999999999999998
Q ss_pred ------cccceec-CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCC
Q 002155 740 ------LLGYCSF-DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASN 812 (959)
Q Consensus 740 ------~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~N 812 (959)
+++++.. +...++||||+ +++|.+++.... ...+++.+++.++.|++.||+||| +.||+||||||+|
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~N 189 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAEN 189 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGG
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHH
Confidence 4455544 67789999999 999999998652 235899999999999999999999 7899999999999
Q ss_pred EEECCCC--cEEEccccccccccccccc------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCC
Q 002155 813 ILLNEEF--EAKVADFGLARLISACETH------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTG 884 (959)
Q Consensus 813 ill~~~~--~~kl~Dfg~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~ 884 (959)
|+++.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 9999999999876532221 1133478999999999999899999999999999999999999986
Q ss_pred CCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 885 PEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
...... ..+.. ......... .....+.. ........+.+++.+||+.||++||+++++++.|+++.
T Consensus 270 ~~~~~~--~~~~~-~~~~~~~~~-~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 270 NCLPNT--EDIMK-QKQKFVDKP-GPFVGPCG---HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp GGTTCH--HHHHH-HHHHHHHSC-CCEECTTS---CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred cCCcCH--HHHHH-HHHhccCCh-hhhhhhcc---ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 532111 11111 111111111 11111000 00112346888999999999999999999999999874
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-38 Score=341.07 Aligned_cols=254 Identities=24% Similarity=0.380 Sum_probs=199.9
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
..++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3467889999999999999999976 588999999877666667789999999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++.... ..+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (302)
T 2j7t_A 97 FCPGGAVDAIMLELD---RGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170 (302)
T ss_dssp CCTTEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred eCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence 999999999987644 34889999999999999999999 789999999999999999999999999997643211
Q ss_pred cccccccccccccccCCCcC-----CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 836 ETHVSTDIAGTFGYIPPEYG-----QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
........|++.|+|||++ .+..++.++||||+|+++|||++|..||..... ...... ........
T Consensus 171 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~-~~~~~~~~ 241 (302)
T 2j7t_A 171 -LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-------MRVLLK-IAKSDPPT 241 (302)
T ss_dssp -HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHH-HHHSCCCC
T ss_pred -ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH-------HHHHHH-HhccCCcc
Confidence 1112334689999999987 467789999999999999999999999864321 111111 11111111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ........+.+++.+||+.||++|||+++++++
T Consensus 242 ~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 242 LL-------TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp CS-------SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred cC-------CccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11 112233468889999999999999999999863
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=346.60 Aligned_cols=252 Identities=16% Similarity=0.137 Sum_probs=201.0
Q ss_pred HhcCCCCCCeeccCCCeEEEEEE------cCCCCEEEEEEccccchhhHHHHHHHHHHHhcCC---CCceeccccceecC
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAA------LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK---HQNLVPLLGYCSFD 747 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~ 747 (959)
..++|++.++||+|+||.||+|. ..+++.||||++.... ..++..|+++++.++ |+||+++++++..+
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 35678899999999999999994 3468899999997543 345667777777776 99999999999999
Q ss_pred CceEEEEEeccCCCHHHHHhhhcC-CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---------
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTG-SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE--------- 817 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--------- 817 (959)
+..++||||+++|+|.+++..... ....+++..++.++.|++.||+||| +.||+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999976432 2346899999999999999999999 899999999999999998
Q ss_pred --CCcEEEcccccccccccc-cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCc
Q 002155 818 --EFEAKVADFGLARLISAC-ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGN 894 (959)
Q Consensus 818 --~~~~kl~Dfg~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~ 894 (959)
++.+||+|||+++..... .........||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--- 293 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC--- 293 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE---
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce---
Confidence 899999999999765321 22233456799999999999999999999999999999999999999854221100
Q ss_pred hHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHHhh
Q 002155 895 LVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMR-PTMLHVLKFLKEI 956 (959)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-ps~~ell~~L~~l 956 (959)
........... ...+.+++..|++.+|.+| |+++++.+.|+++
T Consensus 294 ----------------~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 294 ----------------KPEGLFRRLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp ----------------EECSCCTTCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred ----------------eechhccccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 00000011111 2345677888999999998 6788888888775
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=335.37 Aligned_cols=247 Identities=22% Similarity=0.338 Sum_probs=203.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+++++.++||||+++++++..++..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 367889999999999999999875 57889999986532 22346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++|+|.+++.... .+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+....
T Consensus 93 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG----RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp ECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 99999999999998754 4889999999999999999999 8999999999999999999999999999987653
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.. ......|++.|+|||++.+..++.++||||+|+++|||++|..||...... . ....+.....
T Consensus 166 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~-~~~~~~~~~~----- 229 (284)
T 2vgo_A 166 SL---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-------E-THRRIVNVDL----- 229 (284)
T ss_dssp SS---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-------H-HHHHHHTTCC-----
T ss_pred cc---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-------H-HHHHHhcccc-----
Confidence 21 223457899999999999999999999999999999999999998653211 1 1122221111
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. +......+.+++.+||+.||++||+++|++++
T Consensus 230 -~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 230 -KF----PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp -CC----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred -CC----CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 01 11123467889999999999999999999863
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=347.99 Aligned_cols=261 Identities=28% Similarity=0.395 Sum_probs=204.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|++. +++.||||++... ......++.+|+.++++++||||+++++++..++..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 467889999999999999999842 4778999998643 334456788999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCC---ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---CCcEEEc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE---EFEAKVA 824 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~ 824 (959)
++||||+++++|.+++...... ...+++.+++.++.|++.||+||| +.||+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 9999999999999999875422 235889999999999999999999 889999999999999984 4569999
Q ss_pred ccccccccccccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHH
Q 002155 825 DFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 825 Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
|||.+........ .......+++.|+|||.+.+..++.++||||||+++|||++ |..||..... ..+...
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~~~~~~ 257 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--------QEVLEF 257 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHHH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--------HHHHHH
Confidence 9999976543221 11223457889999999888889999999999999999998 8899864321 112222
Q ss_pred hhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
+...... .. ...+...+.+++.+||+.||++||++.+++++|+.+..
T Consensus 258 ~~~~~~~-----~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 258 VTSGGRM-----DP----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp HHTTCCC-----CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhcCCCC-----CC----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 2222111 11 11223467889999999999999999999999998753
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-39 Score=360.37 Aligned_cols=243 Identities=15% Similarity=0.180 Sum_probs=187.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHH---HHHhcCCCCceeccc-------cc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEM---ETLGKVKHQNLVPLL-------GY 743 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~niv~~~-------~~ 743 (959)
.++|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|+ +.+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 467888999999999999999974 6899999998742 334457788999 555566899999998 44
Q ss_pred eecCC-----------------ceEEEEEeccCCCHHHHHhhhcC---CccccCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 002155 744 CSFDE-----------------EKLLVYEYMVNGSLDLWLRNRTG---SLEVLGWDKRYKIACGAARGLAFLHHGFTPHI 803 (959)
Q Consensus 744 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 803 (959)
+..++ ..++||||+ +|+|.+++..... ....+++..++.++.||+.||+||| +.||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 44332 278999999 6799999986431 1123456888899999999999999 8899
Q ss_pred EeCCCCCCCEEECCCCcEEEcccccccccccccccccccccccccccCCCcCCCC-----------CCCCcCcchhHHHH
Q 002155 804 IHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG-----------RSTTRGDVYSFGVI 872 (959)
Q Consensus 804 vH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwslG~i 872 (959)
+||||||+||+++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986432 2234567 999999998877 79999999999999
Q ss_pred HHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 873 LLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 873 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
+|||++|+.||........ ... +... . ......+.+++.+||+.||++||++.|+++
T Consensus 303 l~elltg~~Pf~~~~~~~~----~~~----~~~~----------~----~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGG----SEW----IFRS----------C----KNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------CC----SGG----GGSS----------C----CCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCcccccccc----hhh----hhhh----------c----cCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999999864322110 000 0000 0 112346788999999999999999999986
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=362.14 Aligned_cols=251 Identities=25% Similarity=0.349 Sum_probs=202.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.++||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++......++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 467999999999999999999875 68999999986432 334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC---CCCcEEEcccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN---EEFEAKVADFGLARL 831 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~~~~ 831 (959)
||+++|+|.+++.... .+++..++.++.|++.|++||| +.||+||||||+||+++ .++.+||+|||+++.
T Consensus 101 e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 9999999999987754 5889999999999999999999 88999999999999995 456899999999986
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.... .......||+.|+|||++.+ .++.++||||+||++|+|++|.+||...... .+...+..+.....
T Consensus 174 ~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~~ 242 (486)
T 3mwu_A 174 FQQN--TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--------DILKRVETGKYAFD 242 (486)
T ss_dssp BCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCSC
T ss_pred CCCC--CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCC
Confidence 6432 22344579999999999875 5899999999999999999999999653211 12222222211110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. +........+.+++.+||+.||++|||+.|++++
T Consensus 243 --~----~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 243 --L----PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp --S----GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred --C----cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0112233467899999999999999999999975
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=355.49 Aligned_cols=199 Identities=29% Similarity=0.382 Sum_probs=166.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecC-----Cc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD-----EE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~ 749 (959)
.++|++.++||+|+||.||+|++. +++.||||++... .....+.+.+|+.+++.++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 467999999999999999999875 5889999998653 333456788999999999999999999998765 56
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.|+||||++ |+|.++++... .+++..+..++.||++||+||| +.||+||||||+||+++.++.+||+|||++
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI----FLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999996 59999997643 5899999999999999999999 889999999999999999999999999999
Q ss_pred cccccccc---------------------cccccccccccccCCCcC-CCCCCCCcCcchhHHHHHHHHHhCCCCCC
Q 002155 830 RLISACET---------------------HVSTDIAGTFGYIPPEYG-QSGRSTTRGDVYSFGVILLELVTGKEPTG 884 (959)
Q Consensus 830 ~~~~~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~elltg~~p~~ 884 (959)
+....... ......+||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 87643221 122456799999999975 56679999999999999999998665553
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=362.92 Aligned_cols=251 Identities=24% Similarity=0.337 Sum_probs=199.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.+.||+|+||.||+|+++ ++..||+|++.... ......+.+|+.+++.++||||++++++|......++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999976 68899999987543 334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC---CcEEEcccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE---FEAKVADFGLARL 831 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~~ 831 (959)
||+++|+|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.. +.+||+|||+++.
T Consensus 116 e~~~~g~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM----KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999999999887654 5889999999999999999999 8899999999999999764 5599999999987
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.... .......||+.|+|||++. ..++.++||||+||++|+|++|.+||...... .+...+..+....
T Consensus 189 ~~~~--~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~- 256 (494)
T 3lij_A 189 FENQ--KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--------EILRKVEKGKYTF- 256 (494)
T ss_dssp CBTT--BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCC-
T ss_pred CCCC--ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCC-
Confidence 6532 2234457999999999876 56999999999999999999999999653221 1222332221110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.... .......+.+++.+||+.||++|||++|++++
T Consensus 257 -~~~~----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 257 -DSPE----WKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp -CSGG----GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -Cchh----cccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 1111 11233467889999999999999999999864
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=347.17 Aligned_cols=258 Identities=26% Similarity=0.324 Sum_probs=193.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCC------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE------ 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 748 (959)
.++|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|+++++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 467889999999999999999874 6899999998543 2333566889999999999999999999987653
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..|+||||+ +++|.++++.. .+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE-----KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeec
Confidence 459999999 78999999763 4788999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
++.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...... +....+........
T Consensus 175 a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~l~~i~~~~g~~~ 246 (367)
T 1cm8_A 175 ARQADS----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL----DQLKEIMKVTGTPP 246 (367)
T ss_dssp CEECCS----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCCCC
T ss_pred cccccc----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHhcCCCC
Confidence 986542 2334578999999998776 67899999999999999999999999653211 11111111000000
Q ss_pred c-----------------ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 A-----------------ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~-----------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. .....+.............+.+++.+|+..||++|||++|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 247 AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 0 00000000001111233467889999999999999999999884
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=343.22 Aligned_cols=249 Identities=25% Similarity=0.389 Sum_probs=204.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|.+.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467889999999999999999976 5789999998654 233456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.... .+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 120 ~e~~~~~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 99999999999987654 5889999999999999999999 7899999999999999999999999999998764
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...... . ....+...... .
T Consensus 193 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~-~~~~~~~~~~~---~ 260 (335)
T 2owb_A 193 YDG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-------E-TYLRIKKNEYS---I 260 (335)
T ss_dssp STT-CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------H-HHHHHHHTCCC---C
T ss_pred cCc-ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH-------H-HHHHHhcCCCC---C
Confidence 322 2223457899999999998888999999999999999999999998653211 1 11112211110 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+ ......+.+++.+||+.||++||+++|++++
T Consensus 261 ~-------~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 261 P-------KHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp C-------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred C-------ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 1122457789999999999999999999864
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-38 Score=342.87 Aligned_cols=249 Identities=28% Similarity=0.415 Sum_probs=204.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.+.|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 356888999999999999999864 68999999986543 3445778999999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++... .+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+......
T Consensus 101 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 101 YLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp CCTTEEHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred eCCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 99999999999653 4889999999999999999999 889999999999999999999999999999776432
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
. .......|++.|+|||++.+..++.++||||||+++|||++|..||...... . ....+..... +.
T Consensus 173 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~-~~~~~~~~~~-----~~ 238 (303)
T 3a7i_A 173 Q-IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-------K-VLFLIPKNNP-----PT 238 (303)
T ss_dssp B-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------H-HHHHHHHSCC-----CC
T ss_pred c-cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-------H-HHHHhhcCCC-----CC
Confidence 2 2223457899999999999999999999999999999999999998643211 1 1111111111 11
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... .....+.+++.+||+.||++|||+.|++++
T Consensus 239 ~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 239 LEG----NYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CCS----SCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred Ccc----ccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 111 123457889999999999999999999875
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-38 Score=346.90 Aligned_cols=255 Identities=26% Similarity=0.319 Sum_probs=187.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CCceecccccee--------cC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGYCS--------FD 747 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~--------~~ 747 (959)
..+|++.++||+|+||.||+|++. +++.||||++........+.+.+|+.+++++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 457889999999999999999965 68999999987666666677899999999996 999999999883 33
Q ss_pred CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEECCCCcEEEcc
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH--IIHRDIKASNILLNEEFEAKVAD 825 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~D 825 (959)
...++||||++ |+|.+++..... ...+++.+++.++.|++.||+||| +.| |+||||||+||+++.++.+||+|
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEec
Confidence 45789999996 699998876332 235899999999999999999999 788 99999999999999999999999
Q ss_pred ccccccccccccc-----------ccccccccccccCCCcC---CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCcccc
Q 002155 826 FGLARLISACETH-----------VSTDIAGTFGYIPPEYG---QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIE 891 (959)
Q Consensus 826 fg~~~~~~~~~~~-----------~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~ 891 (959)
||+++........ ......||+.|+|||++ .+..++.++|||||||++|||++|+.||......
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-- 259 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-- 259 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH--
Confidence 9999876432211 11134589999999988 5667889999999999999999999998542111
Q ss_pred CCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 892 GGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
....... . ...+ ......+.+++.+||+.||++||+++|++++|+++.
T Consensus 260 -----~~~~~~~-----~-~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 260 -----RIVNGKY-----S-IPPH-------DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA 307 (337)
T ss_dssp -----------C-----C-CCTT-------CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----HhhcCcc-----c-CCcc-------cccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0000000 0 0000 011124678999999999999999999999999875
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-37 Score=349.51 Aligned_cols=364 Identities=20% Similarity=0.191 Sum_probs=204.3
Q ss_pred CcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccC
Q 002155 52 NQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIP 131 (959)
Q Consensus 52 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p 131 (959)
.......+..++.+++|++|+|++|.+++ +| .+..+++|++|+|++|+++++ + ++.+++|++|++++|.+.+. |
T Consensus 28 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~ 101 (457)
T 3bz5_A 28 FEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D 101 (457)
T ss_dssp TTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C
T ss_pred cCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e
Confidence 33344555678899999999999999985 46 688999999999999999975 2 77888888888888877653 2
Q ss_pred cccCCC-cccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCC
Q 002155 132 EYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSA 210 (959)
Q Consensus 132 ~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 210 (959)
+..+ +|++|++++|+++++ | ++.+++|++|++++|++++. .++.+++
T Consensus 102 --~~~l~~L~~L~L~~N~l~~l-------------------------~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~ 149 (457)
T 3bz5_A 102 --VTPLTKLTYLNCDTNKLTKL-------------------------D--VSQNPLLTYLNCARNTLTEI---DVSHNTQ 149 (457)
T ss_dssp --CTTCTTCCEEECCSSCCSCC-------------------------C--CTTCTTCCEEECTTSCCSCC---CCTTCTT
T ss_pred --cCCCCcCCEEECCCCcCCee-------------------------c--CCCCCcCCEEECCCCcccee---ccccCCc
Confidence 2222 355555555555542 2 44555555555555555542 2555555
Q ss_pred CCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCcc
Q 002155 211 LSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLS 290 (959)
Q Consensus 211 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~ 290 (959)
|++|++++|...+.+ .+..+++|++|++++|+++++ | +..+++|+.|++++|++++.
T Consensus 150 L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~------------------ 206 (457)
T 3bz5_A 150 LTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL------------------ 206 (457)
T ss_dssp CCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC------------------
T ss_pred CCEEECCCCCccccc--ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee------------------
Confidence 555555555332222 245555566666666665543 2 55555556555555555420
Q ss_pred ccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEE
Q 002155 291 FIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGL 370 (959)
Q Consensus 291 ~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 370 (959)
.++.+++|+.|++++|++++ +| +..+++|++|++++|++++.. +..+++|+.|
T Consensus 207 ---------------------~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L 259 (457)
T 3bz5_A 207 ---------------------DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTL 259 (457)
T ss_dssp ---------------------CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEE
T ss_pred ---------------------ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEE
Confidence 02222333333333333333 12 344444555555555554332 2233444444
Q ss_pred EeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeecccccc
Q 002155 371 YLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLS 450 (959)
Q Consensus 371 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 450 (959)
++++| +|+.|++++|.+.+..| ++.+++|+.|++++|...+.+|. ..++|+.|++++|.
T Consensus 260 ~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~~-- 318 (457)
T 3bz5_A 260 HCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQNP-- 318 (457)
T ss_dssp ECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTCT--
T ss_pred eccCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhcc--
Confidence 44443 23334444554443333 33445555555555554444442 22344444444441
Q ss_pred CCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCcc
Q 002155 451 GPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPET 530 (959)
Q Consensus 451 ~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 530 (959)
+++.|++++|++++. .++++++|+.|++++|++++ ++.|..|++++|.++|.
T Consensus 319 -------------~L~~L~L~~N~l~~l---~l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~---- 370 (457)
T 3bz5_A 319 -------------KLVYLYLNNTELTEL---DVSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE---- 370 (457)
T ss_dssp -------------TCCEEECTTCCCSCC---CCTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE----
T ss_pred -------------cCCEEECCCCccccc---ccccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec----
Confidence 345555555555552 26667777777777777764 23455666777777654
Q ss_pred ccCCCCccEEecccCcCcccCCC
Q 002155 531 MCSLSNLLYLSLAENRLEGMVPR 553 (959)
Q Consensus 531 ~~~l~~L~~L~l~~N~l~~~~~~ 553 (959)
..+..|..+++++|+++|.+|.
T Consensus 371 -~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 371 -GQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp -EEEEECCCBCCBTTBEEEECCT
T ss_pred -ceeeecCccccccCcEEEEcCh
Confidence 2445566677777777776664
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=357.90 Aligned_cols=194 Identities=27% Similarity=0.386 Sum_probs=153.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecC-----Cc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD-----EE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~ 749 (959)
.++|++.++||+|+||.||+|++. +++.||||++... .....+.+.+|+.+++.++||||+++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999865 6899999998653 334456788999999999999999999998433 56
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.|+||||+ +++|.++++... .+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||++
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV----YLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecc-ccchhhhcccCC----CCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccc
Confidence 89999998 469999987643 5899999999999999999999 889999999999999999999999999999
Q ss_pred cccccccc--------------------------cccccccccccccCCCcC-CCCCCCCcCcchhHHHHHHHHHhC
Q 002155 830 RLISACET--------------------------HVSTDIAGTFGYIPPEYG-QSGRSTTRGDVYSFGVILLELVTG 879 (959)
Q Consensus 830 ~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~elltg 879 (959)
+....... ......+||+.|+|||++ .+..++.++||||+||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 87642211 122345789999999975 566799999999999999999994
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=343.82 Aligned_cols=256 Identities=23% Similarity=0.349 Sum_probs=203.9
Q ss_pred HHHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--------hhhHHHHHHHHHHHhcC-CCCceeccccc
Q 002155 674 ILEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--------TQGHREFTAEMETLGKV-KHQNLVPLLGY 743 (959)
Q Consensus 674 ~~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 743 (959)
.....++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+.+++++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445578999999999999999999975 79999999886432 11234577899999999 79999999999
Q ss_pred eecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEE
Q 002155 744 CSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 744 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 823 (959)
+......++||||+++++|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEKV----ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEE
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEE
Confidence 999999999999999999999998653 5889999999999999999999 789999999999999999999999
Q ss_pred cccccccccccccccccccccccccccCCCcCC------CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHH
Q 002155 824 ADFGLARLISACETHVSTDIAGTFGYIPPEYGQ------SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVG 897 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~ 897 (959)
+|||++....... ......||+.|+|||++. ...++.++|||||||++|||++|..||......
T Consensus 242 ~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-------- 311 (365)
T 2y7j_A 242 SDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI-------- 311 (365)
T ss_dssp CCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------
T ss_pred EecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH--------
Confidence 9999998765322 233457999999999865 336889999999999999999999998643111
Q ss_pred HHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 898 WVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.....+..+.... ...... .....+.+++.+||+.||++|||++|++++
T Consensus 312 ~~~~~i~~~~~~~--~~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 312 LMLRMIMEGQYQF--SSPEWD----DRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHHHHHHTCCCC--CHHHHS----SSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHhCCCCC--CCcccc----cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1112222111100 000001 123457889999999999999999999874
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=333.64 Aligned_cols=247 Identities=24% Similarity=0.366 Sum_probs=195.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 57888999999999999999976 78999999986532 233567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++++|.+++.... .+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+.....
T Consensus 91 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 91 EYVSGGELFDYICKHG----RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp ECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred eccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 9999999999998754 4788999999999999999999 78999999999999999999999999999976643
Q ss_pred ccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
. .......+++.|+|||.+.+..+ +.++||||+|+++|||++|+.||..... ......+...... .
T Consensus 164 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~---~ 230 (276)
T 2h6d_A 164 G--EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--------PTLFKKIRGGVFY---I 230 (276)
T ss_dssp ---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCC---C
T ss_pred C--cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--------HHHHHHhhcCccc---C
Confidence 2 22234468999999999887765 6899999999999999999999864311 1122222222110 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+ ......+.+++.+||+.||++|||++|++++
T Consensus 231 ~-------~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 P-------EYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp C-------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred c-------hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1 1123457889999999999999999999875
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-38 Score=339.39 Aligned_cols=253 Identities=22% Similarity=0.314 Sum_probs=188.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.++...++.++||||+++++++..++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 467889999999999999999874 78999999987542 222333445666688889999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP-HIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
||+++ ++.+++.........+++..++.++.|++.|++||| +. |++||||||+||+++.++.+||+|||.++...
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99975 888888764333456899999999999999999999 66 99999999999999999999999999997664
Q ss_pred cccccccccccccccccCCCcC----CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 834 ACETHVSTDIAGTFGYIPPEYG----QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
.. .......||+.|+|||.+ .+..++.++||||+|+++|||++|+.||...... .............
T Consensus 162 ~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~- 232 (290)
T 3fme_A 162 DD--VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP------FQQLKQVVEEPSP- 232 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH------HHHHHHHHHSCCC-
T ss_pred cc--ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch------HHHHHHHhccCCC-
Confidence 32 222334689999999985 5667899999999999999999999998642211 1112222222111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
... .......+.+++.+||+.||++|||++|+++
T Consensus 233 -----~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 233 -----QLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -----CCC---TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -----Ccc---cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 000 1123346788999999999999999999987
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=375.35 Aligned_cols=249 Identities=26% Similarity=0.374 Sum_probs=199.3
Q ss_pred CeeccCCCeEEEEEEcC---CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALP---DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
+.||+|+||.||+|.+. .++.||||+++... ....+++.+|++++++++|||||++++++. .+..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 47999999999999653 46789999987543 334577999999999999999999999986 4568999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc-
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH- 838 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~- 838 (959)
|+|.++++... .+++.+++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++........
T Consensus 454 g~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhhCC----CCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999997643 5889999999999999999999 889999999999999999999999999999876533221
Q ss_pred -ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 839 -VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 839 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ..+...+..+.....
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--------~~~~~~i~~~~~~~~----- 593 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--------SEVTAMLEKGERMGC----- 593 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHHTTCCCCC-----
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCC-----
Confidence 1223356789999999998899999999999999999998 9999865322 123333333321111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
+..+...+.+++.+||+.||++||+++++++.|+++..
T Consensus 594 ----p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 594 ----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp ----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ----CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 11233568899999999999999999999999998854
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=354.24 Aligned_cols=252 Identities=12% Similarity=0.082 Sum_probs=178.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHH---HHHhcCCCCceecccc-------ce
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEM---ETLGKVKHQNLVPLLG-------YC 744 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~---~~l~~l~h~niv~~~~-------~~ 744 (959)
.+|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+ ..++. +||||++++. ++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 45888999999999999999965 78999999987643 23345577785 45555 6999887553 33
Q ss_pred ecC-----------------CceEEEEEeccCCCHHHHHhhhcCCccccCHHHH------HHHHHHHHHHHHHHHhcCCC
Q 002155 745 SFD-----------------EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR------YKIACGAARGLAFLHHGFTP 801 (959)
Q Consensus 745 ~~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~~~ 801 (959)
... ...|+||||++ |+|.+++..... .+.+..+ ..++.||+.||+||| +.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~ 213 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLIRLAANLQ---SK 213 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHHHH---HT
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHHHHHHHHH---HC
Confidence 222 23799999998 899999987531 2344455 678899999999999 88
Q ss_pred CeEeCCCCCCCEEECCCCcEEEcccccccccccccccccccccccccccCCCcCCC--CCCCCcCcchhHHHHHHHHHhC
Q 002155 802 HIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQS--GRSTTRGDVYSFGVILLELVTG 879 (959)
Q Consensus 802 ~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg 879 (959)
||+||||||+|||++.++.+||+|||+++...... ....+|+.|+|||++.+ ..++.++||||+||++|||++|
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg 289 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence 99999999999999999999999999998654211 13456799999999987 6789999999999999999999
Q ss_pred CCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 880 KEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 880 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
+.||.......... .........................+.+++.+||+.||++|||+.|+++
T Consensus 290 ~~Pf~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 290 FLPFGLVTPGIKGS---------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp SCSTTBCCTTCTTC---------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCCcCcccccc---------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 99997653331110 0000000000001111111233456888999999999999999999975
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=340.88 Aligned_cols=248 Identities=20% Similarity=0.339 Sum_probs=199.1
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 752 (959)
..++|++.+.||+|+||.||+|++. +++.||+|++... .......+.+|+..+..+ +||||+++++++..++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3467999999999999999999976 7899999998753 233455678899999999 99999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC--------------
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE-------------- 818 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-------------- 818 (959)
||||+++++|.+++.........+++.+++.++.|++.||+||| +.||+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 99999999999999875432345899999999999999999999 8899999999999999844
Q ss_pred -----CcEEEcccccccccccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccC
Q 002155 819 -----FEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG 892 (959)
Q Consensus 819 -----~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~ 892 (959)
..+||+|||.+...... ....||+.|+|||.+.+. .++.++||||+||++|||++|.+|+...
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------ 234 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSP-----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG------ 234 (289)
T ss_dssp ----CCCEEECCCTTCEETTCS-----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS------
T ss_pred ccCCceEEEEcccccccccCCc-----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch------
Confidence 47999999999866432 223589999999988765 5668999999999999999998876431
Q ss_pred CchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 893 GNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ....+..... +.... .....+.+++.+||+.||++|||++|++++
T Consensus 235 -~----~~~~~~~~~~-----~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 235 -D----QWHEIRQGRL-----PRIPQ----VLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp -H----HHHHHHTTCC-----CCCSS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -h----HHHHHHcCCC-----CCCCc----ccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1 1122222211 11111 123467889999999999999999999864
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=349.18 Aligned_cols=263 Identities=26% Similarity=0.373 Sum_probs=198.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+.++++++||||+++++++..++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 467889999999999999999976 58999999885433 233455789999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||++++++.++..... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||.++....
T Consensus 104 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN----GLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp ECCSEEHHHHHHHSTT----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecCCcchHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 9999999988876543 4889999999999999999999 88999999999999999999999999999976543
Q ss_pred ccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHH-----------H
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ-----------K 902 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-----------~ 902 (959)
.. .......||+.|+|||++.+. .++.++||||+||++|||++|+.||....... ....+.. .
T Consensus 177 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~ 251 (331)
T 4aaa_A 177 PG-EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID----QLYHIMMCLGNLIPRHQEL 251 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCSCCHHHHHH
T ss_pred Cc-cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH----HHHHHHHHhCCCChhhhhH
Confidence 22 222345689999999988765 68999999999999999999999996543211 1110100 0
Q ss_pred hhcC-ccccccCccccCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKG-QAADVLDPTVLTADS-----KPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~-~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.... .......+....... ......+.+++.+||+.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 001111111111111 1234578899999999999999999999864
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-37 Score=336.66 Aligned_cols=252 Identities=27% Similarity=0.404 Sum_probs=199.5
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
..++|++.+.||+|+||.||+|++. +|+.||+|.+.... ..+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 3567999999999999999999875 58999999987533 34678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++.... ..+++.+++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+......
T Consensus 105 ~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (314)
T 3com_A 105 YCGAGSVSDIIRLRN---KTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT 178 (314)
T ss_dssp CCTTEEHHHHHHHHT---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred cCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence 999999999997543 35889999999999999999999 889999999999999999999999999999766432
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
. .......|++.|+|||.+.+..++.++||||+|+++|||++|..||..... ..... ...........
T Consensus 179 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~-~~~~~~~~~~~--- 246 (314)
T 3com_A 179 M-AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP-------MRAIF-MIPTNPPPTFR--- 246 (314)
T ss_dssp B-SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHH-HHHHSCCCCCS---
T ss_pred c-cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh-------HHHHH-HHhcCCCcccC---
Confidence 2 222345689999999999988999999999999999999999999864321 11111 11111111110
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........+.+++.+||+.||++|||+.+++++
T Consensus 247 ----~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 247 ----KPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp ----SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ----CcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 111223468889999999999999999999863
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-38 Score=364.21 Aligned_cols=251 Identities=25% Similarity=0.354 Sum_probs=204.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.++||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 457999999999999999999976 78999999986432 34467789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE---CCCCcEEEccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL---NEEFEAKVADFGLAR 830 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~ 830 (959)
|||+.+|+|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||++ +.++.+||+|||+++
T Consensus 105 ~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp ECCCCSCBHHHHHHTCS----CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 99999999999997654 5889999999999999999999 8899999999999999 567899999999998
Q ss_pred ccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
...... ......||+.|+|||++.+ .++.++||||+||++|+|++|.+||...... .+...+..+....
T Consensus 178 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~ 246 (484)
T 3nyv_A 178 HFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY--------DILKKVEKGKYTF 246 (484)
T ss_dssp HBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCC
T ss_pred Eccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCCCCC
Confidence 765322 2234579999999998865 6899999999999999999999999653211 1222232221111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. . +........+.+++.+||+.||++|||++|++++
T Consensus 247 ~--~----~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 247 E--L----PQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp C--S----GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred C--C----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 0 0 0112234567899999999999999999999864
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=343.81 Aligned_cols=264 Identities=24% Similarity=0.362 Sum_probs=185.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 468999999999999999999865 68899999986543 3345668899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhc----CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 756 YMVNGSLDLWLRNRT----GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
|+++++|.+++.... .....+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+..
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 999999999987521 11245899999999999999999999 78999999999999999999999999999976
Q ss_pred cccccc----cccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 832 ISACET----HVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 832 ~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
...... .......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... . .........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~---~~~~~~~~~ 243 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM----K---VLMLTLQND 243 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG----G---HHHHHHTSS
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh----h---HHHHHhccC
Confidence 543211 11233468999999998765 46899999999999999999999998653221 1 111111111
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
....................+.+++.+||+.||++||+++|++++
T Consensus 244 -~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 244 -PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp -CCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred -CCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 000000000001111223467889999999999999999999873
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=354.28 Aligned_cols=261 Identities=19% Similarity=0.244 Sum_probs=203.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCC-ceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQ-NLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.++||+|+||.||+|++ .+++.||||++..... ..++..|+++++.++|+ ++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46899999999999999999986 4689999998764332 23477899999999874 55556666677788899999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE---CCCCcEEEccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLI 832 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~ 832 (959)
|+ +++|.+++.... ..+++.+++.|+.||+.||+||| +.|||||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~-g~sL~~ll~~~~---~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp CC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred CC-CCCHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 99 999999998644 35899999999999999999999 8899999999999999 57899999999999876
Q ss_pred cccccc------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 833 SACETH------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 833 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....+.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~i~~~~~~~ 235 (483)
T 3sv0_A 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-QKYEKISEKKVAT 235 (483)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH-HHHHHHHHHHHHS
T ss_pred cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH-HHHHHHhhccccc
Confidence 543221 122557999999999999999999999999999999999999999754322111 1111111111111
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.... ... .+...+.+++.+||+.||++||++++|++.|+++.
T Consensus 236 ~~~~-----l~~----~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 236 SIEA-----LCR----GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp CHHH-----HHT----TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred cHHH-----Hhc----CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 0000 001 12346889999999999999999999999999874
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=348.39 Aligned_cols=272 Identities=21% Similarity=0.233 Sum_probs=199.4
Q ss_pred ccCHHHHHHHhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccch-----------hhHHHHHHHHHHHhcCCCCc
Q 002155 668 RLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKT-----------QGHREFTAEMETLGKVKHQN 736 (959)
Q Consensus 668 ~~~~~~~~~~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~e~~~l~~l~h~n 736 (959)
+....++....++|++.+.||+|+||.||+|++.+|+.||||++..... ...+.+.+|++++++++|||
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 90 (362)
T 3pg1_A 11 RDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN 90 (362)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence 3445677778899999999999999999999988899999998854321 12367889999999999999
Q ss_pred eeccccceec-----CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCC
Q 002155 737 LVPLLGYCSF-----DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKAS 811 (959)
Q Consensus 737 iv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~ 811 (959)
|+++++++.. ....++||||++ |++.+++.... ..+++..++.++.|++.||+||| +.||+||||||+
T Consensus 91 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 163 (362)
T 3pg1_A 91 ILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR---IVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPG 163 (362)
T ss_dssp BCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGG
T ss_pred ccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChH
Confidence 9999999843 335799999998 58888887543 35899999999999999999999 789999999999
Q ss_pred CEEECCCCcEEEcccccccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc
Q 002155 812 NILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI 890 (959)
Q Consensus 812 Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~ 890 (959)
||+++.++.+||+|||.++..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......
T Consensus 164 NIl~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~- 240 (362)
T 3pg1_A 164 NILLADNNDITICDFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY- 240 (362)
T ss_dssp GEEECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-
T ss_pred HEEEcCCCCEEEEecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-
Confidence 999999999999999999754322 22334578999999998776 67899999999999999999999999653221
Q ss_pred cCCchHHHHHHHhhcCccc---------------ccc---CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 891 EGGNLVGWVFQKMKKGQAA---------------DVL---DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~---------------~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.....+.......... ... ...............+.+++.+||+.||++|||++|++++
T Consensus 241 ---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 241 ---NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp ---HHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ---HHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 1111111111000000 000 0000000011123457899999999999999999999874
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=370.02 Aligned_cols=249 Identities=25% Similarity=0.304 Sum_probs=204.9
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcC-CCCceeccccceecCCceE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 751 (959)
..++|++.++||+|+||.||+|+.+ +++.||||++... .....+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3468999999999999999999975 5889999998753 233455677899999987 7999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||+++|+|.++++... .+++..++.++.||+.||+||| +.||+||||||+|||++.++++||+|||+++.
T Consensus 419 lV~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEeCcCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 9999999999999998764 5899999999999999999999 88999999999999999999999999999986
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.... ........||+.|+|||++.+..++.++|||||||++|||++|..||..... ..+.+.+......
T Consensus 492 ~~~~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--------~~~~~~i~~~~~~-- 560 (674)
T 3pfq_A 492 NIWD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIMEHNVA-- 560 (674)
T ss_dssp CCCT-TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHSSCCC--
T ss_pred cccC-CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhCCCC--
Confidence 4322 2233456899999999999999999999999999999999999999965321 1122333322111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM-----LHVLK 951 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~ell~ 951 (959)
. +......+.+++.+||+.||++||++ +||++
T Consensus 561 -~-------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 561 -Y-------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp -C-------CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred -C-------CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1 11234567889999999999999997 77765
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-37 Score=357.80 Aligned_cols=252 Identities=27% Similarity=0.328 Sum_probs=201.7
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch-------------hhHHHHHHHHHHHhcCCCCceecccc
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT-------------QGHREFTAEMETLGKVKHQNLVPLLG 742 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~~~~ 742 (959)
..++|++.++||+|+||+||+|+.+ +++.||||++..... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3578999999999999999999975 578999999865321 23467889999999999999999999
Q ss_pred ceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC---
Q 002155 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF--- 819 (959)
Q Consensus 743 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~--- 819 (959)
++..+...++||||+++|+|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH----KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCc
Confidence 9999999999999999999999997754 5899999999999999999999 88999999999999998775
Q ss_pred cEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHH
Q 002155 820 EAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWV 899 (959)
Q Consensus 820 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 899 (959)
.+||+|||+++..... .......||+.|+|||++. +.++.++||||+||++|+|++|.+||..... ..+
T Consensus 187 ~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~ 255 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKD--YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND--------QDI 255 (504)
T ss_dssp SEEECCCTTCEECCTT--SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHH
T ss_pred cEEEEECCCCEEcCCC--CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--------HHH
Confidence 6999999999876532 2234457999999999876 4689999999999999999999999965321 112
Q ss_pred HHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 900 FQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...+..+.... ..... ......+.+++.+||+.||.+|||++|++++
T Consensus 256 ~~~i~~~~~~~--~~~~~----~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 256 IKKVEKGKYYF--DFNDW----KNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHHHHCCCCC--CHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHcCCCCC--Ccccc----CCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 23333221110 00000 1123467889999999999999999999864
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=349.54 Aligned_cols=263 Identities=23% Similarity=0.285 Sum_probs=195.7
Q ss_pred HHhcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecC-------
Q 002155 676 EATNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD------- 747 (959)
Q Consensus 676 ~~~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------- 747 (959)
...++|++.+.||+|+||.||+|++ .+|+.||||++...... ..+|+++++.++||||+++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 3567899999999999999999986 47899999998654322 23699999999999999999988432
Q ss_pred -------------------------------CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHH
Q 002155 748 -------------------------------EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796 (959)
Q Consensus 748 -------------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH 796 (959)
...++||||++ |+|.+.+.........+++..+..++.|+++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34789999998 4888887654333456899999999999999999999
Q ss_pred hcCCCCeEeCCCCCCCEEEC-CCCcEEEcccccccccccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHH
Q 002155 797 HGFTPHIIHRDIKASNILLN-EEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILL 874 (959)
Q Consensus 797 ~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ 874 (959)
+.||+||||||+||+++ .++.+||+|||.++...... ......+|+.|+|||++.+. .++.++||||+||++|
T Consensus 159 ---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 233 (383)
T 3eb0_A 159 ---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233 (383)
T ss_dssp ---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred ---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence 89999999999999997 68899999999998764322 23345789999999987765 4899999999999999
Q ss_pred HHHhCCCCCCCCCccccCCchHHHHHHHhhcC----------ccccccCccccCC-----CCHHHHHHHHHHHHHcccCC
Q 002155 875 ELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG----------QAADVLDPTVLTA-----DSKPMMLKMLRIAGDCLSDN 939 (959)
Q Consensus 875 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~d 939 (959)
||++|+.||...... +....+....... .......+..... ........+.+++.+||+.|
T Consensus 234 ell~g~~pf~~~~~~----~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 309 (383)
T 3eb0_A 234 ELILGKPLFSGETSI----DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYE 309 (383)
T ss_dssp HHHHSSCSSCCSSHH----HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred HHHhCCCCCCCCChH----HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCC
Confidence 999999999653221 1111111111000 0000001111111 11123345789999999999
Q ss_pred CCCCCCHHHHHHH
Q 002155 940 PAMRPTMLHVLKF 952 (959)
Q Consensus 940 P~~Rps~~ell~~ 952 (959)
|++|||+.|++++
T Consensus 310 P~~R~t~~e~l~h 322 (383)
T 3eb0_A 310 PDLRINPYEAMAH 322 (383)
T ss_dssp GGGSCCHHHHHTS
T ss_pred hhhCCCHHHHhcC
Confidence 9999999999864
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-38 Score=340.02 Aligned_cols=257 Identities=27% Similarity=0.410 Sum_probs=196.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC--CCC--EEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP--DGK--TVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|++. +++ .||||++... .....+.+.+|++++++++||||+++++++..+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357889999999999999999853 333 6899988653 2344567889999999999999999999987654 8
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++++|.+++.... ..+++.+++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||++.
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG---GGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeeEecccCCCHHHHHHhcc---CCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccc
Confidence 99999999999999998754 35889999999999999999999 8899999999999999999999999999998
Q ss_pred cccccccc--ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 831 LISACETH--VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 831 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
........ ......++..|+|||...+..++.++||||+|+++|||++ |..||..... .. ....+....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~-~~~~~~~~~ 241 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-------SQ-ILHKIDKEG 241 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HH-HHHHHHTSC
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-------HH-HHHHHHccC
Confidence 76433221 1223457789999999888888999999999999999999 9999864321 11 112221111
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. .+. ........+.+++.+||+.||++|||+.++++.|+++.
T Consensus 242 ~----~~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 283 (291)
T 1u46_A 242 E----RLP----RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283 (291)
T ss_dssp C----CCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred C----CCC----CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence 0 011 11223456888999999999999999999999999875
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=342.00 Aligned_cols=257 Identities=18% Similarity=0.251 Sum_probs=198.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CCceeccccceec--CCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGYCSF--DEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--~~~~~lv 753 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++.... .+.+.+|+.++++++ ||||+++++++.. ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 46799999999999999999986 478999999987433 456889999999997 9999999999987 5678999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC-cEEEccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF-EAKVADFGLARLI 832 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~ 832 (959)
|||+++++|.++++. +++.++..++.|++.|++||| +.||+||||||+||+++.++ .+||+|||+++..
T Consensus 112 ~e~~~~~~l~~~~~~-------~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp EECCCCCCHHHHGGG-------CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeccCchhHHHHHHh-------CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence 999999999998853 778899999999999999999 88999999999999999776 8999999999866
Q ss_pred ccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHH---------HH
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF---------QK 902 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~---------~~ 902 (959)
.... ......+++.|+|||++.+ ..++.++||||+||++|||++|+.||........ ....+. ..
T Consensus 182 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~---~l~~~~~~~~~~~~~~~ 256 (330)
T 3nsz_A 182 HPGQ--EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD---QLVRIAKVLGTEDLYDY 256 (330)
T ss_dssp CTTC--CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH---HHHHHHHHHCHHHHHHH
T ss_pred CCCC--ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHH---HHHHHHHhcCCchhhhH
Confidence 4322 2334578999999998776 6789999999999999999999999965432211 000000 00
Q ss_pred hhcCcc--------------ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKGQA--------------ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+..... ...................+.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 257 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000 00000000111112234578899999999999999999999874
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=338.18 Aligned_cols=253 Identities=24% Similarity=0.357 Sum_probs=197.5
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
+|....+||+|+||.||+|++. +++.||||++........+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 3445568999999999999864 688999999876655556778999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-CCcEEEcccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE-EFEAKVADFGLARLISACET 837 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~~~~ 837 (959)
+++|.+++..... ...+++..++.++.|++.|++||| +.|++||||||+||+++. ++.+||+|||.+.......
T Consensus 103 ~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~- 177 (295)
T 2clq_A 103 GGSLSALLRSKWG-PLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN- 177 (295)
T ss_dssp EEEHHHHHHHTTC-CCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCHHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC-
Confidence 9999999987532 234678899999999999999999 789999999999999987 8999999999997654322
Q ss_pred cccccccccccccCCCcCCCCC--CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGR--STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
.......|++.|+|||++.+.. ++.++||||||+++|||++|+.||...... ........... ..+.
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~------~~~~ 246 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP-----QAAMFKVGMFK------VHPE 246 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH-----HHHHHHHHHHC------CCCC
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch-----hHHHHhhcccc------cccc
Confidence 1223457899999999876543 788999999999999999999998532111 01111111110 0111
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. +......+.+++.+||+.||++||+++|++++
T Consensus 247 ~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 247 I----PESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp C----CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred c----cccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1 11233467889999999999999999999863
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-38 Score=343.85 Aligned_cols=255 Identities=24% Similarity=0.312 Sum_probs=200.5
Q ss_pred HhcCCCCC-CeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCC-CCceeccccceecCCceE
Q 002155 677 ATNNFCKT-NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 677 ~~~~f~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 751 (959)
-.++|.+. +.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.+++.++ ||||+++++++..++..+
T Consensus 26 ~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~ 105 (327)
T 3lm5_A 26 FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEII 105 (327)
T ss_dssp HHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEE
Confidence 44567776 88999999999999876 68999999987543 233567889999999995 699999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---CCcEEEccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE---EFEAKVADFGL 828 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~ 828 (959)
+||||+++|+|.+++.... ...+++.+++.++.|++.||+||| +.||+||||||+||+++. ++.+||+|||+
T Consensus 106 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~ 180 (327)
T 3lm5_A 106 LILEYAAGGEIFSLCLPEL--AEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGM 180 (327)
T ss_dssp EEEECCTTEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred EEEEecCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence 9999999999999986532 245899999999999999999999 889999999999999988 78999999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
++..... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... . ....+.....
T Consensus 181 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~-~~~~i~~~~~ 250 (327)
T 3lm5_A 181 SRKIGHA--CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ-------E-TYLNISQVNV 250 (327)
T ss_dssp CEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------H-HHHHHHHTCC
T ss_pred ccccCCc--cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-------H-HHHHHHhccc
Confidence 9876432 2223457899999999999999999999999999999999999998653221 1 1111111111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. .. ..........+.+++.+||+.||++|||++|++++
T Consensus 251 ~--~~----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 251 D--YS----EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp C--CC----TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred c--cC----chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 0 01 11112234467889999999999999999999864
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-36 Score=348.92 Aligned_cols=320 Identities=22% Similarity=0.231 Sum_probs=183.0
Q ss_pred EEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccc
Q 002155 46 SLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNH 125 (959)
Q Consensus 46 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 125 (959)
.++.+++++. .+|..+. +++++|+|++|++++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.
T Consensus 15 ~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 4455555544 4444332 355555555555554445555555555555555555555555555555555555555554
Q ss_pred cccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccc
Q 002155 126 IYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEI 205 (959)
Q Consensus 126 ~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~ 205 (959)
+.+..+. .|.++++|++|++++|.+++..|..|.++++|++|+|++|.+++..+..|
T Consensus 92 l~~~~~~-----------------------~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 148 (477)
T 2id5_A 92 LKLIPLG-----------------------VFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAF 148 (477)
T ss_dssp CCSCCTT-----------------------SSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSS
T ss_pred CCccCcc-----------------------cccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhc
Confidence 4433333 33334444444444444444444455555555555555555555555555
Q ss_pred cCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccC
Q 002155 206 GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQAN 285 (959)
Q Consensus 206 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~ 285 (959)
.++++|++|+|++|.++.+.+..+..+++|+.|+|++|++.+..+..|..+++|+.|++++|.+.+.+|
T Consensus 149 ~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~----------- 217 (477)
T 2id5_A 149 SGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMT----------- 217 (477)
T ss_dssp TTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEEC-----------
T ss_pred cCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccC-----------
Confidence 556666666666666655555555566666666666666655555556666666666666554432111
Q ss_pred CCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCC
Q 002155 286 MPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSI 365 (959)
Q Consensus 286 ~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 365 (959)
.......+|+.|++++|+++...+..|..+++|++|+|++|++++..+..|..++
T Consensus 218 -------------------------~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 272 (477)
T 2id5_A 218 -------------------------PNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELL 272 (477)
T ss_dssp -------------------------TTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCT
T ss_pred -------------------------cccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccc
Confidence 1111222455555555555544445666667777777777777666666667777
Q ss_pred cceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccC
Q 002155 366 KLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDG 427 (959)
Q Consensus 366 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 427 (959)
+|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|++|+|++|++..
T Consensus 273 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 273 RLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp TCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred cCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 77777777777776666677777777777777777776666667777777777777777763
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=342.93 Aligned_cols=264 Identities=25% Similarity=0.294 Sum_probs=198.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceec--------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSF-------- 746 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------- 746 (959)
.++|++.+.||+|+||.||+|++. +|+.||||++.... ......+.+|+.+++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 367899999999999999999974 78999999986433 2234567899999999999999999999876
Q ss_pred CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 747 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
.+..++||||+++ ++.+.+.... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVL---VKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCC
T ss_pred CceEEEEEeccCC-CHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccc
Confidence 3468999999975 7777776543 35899999999999999999999 889999999999999999999999999
Q ss_pred cccccccccc---ccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 827 GLARLISACE---THVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 827 g~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
|+++...... ........||+.|+|||++.+ ..++.++||||+||++|||++|++||...... .....+...
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~i~~~ 244 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ----HQLALISQL 244 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHH
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHH
Confidence 9998764221 122234568999999998765 45799999999999999999999998753221 111111111
Q ss_pred hhcCccccc-----------cCccccC-CCCHHH------HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKGQAADV-----------LDPTVLT-ADSKPM------MLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~~~~~~-----------~~~~~~~-~~~~~~------~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......... ....... ....+. ...+.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 245 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp HCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 111100000 0000000 000111 2347899999999999999999999874
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-37 Score=344.12 Aligned_cols=263 Identities=23% Similarity=0.249 Sum_probs=191.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCC------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE------ 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 748 (959)
.++|++.+.||+|+||.||+|++. +++.||||++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 367889999999999999999865 6889999998653 2334566889999999999999999999987654
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..++||||+++ +|.+++.. .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCCC-CHHHHHhh------ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeec
Confidence 67999999975 78888752 3788999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccC--------Cc------
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG--------GN------ 894 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~--------~~------ 894 (959)
++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||........- ..
T Consensus 174 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 251 (371)
T 2xrw_A 174 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 251 (371)
T ss_dssp ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHT
T ss_pred ccccccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9765422 2233457899999999999999999999999999999999999999653211000 00
Q ss_pred -hHHHHHHHhhcCcccc------ccCccccCCC---CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 895 -LVGWVFQKMKKGQAAD------VLDPTVLTAD---SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 895 -~~~~~~~~~~~~~~~~------~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+...+........... .......+.. .......+.+++.+||+.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000000000000000 0000000111 12335678999999999999999999999875
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=344.80 Aligned_cols=259 Identities=22% Similarity=0.334 Sum_probs=204.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhh-----------------HHHHHHHHHHHhcCCCCceecc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQG-----------------HREFTAEMETLGKVKHQNLVPL 740 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~niv~~ 740 (959)
.++|++.+.||+|+||.||+|++ +++.||||++....... .+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46799999999999999999999 89999999986532211 1778999999999999999999
Q ss_pred ccceecCCceEEEEEeccCCCHHHH------HhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCE
Q 002155 741 LGYCSFDEEKLLVYEYMVNGSLDLW------LRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT-PHIIHRDIKASNI 813 (959)
Q Consensus 741 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlk~~Ni 813 (959)
++++...+..++||||+++|+|.++ +.... ...+++..++.++.|++.|++||| + .|++||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY--TCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS--CCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc--ccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhE
Confidence 9999999999999999999999998 54321 346899999999999999999999 6 8999999999999
Q ss_pred EECCCCcEEEcccccccccccccccccccccccccccCCCcCCCC-CCCC-cCcchhHHHHHHHHHhCCCCCCCCCcccc
Q 002155 814 LLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG-RSTT-RGDVYSFGVILLELVTGKEPTGPEFKDIE 891 (959)
Q Consensus 814 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwslG~il~elltg~~p~~~~~~~~~ 891 (959)
+++.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++||||+|+++|||++|..||......
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-- 258 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-- 258 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--
T ss_pred EEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--
Confidence 9999999999999999875432 23445789999999998877 5665 999999999999999999999754321
Q ss_pred CCchHHHHHHHhhcCccccccC------c---cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 892 GGNLVGWVFQKMKKGQAADVLD------P---TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......+.......... + .............+.+++.+||+.||++||+++|++++
T Consensus 259 -----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 259 -----VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp -----HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred -----HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11222222221111000 0 00000012344578899999999999999999999873
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-37 Score=333.44 Aligned_cols=251 Identities=24% Similarity=0.317 Sum_probs=202.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---------hhhHHHHHHHHHHHhcCC-CCceeccccceec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---------TQGHREFTAEMETLGKVK-HQNLVPLLGYCSF 746 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~ 746 (959)
.++|++.+.||+|+||.||+|+++ +|+.||||++.... ....+.+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467889999999999999999875 68899999986432 122456778999999995 9999999999999
Q ss_pred CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 747 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
++..++||||+++++|.+++.... .+++..++.++.|++.||+||| +.|++||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKV----TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred CCeEEEEEeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecc
Confidence 999999999999999999998753 5889999999999999999999 889999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcCC------CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHH
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQ------SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (959)
|.+....... ......+++.|+|||++. ...++.++||||+|+++|||++|..||..... .. ..
T Consensus 169 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~-~~ 238 (298)
T 1phk_A 169 GFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-------ML-ML 238 (298)
T ss_dssp TTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HH-HH
T ss_pred cchhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH-------HH-HH
Confidence 9998764322 223456899999999864 55688999999999999999999999864321 11 11
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
..+....... ..+........+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 239 RMIMSGNYQF------GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHTCCCC------CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHhcCCccc------CcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 2222211110 01111233456889999999999999999999986
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=344.12 Aligned_cols=262 Identities=24% Similarity=0.318 Sum_probs=199.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecC-----Cce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD-----EEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~ 750 (959)
.++|++.+.||+|+||.||+|++. +++.||||++.... ......+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 467999999999999999999865 68899999987533 33446788999999999999999999998654 468
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++ +|.+++... .+++.++..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.++
T Consensus 106 ~iv~e~~~~-~L~~~l~~~-----~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 106 YIVQDLMET-DLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEEECCSE-EHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEcccCc-CHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 999999974 999998764 3889999999999999999999 8899999999999999999999999999998
Q ss_pred ccccccccc--cccccccccccCCCcCC-CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 831 LISACETHV--STDIAGTFGYIPPEYGQ-SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 831 ~~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
......... .....||+.|+|||++. +..++.++||||+||++|||++|+.||...... +....+........
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~i~~~~~~~~ 252 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL----DQLNHILGILGSPS 252 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG----GHHHHHHHHHCSCC
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH----HHHHHHHHHhCCCC
Confidence 765332221 23457999999999754 445899999999999999999999999654221 11111111111100
Q ss_pred cc---------------cccCcccc--CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 AA---------------DVLDPTVL--TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~~---------------~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ....+... ..........+.+++.+||+.||++|||++|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 00000000 00001123467899999999999999999999874
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=353.36 Aligned_cols=268 Identities=25% Similarity=0.295 Sum_probs=183.1
Q ss_pred cCCCC-CCeeccCCCeEEEEEEcC---CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceecccccee--cCCceEE
Q 002155 679 NNFCK-TNIIGDGGFGTVYKAALP---DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS--FDEEKLL 752 (959)
Q Consensus 679 ~~f~~-~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~l 752 (959)
+.|++ +++||+|+||.||+|+++ +++.||||++..... ...+.+|+.++++++||||+++++++. .+...++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 34665 568999999999999965 578999999975432 346789999999999999999999994 4678899
Q ss_pred EEEeccCCCHHHHHhhhc-----CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE----CCCCcEEE
Q 002155 753 VYEYMVNGSLDLWLRNRT-----GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL----NEEFEAKV 823 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl 823 (959)
||||+++ +|.+++.... .....+++..++.++.|++.||+||| +.||+||||||+||++ +.++.+||
T Consensus 98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 9999975 8888775432 11224889999999999999999999 8899999999999999 67789999
Q ss_pred cccccccccccccc--cccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccC-----Cch
Q 002155 824 ADFGLARLISACET--HVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG-----GNL 895 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~-----~~~ 895 (959)
+|||+++....... .......||+.|+|||++.+. .++.++||||+||++|||++|++||.....+... .+.
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 253 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence 99999987643211 222345789999999988774 5899999999999999999999999754332111 011
Q ss_pred HHHHHHHhhcCccccccC---------------ccccCCCCH---------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 896 VGWVFQKMKKGQAADVLD---------------PTVLTADSK---------PMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~---------~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
...+...+.......+.. ......... .....+.+++.+||+.||++|||++|+++
T Consensus 254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 111111111111000000 000000000 01335788999999999999999999987
Q ss_pred H
Q 002155 952 F 952 (959)
Q Consensus 952 ~ 952 (959)
+
T Consensus 334 h 334 (405)
T 3rgf_A 334 D 334 (405)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=372.55 Aligned_cols=256 Identities=23% Similarity=0.365 Sum_probs=203.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC----CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD----GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.+.||+|+||.||+|++.. +..||||++.... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 4678889999999999999998742 4579999987543 334567889999999999999999999985 467899
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.++++... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 468 v~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp EEECCTTCBHHHHHHHTT---TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred EEEcCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 999999999999998654 34889999999999999999999 789999999999999999999999999999876
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
............+|+.|+|||++.+..++.++|||||||++|||++ |..||...... + +...+..+...
T Consensus 542 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~----~----~~~~i~~~~~~-- 611 (656)
T 2j0j_A 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----D----VIGRIENGERL-- 611 (656)
T ss_dssp CC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----H----HHHHHHHTCCC--
T ss_pred CCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH----H----HHHHHHcCCCC--
Confidence 5433333334457789999999988899999999999999999997 89998643211 1 12222222111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.. +..+...+.+++.+||+.||++||++.|+++.|+++.
T Consensus 612 ---~~----~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 612 ---PM----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp ---CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CC----CccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 11 1123346788999999999999999999999999874
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=350.44 Aligned_cols=261 Identities=25% Similarity=0.275 Sum_probs=192.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCc------eE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE------KL 751 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------~~ 751 (959)
..+|++.++||+|+||.||+|++..+..||+|++...... ..+|+++++.++||||+++++++...+. .+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 3568889999999999999999877777999988643322 2369999999999999999999854332 78
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC-CCCcEEEccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN-EEFEAKVADFGLAR 830 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~~~ 830 (959)
+||||++++.+ +.+.........+++..++.++.|+++||+||| +.||+||||||+||+++ .++.+||+|||+++
T Consensus 115 lv~e~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 115 LVLEYVPETVY-RASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEECCSEEHH-HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeeccCccHH-HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 99999987544 433322222346889999999999999999999 88999999999999998 78999999999998
Q ss_pred ccccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC---
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG--- 906 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 906 (959)
...... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||....... ....+.......
T Consensus 191 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~----~l~~i~~~~g~p~~~ 264 (394)
T 4e7w_A 191 ILIAGE--PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID----QLVEIIKVLGTPSRE 264 (394)
T ss_dssp ECCTTC--CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCCHH
T ss_pred cccCCC--CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCCHH
Confidence 764322 23345789999999987664 58999999999999999999999996532211 111111110000
Q ss_pred -------ccccccCccccCC-----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 -------QAADVLDPTVLTA-----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 -------~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.......+..... ........+.+++.+||+.||++|||+.|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 265 QIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 0000000111110 011133468899999999999999999999875
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=340.24 Aligned_cols=252 Identities=25% Similarity=0.345 Sum_probs=195.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--------hhHHHHHHHHHHHhcCCCCceeccccceecCC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--------QGHREFTAEMETLGKVKHQNLVPLLGYCSFDE 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 748 (959)
.++|++.+.||+|+||.||+|++. +++.||||++..... .....+.+|++++++++||||+++++++..+.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 467999999999999999999875 588999999864321 12335788999999999999999999987654
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc---EEEcc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE---AKVAD 825 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~D 825 (959)
.++||||+++++|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++. +||+|
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -eEEEEecCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 899999999999999987543 5889999999999999999999 889999999999999987654 99999
Q ss_pred cccccccccccccccccccccccccCCCcC---CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 826 FGLARLISACETHVSTDIAGTFGYIPPEYG---QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 826 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
||.++..... .......||+.|+|||++ ....++.++||||+||++|||++|..||...... ..+.. .
T Consensus 161 fg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~----~ 231 (322)
T 2ycf_A 161 FGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ---VSLKD----Q 231 (322)
T ss_dssp CTTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS---SCHHH----H
T ss_pred Cccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH---HHHHH----H
Confidence 9999866422 122334689999999985 3567899999999999999999999999653222 11222 1
Q ss_pred hhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+..+... ..+.... .....+.+++.+||+.||++||+++|++++
T Consensus 232 ~~~~~~~--~~~~~~~----~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 232 ITSGKYN--FIPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp HHHTCCC--CCHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHhCccc--cCchhhh----hcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 2211110 0111111 123467899999999999999999999863
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=350.23 Aligned_cols=260 Identities=25% Similarity=0.289 Sum_probs=193.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecC------CceE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD------EEKL 751 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~ 751 (959)
.+|+..++||+|+||.||+|++. +|+.||||++..... ...+|+++++.++||||++++++|... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46888999999999999999975 589999999865432 234699999999999999999987432 2357
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC-CcEEEccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE-FEAKVADFGLAR 830 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~ 830 (959)
+||||+++ ++.+.+.........+++..++.++.||++||+||| +.||+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 89999986 676666543323346899999999999999999999 8999999999999999965 678999999998
Q ss_pred ccccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhc----
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK---- 905 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---- 905 (959)
...... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... +....+......
T Consensus 206 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~----~~l~~i~~~lg~p~~~ 279 (420)
T 1j1b_A 206 QLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV----DQLVEIIKVLGTPTRE 279 (420)
T ss_dssp ECCTTC--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCSCCHH
T ss_pred hcccCC--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCCHH
Confidence 764322 22345789999999988664 7899999999999999999999999653211 111111111000
Q ss_pred ------CccccccCccccCCC-----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 906 ------GQAADVLDPTVLTAD-----SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 906 ------~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........+...... .......+.+++.+||+.||++||++.|++++
T Consensus 280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 000111111111110 11223568899999999999999999999864
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=345.96 Aligned_cols=258 Identities=26% Similarity=0.327 Sum_probs=181.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecC------C
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD------E 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~ 748 (959)
.++|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 468999999999999999999864 6899999998653 233456688999999999999999999998654 5
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..++||||+ +++|.++++.. .+++..+..++.||++||+||| +.||+||||||+||+++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC-----C-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 679999999 67999988752 4889999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
++.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+.+......
T Consensus 179 a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~l~~i~~~~g~p~ 250 (367)
T 2fst_X 179 ARHTAD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI----DQLKLILRLVGTPG 250 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCSCC
T ss_pred cccccc----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCC
Confidence 976542 1234578999999998876 67899999999999999999999999653211 11111111111000
Q ss_pred cc-----------cccCc-cccCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 AA-----------DVLDP-TVLTADS-----KPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~~-----------~~~~~-~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ..... ...+... ......+.+++.+||..||++|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00 00000 0000000 0123457889999999999999999999874
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=329.07 Aligned_cols=251 Identities=23% Similarity=0.365 Sum_probs=197.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc----hhhHHHHHHHHHHHhcCCCCceeccccce--ecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK----TQGHREFTAEMETLGKVKHQNLVPLLGYC--SFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~--~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++ ......
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999975 68899999987542 23456788999999999999999999998 445678
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||++++ +.+++.... ...+++..++.++.|++.||+||| +.|++||||||+||+++.++.+||+|||.+.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999876 777776543 235889999999999999999999 8899999999999999999999999999998
Q ss_pred cccccc-ccccccccccccccCCCcCCCCC--CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 831 LISACE-THVSTDIAGTFGYIPPEYGQSGR--STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 831 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
...... ........||+.|+|||+..+.. ++.++||||+|+++|||++|+.||.... .. .....+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~-~~~~~i~~~~ 229 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-------IY-KLFENIGKGS 229 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-------HH-HHHHHHHHCC
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-------HH-HHHHHHhcCC
Confidence 654321 22223456899999999887644 3779999999999999999999986431 11 1222222221
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. .. .......+.+++.+||+.||++|||++|++++
T Consensus 230 ~------~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 Y------AI----PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp C------CC----CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred C------CC----CCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1 01 11123467789999999999999999999975
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-37 Score=347.60 Aligned_cols=198 Identities=27% Similarity=0.317 Sum_probs=170.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcC------CCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKV------KHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~~~~~~~~~~ 750 (959)
..+|++.++||+|+||.||+|++. +++.||||++.... .....+.+|+++++.+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457999999999999999999865 58899999997542 3345677788888777 577999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc--EEEccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE--AKVADFGL 828 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~ 828 (959)
++||||++ ++|.+++..... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++. +||+|||+
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKF--QGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEEeccC-CCHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 99999996 699999887542 34889999999999999999999 789999999999999999887 99999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 886 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~ 886 (959)
++.... ......||+.|+|||++.+..++.++|||||||++|||++|.+||...
T Consensus 249 a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 249 SCYEHQ----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CEETTC----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceecCC----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 975432 223457899999999999999999999999999999999999998654
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-37 Score=332.78 Aligned_cols=252 Identities=23% Similarity=0.360 Sum_probs=192.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceec----------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF---------- 746 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~---------- 746 (959)
.++|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 467899999999999999999965 7899999998643 3345678899999999999999999998754
Q ss_pred ---CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEE
Q 002155 747 ---DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 747 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 823 (959)
....++||||+++|+|.+++.... ..+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl 157 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSEN---LNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKI 157 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSC---GGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEE
T ss_pred cccCCceEEEEecCCCCCHHHhhhccc---cccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEE
Confidence 356799999999999999998643 35788899999999999999999 789999999999999999999999
Q ss_pred ccccccccccccc-------------ccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCcc
Q 002155 824 ADFGLARLISACE-------------THVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKD 889 (959)
Q Consensus 824 ~Dfg~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~ 889 (959)
+|||.+....... ........|++.|+|||++.+. .++.++||||+||++|||++ ||......
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~ 234 (303)
T 1zy4_A 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER 234 (303)
T ss_dssp CCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH
T ss_pred eeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH
Confidence 9999997654211 1112344689999999988754 68999999999999999998 54321110
Q ss_pred ccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 890 IEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......+..... ...+.........+.+++.+||+.||++|||+++++++
T Consensus 235 -------~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 235 -------VNILKKLRSVSI------EFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp -------HHHHHHHHSTTC------CCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -------HHHHHhcccccc------ccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 111222222111 11111222334457889999999999999999999874
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-37 Score=337.78 Aligned_cols=256 Identities=21% Similarity=0.341 Sum_probs=197.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|++.+ .||+|++.... ....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4678899999999999999999753 59999986432 2233457789999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++.... ..+++.+++.++.|++.|++||| +.|++||||||+||+++ ++.+||+|||+++.....
T Consensus 110 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~ 182 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAK---IVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL 182 (319)
T ss_dssp CCCSEEHHHHTTSSC---CCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred cccCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence 999999999997643 35788999999999999999999 88999999999999998 679999999998754321
Q ss_pred c----ccccccccccccccCCCcCCC---------CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 836 E----THVSTDIAGTFGYIPPEYGQS---------GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 836 ~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
. ........|++.|+|||++.+ ..++.++||||||+++|||++|+.||...... .....
T Consensus 183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~ 254 (319)
T 2y4i_B 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE--------AIIWQ 254 (319)
T ss_dssp -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH--------HHHHH
T ss_pred cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHH
Confidence 1 112223458999999998764 45788999999999999999999998643211 12222
Q ss_pred hhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
+........ .. ......+.+++.+||+.||++|||++++++.|+++..
T Consensus 255 ~~~~~~~~~-----~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~ 302 (319)
T 2y4i_B 255 MGTGMKPNL-----SQ---IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPK 302 (319)
T ss_dssp HHTTCCCCC-----CC---SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred hccCCCCCC-----Cc---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 222211111 11 0122357789999999999999999999999998753
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=342.48 Aligned_cols=200 Identities=27% Similarity=0.284 Sum_probs=169.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CC-----ceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQ-----NLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|++. +++.||||++... .....++..|+.+++.++ |+ +++++++++...+..
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 468999999999999999999865 6889999999743 233456778888888875 44 489999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC--CCCcEEEccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN--EEFEAKVADFGL 828 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfg~ 828 (959)
++||||++ |+|.+++..... ..+++..+..++.|++.||+|||.. ..||+||||||+||+++ .++.+||+|||+
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNF--RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEEecCC-CCHHHHHhhcCc--CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 99999996 599999987542 3488999999999999999999932 47999999999999995 477899999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 886 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~ 886 (959)
++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 208 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 208 SCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9876421 23457899999999999999999999999999999999999999753
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-37 Score=347.15 Aligned_cols=264 Identities=23% Similarity=0.234 Sum_probs=200.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC--------CCceecccccee---
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK--------HQNLVPLLGYCS--- 745 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~~~--- 745 (959)
.++|++.++||+|+||.||+|++. +++.||||++... ....+.+.+|+++++.++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 367999999999999999999864 6889999998753 334566888999999985 788999999987
Q ss_pred -cCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEECCCC----
Q 002155 746 -FDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP-HIIHRDIKASNILLNEEF---- 819 (959)
Q Consensus 746 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~Nill~~~~---- 819 (959)
.....++||||+ ++++.+++.... ...+++..++.++.||+.||+||| +. ||+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSN--YQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhh
Confidence 556789999999 556766665432 235889999999999999999999 77 999999999999999775
Q ss_pred ---------------------------------------------cEEEcccccccccccccccccccccccccccCCCc
Q 002155 820 ---------------------------------------------EAKVADFGLARLISACETHVSTDIAGTFGYIPPEY 854 (959)
Q Consensus 820 ---------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~ 854 (959)
.+||+|||.++..... .....||+.|+|||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHH
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChh
Confidence 7999999999865422 234578999999999
Q ss_pred CCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCC--chHHHHHHHhhcC--------c-cccccCc--------c
Q 002155 855 GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGG--NLVGWVFQKMKKG--------Q-AADVLDP--------T 915 (959)
Q Consensus 855 ~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~--~~~~~~~~~~~~~--------~-~~~~~~~--------~ 915 (959)
+.+..++.++|||||||++|||++|+.||.......... .....+....... . ....+.. .
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 999999999999999999999999999997543221110 0111111111000 0 0000000 0
Q ss_pred -----------ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 -----------VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 -----------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
............+.+++.+||+.||++|||++|++++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0012346677789999999999999999999999874
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-37 Score=338.79 Aligned_cols=253 Identities=26% Similarity=0.413 Sum_probs=194.9
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceec------CC
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSF------DE 748 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~------~~ 748 (959)
..++|++.+.||+|+||.||+|++. +++.||||++.... ...+.+.+|+.+++++ +||||+++++++.. .+
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 100 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence 4678999999999999999999974 68999999986433 2346788999999999 79999999999876 46
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..++||||+++|+|.+++.... ...+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 175 (326)
T 2x7f_A 101 QLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGV 175 (326)
T ss_dssp EEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCcC
Confidence 7899999999999999998643 235888999999999999999999 78999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCC-----CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHh
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQ-----SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKM 903 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (959)
+....... .......|++.|+|||++. +..++.++||||+||++|||++|..||...... ..... +
T Consensus 176 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~-~ 246 (326)
T 2x7f_A 176 SAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-------RALFL-I 246 (326)
T ss_dssp TC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHH-H
T ss_pred ceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-------HHHHH-h
Confidence 97654321 1223456899999999876 567899999999999999999999998543211 11111 1
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..... +.... ......+.+++.+||..||++||++++++++
T Consensus 247 ~~~~~-----~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 247 PRNPA-----PRLKS---KKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHSCC-----CCCSC---SCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hcCcc-----ccCCc---cccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11111 11111 1123467889999999999999999999873
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-37 Score=336.04 Aligned_cols=264 Identities=25% Similarity=0.324 Sum_probs=200.2
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEc--CCCCEEEEEEccccch--hhHHHHHHHHHHHhcC---CCCceecccccee----
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAAL--PDGKTVAVKKLSQAKT--QGHREFTAEMETLGKV---KHQNLVPLLGYCS---- 745 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~~~~~~~---- 745 (959)
+.++|++.+.||+|+||.||+|++ .+|+.||+|++..... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999997 3678999999864322 1223456677776666 8999999999986
Q ss_pred -cCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEc
Q 002155 746 -FDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVA 824 (959)
Q Consensus 746 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 824 (959)
.....++||||++ |+|.+++..... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT--TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEe
Confidence 4567899999998 599999987542 24889999999999999999999 8899999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh
Q 002155 825 DFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904 (959)
Q Consensus 825 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (959)
|||.++..... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .....+.....
T Consensus 163 Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~ 236 (326)
T 1blx_A 163 DFGLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV----DQLGKILDVIG 236 (326)
T ss_dssp SCCSCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHC
T ss_pred cCcccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHHHHHcC
Confidence 99999765432 2233457899999999999889999999999999999999999999653221 11111221111
Q ss_pred cCcccccc-------------CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 905 KGQAADVL-------------DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 905 ~~~~~~~~-------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......+. ...............+.+++.+||+.||++||+++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11000000 0000011112234567889999999999999999999864
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=334.24 Aligned_cols=265 Identities=21% Similarity=0.291 Sum_probs=204.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc--CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCc------eeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL--PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN------LVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~~ 749 (959)
.++|++.+.||+|+||.||+|.+ .+++.||||++.... ...+.+.+|+++++.++|++ ++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 35789999999999999999986 368899999987532 33566788999999887654 9999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC------------
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE------------ 817 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~------------ 817 (959)
.++||||+ +++|.+++..... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGF--LPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----
T ss_pred EEEEEcCC-CCCHHHHHHhcCC--CCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccc
Confidence 99999999 8899999976542 35789999999999999999999 889999999999999987
Q ss_pred -------CCcEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc
Q 002155 818 -------EFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI 890 (959)
Q Consensus 818 -------~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~ 890 (959)
++.+||+|||.++.... ......||+.|+|||++.+..++.++||||+||++|||++|..||......
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~- 240 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDE----HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK- 240 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTS----CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH-
T ss_pred cccccccCCCceEeeCcccccCcc----ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH-
Confidence 66899999999976432 223457899999999999989999999999999999999999999653221
Q ss_pred cCCchHHHHHHHhhcCc--------ccccc---------------------Cc-cccCCCCHHHHHHHHHHHHHcccCCC
Q 002155 891 EGGNLVGWVFQKMKKGQ--------AADVL---------------------DP-TVLTADSKPMMLKMLRIAGDCLSDNP 940 (959)
Q Consensus 891 ~~~~~~~~~~~~~~~~~--------~~~~~---------------------~~-~~~~~~~~~~~~~l~~li~~cl~~dP 940 (959)
+....+........ ..... .+ .............+.+++.+||+.||
T Consensus 241 ---~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 317 (339)
T 1z57_A 241 ---EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317 (339)
T ss_dssp ---HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred ---HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCc
Confidence 11111111100000 00000 00 00011233456778999999999999
Q ss_pred CCCCCHHHHHHH--HHhhh
Q 002155 941 AMRPTMLHVLKF--LKEIK 957 (959)
Q Consensus 941 ~~Rps~~ell~~--L~~l~ 957 (959)
++|||++|++++ +++++
T Consensus 318 ~~Rpt~~ell~hp~f~~~~ 336 (339)
T 1z57_A 318 AKRITLREALKHPFFDLLK 336 (339)
T ss_dssp TTSCCHHHHTTSGGGGGGG
T ss_pred ccccCHHHHhcCHHHHHHh
Confidence 999999999865 55443
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=325.01 Aligned_cols=252 Identities=25% Similarity=0.348 Sum_probs=202.2
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3468999999999999999999976 68999999986532 33456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC---CcEEEccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE---FEAKVADFGLAR 830 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~ 830 (959)
|||+++++|.+++.... .+++.+++.++.|++.|++||| +.|++||||||+||+++.+ +.+||+|||.+.
T Consensus 100 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 99999999999987654 5889999999999999999999 8899999999999999764 479999999997
Q ss_pred ccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
...... ......+++.|+|||.+.+ .++.++||||+|+++|+|++|..||...... .+...+..+....
T Consensus 173 ~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~ 241 (287)
T 2wei_A 173 CFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--------DILKRVETGKYAF 241 (287)
T ss_dssp TBCCCS--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCC
T ss_pred eecCCC--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCCC
Confidence 654322 2233468899999998765 4899999999999999999999998653211 1222222221110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+... .......+.+++.+||+.||++|||++|++++
T Consensus 242 --~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 242 --DLPQ----WRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp --CSGG----GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred --Cchh----hhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 0000 11223467889999999999999999999983
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=334.86 Aligned_cols=257 Identities=24% Similarity=0.358 Sum_probs=178.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHH-HHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEME-TLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... .....++..|+. +++.++||||+++++++..++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 367889999999999999999975 68999999987543 233344555555 777889999999999999999999999
Q ss_pred EeccCCCHHHHHhhhc-CCccccCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 755 EYMVNGSLDLWLRNRT-GSLEVLGWDKRYKIACGAARGLAFLHHGFTP-HIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||+++ +|.+++.... .....+++..+..++.|++.|+.||| +. ||+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99986 8888776421 11246889999999999999999999 66 9999999999999999999999999999766
Q ss_pred ccccccccccccccccccCCCcC----CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYG----QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
.... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||....... .......
T Consensus 177 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----------~~~~~~~- 243 (327)
T 3aln_A 177 VDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF----------DQLTQVV- 243 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------------CCCC-
T ss_pred cccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH----------HHHHHHh-
Confidence 4321 22234689999999998 45678999999999999999999999986432110 0111100
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
....+.............+.+++.+||+.||++||++.|++++
T Consensus 244 -~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 244 -KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp -CSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -cCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 0001111111112234568889999999999999999999763
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=330.34 Aligned_cols=252 Identities=22% Similarity=0.345 Sum_probs=195.5
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEcccc--chhhHHHHHHHHHHHhcCC--CCceeccccceecCCceEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVK--HQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~l 752 (959)
..++|++.+.||+|+||.||+|++.+++.||||++... .....+.+.+|++++++++ ||||+++++++..++..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 45679999999999999999999988999999998643 3344567889999999997 5999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||| +.+++|.+++.... .+++..++.++.|+++||+||| +.||+||||||+||++++ +.+||+|||+++..
T Consensus 106 v~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQM 176 (313)
T ss_dssp EEC-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC-
T ss_pred EEe-cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccccccc
Confidence 999 56889999998753 5788999999999999999999 789999999999999964 79999999999876
Q ss_pred cccccc-ccccccccccccCCCcCCC-----------CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHH
Q 002155 833 SACETH-VSTDIAGTFGYIPPEYGQS-----------GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 833 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (959)
...... ......|++.|+|||.+.+ ..++.++||||+|+++|||++|+.||...... .....
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------~~~~~ 250 (313)
T 3cek_A 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------ISKLH 250 (313)
T ss_dssp -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH------HHHHH
T ss_pred cCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH------HHHHH
Confidence 432221 1234468999999998765 46788999999999999999999998653221 11122
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.......... ... .....+.+++.+||+.||++||+++|++++
T Consensus 251 ~~~~~~~~~~-----~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 251 AIIDPNHEIE-----FPD----IPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHCTTSCCC-----CCC----CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhcccccC-----Ccc----cchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 2221111100 001 112467889999999999999999999874
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=339.07 Aligned_cols=271 Identities=24% Similarity=0.244 Sum_probs=190.8
Q ss_pred HHHHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCc--
Q 002155 673 HILEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE-- 749 (959)
Q Consensus 673 ~~~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-- 749 (959)
......++|++.+.||+|+||.||+|++. +|+.||||++..... ....+.+|++.++.++||||+++++++...+.
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 34556789999999999999999999975 689999998864322 23356678888899999999999999865333
Q ss_pred -----eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-CCcEEE
Q 002155 750 -----KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE-EFEAKV 823 (959)
Q Consensus 750 -----~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl 823 (959)
.++||||+++ ++.+.+.........+++..++.++.|++.|+.|||.. +.||+||||||+||+++. ++.+||
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~kl 173 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKL 173 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEEE
Confidence 7899999986 66555554333345688899999999999999999933 679999999999999996 899999
Q ss_pred cccccccccccccccccccccccccccCCCcCCCCC-CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 824 ADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGR-STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
+|||+++...... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||...... .....+.+.
T Consensus 174 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~----~~~~~~~~~ 247 (360)
T 3e3p_A 174 CDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA----GQLHEIVRV 247 (360)
T ss_dssp CCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHH
T ss_pred eeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH----HHHHHHHHH
Confidence 9999998765322 223457899999999876554 899999999999999999999999753221 111111111
Q ss_pred hhcC-----------c-cccccCc------cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKG-----------Q-AADVLDP------TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~-----------~-~~~~~~~------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.... . ....... .............+.+++.+||+.||++|||+.|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1000 0 0000000 00111122245678899999999999999999999875
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=347.95 Aligned_cols=253 Identities=23% Similarity=0.325 Sum_probs=187.8
Q ss_pred CCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEEecc
Q 002155 680 NFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
.|...++||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++..++..++||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 445568899999999987766689999999986432 34567899999876 89999999999999999999999996
Q ss_pred CCCHHHHHhhhcCCccc---cCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC-------------CcEE
Q 002155 759 NGSLDLWLRNRTGSLEV---LGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE-------------FEAK 822 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~---l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-------------~~~k 822 (959)
|+|.+++......... ..+..++.++.||+.||+||| +.||+||||||+||+++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 5999999865422111 133356789999999999999 8899999999999999654 4899
Q ss_pred Eccccccccccccccc---ccccccccccccCCCcCCC-------CCCCCcCcchhHHHHHHHHHh-CCCCCCCCCcccc
Q 002155 823 VADFGLARLISACETH---VSTDIAGTFGYIPPEYGQS-------GRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIE 891 (959)
Q Consensus 823 l~Dfg~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~ 891 (959)
|+|||+++........ ......||+.|+|||++.+ ..++.++||||+||++|||++ |..||.......
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~- 247 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE- 247 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-
Confidence 9999999876543221 1224579999999998865 568999999999999999999 999986532210
Q ss_pred CCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 892 GGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ........ .+.............+.+++.+||+.||++|||+.|++++
T Consensus 248 -----~---~i~~~~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 248 -----S---NIIRGIFS----LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp -----H---HHHHTCCC----CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -----H---HHhcCCCC----cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 1 11111100 0111222345677789999999999999999999999863
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=336.87 Aligned_cols=262 Identities=25% Similarity=0.329 Sum_probs=196.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecC-----Cce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD-----EEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~ 750 (959)
.++|++.+.||+|+||.||+|++. +|+.||||++.... ......+.+|+.++++++||||+++++++..+ ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467889999999999999999875 68899999986433 33445678999999999999999999987654 678
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||++ ++|.+++... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-----MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEeccC-ccHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 99999997 5999998763 4889999999999999999999 8899999999999999999999999999998
Q ss_pred cccccccc---------ccccccccccccCCCcCC-CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHH
Q 002155 831 LISACETH---------VSTDIAGTFGYIPPEYGQ-SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 831 ~~~~~~~~---------~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (959)
........ ......||+.|+|||++. +..++.++||||+||++|||++|+.||...... .....+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~ 236 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR----HQLLLIF 236 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHH
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHH
Confidence 66432111 122346899999999765 467899999999999999999999999653211 0011111
Q ss_pred HHhhcCccccc------------------cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 901 QKMKKGQAADV------------------LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 901 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........... ................+.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 11100000000 00000000001234567899999999999999999999874
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=336.06 Aligned_cols=253 Identities=21% Similarity=0.261 Sum_probs=172.5
Q ss_pred hcCCCCC-CeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceec----CCceE
Q 002155 678 TNNFCKT-NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF----DEEKL 751 (959)
Q Consensus 678 ~~~f~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~ 751 (959)
.++|.+. ++||+|+||.||+|++. +++.||||++..... ...+....++.++||||+++++++.. +...+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH----HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH----HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 5678885 46999999999999876 689999999864321 12223344566799999999999865 44579
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---CCcEEEccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE---EFEAKVADFGL 828 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~ 828 (959)
+||||+++|+|.+++..... ..+++.+++.++.|++.||+||| +.||+||||||+||+++. ++.+||+|||+
T Consensus 103 lv~e~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGD--QAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-C--CCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEeccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEecccc
Confidence 99999999999999986542 35899999999999999999999 889999999999999976 45599999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
++.... .......+|+.|+|||++.+..++.++||||+|+++|||++|..||........ .......+.....
T Consensus 178 ~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~ 250 (336)
T 3fhr_A 178 AKETTQ---NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI----SPGMKRRIRLGQY 250 (336)
T ss_dssp CEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------
T ss_pred ceeccc---cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh----hhhHHHhhhcccc
Confidence 976542 222345689999999999888899999999999999999999999965432211 0001111111100
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..+ ..........+.+++.+||+.||++|||++|++++
T Consensus 251 ---~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 251 ---GFP---NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ---CCC---TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ---ccC---chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 001 11112234567889999999999999999999974
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=334.51 Aligned_cols=262 Identities=24% Similarity=0.317 Sum_probs=192.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceecccccee-----------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS----------- 745 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----------- 745 (959)
.++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 467889999999999999999976 48999999987766666778899999999999999999998873
Q ss_pred ---cCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC-CCCcE
Q 002155 746 ---FDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN-EEFEA 821 (959)
Q Consensus 746 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~ 821 (959)
.....++||||++ |+|.+++... .+++..++.++.|++.|++||| +.||+||||||+||+++ +++.+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG-----PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC-----CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeE
Confidence 3467799999997 5999998653 4788999999999999999999 88999999999999997 56799
Q ss_pred EEcccccccccccccc--cccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHH
Q 002155 822 KVADFGLARLISACET--HVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGW 898 (959)
Q Consensus 822 kl~Dfg~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 898 (959)
||+|||.++....... .......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||...... .....
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~----~~~~~ 236 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL----EQMQL 236 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH----HHHHH
Confidence 9999999986543211 11233457899999997655 67899999999999999999999999754221 11111
Q ss_pred HHHHhhcCc----------cc-----cccCccc-cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 899 VFQKMKKGQ----------AA-----DVLDPTV-LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 899 ~~~~~~~~~----------~~-----~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+........ .. ....+.. ...........+.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 237 ILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 111000000 00 0000000 000011234568899999999999999999999874
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-36 Score=336.44 Aligned_cols=257 Identities=24% Similarity=0.287 Sum_probs=193.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCce----
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK---- 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~---- 750 (959)
.++|.+.+.||+|+||.||+|++. +|+.||||++.... ......+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 467888999999999999999865 68999999987532 33356788999999999999999999999876654
Q ss_pred --EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 751 --LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 751 --~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
++||||++ ++|.+++.. .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM------EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEEcccc-ccHHHHhhc------CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999997 588877742 3789999999999999999999 78999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
++.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... +....+........
T Consensus 191 a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~i~~~~~~~~ 262 (371)
T 4exu_A 191 ARHADA----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL----DQLTQILKVTGVPG 262 (371)
T ss_dssp C------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCC
T ss_pred cccccc----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHHhCCCc
Confidence 976532 2234578999999998876 67899999999999999999999999653211 11111111000000
Q ss_pred cc--ccc-----------CccccCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 AA--DVL-----------DPTVLTA----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~~--~~~-----------~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ... .+..... ........+.+++.+||+.||++|||++|++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00 000 0000000 011224568899999999999999999999875
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-36 Score=352.08 Aligned_cols=266 Identities=24% Similarity=0.301 Sum_probs=198.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceec------CCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSF------DEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~ 749 (959)
.++|++.++||+|+||.||+|.+. +|+.||||++... .....+.+.+|++++++++||||+++++++.. ++.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 368999999999999999999875 6899999998754 34445678899999999999999999998755 677
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc---EEEccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE---AKVADF 826 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Df 826 (959)
.++||||+++|+|.+++..... ...+++..++.++.|++.|++||| +.||+||||||+||+++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEccc
Confidence 8999999999999999987542 235788899999999999999999 789999999999999987764 999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCc-hHHHHHHH-hh
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGN-LVGWVFQK-MK 904 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~-~~~~~~~~-~~ 904 (959)
|.+...... .......||+.|+|||++.+..++.++||||+||++|||++|..||........-.. ........ ..
T Consensus 169 G~a~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 169 GYAKELDQG--ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV 246 (676)
T ss_dssp CCCCBTTSC--CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCS
T ss_pred ccccccccc--cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhh
Confidence 999876532 223445789999999999999999999999999999999999999965422110000 00000000 00
Q ss_pred ----cCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 002155 905 ----KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHV 949 (959)
Q Consensus 905 ----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el 949 (959)
.+.....................+.+++.+||+.||++|||++|+
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 000000000011112344567788999999999999999999884
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=332.00 Aligned_cols=218 Identities=22% Similarity=0.256 Sum_probs=151.7
Q ss_pred cCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCc
Q 002155 313 LGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLV 392 (959)
Q Consensus 313 ~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 392 (959)
+..+++|+.|++++|++++. .+..+++|+.|++++|.+++. ....+|+.|++++|.++.. |.. ..++|+
T Consensus 161 ~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~ 229 (390)
T 3o6n_A 161 FQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP--VNVELT 229 (390)
T ss_dssp TSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCC
T ss_pred ccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-ccc--cccccc
Confidence 33344444444444444432 234456666677777666532 2334677777777777633 322 236777
Q ss_pred EEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCC
Q 002155 393 KLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSN 472 (959)
Q Consensus 393 ~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~ 472 (959)
.|++++|.+++. ..+..+++|++|++++|.+++..|..+..+++|+.|++++|+++++
T Consensus 230 ~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-------------------- 287 (390)
T 3o6n_A 230 ILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL-------------------- 287 (390)
T ss_dssp EEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEE--------------------
T ss_pred EEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCccc--------------------
Confidence 888888877743 5677778888888888888777777788888888888888877643
Q ss_pred cccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCC
Q 002155 473 NLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVP 552 (959)
Q Consensus 473 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 552 (959)
|..+..+++|++|+|++|+++ .+|..+..+++|++|++++|+|++. + +..+++|+.|++++|++.+...
T Consensus 288 -------~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~ 356 (390)
T 3o6n_A 288 -------NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSL 356 (390)
T ss_dssp -------ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHH
T ss_pred -------CcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhH
Confidence 233456788999999999998 6777888899999999999999864 3 6788899999999999987532
Q ss_pred CCcccCCCccccccCCCCCCCCC
Q 002155 553 RSGICQNLSKISLTGNKDLCGKI 575 (959)
Q Consensus 553 ~~~~~~~l~~l~l~~N~~~c~~~ 575 (959)
. ..+..+....+.+++..|.++
T Consensus 357 ~-~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 357 R-ALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp H-HHTTTCCTTTBCCCCSCCCTT
T ss_pred H-HHHHHHHhhcccccCceeccc
Confidence 2 335667777788898888754
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-37 Score=334.49 Aligned_cols=242 Identities=25% Similarity=0.382 Sum_probs=189.8
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh------hHHHHHHHHHHHhcC----CCCceecccccee
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ------GHREFTAEMETLGKV----KHQNLVPLLGYCS 745 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l----~h~niv~~~~~~~ 745 (959)
..++|++.+.||+|+||.||+|++. +++.||||++...... ....+.+|+.+++++ +||||+++++++.
T Consensus 29 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~ 108 (312)
T 2iwi_A 29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE 108 (312)
T ss_dssp ----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred hhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence 4578999999999999999999874 6889999998654321 122355789988888 8999999999999
Q ss_pred cCCceEEEEEe-ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC-CCCcEEE
Q 002155 746 FDEEKLLVYEY-MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN-EEFEAKV 823 (959)
Q Consensus 746 ~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl 823 (959)
..+..++|||| +.+++|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++ .++.+||
T Consensus 109 ~~~~~~~v~e~~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 109 TQEGFMLVLERPLPAQDLFDYITEKG----PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp ----CEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEE
T ss_pred cCCeEEEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEE
Confidence 99999999999 78999999998754 5889999999999999999999 78999999999999998 8899999
Q ss_pred cccccccccccccccccccccccccccCCCcCCCCCCC-CcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 824 ADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRST-TRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
+|||.+...... ......|+..|+|||++.+..+. .++||||+|+++|||++|+.||.... ..
T Consensus 182 ~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------------~~ 245 (312)
T 2iwi_A 182 IDFGSGALLHDE---PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------------EI 245 (312)
T ss_dssp CCCSSCEECCSS---CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------------HH
T ss_pred EEcchhhhcccC---cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------------HH
Confidence 999999876432 22345689999999988766664 58999999999999999999985420 01
Q ss_pred hhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... .. .. .......+.+++.+||+.||++|||++|++++
T Consensus 246 ~~~-~~------~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 246 LEA-EL------HF----PAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp HHT-CC------CC----CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred hhh-cc------CC----cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 00 00 11123467889999999999999999999874
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-36 Score=341.19 Aligned_cols=250 Identities=23% Similarity=0.361 Sum_probs=186.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
..+|...++||+|+||+||.....+++.||||++...... .+.+|+++++++ +||||+++++++.++...|+||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 4568888999999999966555557999999998653322 246799999999 799999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-----CCcEEEcccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE-----EFEAKVADFGLARL 831 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-----~~~~kl~Dfg~~~~ 831 (959)
++ |+|.+++..... ...+.+++.++.||++||+||| +.||+||||||+||+++. ..++||+|||+++.
T Consensus 100 ~~-g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 100 CA-ATLQEYVEQKDF---AHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp CS-EEHHHHHHSSSC---CCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred CC-CCHHHHHHhcCC---CccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 96 599999986542 2334456789999999999999 889999999999999953 24688999999987
Q ss_pred cccccc--cccccccccccccCCCcCC---CCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhc
Q 002155 832 ISACET--HVSTDIAGTFGYIPPEYGQ---SGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKK 905 (959)
Q Consensus 832 ~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (959)
...... .......||+.|+|||++. ...++.++||||+||++|||++ |..||+..... .. .....
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~--------~~-~~~~~ 243 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--------QA-NILLG 243 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH--------HH-HHHTT
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH--------HH-HHHhc
Confidence 643221 2233457999999999987 4567889999999999999999 88998543221 11 11111
Q ss_pred CccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...... ..........+.+++.+||+.||++|||++|++++
T Consensus 244 ~~~~~~------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 244 ACSLDC------LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp CCCCTT------SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cCCccc------cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 111111 11122344557889999999999999999999853
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-36 Score=337.55 Aligned_cols=264 Identities=20% Similarity=0.220 Sum_probs=198.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC-----------CCceecccccee
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-----------HQNLVPLLGYCS 745 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~~ 745 (959)
.++|++.+.||+|+||.||+|++. +++.||||++.... ...+.+.+|+.++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 357889999999999999999864 68999999987432 33456788999988886 899999999987
Q ss_pred cCC----ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEEC----
Q 002155 746 FDE----EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP-HIIHRDIKASNILLN---- 816 (959)
Q Consensus 746 ~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~Nill~---- 816 (959)
..+ ..++||||+ +++|.+++..... ..+++..++.++.||+.||+||| +. ||+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEH--RGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEET
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhc--cCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCC
Confidence 644 789999999 8899999987442 34889999999999999999999 76 999999999999994
Q ss_pred --CCCcEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCC-
Q 002155 817 --EEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGG- 893 (959)
Q Consensus 817 --~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~- 893 (959)
..+.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||..........
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 4458999999999765422 234478999999999999999999999999999999999999997543211100
Q ss_pred -chHHHHHHHhhcCc------------------cccccCc----------cccCCCCHHHHHHHHHHHHHcccCCCCCCC
Q 002155 894 -NLVGWVFQKMKKGQ------------------AADVLDP----------TVLTADSKPMMLKMLRIAGDCLSDNPAMRP 944 (959)
Q Consensus 894 -~~~~~~~~~~~~~~------------------~~~~~~~----------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 944 (959)
.....+........ ....... .............+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 00111111110000 0000000 001123466778899999999999999999
Q ss_pred CHHHHHHH
Q 002155 945 TMLHVLKF 952 (959)
Q Consensus 945 s~~ell~~ 952 (959)
|++|++++
T Consensus 327 t~~ell~h 334 (373)
T 1q8y_A 327 DAGGLVNH 334 (373)
T ss_dssp CHHHHHTC
T ss_pred CHHHHhhC
Confidence 99999874
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=330.83 Aligned_cols=256 Identities=24% Similarity=0.278 Sum_probs=193.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCc-----
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE----- 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 749 (959)
.++|.+.+.||+|+||.||+|++. +|+.||||++.... ......+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 357888999999999999999875 68999999986532 3334668899999999999999999999877654
Q ss_pred -eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 750 -KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 750 -~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
.++||||++ ++|.+++.. .+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999997 588777642 3788999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC-
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG- 906 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 906 (959)
++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...... +....+.......
T Consensus 173 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~----~~~~~i~~~~~~~~ 244 (353)
T 3coi_A 173 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL----DQLTQILKVTGVPG 244 (353)
T ss_dssp TTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH----HHHHHHHHHHCBCC
T ss_pred ccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCC
Confidence 9765321 234578999999998776 67899999999999999999999998653211 1111111100000
Q ss_pred -----------------ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 -----------------QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 -----------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.......+ ............+.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 245 TEFVQKLNDKAAKSYIQSLPQTPRK-DFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHTTCSCHHHHHHHHTSCBCSSC-CTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHhhHHHHHHHHhCcCCCCc-cHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000000 0011112334578899999999999999999999864
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=331.95 Aligned_cols=241 Identities=26% Similarity=0.403 Sum_probs=196.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh------hHHHHHHHHHHHhcCC--CCceeccccceecCC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ------GHREFTAEMETLGKVK--HQNLVPLLGYCSFDE 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~ 748 (959)
.++|++.+.||+|+||.||+|++. +++.||||++...... ....+.+|+.++++++ ||||+++++++..++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 467999999999999999999864 6889999998654321 2234667999999996 599999999999999
Q ss_pred ceEEEEEeccC-CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC-CCCcEEEccc
Q 002155 749 EKLLVYEYMVN-GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN-EEFEAKVADF 826 (959)
Q Consensus 749 ~~~lv~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Df 826 (959)
..++||||+.+ ++|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++ .++.+||+||
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITERG----ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred cEEEEEEcCCCCccHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 99999999986 89999998754 5889999999999999999999 88999999999999998 7789999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhc
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK 905 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (959)
|+++..... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... ....
T Consensus 195 g~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------------~~~~- 257 (320)
T 3a99_A 195 GSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------------EIIR- 257 (320)
T ss_dssp TTCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------------HHHH-
T ss_pred ccccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------------hhhc-
Confidence 999876432 2234578999999998876665 678999999999999999999985421 0111
Q ss_pred CccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... .. + . .....+.+++.+||+.||++|||++|++++
T Consensus 258 ~~~--~~-~---~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 258 GQV--FF-R---Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CCC--CC-S---S----CCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccc--cc-c---c----cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 100 00 0 1 122467889999999999999999999874
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=329.86 Aligned_cols=260 Identities=22% Similarity=0.276 Sum_probs=198.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CC-CEEEEEEccccchhhHHHHHHHHHHHhcCCCCc------eeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DG-KTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN------LVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~~ 749 (959)
.++|++.+.||+|+||.||+|++. ++ +.||+|++... ....+.+.+|+.+++.++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 367889999999999999999875 34 68999998753 233566788999999997665 8889999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE--------------
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL-------------- 815 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill-------------- 815 (959)
.++||||+ ++++.+++..... ..+++.+++.++.|++.||+||| +.||+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNF--QPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred EEEEEecc-CCChHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccc
Confidence 99999999 6677777765432 35889999999999999999999 8999999999999999
Q ss_pred -----CCCCcEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc
Q 002155 816 -----NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI 890 (959)
Q Consensus 816 -----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~ 890 (959)
+.++.+||+|||.++.... ......||+.|+|||++.+..++.++||||+||++|||++|..||......
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~- 245 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHE----HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR- 245 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTS----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-
T ss_pred ccccccCCCcEEEeecCccccccc----cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 5678999999999976432 223457899999999999999999999999999999999999999753221
Q ss_pred cCCchHHHHHHHhhcCc--------cccc-c--------------------Cc-cccCCCCHHHHHHHHHHHHHcccCCC
Q 002155 891 EGGNLVGWVFQKMKKGQ--------AADV-L--------------------DP-TVLTADSKPMMLKMLRIAGDCLSDNP 940 (959)
Q Consensus 891 ~~~~~~~~~~~~~~~~~--------~~~~-~--------------------~~-~~~~~~~~~~~~~l~~li~~cl~~dP 940 (959)
.....+........ .... . .+ .............+.+++.+||+.||
T Consensus 246 ---~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 322 (355)
T 2eu9_A 246 ---EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDP 322 (355)
T ss_dssp ---HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred ---HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCCh
Confidence 11111111100000 0000 0 00 00011123345678899999999999
Q ss_pred CCCCCHHHHHHH
Q 002155 941 AMRPTMLHVLKF 952 (959)
Q Consensus 941 ~~Rps~~ell~~ 952 (959)
++|||++|++++
T Consensus 323 ~~Rpt~~e~l~h 334 (355)
T 2eu9_A 323 AQRITLAEALLH 334 (355)
T ss_dssp TTSCCHHHHTTS
T ss_pred hhCcCHHHHhcC
Confidence 999999999854
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=326.44 Aligned_cols=252 Identities=23% Similarity=0.344 Sum_probs=179.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.+.||+|+||.||+|++. +|+.||||++..... ...+.+.++..+++.++||||+++++++..++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467888999999999999999975 689999999865432 22233445566788889999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP-HIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
||+ ++.+..+..... ..+++..++.++.|++.|++||| +. |++||||||+||+++.++.+||+|||.+....
T Consensus 104 e~~-~~~~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQ---GPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp CCC-SEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecc-CCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 999 556666555433 35889999999999999999999 64 99999999999999999999999999997654
Q ss_pred cccccccccccccccccCCCcCC-----CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQ-----SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
... ......+++.|+|||++. ...++.++||||+|+++|||++|+.||...... ......... ...
T Consensus 177 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~-~~~ 247 (318)
T 2dyl_A 177 DDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD------FEVLTKVLQ-EEP 247 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH------HHHHHHHHH-SCC
T ss_pred CCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc------HHHHHHHhc-cCC
Confidence 321 223446899999999874 556889999999999999999999998643221 111112211 111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... + ........+.+++.+||+.||++||+++|++++
T Consensus 248 ~~~--~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 248 PLL--P-----GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp CCC--C-----SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CCC--C-----ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 110 0 011123467889999999999999999999864
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=345.46 Aligned_cols=333 Identities=21% Similarity=0.246 Sum_probs=220.1
Q ss_pred cccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEcc
Q 002155 138 PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLN 217 (959)
Q Consensus 138 ~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 217 (959)
.++.|++++|.+..+.+..+..+++|+.|++++|.+++..|..|+.+++|++|+|++|.|++..|..|+++++|++|+|+
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 35566666666665555555556666666666666665555566666666666666666665555556666666666666
Q ss_pred CCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccc
Q 002155 218 SNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGV 297 (959)
Q Consensus 218 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~ 297 (959)
+|.|+.+++..|+++++|++|+|++|.+++..|..|+.+++|+.|+|++|.++
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--------------------------- 184 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT--------------------------- 184 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCS---------------------------
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCC---------------------------
Confidence 66666544444566666666666666666555555666666666666665553
Q ss_pred eecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCccc
Q 002155 298 FDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQL 377 (959)
Q Consensus 298 l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 377 (959)
+.. +..+++|+.|++++|.+++ +....+|+.|++++|.+
T Consensus 185 ---------------------------------~~~---~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l 223 (597)
T 3oja_B 185 ---------------------------------HVD---LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSI 223 (597)
T ss_dssp ---------------------------------BCC---GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCC
T ss_pred ---------------------------------CcC---hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCcc
Confidence 211 2234455555555555542 12233566666666665
Q ss_pred CCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccc
Q 002155 378 TGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELF 457 (959)
Q Consensus 378 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~ 457 (959)
+...+ .+ .++|+.|+|++|.+++ +..+..+++|++|+|++|.+++..|..|..+++|+.|+|++|+++++
T Consensus 224 ~~~~~-~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l----- 293 (597)
T 3oja_B 224 NVVRG-PV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL----- 293 (597)
T ss_dssp CEEEC-SC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEE-----
T ss_pred ccccc-cc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCC-----
Confidence 53222 21 2467777777777774 36677788888888888888877778888888888888888887743
Q ss_pred cchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCc
Q 002155 458 SNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNL 537 (959)
Q Consensus 458 ~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 537 (959)
|..+..+++|+.|+|++|.++ .+|..+..+++|++|+|++|+|++. | +..+++|
T Consensus 294 ----------------------~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L 347 (597)
T 3oja_B 294 ----------------------NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTL 347 (597)
T ss_dssp ----------------------ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCC
T ss_pred ----------------------CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCC
Confidence 233445788999999999998 6888888899999999999999865 3 6778899
Q ss_pred cEEecccCcCcccCCCCcccCCCccccccCCCCCCCCC
Q 002155 538 LYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKI 575 (959)
Q Consensus 538 ~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~~ 575 (959)
+.|++++|++.+.... ..+..+....+.+++..|+.+
T Consensus 348 ~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 348 KNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp SEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred CEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 9999999999876432 234566677788999999864
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=324.66 Aligned_cols=311 Identities=22% Similarity=0.232 Sum_probs=227.3
Q ss_pred CcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeE
Q 002155 184 AAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLV 263 (959)
Q Consensus 184 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 263 (959)
+++++.|++++|.++...+..|..+++|++|+|++|.++.+.+..|..+++|++|+|++|++++..|..|+.+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 46667777777777654444566677777777777777766666677777777777777777766666677777777777
Q ss_pred cccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCC
Q 002155 264 LSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNL 343 (959)
Q Consensus 264 Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L 343 (959)
|++|+++. ..+..+..+++|+.|++++|++++..+..|..+++|
T Consensus 124 L~~n~l~~------------------------------------l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 167 (390)
T 3o6n_A 124 LERNDLSS------------------------------------LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSL 167 (390)
T ss_dssp CCSSCCCC------------------------------------CCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTC
T ss_pred CCCCccCc------------------------------------CCHHHhcCCCCCcEEECCCCccCccChhhccCCCCC
Confidence 77666541 112224555666666666666666677778888888
Q ss_pred CEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCc
Q 002155 344 TTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN 423 (959)
Q Consensus 344 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 423 (959)
++|++++|++++. .+..+++|+.|++++|.+++ +...++|++|++++|.+... |..+ .++|++|++++|
T Consensus 168 ~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~~--~~~L~~L~l~~n 236 (390)
T 3o6n_A 168 QNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGPV--NVELTILKLQHN 236 (390)
T ss_dssp CEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEE-ECCC--CSSCCEEECCSS
T ss_pred CEEECCCCcCCcc---ccccccccceeecccccccc-----cCCCCcceEEECCCCeeeec-cccc--cccccEEECCCC
Confidence 8888888888754 24566778888888887763 23445777888888877743 3222 356777777777
Q ss_pred cccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccC
Q 002155 424 ELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEI 503 (959)
Q Consensus 424 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 503 (959)
.+++. ..+..+++|+.|++++|++++ ..|..|..+++|+.|+|++|+++ .+
T Consensus 237 ~l~~~--~~l~~l~~L~~L~Ls~n~l~~--------------------------~~~~~~~~l~~L~~L~L~~n~l~-~~ 287 (390)
T 3o6n_A 237 NLTDT--AWLLNYPGLVEVDLSYNELEK--------------------------IMYHPFVKMQRLERLYISNNRLV-AL 287 (390)
T ss_dssp CCCCC--GGGGGCTTCSEEECCSSCCCE--------------------------EESGGGTTCSSCCEEECCSSCCC-EE
T ss_pred CCccc--HHHcCCCCccEEECCCCcCCC--------------------------cChhHccccccCCEEECCCCcCc-cc
Confidence 77642 456666777777766666653 45667778999999999999999 56
Q ss_pred CcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccCCCccccccCCCCCCC
Q 002155 504 PPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCG 573 (959)
Q Consensus 504 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~ 573 (959)
|..+..+++|++|+|++|+++ .+|..+..+++|++|++++|++++++ ...+++|+.+++.+|+|.|+
T Consensus 288 ~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 288 NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHH
T ss_pred CcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC--chhhccCCEEEcCCCCccch
Confidence 777889999999999999998 57778899999999999999999875 45678999999999999885
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-35 Score=312.35 Aligned_cols=231 Identities=12% Similarity=0.113 Sum_probs=181.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+..+++++||||+++++++..++..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999976 48999999997543 233467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||++|++|.++++.. ....++.+++.|++.||+||| +.||+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 999999999999542 244578889999999999999 8899999999999999999999998543
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
|++ +++.++|||||||++|||++|+.||........-... ..........+
T Consensus 175 --------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~--------~~~~~~~~~~~ 225 (286)
T 3uqc_A 175 --------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA--------ERDTAGQPIEP 225 (286)
T ss_dssp --------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC--------CBCTTSCBCCH
T ss_pred --------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH--------HHHhccCCCCh
Confidence 333 3688999999999999999999999764322100000 00000000000
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.. ........+.+++.+||+.||++| |++|+++.|+++..
T Consensus 226 ~~---~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 226 AD---IDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp HH---HCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred hh---cccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 00 011233468899999999999999 99999999998753
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=312.06 Aligned_cols=306 Identities=25% Similarity=0.340 Sum_probs=191.4
Q ss_pred ccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCE
Q 002155 158 WNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTT 237 (959)
Q Consensus 158 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 237 (959)
..+++|++|++++|.+. .++ .+..+++|++|++++|.+++. +. +..+++|++|++++|.++. + ..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~ 114 (347)
T 4fmz_A 41 EELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRE 114 (347)
T ss_dssp HHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSE
T ss_pred hhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCE
Confidence 34555666666666555 233 255666666666666666632 22 6666666666666666653 2 24666666666
Q ss_pred EEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcc
Q 002155 238 LDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCV 317 (959)
Q Consensus 238 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~ 317 (959)
|++++|++++..+ +..+++|+.|++++|... .. +..+..++
T Consensus 115 L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~------------------------------------~~-~~~~~~l~ 155 (347)
T 4fmz_A 115 LYLNEDNISDISP--LANLTKMYSLNLGANHNL------------------------------------SD-LSPLSNMT 155 (347)
T ss_dssp EECTTSCCCCCGG--GTTCTTCCEEECTTCTTC------------------------------------CC-CGGGTTCT
T ss_pred EECcCCcccCchh--hccCCceeEEECCCCCCc------------------------------------cc-ccchhhCC
Confidence 6666666664422 566666666666665432 11 12245555
Q ss_pred cccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEcc
Q 002155 318 VVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLT 397 (959)
Q Consensus 318 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 397 (959)
+|+.|++++|.+++..+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|++|+++
T Consensus 156 ~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~ 229 (347)
T 4fmz_A 156 GLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIG 229 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECC
T ss_pred CCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEcc
Confidence 66666666666654433 6667777777777777764433 6666777777777777764433 6667777777777
Q ss_pred CCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCC
Q 002155 398 GNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDG 477 (959)
Q Consensus 398 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~ 477 (959)
+|++++..+ +..+++|++|++++|.+++. ..+..+++|+.|++++|+++++
T Consensus 230 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~------------------------- 280 (347)
T 4fmz_A 230 NNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI------------------------- 280 (347)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-------------------------
T ss_pred CCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC-------------------------
Confidence 777764433 66677777777777777642 3566667777777777666543
Q ss_pred CCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCc
Q 002155 478 GLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLE 548 (959)
Q Consensus 478 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 548 (959)
..+..+++|+.|++++|++++..|..++.+++|++|++++|++++..| +..+++|++|++++|+++
T Consensus 281 ---~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 281 ---SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp ---GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ---hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 124456777888888888877777777778888888888888876555 777788888888888765
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-34 Score=337.83 Aligned_cols=312 Identities=21% Similarity=0.224 Sum_probs=228.3
Q ss_pred CcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeE
Q 002155 184 AAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLV 263 (959)
Q Consensus 184 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 263 (959)
+.+++.|++++|.+....+..|.++++|++|+|++|.|+++.|..|+.+++|++|+|++|.+++..|..|+.+++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 45666666666666655555566666777777777777666666666777777777777777666666666666676666
Q ss_pred cccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCC
Q 002155 264 LSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNL 343 (959)
Q Consensus 264 Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L 343 (959)
|++|.+++ ..+..|+.+++|+.|++++|.+++..|..|..+++|
T Consensus 130 L~~n~l~~------------------------------------l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 173 (597)
T 3oja_B 130 LERNDLSS------------------------------------LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSL 173 (597)
T ss_dssp CCSSCCCC------------------------------------CCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTC
T ss_pred eeCCCCCC------------------------------------CCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcC
Confidence 66665541 222334555666666666666666677778888888
Q ss_pred CEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCc
Q 002155 344 TTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN 423 (959)
Q Consensus 344 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 423 (959)
++|++++|.+++.. +..+++|+.|++++|.+++ +...++|+.|++++|.+....+. + .++|+.|+|++|
T Consensus 174 ~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n 242 (597)
T 3oja_B 174 QNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHN 242 (597)
T ss_dssp CEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSS
T ss_pred cEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCcccccccc-c--CCCCCEEECCCC
Confidence 88888888887642 4556778888888887763 34456788888888887743322 2 246777777777
Q ss_pred cccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccC
Q 002155 424 ELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEI 503 (959)
Q Consensus 424 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 503 (959)
.+++ +..+..+++|+.|+|++|.+++ ..|..|+.+++|+.|+|++|++++ +
T Consensus 243 ~l~~--~~~l~~l~~L~~L~Ls~N~l~~--------------------------~~~~~~~~l~~L~~L~Ls~N~l~~-l 293 (597)
T 3oja_B 243 NLTD--TAWLLNYPGLVEVDLSYNELEK--------------------------IMYHPFVKMQRLERLYISNNRLVA-L 293 (597)
T ss_dssp CCCC--CGGGGGCTTCSEEECCSSCCCE--------------------------EESGGGTTCSSCCEEECTTSCCCE-E
T ss_pred CCCC--ChhhccCCCCCEEECCCCccCC--------------------------CCHHHhcCccCCCEEECCCCCCCC-C
Confidence 7764 3566677777777777666654 456677789999999999999995 6
Q ss_pred CcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccCCCccccccCCCCCCCC
Q 002155 504 PPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 504 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~ 574 (959)
|..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|++.+++ ...++.|+.+++++|+|.|++
T Consensus 294 ~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 294 NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHHH
T ss_pred CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC--hhhcCCCCEEEeeCCCCCChh
Confidence 888888999999999999999 57888999999999999999999885 445789999999999999975
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-33 Score=309.63 Aligned_cols=306 Identities=23% Similarity=0.336 Sum_probs=149.5
Q ss_pred cCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCc
Q 002155 38 LGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLS 117 (959)
Q Consensus 38 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 117 (959)
+..++.|++|++++|++. .+|. +..+++|++|+|++|++++ +|. +..+++|++|++++|.+++. ..|.++++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITDI--SALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCS
T ss_pred chhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccCc--hHHcCCCcCC
Confidence 345666777777777765 4443 6677777777777777763 333 66777777777777776643 2466666666
Q ss_pred eeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcc
Q 002155 118 QLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNML 197 (959)
Q Consensus 118 ~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i 197 (959)
+|++++|.+.+..+ +..+++|++|++++|..... +..+..+++|++|++++|.+
T Consensus 114 ~L~l~~n~i~~~~~-------------------------~~~l~~L~~L~l~~n~~~~~-~~~~~~l~~L~~L~l~~~~~ 167 (347)
T 4fmz_A 114 ELYLNEDNISDISP-------------------------LANLTKMYSLNLGANHNLSD-LSPLSNMTGLNYLTVTESKV 167 (347)
T ss_dssp EEECTTSCCCCCGG-------------------------GTTCTTCCEEECTTCTTCCC-CGGGTTCTTCCEEECCSSCC
T ss_pred EEECcCCcccCchh-------------------------hccCCceeEEECCCCCCccc-ccchhhCCCCcEEEecCCCc
Confidence 66666655543221 22333333333333322211 11244445555555555554
Q ss_pred cccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCC
Q 002155 198 KGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKP 277 (959)
Q Consensus 198 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 277 (959)
.+..+ +..+++|++|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|++|++++|.+++
T Consensus 168 ~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~------ 235 (347)
T 4fmz_A 168 KDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD------ 235 (347)
T ss_dssp CCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC------
T ss_pred CCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC------
Confidence 43221 4445555555555555543222 4444555555555555543322 4444455555544444431
Q ss_pred cchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCC
Q 002155 278 SSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPI 357 (959)
Q Consensus 278 ~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 357 (959)
. +. +..+++|+.|++++|.+++. ..+..+++|++|++++|++++.
T Consensus 236 ------------------------------~-~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~- 280 (347)
T 4fmz_A 236 ------------------------------L-SP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI- 280 (347)
T ss_dssp ------------------------------C-GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-
T ss_pred ------------------------------C-cc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC-
Confidence 1 11 23333333444444443322 2344455555555555555532
Q ss_pred CCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccc
Q 002155 358 PSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNEL 425 (959)
Q Consensus 358 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 425 (959)
..+..+++|+.|++++|++++..+..+..+++|++|++++|++++..| +..+++|++|++++|.|
T Consensus 281 -~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 281 -SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVI 345 (347)
T ss_dssp -GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC--
T ss_pred -hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhcc
Confidence 234444455555555555544444444445555555555555443332 44444444444444444
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-35 Score=351.51 Aligned_cols=239 Identities=23% Similarity=0.327 Sum_probs=191.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC--CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCc-----
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP--DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE----- 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 749 (959)
.++|++.+.||+|+||.||+|++. +|+.||||++... .......+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 368999999999999999999875 5899999998643 33445678899999999999999999999987665
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.|+||||+++++|.+++.. .+++.+++.++.||++||+||| +.||+||||||+||+++.+ .+||+|||++
T Consensus 159 ~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccc
Confidence 6999999999999887754 4889999999999999999999 8899999999999999986 9999999999
Q ss_pred cccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 830 RLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
+..... ....||+.|+|||++.+. ++.++|||||||++|||++|.+||........
T Consensus 229 ~~~~~~-----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~------------------ 284 (681)
T 2pzi_A 229 SRINSF-----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL------------------ 284 (681)
T ss_dssp EETTCC-----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC------------------
T ss_pred hhcccC-----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc------------------
Confidence 865432 345799999999987655 48899999999999999999988754221100
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHHHHhh
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT-MLHVLKFLKEI 956 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~ell~~L~~l 956 (959)
+ ...........+.+++.+||+.||++||+ ++++.+.+.++
T Consensus 285 ----~--~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 285 ----P--EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp ----C--TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ----c--ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 0 00001123356889999999999999995 66666666554
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=312.89 Aligned_cols=259 Identities=29% Similarity=0.477 Sum_probs=227.3
Q ss_pred ccccEEEccCCcCcc--cCCccccCCCCCCEEEccC-CCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcE
Q 002155 317 VVVVDLLLNNNMLSG--KIPGSLSRLTNLTTLDLSR-NQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVK 393 (959)
Q Consensus 317 ~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 393 (959)
..++.|++++|.+++ .+|..|.++++|++|++++ |.+.+..|..|..+++|++|++++|.+++..|..+..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 467788888888887 7788888888888888884 8888788888888888888888888888888888888888888
Q ss_pred EEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhccc-ccceEeeccccccCCccccccchhhhhhceeccCC
Q 002155 394 LNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSN 472 (959)
Q Consensus 394 L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~ 472 (959)
|++++|.+++..|..|..+++|++|++++|++++.+|..+..++ +|+.|++++|++++..+..|... .++.|++++
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l---~L~~L~Ls~ 206 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL---NLAFVDLSR 206 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC---CCSEEECCS
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCC---cccEEECcC
Confidence 88888888888888888888888888888888888888888887 88888888888887766666654 388889999
Q ss_pred cccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCC
Q 002155 473 NLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVP 552 (959)
Q Consensus 473 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 552 (959)
|.+++..|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|++|++++|++++.+|
T Consensus 207 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp SEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred CcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC
Confidence 999888999999999999999999999966655 8899999999999999999999999999999999999999999999
Q ss_pred CCcccCCCccccccCCCCCCCCCCCCCc
Q 002155 553 RSGICQNLSKISLTGNKDLCGKIIGSNC 580 (959)
Q Consensus 553 ~~~~~~~l~~l~l~~N~~~c~~~~~~~c 580 (959)
....+++|+.+++.+|+++||.|+. .|
T Consensus 286 ~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 286 QGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp CSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred CCccccccChHHhcCCCCccCCCCC-CC
Confidence 8888999999999999999998776 46
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=329.06 Aligned_cols=244 Identities=14% Similarity=0.131 Sum_probs=181.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCC-Cceeccccc---------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKH-QNLVPLLGY--------- 743 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h-~niv~~~~~--------- 743 (959)
+.+|...++||+|+||.||+|++. +|+.||||++.... ....+.+.+|+.+++.++| ++......+
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 345777889999999999999954 69999999987332 2235678899999999987 322211111
Q ss_pred ------------eec-----CCceEEEEEeccCCCHHHHHhhh---cCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 002155 744 ------------CSF-----DEEKLLVYEYMVNGSLDLWLRNR---TGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHI 803 (959)
Q Consensus 744 ------------~~~-----~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 803 (959)
+.. ....+++|+++ +++|.++++.. ......+++..++.++.|+++||+||| +.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCc
Confidence 111 12356777765 67999988532 222346788899999999999999999 8899
Q ss_pred EeCCCCCCCEEECCCCcEEEcccccccccccccccccccccccccccCCCcC----------CCCCCCCcCcchhHHHHH
Q 002155 804 IHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG----------QSGRSTTRGDVYSFGVIL 873 (959)
Q Consensus 804 vH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwslG~il 873 (959)
+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 99999999999999999999999998765432 334567 999999988 666688999999999999
Q ss_pred HHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 874 LELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 874 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
|||++|+.||........ .. .+ +.. .. .....+.+++.+||+.||++||++.+++++
T Consensus 308 ~elltg~~Pf~~~~~~~~----~~----~~--------~~~--~~----~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGG----SE----WI--------FRS--CK----NIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHHHSSCCCCTTGGGSC----SG----GG--------GSS--CC----CCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHCCCCCCCcchhhh----HH----HH--------Hhh--cc----cCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 999999999965422110 00 00 000 00 122468899999999999999998888654
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=310.74 Aligned_cols=231 Identities=20% Similarity=0.276 Sum_probs=176.5
Q ss_pred cCCCCC-CeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHH-hcCCCCceeccccceec----CCceE
Q 002155 679 NNFCKT-NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETL-GKVKHQNLVPLLGYCSF----DEEKL 751 (959)
Q Consensus 679 ~~f~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~----~~~~~ 751 (959)
++|.+. ++||+|+||.||+|... +++.||+|++... ..+.+|+.++ +..+||||+++++++.. +...+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456666 78999999999999874 6899999998642 3466788877 56689999999999876 66789
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---CCcEEEccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE---EFEAKVADFGL 828 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~ 828 (959)
+||||+++|+|.+++..... ..+++..++.++.|++.||+||| +.||+||||||+||+++. ++.+||+|||+
T Consensus 92 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~ 166 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF 166 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence 99999999999999987542 35889999999999999999999 889999999999999998 78999999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
+.... +..++.++||||+||++|||++|+.||.......... .......
T Consensus 167 a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~--------~~~~~~~ 215 (299)
T 3m2w_A 167 AKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--------GMKTRIR 215 (299)
T ss_dssp CEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C--------CSCCSSC
T ss_pred ccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH--------HHHHHHh
Confidence 86432 1346778999999999999999999996532211000 0000000
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..... ............+.+++.+||+.||++|||++|++++
T Consensus 216 ~~~~~--~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 216 MGQYE--FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp TTCCS--SCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hcccc--CCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00000 0000001234568889999999999999999999874
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=304.19 Aligned_cols=300 Identities=23% Similarity=0.265 Sum_probs=196.8
Q ss_pred ccCCCcccCCC------ccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccc
Q 002155 31 SGSLPSWLGNW------NQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTG 104 (959)
Q Consensus 31 ~~~lp~~~~~l------~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 104 (959)
.+.+|..++.. .+++.++++++++. .+|..+. ++|++|+|++|++++..|..|.++++|++|++++|++++
T Consensus 16 l~~lp~~~~~~cp~~c~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~ 92 (332)
T 2ft3_A 16 LDSLPPTYSAMCPFGCHCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISK 92 (332)
T ss_dssp ---------CCCCSSCEEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred cccCCCcccCCCCCCCcccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCc
Confidence 34566655443 36889999999887 7787664 689999999999987777889999999999999999998
Q ss_pred cCCcccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEcccccccc--ccCcccc
Q 002155 105 TIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEG--SLPYEVG 182 (959)
Q Consensus 105 ~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~--~~~~~~~ 182 (959)
..+..|.++++|++|++++|.+... |..+. .+|++|++++|++++..+..+..+++|++|++++|.++. ..+..|.
T Consensus 93 ~~~~~~~~l~~L~~L~L~~n~l~~l-~~~~~-~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 170 (332)
T 2ft3_A 93 IHEKAFSPLRKLQKLYISKNHLVEI-PPNLP-SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFD 170 (332)
T ss_dssp ECGGGSTTCTTCCEEECCSSCCCSC-CSSCC-TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSC
T ss_pred cCHhHhhCcCCCCEEECCCCcCCcc-Ccccc-ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCccccc
Confidence 8888899999999999999988743 43333 467888888888876666667777777777777777652 4555666
Q ss_pred CCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCee
Q 002155 183 NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCL 262 (959)
Q Consensus 183 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 262 (959)
.+ +|++|++++|.+++ +|..+. ++|++|++++|.+++..+..+..+++|++|+|++|++++..+..|..+++|++|
T Consensus 171 ~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 246 (332)
T 2ft3_A 171 GL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLREL 246 (332)
T ss_dssp SC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEE
T ss_pred CC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEE
Confidence 66 66666666666663 444433 466666666666665555666666666666666666665555556666666666
Q ss_pred EcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCC
Q 002155 263 VLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTN 342 (959)
Q Consensus 263 ~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~ 342 (959)
+|++|+++ .+|..+..+++
T Consensus 247 ~L~~N~l~-------------------------------------------------------------~lp~~l~~l~~ 265 (332)
T 2ft3_A 247 HLDNNKLS-------------------------------------------------------------RVPAGLPDLKL 265 (332)
T ss_dssp ECCSSCCC-------------------------------------------------------------BCCTTGGGCTT
T ss_pred ECCCCcCe-------------------------------------------------------------ecChhhhcCcc
Confidence 66665543 23334455555
Q ss_pred CCEEEccCCCCCCCCCCCcCC------CCcceEEEeeCcccC--CccccccccCCCCcEEEccCCc
Q 002155 343 LTTLDLSRNQLTGPIPSEFGD------SIKLQGLYLGNNQLT--GSIPWSLGSLGGLVKLNLTGNK 400 (959)
Q Consensus 343 L~~L~Ls~n~l~~~~~~~~~~------l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~L~~N~ 400 (959)
|++|++++|+++...+..|.. ...|+.|++++|.+. +..|..|..+++|+.+++++|+
T Consensus 266 L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 266 LQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 555555555555554444443 245666677776665 4556666777777777776664
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=301.84 Aligned_cols=289 Identities=27% Similarity=0.327 Sum_probs=187.2
Q ss_pred cCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEc
Q 002155 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVL 264 (959)
Q Consensus 185 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 264 (959)
.+++.+++++|.++ .+|..+. ++|++|+|++|.|+++.|..|.++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred ccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 36788888888887 5666653 57888888888888777778888888888888888888887888888888888888
Q ss_pred ccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCC
Q 002155 265 SHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLT 344 (959)
Q Consensus 265 s~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 344 (959)
++|+++. + |..+. ++|++|++++|+++...+..|..+++|+
T Consensus 110 ~~n~l~~-l------------------------------------~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~ 150 (332)
T 2ft3_A 110 SKNHLVE-I------------------------------------PPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMN 150 (332)
T ss_dssp CSSCCCS-C------------------------------------CSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCC
T ss_pred CCCcCCc-c------------------------------------Ccccc--ccCCEEECCCCccCccCHhHhCCCccCC
Confidence 8887751 1 11111 3455555555555555555566666666
Q ss_pred EEEccCCCCCC--CCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCC
Q 002155 345 TLDLSRNQLTG--PIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSF 422 (959)
Q Consensus 345 ~L~Ls~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 422 (959)
+|++++|.++. ..+..|..+ +|+.|++++|++++ +|..+. ++|++|++++|++++..+..|.++++|++|++++
T Consensus 151 ~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~ 226 (332)
T 2ft3_A 151 CIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGH 226 (332)
T ss_dssp EEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCS
T ss_pred EEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCC
Confidence 66666666642 455555555 66666666666663 333332 4666666666666655556666666666666666
Q ss_pred ccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeecccccccc
Q 002155 423 NELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGE 502 (959)
Q Consensus 423 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 502 (959)
|++++..+..+..+++|+.|++++|+++. +|..+..+++|+.|++++|++++.
T Consensus 227 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~---------------------------lp~~l~~l~~L~~L~l~~N~l~~~ 279 (332)
T 2ft3_A 227 NQIRMIENGSLSFLPTLRELHLDNNKLSR---------------------------VPAGLPDLKLLQVVYLHTNNITKV 279 (332)
T ss_dssp SCCCCCCTTGGGGCTTCCEEECCSSCCCB---------------------------CCTTGGGCTTCCEEECCSSCCCBC
T ss_pred CcCCcCChhHhhCCCCCCEEECCCCcCee---------------------------cChhhhcCccCCEEECCCCCCCcc
Confidence 66665555566666666666666665552 334455566666666666666655
Q ss_pred CCcCCcC------CCCCcEEeCCCCcCC--CCCCccccCCCCccEEecccCc
Q 002155 503 IPPDLGN------LMQLEYLDVSRNRLC--GQIPETMCSLSNLLYLSLAENR 546 (959)
Q Consensus 503 ~p~~~~~------l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~l~~N~ 546 (959)
.+..|.. ...|+.|++++|++. +..|..|..+++|+.+++++|+
T Consensus 280 ~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 280 GVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 4444443 245667777777665 4566666677777777776663
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=320.59 Aligned_cols=245 Identities=18% Similarity=0.176 Sum_probs=185.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc--------hhhHHHHHHHHHHHhcCC----------------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK--------TQGHREFTAEMETLGKVK---------------- 733 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------------- 733 (959)
.++|++.+.||+|+||+||+|++ +|+.||||++.... ....+.+.+|+.+++.++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788999999999999999998 68999999987542 223467889999998886
Q ss_pred ----------CCceeccccceec-------------CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHH
Q 002155 734 ----------HQNLVPLLGYCSF-------------DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAAR 790 (959)
Q Consensus 734 ----------h~niv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~ 790 (959)
||||+++++++.. ++..|+||||+++|++.+.+.. ..+++.++..++.||+.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHHH
Confidence 6666666666654 7889999999999977666643 24789999999999999
Q ss_pred HHHHHHhcCCCCeEeCCCCCCCEEECCCC--------------------cEEEccccccccccccccccccccccccccc
Q 002155 791 GLAFLHHGFTPHIIHRDIKASNILLNEEF--------------------EAKVADFGLARLISACETHVSTDIAGTFGYI 850 (959)
Q Consensus 791 ~l~~LH~~~~~~ivH~dlk~~Nill~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~ 850 (959)
||+|||+ +.||+||||||+|||++.++ .+||+|||+|+.... ....||+.|+
T Consensus 173 aL~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------~~~~gt~~y~ 244 (336)
T 2vuw_A 173 SLAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------GIVVFCDVSM 244 (336)
T ss_dssp HHHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------TEEECCCCTT
T ss_pred HHHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC------CcEEEeeccc
Confidence 9999993 36899999999999999887 999999999986642 1347899999
Q ss_pred CCCcCCCCCCCCcCcchhHHHH-HHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHH
Q 002155 851 PPEYGQSGRSTTRGDVYSFGVI-LLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKML 929 (959)
Q Consensus 851 aPE~~~~~~~~~~~DvwslG~i-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 929 (959)
|||++.+.. +.++||||+|++ .+++++|..||... .........+...... ...............+.
T Consensus 245 aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~-------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~ 313 (336)
T 2vuw_A 245 DEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV-------LWLHYLTDKMLKQMTF---KTKCNTPAMKQIKRKIQ 313 (336)
T ss_dssp CSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH-------HHHHHHHHHHHHTCCC---SSCCCSHHHHHHHHHHH
T ss_pred ChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch-------hhhhHHHHhhhhhhcc---CcccchhhhhhcCHHHH
Confidence 999988766 889999998777 77888899987320 0001111111111110 01111112345777899
Q ss_pred HHHHHcccCCCCCCCCHHHHH-HH
Q 002155 930 RIAGDCLSDNPAMRPTMLHVL-KF 952 (959)
Q Consensus 930 ~li~~cl~~dP~~Rps~~ell-~~ 952 (959)
+++.+||+.| |++|++ ++
T Consensus 314 dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 314 EFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHhccC-----CHHHHHhcC
Confidence 9999999977 999998 53
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-32 Score=297.17 Aligned_cols=221 Identities=18% Similarity=0.227 Sum_probs=153.5
Q ss_pred ccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeee
Q 002155 42 NQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVI 121 (959)
Q Consensus 42 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 121 (959)
.+++.++++++.+. .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 36788888888887 6776554 67888999999888766668888889999999999888887888888888888888
Q ss_pred cccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEcccccccc--ccCccccCCcCCceEeccCCcccc
Q 002155 122 FRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEG--SLPYEVGNAAALERLVLTNNMLKG 199 (959)
Q Consensus 122 ~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~L~~n~i~~ 199 (959)
++|.+... |..+. .+|++|++++|++++..+..+.++++|++|++++|.++. ..+..|.++++|++|++++|.++.
T Consensus 108 s~n~l~~l-~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 108 SKNQLKEL-PEKMP-KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp CSSCCSBC-CSSCC-TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCCcCCcc-Chhhc-ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 88888743 33332 357777777777776666666666677777776666642 455566666666666666666663
Q ss_pred cCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCC
Q 002155 200 HLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 200 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
+|..+. ++|++|++++|.+++..|..+..+++|++|+|++|++++..+..|..+++|++|+|++|+++
T Consensus 186 -l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 186 -IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp -CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS
T ss_pred -CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc
Confidence 444333 56666666666666555666666666666666666666555555666666666666665553
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-32 Score=297.62 Aligned_cols=248 Identities=25% Similarity=0.318 Sum_probs=133.3
Q ss_pred cCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEc
Q 002155 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVL 264 (959)
Q Consensus 185 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 264 (959)
.+++.++++++.++ .+|..+. ++|++|+|++|.|+++.+..|.++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 35677777777777 4555543 56777788888777666667777778888888888777777777777788888888
Q ss_pred ccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcc--cCCccccCCCC
Q 002155 265 SHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSG--KIPGSLSRLTN 342 (959)
Q Consensus 265 s~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~--~~~~~~~~l~~ 342 (959)
++|+++. +|.. ...+|+.|++++|.+++..+..+..+++|+.|++++|.++. ..+..|..+++
T Consensus 108 s~n~l~~-l~~~--------------~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~ 172 (330)
T 1xku_A 108 SKNQLKE-LPEK--------------MPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK 172 (330)
T ss_dssp CSSCCSB-CCSS--------------CCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTT
T ss_pred CCCcCCc-cChh--------------hcccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCC
Confidence 7777651 1110 00233444444444443444444445555555555555432 34444555555
Q ss_pred CCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCC
Q 002155 343 LTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSF 422 (959)
Q Consensus 343 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 422 (959)
|++|++++|.++. +|..+. ++|+.|++++|++++..+..+..+++|++|++++|++++..+..|..+++|++|++++
T Consensus 173 L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 249 (330)
T 1xku_A 173 LSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNN 249 (330)
T ss_dssp CCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCS
T ss_pred cCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCC
Confidence 5555555555542 222221 3444444444444444444444444444444444444444444444444444444444
Q ss_pred ccccCCCchhhhcccccceEeeccccccCCcc
Q 002155 423 NELDGQLPSSLSNILNLVGLYLQHNKLSGPVD 454 (959)
Q Consensus 423 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 454 (959)
|+++ .+|..+..+++|+.|++++|+|++++.
T Consensus 250 N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~ 280 (330)
T 1xku_A 250 NKLV-KVPGGLADHKYIQVVYLHNNNISAIGS 280 (330)
T ss_dssp SCCS-SCCTTTTTCSSCCEEECCSSCCCCCCT
T ss_pred CcCc-cCChhhccCCCcCEEECCCCcCCccCh
Confidence 4444 344444444444444444444444433
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=292.26 Aligned_cols=248 Identities=26% Similarity=0.367 Sum_probs=211.8
Q ss_pred ccccEEecCCCcccc--cCCcCccCCCCCcEEEcCC-CcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCce
Q 002155 42 NQMESLLLSSNQFIG--KIPPEIGNCSMLKSISLSN-NFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQ 118 (959)
Q Consensus 42 ~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 118 (959)
.++++|+|++|++.+ .+|+.|+.+++|++|+|++ |.+.+.+|..|..+++|++|+|++|++++..|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578889999999988 8888999999999999995 8888888988999999999999999998888888999999999
Q ss_pred eeecccccccccCcccCCC-cccEEeccCCccccccCccccccc-ceeEEEccccccccccCccccCCcCCceEeccCCc
Q 002155 119 LVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSE-TLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNM 196 (959)
Q Consensus 119 L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 196 (959)
|+|++|.+.+.+|..+..+ +|++|++++|++++.+|..+..++ +|++|++++|.+++.+|..|..++ |++|+|++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 9999999988888877766 488999999999888888888887 889999999999888888888887 9999999999
Q ss_pred ccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCC
Q 002155 197 LKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSK 276 (959)
Q Consensus 197 i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 276 (959)
+++..|..|..+++|++|+|++|.+++.+|. +..+++|++|+|++|++++.+|..|..+++|++|+|++|+++|.+|.
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~- 286 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ- 286 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCC-
Confidence 9888888888999999999999998866554 78888899999999999888888888999999999999988765553
Q ss_pred CcchhhccCCCCccccccccceecCCCc
Q 002155 277 PSSYFRQANMPDLSFIQHHGVFDLSYNR 304 (959)
Q Consensus 277 ~~~~~~~~~~~~l~~l~~L~~l~L~~n~ 304 (959)
...+++|+.+++++|.
T Consensus 287 ------------~~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 287 ------------GGNLQRFDVSAYANNK 302 (313)
T ss_dssp ------------STTGGGSCGGGTCSSS
T ss_pred ------------CccccccChHHhcCCC
Confidence 2345566667777766
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.97 E-value=8.8e-35 Score=336.77 Aligned_cols=360 Identities=19% Similarity=0.173 Sum_probs=215.0
Q ss_pred cccEEecCCCcccccCCcC-ccCCCCCcEEEcCCCcCCC----CCCcccCCCCCCcEEEccCccccccCCccc-ccCCCC
Q 002155 43 QMESLLLSSNQFIGKIPPE-IGNCSMLKSISLSNNFLSG----SIPRELCTSESLEEIDLDGNLLTGTIEGVF-EKCSNL 116 (959)
Q Consensus 43 ~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L 116 (959)
+|++|+|++|++....... +..+++|++|+|++|++++ .++..+..+++|++|+|++|.+++..+..+ ..++.
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~- 82 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT- 82 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS-
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh-
Confidence 4555555555554322222 4455555555555555542 123444445555555555555543222111 11220
Q ss_pred ceeeecccccccccCcccCCCcccEEeccCCcccc----ccCcccccccceeEEEccccccccccCcccc-----CCcCC
Q 002155 117 SQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTG----IIPVSIWNSETLMEFSAANNLLEGSLPYEVG-----NAAAL 187 (959)
Q Consensus 117 ~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~----~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~-----~l~~L 187 (959)
...+|++|++++|++++ .++..+..+++|++|++++|.+++..+..+. ..++|
T Consensus 83 ------------------~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L 144 (461)
T 1z7x_W 83 ------------------PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRL 144 (461)
T ss_dssp ------------------TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCC
T ss_pred ------------------CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcc
Confidence 00025555555555553 3355556666666666666666543333332 24567
Q ss_pred ceEeccCCcccccC----CccccCCCCCCEEEccCCcCCccCCccccC-----CCCCCEEEcccccCCCC----Cchhhh
Q 002155 188 ERLVLTNNMLKGHL----PKEIGNLSALSVLDLNSNLFDGIIPYELGD-----CISLTTLDLGNNNLSGL----IPEKIA 254 (959)
Q Consensus 188 ~~L~L~~n~i~~~~----~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~-----l~~L~~L~L~~N~l~~~----~~~~~~ 254 (959)
++|+|++|.+++.. +..+..+++|++|++++|.++...+..+.. +++|++|+|++|.++.. ++..+.
T Consensus 145 ~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~ 224 (461)
T 1z7x_W 145 EKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVA 224 (461)
T ss_dssp CEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHH
T ss_pred eEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHH
Confidence 77777777776532 455566677777777777776544444432 45777777777777753 355666
Q ss_pred cccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCccc--
Q 002155 255 DLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGK-- 332 (959)
Q Consensus 255 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~-- 332 (959)
.+++|++|++++|.++... +.. ..+..+..+++|+.|++++|.++..
T Consensus 225 ~~~~L~~L~Ls~n~l~~~~------------~~~-------------------l~~~~~~~~~~L~~L~L~~n~l~~~~~ 273 (461)
T 1z7x_W 225 SKASLRELALGSNKLGDVG------------MAE-------------------LCPGLLHPSSRLRTLWIWECGITAKGC 273 (461)
T ss_dssp HCTTCCEEECCSSBCHHHH------------HHH-------------------HHHHHTSTTCCCCEEECTTSCCCHHHH
T ss_pred hCCCccEEeccCCcCChHH------------HHH-------------------HHHHHhcCCCCceEEECcCCCCCHHHH
Confidence 7777777777777664100 000 0011122345666677777766643
Q ss_pred --CCccccCCCCCCEEEccCCCCCCCCCCCcC-----CCCcceEEEeeCcccCCc----cccccccCCCCcEEEccCCcC
Q 002155 333 --IPGSLSRLTNLTTLDLSRNQLTGPIPSEFG-----DSIKLQGLYLGNNQLTGS----IPWSLGSLGGLVKLNLTGNKL 401 (959)
Q Consensus 333 --~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-----~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~i 401 (959)
++..+..+++|++|++++|.++...+..+. ..++|+.|++++|.+++. ++..+..+++|++|++++|++
T Consensus 274 ~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i 353 (461)
T 1z7x_W 274 GDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRL 353 (461)
T ss_dssp HHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBC
T ss_pred HHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcc
Confidence 455666778888888888877643222222 235788888888888754 455667778899999999988
Q ss_pred CCCCCCccCC-----cccccccccCCccccC----CCchhhhcccccceEeeccccccCC
Q 002155 402 SGKVPTSFGN-----LKELTHLDLSFNELDG----QLPSSLSNILNLVGLYLQHNKLSGP 452 (959)
Q Consensus 402 ~~~~~~~~~~-----l~~L~~L~L~~N~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~ 452 (959)
++..+..+.. .++|++|++++|++++ .+|..+..+++|++|++++|++++.
T Consensus 354 ~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 354 EDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp HHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred ccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 7654444432 5689999999999885 6778888899999999999988754
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-34 Score=332.57 Aligned_cols=235 Identities=18% Similarity=0.168 Sum_probs=165.2
Q ss_pred cccCCCccccEEecCCCcccc----cCCcCccCCCCCcEEEcCCCcCCCCCCccc-CCCC----CCcEEEccCccccc--
Q 002155 36 SWLGNWNQMESLLLSSNQFIG----KIPPEIGNCSMLKSISLSNNFLSGSIPREL-CTSE----SLEEIDLDGNLLTG-- 104 (959)
Q Consensus 36 ~~~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~-~~l~----~L~~L~L~~n~l~~-- 104 (959)
..+..++.|++|+|++|++.. .++..+..+++|++|+|++|++++..+..+ ..++ +|++|+|++|+++.
T Consensus 22 ~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~ 101 (461)
T 1z7x_W 22 ELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAG 101 (461)
T ss_dssp HHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGG
T ss_pred HHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHH
Confidence 337788999999999999874 457778899999999999999986444333 2355 79999999999994
Q ss_pred --cCCcccccCCCCceeeecccccccccCcccC------CCcccEEeccCCcccccc----CcccccccceeEEEccccc
Q 002155 105 --TIEGVFEKCSNLSQLVIFRNHIYGSIPEYLS------KLPLMVLDLDSNNFTGII----PVSIWNSETLMEFSAANNL 172 (959)
Q Consensus 105 --~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~------~~~L~~L~ls~n~l~~~~----p~~~~~~~~L~~L~l~~n~ 172 (959)
.++..|..+++|++|+|++|.+.+..+..+. ..+|++|++++|++++.. +..+..+++|++|++++|.
T Consensus 102 ~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~ 181 (461)
T 1z7x_W 102 CGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNND 181 (461)
T ss_dssp HHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSB
T ss_pred HHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCC
Confidence 4588899999999999999998755443322 125888888888888644 4445556777777777777
Q ss_pred cccccCccccC-----CcCCceEeccCCccccc----CCccccCCCCCCEEEccCCcCCccC-----CccccCCCCCCEE
Q 002155 173 LEGSLPYEVGN-----AAALERLVLTNNMLKGH----LPKEIGNLSALSVLDLNSNLFDGII-----PYELGDCISLTTL 238 (959)
Q Consensus 173 l~~~~~~~~~~-----l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~N~i~~~~-----~~~~~~l~~L~~L 238 (959)
+++..+..+.. .++|++|+|++|.+++. ++..+..+++|++|++++|.++... +..+..+++|++|
T Consensus 182 i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L 261 (461)
T 1z7x_W 182 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTL 261 (461)
T ss_dssp CHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEE
T ss_pred cchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEE
Confidence 76544444432 45777777777777642 3556666777777777777765432 2222346677777
Q ss_pred EcccccCCCC----CchhhhcccCCCeeEcccccCC
Q 002155 239 DLGNNNLSGL----IPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 239 ~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
++++|+++.. ++..+..+++|++|+|++|.++
T Consensus 262 ~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 297 (461)
T 1z7x_W 262 WIWECGITAKGCGDLCRVLRAKESLKELSLAGNELG 297 (461)
T ss_dssp ECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCH
T ss_pred ECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCc
Confidence 7777776643 3555566667777777766653
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=280.77 Aligned_cols=193 Identities=23% Similarity=0.189 Sum_probs=109.9
Q ss_pred ccCCCCCCEEEccCCCCCCCCC-CCcCCCCcceEEEeeCc-ccCCccccccccCCCCcEEEccCCcCCCCCCCccCCccc
Q 002155 337 LSRLTNLTTLDLSRNQLTGPIP-SEFGDSIKLQGLYLGNN-QLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKE 414 (959)
Q Consensus 337 ~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 414 (959)
|..+++|++|++++|+++...+ ..|..+++|+.|++++| .++...+..+..+++|++|++++|++++..|..|.++++
T Consensus 120 ~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~ 199 (353)
T 2z80_A 120 FKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQN 199 (353)
T ss_dssp HTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSE
T ss_pred hCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhcccc
Confidence 3444444444444444443222 24444555555555554 244333445555555555555556555555666666666
Q ss_pred ccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeee
Q 002155 415 LTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDL 494 (959)
Q Consensus 415 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~L 494 (959)
|++|++++|+++...+..+..+++|+.|++++|++++.+...+.. ......++.++|
T Consensus 200 L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~-----------------------~~~~~~l~~l~L 256 (353)
T 2z80_A 200 VSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST-----------------------GETNSLIKKFTF 256 (353)
T ss_dssp EEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC-----------------------------CCCCCCEEEE
T ss_pred CCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc-----------------------ccccchhhcccc
Confidence 777777777765333333445677777777777777654332211 112334455555
Q ss_pred ccccccc----cCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCC
Q 002155 495 HENKFTG----EIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVP 552 (959)
Q Consensus 495 s~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 552 (959)
++|.+++ .+|..+..+++|++|++++|+|++..+..|..+++|++|++++|++.+.+|
T Consensus 257 ~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 257 RNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp ESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 5555543 466777788888888888888874433345777888888777777766554
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=280.48 Aligned_cols=247 Identities=24% Similarity=0.231 Sum_probs=177.8
Q ss_pred ceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcc
Q 002155 297 VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQ 376 (959)
Q Consensus 297 ~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 376 (959)
.++.+++.++ .+|..+. +.++.|+|++|+|+.+.+..|.++++|++|+|++|.++.+.+..|.++++|++|+|++|+
T Consensus 47 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 47 KVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 3555555555 3444443 456666677777666666666677777777777777666666666666677777777776
Q ss_pred cCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCC-ccccCCCchhhhcccccceEeeccccccCCccc
Q 002155 377 LTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSF-NELDGQLPSSLSNILNLVGLYLQHNKLSGPVDE 455 (959)
Q Consensus 377 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 455 (959)
++...+..|..+++|++|+|++|+|+...+..|.++++|++|++++ |.+....+..|.++++|+.|++++|+++.+
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~--- 200 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI--- 200 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC---
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc---
Confidence 6655555666666777777777776665556666666777777766 334433344566666666666666666533
Q ss_pred cccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCC
Q 002155 456 LFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLS 535 (959)
Q Consensus 456 ~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 535 (959)
| .+..+++|+.|+|++|++++..|..|.++++|++|+|++|+|++..+..|..++
T Consensus 201 ------------------------~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 255 (440)
T 3zyj_A 201 ------------------------P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ 255 (440)
T ss_dssp ------------------------C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCT
T ss_pred ------------------------c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCC
Confidence 2 356678899999999999988888999999999999999999988888899999
Q ss_pred CccEEecccCcCcccCCCC-cccCCCccccccCCCCCCCC
Q 002155 536 NLLYLSLAENRLEGMVPRS-GICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 536 ~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~~ 574 (959)
+|++|+|++|+++++++.. ..+.+|+.+++.+|||.|+|
T Consensus 256 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 256 SLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp TCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred CCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCC
Confidence 9999999999999888765 45788999999999999965
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-29 Score=275.22 Aligned_cols=275 Identities=20% Similarity=0.199 Sum_probs=165.5
Q ss_pred EecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeeccccc
Q 002155 47 LLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHI 126 (959)
Q Consensus 47 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~ 126 (959)
.+++++++. .+|..+. ++|++|+|++|++++..+..|..+++|++|++++|++++..+..|.++++|
T Consensus 36 c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L---------- 102 (353)
T 2z80_A 36 CKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSL---------- 102 (353)
T ss_dssp EECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTC----------
T ss_pred eeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCC----------
Confidence 455555544 4444333 245555555555554333345555555555555555554444444444444
Q ss_pred ccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccC-ccccCCcCCceEeccCC-cccccCCcc
Q 002155 127 YGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLP-YEVGNAAALERLVLTNN-MLKGHLPKE 204 (959)
Q Consensus 127 ~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~n-~i~~~~~~~ 204 (959)
++|++++|++++..+..+.++++|++|++++|.++...+ ..|.++++|++|++++| .++...+..
T Consensus 103 -------------~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 169 (353)
T 2z80_A 103 -------------EHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKD 169 (353)
T ss_dssp -------------CEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTT
T ss_pred -------------CEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHH
Confidence 444555555554444445566666666666666663322 36777788888888877 466666677
Q ss_pred ccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhcc
Q 002155 205 IGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQA 284 (959)
Q Consensus 205 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 284 (959)
|.++++|++|++++|.+++..|..+..+++|++|++++|+++...+..+..+++|+.|++++|++++..+..
T Consensus 170 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~-------- 241 (353)
T 2z80_A 170 FAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSE-------- 241 (353)
T ss_dssp TTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC---------
T ss_pred ccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccc--------
Confidence 888888888888888888777888888888888888888887654455566788888888888876432210
Q ss_pred CCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcc----cCCccccCCCCCCEEEccCCCCCCCCCCC
Q 002155 285 NMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSG----KIPGSLSRLTNLTTLDLSRNQLTGPIPSE 360 (959)
Q Consensus 285 ~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~----~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 360 (959)
+.. ......++.+++.++.+++ .+|..+..+++|++|++++|+++.+.+..
T Consensus 242 -l~~------------------------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~ 296 (353)
T 2z80_A 242 -LST------------------------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGI 296 (353)
T ss_dssp ------------------------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTT
T ss_pred -ccc------------------------ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHH
Confidence 000 0112233444444444433 34566777778888888888777544444
Q ss_pred cCCCCcceEEEeeCcccCCc
Q 002155 361 FGDSIKLQGLYLGNNQLTGS 380 (959)
Q Consensus 361 ~~~l~~L~~L~L~~n~l~~~ 380 (959)
|..+++|++|++++|++.+.
T Consensus 297 ~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 297 FDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp TTTCTTCCEEECCSSCBCCC
T ss_pred HhcCCCCCEEEeeCCCccCc
Confidence 56667777777777766643
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-28 Score=280.29 Aligned_cols=247 Identities=23% Similarity=0.206 Sum_probs=184.3
Q ss_pred ceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcc
Q 002155 297 VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQ 376 (959)
Q Consensus 297 ~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 376 (959)
.++.+++.++ .+|..+. +.++.|+|++|+|+++.+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 58 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 58 KVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 4555555555 3444443 467777777777777777777777777777777777777777777777777777777777
Q ss_pred cCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCC-ccccCCCchhhhcccccceEeeccccccCCccc
Q 002155 377 LTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSF-NELDGQLPSSLSNILNLVGLYLQHNKLSGPVDE 455 (959)
Q Consensus 377 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 455 (959)
++...+..|..+++|++|+|++|+++.+.+..|.++++|++|++++ |.+....+..|..+++|+.|++++|++++++
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~-- 212 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP-- 212 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCC--
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccc--
Confidence 7766666677777777777777777766666777777777777777 4454444456777777777777777766432
Q ss_pred cccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCC
Q 002155 456 LFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLS 535 (959)
Q Consensus 456 ~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 535 (959)
.+..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|..++
T Consensus 213 --------------------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 266 (452)
T 3zyi_A 213 --------------------------NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLA 266 (452)
T ss_dssp --------------------------CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred --------------------------cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCC
Confidence 245677888888888888877788888888888888888888888888888888
Q ss_pred CccEEecccCcCcccCCCC-cccCCCccccccCCCCCCCC
Q 002155 536 NLLYLSLAENRLEGMVPRS-GICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 536 ~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~~ 574 (959)
+|+.|+|++|+|+++++.. ..+.+|+.+++.+|||.|+|
T Consensus 267 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 267 SLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp TCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred CCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 8888888888888877765 44678888999999999965
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-27 Score=262.75 Aligned_cols=225 Identities=21% Similarity=0.211 Sum_probs=205.0
Q ss_pred CccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceee
Q 002155 41 WNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120 (959)
Q Consensus 41 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 120 (959)
.+++++|+|++|++. .+|+.++.+++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..|.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 478999999999998 89999999999999999999999 89999999999999999999999 6688899999999999
Q ss_pred ecccccccccCcccC----------CCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceE
Q 002155 121 IFRNHIYGSIPEYLS----------KLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERL 190 (959)
Q Consensus 121 L~~n~~~~~~p~~~~----------~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 190 (959)
|++|.+.+.+|..+. ..+|++|++++|+++ .+|..+..+++|++|++++|.++ .+|..++.+++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEE
Confidence 999999989988775 346999999999998 77888999999999999999998 567789999999999
Q ss_pred eccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCC
Q 002155 191 VLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 191 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
+|++|.+.+.+|..|.++++|++|+|++|.+.+.+|..+.++++|++|+|++|++.+.+|+.+..+++|+.+++..+.+.
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 99999998899999999999999999999888889999999999999999999998899999999999999999887664
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.3e-28 Score=259.66 Aligned_cols=224 Identities=24% Similarity=0.204 Sum_probs=186.3
Q ss_pred cEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeeccc
Q 002155 45 ESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRN 124 (959)
Q Consensus 45 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 124 (959)
+.++.+++++. .+|..+ .++|++|+|++|++++..+..|..+++|++|++++|.++++.+..|.++++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 56777777776 666543 467888888888888666677888888888888888888777778888888888888888
Q ss_pred c-cccccCcccCCC-cccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCC
Q 002155 125 H-IYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLP 202 (959)
Q Consensus 125 ~-~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 202 (959)
. +....|..+..+ +|++|++++|++++..|..+.++++|++|++++|.+++..+..|..+++|++|+|++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 6 666666666665 48888888888888878888888899999999998886666778899999999999999997777
Q ss_pred ccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCC
Q 002155 203 KEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSG 271 (959)
Q Consensus 203 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 271 (959)
..|.++++|++|+|++|.+++..|..|..+++|++|++++|++++..+..|..+++|+.|++++|.+.+
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 789999999999999999998889999999999999999999998877889999999999999998864
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-28 Score=264.95 Aligned_cols=242 Identities=21% Similarity=0.191 Sum_probs=190.0
Q ss_pred cCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCC--CCcccCCCCCCcEEEccCccccc
Q 002155 27 KNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGS--IPRELCTSESLEEIDLDGNLLTG 104 (959)
Q Consensus 27 ~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~--~p~~~~~l~~L~~L~L~~n~l~~ 104 (959)
.++-.+.+|..+. +.|++|+|++|++....+..|..+++|++|+|++|+++.. .|..+..+++|++|++++|.++.
T Consensus 15 ~~~~l~~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~ 92 (306)
T 2z66_A 15 NSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT 92 (306)
T ss_dssp CSSCCSSCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEE
T ss_pred CCCCcccCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCcccc
Confidence 3444556776554 5788888888888743334478888888888888888732 25667778888888888888884
Q ss_pred cCCcccccCCCCceeeecccccccccC-cccCCC-cccEEeccCCccccccCcccccccceeEEEcccccccc-ccCccc
Q 002155 105 TIEGVFEKCSNLSQLVIFRNHIYGSIP-EYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEG-SLPYEV 181 (959)
Q Consensus 105 ~~~~~~~~l~~L~~L~L~~n~~~~~~p-~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~-~~~~~~ 181 (959)
.+..|..+++|++|++++|.+.+..+ ..+..+ +|++|++++|++.+..+..+..+++|++|++++|.+++ ..|..|
T Consensus 93 -l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 171 (306)
T 2z66_A 93 -MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIF 171 (306)
T ss_dssp -EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCC
T ss_pred -ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHH
Confidence 45568888888888888888876655 445554 58888888888888888888888888888888888876 577888
Q ss_pred cCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhccc-CCC
Q 002155 182 GNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLA-QLQ 260 (959)
Q Consensus 182 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~ 260 (959)
..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..+..+..+++|++|+|++|++++..|..+..++ +|+
T Consensus 172 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~ 251 (306)
T 2z66_A 172 TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLA 251 (306)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCC
T ss_pred hhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCC
Confidence 8888888888888888877788888888888888888888877777788888888888888888888888888874 888
Q ss_pred eeEcccccCCC
Q 002155 261 CLVLSHNNLSG 271 (959)
Q Consensus 261 ~L~Ls~N~l~~ 271 (959)
.|+|++|.+++
T Consensus 252 ~L~L~~N~~~~ 262 (306)
T 2z66_A 252 FLNLTQNDFAC 262 (306)
T ss_dssp EEECTTCCEEC
T ss_pred EEEccCCCeec
Confidence 88888888864
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.2e-28 Score=263.30 Aligned_cols=135 Identities=23% Similarity=0.259 Sum_probs=68.0
Q ss_pred ccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCC-CCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEE
Q 002155 317 VVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTG-PIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLN 395 (959)
Q Consensus 317 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 395 (959)
++|+.|++++|.+++..+..|..+++|++|++++|.+.+ ..|..|..+++|+.|++++|++++..|..+..+++|++|+
T Consensus 126 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 205 (306)
T 2z66_A 126 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 205 (306)
T ss_dssp TTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEE
Confidence 333333333333333444444444455555555554443 2344445555555555555555544444555555555555
Q ss_pred ccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhccc-ccceEeeccccccC
Q 002155 396 LTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVGLYLQHNKLSG 451 (959)
Q Consensus 396 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~ 451 (959)
+++|++++..+..|..+++|++|++++|++++..|..+..++ +|+.|++++|+++.
T Consensus 206 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 206 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 555555544444555555555555555555555555555553 55555666555554
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-27 Score=271.63 Aligned_cols=239 Identities=22% Similarity=0.191 Sum_probs=144.4
Q ss_pred CCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCC
Q 002155 28 NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIE 107 (959)
Q Consensus 28 ~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~ 107 (959)
++-.+.+|..+. +.++.|+|++|++.+..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+++.+.+
T Consensus 52 ~~~l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 129 (440)
T 3zyj_A 52 RKNLREVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPN 129 (440)
T ss_dssp SCCCSSCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCT
T ss_pred CCCcCcCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCH
Confidence 344445555544 356666666666665555566666666666666666665555566666666666666666665555
Q ss_pred cccccCCCCceeeecccccccccCcccCCC-cccEEeccCC-ccccccCcccccccceeEEEccccccccccCccccCCc
Q 002155 108 GVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSN-NFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAA 185 (959)
Q Consensus 108 ~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n-~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 185 (959)
+.|..+++|++|+|++|.+....+..+..+ +|++|++++| .+..+.+..|.++++|++|++++|.++ .+| .+..++
T Consensus 130 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~ 207 (440)
T 3zyj_A 130 GAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLI 207 (440)
T ss_dssp TTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCS
T ss_pred hHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCc
Confidence 566666666666666666665555555544 3666666663 333333345666666666666666665 333 355666
Q ss_pred CCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcc
Q 002155 186 ALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLS 265 (959)
Q Consensus 186 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 265 (959)
+|++|+|++|.|++..|..|.++++|+.|+|++|.|+.+.+..|.++++|++|+|++|+++.+.+..|..+++|+.|+|+
T Consensus 208 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 287 (440)
T 3zyj_A 208 KLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLH 287 (440)
T ss_dssp SCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECC
T ss_pred ccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcC
Confidence 66666666666665556666666666666666666666666666666666666666666666555556666666666666
Q ss_pred cccCC
Q 002155 266 HNNLS 270 (959)
Q Consensus 266 ~N~l~ 270 (959)
+|.+.
T Consensus 288 ~Np~~ 292 (440)
T 3zyj_A 288 HNPWN 292 (440)
T ss_dssp SSCEE
T ss_pred CCCcc
Confidence 66554
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-30 Score=311.92 Aligned_cols=404 Identities=16% Similarity=0.109 Sum_probs=282.8
Q ss_pred cccCCCccccEEecCCCccc---ccCCcCcc------------CCCCCcEEEcCCCcCCCCCCcccCCC--CCCcEEEcc
Q 002155 36 SWLGNWNQMESLLLSSNQFI---GKIPPEIG------------NCSMLKSISLSNNFLSGSIPRELCTS--ESLEEIDLD 98 (959)
Q Consensus 36 ~~~~~l~~L~~L~L~~n~l~---~~~~~~~~------------~l~~L~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~L~ 98 (959)
..+..++.|++|+|+++... +.+|..++ .+++|++|+|++|.+++..+..+... .+|++|+|+
T Consensus 67 ~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~ 146 (592)
T 3ogk_B 67 RLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLD 146 (592)
T ss_dssp HHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEE
T ss_pred HHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECc
Confidence 33456778999999875431 34454444 68889999999998876666666553 459999998
Q ss_pred Ccc-ccc-cCCcccccCCCCceeeecccccccccCc----ccCC-CcccEEeccCCccc----cccCcccccccceeEEE
Q 002155 99 GNL-LTG-TIEGVFEKCSNLSQLVIFRNHIYGSIPE----YLSK-LPLMVLDLDSNNFT----GIIPVSIWNSETLMEFS 167 (959)
Q Consensus 99 ~n~-l~~-~~~~~~~~l~~L~~L~L~~n~~~~~~p~----~~~~-~~L~~L~ls~n~l~----~~~p~~~~~~~~L~~L~ 167 (959)
+|. ++. ..+.....+++|++|+|++|.+.+..+. .... .+|++|++++|+++ +.++..+.++++|++|+
T Consensus 147 ~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~ 226 (592)
T 3ogk_B 147 KCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVK 226 (592)
T ss_dssp SCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEE
T ss_pred CCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEe
Confidence 887 221 1223345789999999999987655322 2222 35889999999887 34455566788999999
Q ss_pred ccccccccccCccccCCcCCceEeccCCccc---ccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEccccc
Q 002155 168 AANNLLEGSLPYEVGNAAALERLVLTNNMLK---GHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNN 244 (959)
Q Consensus 168 l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~---~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 244 (959)
+++|.+.+ +|..+.++++|++|+++.+... ...+..+..+++|+.|+++++... .+|..+..+++|++|+|++|.
T Consensus 227 L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~ 304 (592)
T 3ogk_B 227 VGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYAL 304 (592)
T ss_dssp CSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCC
T ss_pred ccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCc
Confidence 99998884 6788889999999999864433 244567788889999999887554 677778888899999999998
Q ss_pred CCCCCc-hhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCC-ccccccccceecC-----------CCcCCCC-CC
Q 002155 245 LSGLIP-EKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPD-LSFIQHHGVFDLS-----------YNRLSGP-IP 310 (959)
Q Consensus 245 l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~-l~~l~~L~~l~L~-----------~n~l~~~-~p 310 (959)
+++... ..+..+++|++|+++ +.+.. ..++. ...+++|+.|+++ .|.+++. ++
T Consensus 305 l~~~~~~~~~~~~~~L~~L~L~-~~~~~------------~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~ 371 (592)
T 3ogk_B 305 LETEDHCTLIQKCPNLEVLETR-NVIGD------------RGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLI 371 (592)
T ss_dssp CCHHHHHHHHTTCTTCCEEEEE-GGGHH------------HHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHH
T ss_pred CCHHHHHHHHHhCcCCCEEecc-CccCH------------HHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHH
Confidence 764433 346788999999998 43321 11111 1345678888888 3555532 22
Q ss_pred cccCCcccccEEEccCCcCcccCCccccC-CCCCCEEEcc----CCCCCCC-----CCCCcCCCCcceEEEeeCcc--cC
Q 002155 311 EELGSCVVVVDLLLNNNMLSGKIPGSLSR-LTNLTTLDLS----RNQLTGP-----IPSEFGDSIKLQGLYLGNNQ--LT 378 (959)
Q Consensus 311 ~~~~~~~~L~~L~L~~n~i~~~~~~~~~~-l~~L~~L~Ls----~n~l~~~-----~~~~~~~l~~L~~L~L~~n~--l~ 378 (959)
.....+++|+.|++..|.+++..+..+.. +++|+.|+++ .|.+++. .+..+.++++|+.|++++|. ++
T Consensus 372 ~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~ 451 (592)
T 3ogk_B 372 ALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLT 451 (592)
T ss_dssp HHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCC
T ss_pred HHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCcc
Confidence 22345788999999888888776666655 8889999996 5667643 12225567889999997543 65
Q ss_pred Cccccccc-cCCCCcEEEccCCcCCCC-CCCccCCcccccccccCCccccCC-CchhhhcccccceEeeccccccCCcc
Q 002155 379 GSIPWSLG-SLGGLVKLNLTGNKLSGK-VPTSFGNLKELTHLDLSFNELDGQ-LPSSLSNILNLVGLYLQHNKLSGPVD 454 (959)
Q Consensus 379 ~~~~~~~~-~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~L~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~~ 454 (959)
+..+..+. .+++|++|++++|++++. .+..+.++++|++|++++|.+++. ++..+..+++|+.|++++|+++....
T Consensus 452 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~ 530 (592)
T 3ogk_B 452 DLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQ 530 (592)
T ss_dssp HHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCT
T ss_pred HHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHH
Confidence 54444443 478899999999988752 344557788899999999987643 34445678889999999998876543
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-27 Score=271.87 Aligned_cols=235 Identities=23% Similarity=0.206 Sum_probs=118.9
Q ss_pred cCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccc
Q 002155 32 GSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFE 111 (959)
Q Consensus 32 ~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 111 (959)
+.+|..+. +.+++|+|++|++.+..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++.+++..|.
T Consensus 67 ~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 144 (452)
T 3zyi_A 67 SEVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFE 144 (452)
T ss_dssp SSCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSS
T ss_pred CccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhc
Confidence 34444333 3455555555555544455555555555555555555544445555555555555555555554455555
Q ss_pred cCCCCceeeecccccccccCcccCCC-cccEEeccC-CccccccCcccccccceeEEEccccccccccCccccCCcCCce
Q 002155 112 KCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDS-NNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALER 189 (959)
Q Consensus 112 ~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~-n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 189 (959)
.+++|++|+|++|.+....+..+..+ +|++|++++ |.+..+.+..|.++++|+.|++++|.+++ +| .+..+++|++
T Consensus 145 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~ 222 (452)
T 3zyi_A 145 YLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEE 222 (452)
T ss_dssp SCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCE
T ss_pred ccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccE
Confidence 55555555555555554444444443 255555555 22333333344555555555555555542 22 3445555555
Q ss_pred EeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccC
Q 002155 190 LVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNL 269 (959)
Q Consensus 190 L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 269 (959)
|+|++|.|++..|..|.++++|++|+|++|.++++.+..|.++++|++|+|++|+++.+.+..|..+++|+.|+|++|.+
T Consensus 223 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 302 (452)
T 3zyi_A 223 LEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPW 302 (452)
T ss_dssp EECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCE
T ss_pred EECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCc
Confidence 55555555544455555555555555555555555455555555555555555555544444455555555555555544
Q ss_pred C
Q 002155 270 S 270 (959)
Q Consensus 270 ~ 270 (959)
.
T Consensus 303 ~ 303 (452)
T 3zyi_A 303 N 303 (452)
T ss_dssp E
T ss_pred C
Confidence 3
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-27 Score=255.29 Aligned_cols=250 Identities=25% Similarity=0.259 Sum_probs=126.3
Q ss_pred cCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEccccc-CCCCCchhhhcccCCCeeE
Q 002155 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNN-LSGLIPEKIADLAQLQCLV 263 (959)
Q Consensus 185 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~ 263 (959)
++|++|+|++|.|++..+..|..+++|++|+|++|.++++.|..|..+++|++|+|++|+ ++...+..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 344555555555554444445555555555555555554444445555555555555554 4444444444444444444
Q ss_pred cccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCC
Q 002155 264 LSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNL 343 (959)
Q Consensus 264 Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L 343 (959)
+++|.++ +..+..|..+++|
T Consensus 112 l~~n~l~------------------------------------------------------------~~~~~~~~~l~~L 131 (285)
T 1ozn_A 112 LDRCGLQ------------------------------------------------------------ELGPGLFRGLAAL 131 (285)
T ss_dssp CTTSCCC------------------------------------------------------------CCCTTTTTTCTTC
T ss_pred CCCCcCC------------------------------------------------------------EECHhHhhCCcCC
Confidence 4444432 2333344444555
Q ss_pred CEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCc
Q 002155 344 TTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN 423 (959)
Q Consensus 344 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 423 (959)
++|++++|+++...+..|..+++|+.|++++|++++..+..+..+++|++|++++|++++..|..|.++++|++|++++|
T Consensus 132 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 211 (285)
T 1ozn_A 132 QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211 (285)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCC
Confidence 55555555555444444555555555555555555444444555555555555555555555555555566666666666
Q ss_pred cccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccC--ccccceeeeccc
Q 002155 424 ELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGN--LSYLTNLDLHEN 497 (959)
Q Consensus 424 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~--l~~L~~L~Ls~N 497 (959)
++++..+..+..+++|+.|++++|++....+... . ...++.+..+.+.+....|..+.+ +..++..++.+|
T Consensus 212 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~--~-~~~l~~~~~~~~~~~c~~p~~l~g~~l~~l~~~~l~~C 284 (285)
T 1ozn_A 212 NLSALPTEALAPLRALQYLRLNDNPWVCDCRARP--L-WAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQGC 284 (285)
T ss_dssp CCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHH--H-HHHHHHCCSEECCCBEEESGGGTTCBGGGSCGGGSCCC
T ss_pred cCCcCCHHHcccCcccCEEeccCCCccCCCCcHH--H-HHHHHhcccccCccccCCchHhCCcChhhcCHHHhccC
Confidence 6655444555666666666666666553222110 0 012344445556666566666543 445555555444
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-30 Score=308.73 Aligned_cols=252 Identities=15% Similarity=0.125 Sum_probs=113.1
Q ss_pred CCcCCceEeccCCccccc----CCccccCCCCCCEEEccCCcCCc----cCCccccCCCCCCEEEcccccCCCCCchhhh
Q 002155 183 NAAALERLVLTNNMLKGH----LPKEIGNLSALSVLDLNSNLFDG----IIPYELGDCISLTTLDLGNNNLSGLIPEKIA 254 (959)
Q Consensus 183 ~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~N~i~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 254 (959)
++++|++|+|++|.+++. ++..+..+++|++|++++|.+++ .++..+.++++|++|+|++|.+.+ ++..+.
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~ 240 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFK 240 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHh
Confidence 455555666665555443 22233455666666666666652 233334456666666666666654 356666
Q ss_pred cccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCC
Q 002155 255 DLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIP 334 (959)
Q Consensus 255 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~ 334 (959)
.+++|++|+++++......+ .....+..+.+|+.++++++.. ..+|..+..+++|++|++++|.+++...
T Consensus 241 ~~~~L~~L~l~~~~~~~~~~---------~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~ 310 (592)
T 3ogk_B 241 AAANLEEFCGGSLNEDIGMP---------EKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDH 310 (592)
T ss_dssp HCTTCCEEEECBCCCCTTCT---------TSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHH
T ss_pred hhhHHHhhcccccccccchH---------HHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHH
Confidence 66666666666422110000 0111222333444444444321 2344444445555555555555433222
Q ss_pred -ccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEee-----------CcccCCccc-cccccCCCCcEEEccCCcC
Q 002155 335 -GSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLG-----------NNQLTGSIP-WSLGSLGGLVKLNLTGNKL 401 (959)
Q Consensus 335 -~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~-----------~n~l~~~~~-~~~~~l~~L~~L~L~~N~i 401 (959)
..+..+++|++|+++++-.....+..+..+++|++|+++ .|.+++... ..+..+++|++|+++.|.+
T Consensus 311 ~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l 390 (592)
T 3ogk_B 311 CTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDI 390 (592)
T ss_dssp HHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCC
T ss_pred HHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCc
Confidence 223445555555555221111111122334445555555 233332211 1123345555555555555
Q ss_pred CCCCCCccCC-cccccccccC----CccccCC-----CchhhhcccccceEeec
Q 002155 402 SGKVPTSFGN-LKELTHLDLS----FNELDGQ-----LPSSLSNILNLVGLYLQ 445 (959)
Q Consensus 402 ~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~~~~l~~l~~L~~L~L~ 445 (959)
++..+..+.. +++|++|+++ .|.+++. ++..+..+++|+.|+++
T Consensus 391 ~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~ 444 (592)
T 3ogk_B 391 TNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFY 444 (592)
T ss_dssp CHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred cHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEe
Confidence 4433333333 4455555553 4444432 22224445555555554
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.2e-27 Score=255.95 Aligned_cols=238 Identities=21% Similarity=0.224 Sum_probs=194.9
Q ss_pred CcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeE
Q 002155 184 AAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLV 263 (959)
Q Consensus 184 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 263 (959)
.+.++.|+|++|.++ .+|..+.++++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..|..+++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 477888999999888 67888888999999999999988 78888888999999999999988 5588899999999999
Q ss_pred cccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCC
Q 002155 264 LSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNL 343 (959)
Q Consensus 264 Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L 343 (959)
|++|.+.+.+|..... + ..+..+..+++|+.|++++|+++ .+|..+..+++|
T Consensus 157 L~~n~~~~~~p~~~~~-----------------------~----~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L 208 (328)
T 4fcg_A 157 IRACPELTELPEPLAS-----------------------T----DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNL 208 (328)
T ss_dssp EEEETTCCCCCSCSEE-----------------------E----C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTC
T ss_pred CCCCCCccccChhHhh-----------------------c----cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCC
Confidence 9998877666542111 0 12334566778888888888887 667778888888
Q ss_pred CEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCc
Q 002155 344 TTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN 423 (959)
Q Consensus 344 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 423 (959)
++|++++|++++ +|..+..+++|+.|++++|.+.+.+|..+..+++|++|++++|++.+.+|..+.++++|++|+|++|
T Consensus 209 ~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n 287 (328)
T 4fcg_A 209 KSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGC 287 (328)
T ss_dssp CEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTC
T ss_pred CEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCC
Confidence 888888888885 5557888888899999988888888888888999999999998888888888989999999999999
Q ss_pred cccCCCchhhhcccccceEeeccccccCCc
Q 002155 424 ELDGQLPSSLSNILNLVGLYLQHNKLSGPV 453 (959)
Q Consensus 424 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 453 (959)
.+.+.+|..+..+++|+.+++..|.+..+.
T Consensus 288 ~~~~~iP~~l~~L~~L~~l~l~~~~~~~l~ 317 (328)
T 4fcg_A 288 VNLSRLPSLIAQLPANCIILVPPHLQAQLD 317 (328)
T ss_dssp TTCCCCCGGGGGSCTTCEEECCGGGSCC--
T ss_pred CchhhccHHHhhccCceEEeCCHHHHHHHh
Confidence 888889999999999999988888776543
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-28 Score=269.87 Aligned_cols=217 Identities=21% Similarity=0.195 Sum_probs=150.7
Q ss_pred ccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeee
Q 002155 42 NQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVI 121 (959)
Q Consensus 42 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 121 (959)
..++.++++.+.+...++..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+ |..+++|++|++
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 345666777777764555555666778888888888876666777788888888888888776554 777788888888
Q ss_pred cccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccC
Q 002155 122 FRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHL 201 (959)
Q Consensus 122 ~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~ 201 (959)
++|.+.+..+. .+|++|++++|++++..+.. +++|++|++++|.+++..+..++.+++|++|+|++|.+++..
T Consensus 88 s~n~l~~l~~~----~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 88 NNNYVQELLVG----PSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp CSSEEEEEEEC----TTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred cCCccccccCC----CCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 88877654322 45777777777777655443 466777777777777666667777777777777777777665
Q ss_pred Ccccc-CCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCC
Q 002155 202 PKEIG-NLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 202 ~~~~~-~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
+..+. .+++|++|+|++|.|+.. + ....+++|++|+|++|+++++. ..|..+++|+.|+|++|+++
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~-~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcch-hhhcccCcccEEECcCCccc
Confidence 66553 677777777777777754 2 2334677777777777777553 34777777777777777664
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.3e-28 Score=265.20 Aligned_cols=245 Identities=23% Similarity=0.229 Sum_probs=181.7
Q ss_pred cccceecCCCcCCCCCCcccCCcccccEEEccCCcCc-ccCCcccc-------CCCCCCEEEccCCCCCCCCCCCc--CC
Q 002155 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLS-GKIPGSLS-------RLTNLTTLDLSRNQLTGPIPSEF--GD 363 (959)
Q Consensus 294 ~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~-~~~~~~~~-------~l~~L~~L~Ls~n~l~~~~~~~~--~~ 363 (959)
+|+.+++++|.+ .+|..+... ++.|++++|.++ ...|..+. ++++|++|++++|++++..|..+ ..
T Consensus 44 ~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 119 (312)
T 1wwl_A 44 SLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEAT 119 (312)
T ss_dssp ECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCC
T ss_pred CceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhc
Confidence 344445555555 344444433 666677777763 34454444 68889999999998887777765 78
Q ss_pred CCcceEEEeeCcccCCccccccccC-----CCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCC--Cchhh--h
Q 002155 364 SIKLQGLYLGNNQLTGSIPWSLGSL-----GGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQ--LPSSL--S 434 (959)
Q Consensus 364 l~~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~l--~ 434 (959)
+++|++|++++|++++. |..+..+ ++|++|++++|++++..+..|+++++|++|++++|++.+. .+..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 88899999999998866 7777776 8899999999999888888899999999999999987654 23344 7
Q ss_pred cccccceEeeccccccCCcc---ccccchhhhhhceeccCCcccCCCCC-ccccCccccceeeeccccccccCCcCCcCC
Q 002155 435 NILNLVGLYLQHNKLSGPVD---ELFSNSAAWKIATMNMSNNLFDGGLP-RSLGNLSYLTNLDLHENKFTGEIPPDLGNL 510 (959)
Q Consensus 435 ~l~~L~~L~L~~N~l~~~~~---~~~~~~~~~~l~~L~ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 510 (959)
.+++|+.|++++|+|++++. ..|.... +++.|++++|.+++..| ..+..+++|++|+|++|+++ .+|..+.
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-- 273 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARV--QLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-- 273 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTC--CCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCC--CCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--
Confidence 88899999999999885432 2222222 67778888888877664 45566788888888888888 7777776
Q ss_pred CCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCccc
Q 002155 511 MQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGM 550 (959)
Q Consensus 511 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 550 (959)
++|++|||++|+|++. |. +..+++|++|++++|++++.
T Consensus 274 ~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 274 AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 7888888888888865 55 88888888888888888753
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.5e-28 Score=262.36 Aligned_cols=230 Identities=23% Similarity=0.238 Sum_probs=111.6
Q ss_pred CCCcccCCCccccEEecCCCcc-cccCCcCcc-------CCCCCcEEEcCCCcCCCCCCccc--CCCCCCcEEEccCccc
Q 002155 33 SLPSWLGNWNQMESLLLSSNQF-IGKIPPEIG-------NCSMLKSISLSNNFLSGSIPREL--CTSESLEEIDLDGNLL 102 (959)
Q Consensus 33 ~lp~~~~~l~~L~~L~L~~n~l-~~~~~~~~~-------~l~~L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~L~~n~l 102 (959)
.+|..+... |+.|+|++|++ ...+|..+. ++++|++|+|++|++++.+|..+ ..+++|++|+|++|++
T Consensus 56 ~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 133 (312)
T 1wwl_A 56 ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSW 133 (312)
T ss_dssp CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBC
T ss_pred ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCC
Confidence 555544433 55555555555 223444443 45555555555555555555544 5555555555555555
Q ss_pred cccCCcccccC-----CCCceeeecccccccccCcccCCC-cccEEeccCCccccc--cCccc--ccccceeEEEccccc
Q 002155 103 TGTIEGVFEKC-----SNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGI--IPVSI--WNSETLMEFSAANNL 172 (959)
Q Consensus 103 ~~~~~~~~~~l-----~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~--~p~~~--~~~~~L~~L~l~~n~ 172 (959)
++. |..|..+ ++|++|+|++|.+.+..|..+..+ +|++|++++|++.+. .|..+ ..+++|++|++++|+
T Consensus 134 ~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~ 212 (312)
T 1wwl_A 134 ATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAG 212 (312)
T ss_dssp SSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSC
T ss_pred cch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCc
Confidence 554 4445544 555555555555555444444444 255555555554433 11122 444555555555555
Q ss_pred ccc---ccCccccCCcCCceEeccCCcccccCC-ccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCC
Q 002155 173 LEG---SLPYEVGNAAALERLVLTNNMLKGHLP-KEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGL 248 (959)
Q Consensus 173 l~~---~~~~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 248 (959)
+++ .....+.++++|++|+|++|++++..| ..+..+++|++|+|++|.|+ .+|..+. ++|++|+|++|+|++.
T Consensus 213 l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 213 METPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN 289 (312)
T ss_dssp CCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC
T ss_pred CcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC
Confidence 541 111223344555555555555554332 23344455555555555554 3333333 4455555555555443
Q ss_pred CchhhhcccCCCeeEcccccCC
Q 002155 249 IPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 249 ~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
|. +..+++|++|+|++|+++
T Consensus 290 -p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 290 -PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp -CC-TTTSCEEEEEECTTCTTT
T ss_pred -hh-HhhCCCCCEEeccCCCCC
Confidence 32 445555555555555443
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.9e-26 Score=265.85 Aligned_cols=268 Identities=27% Similarity=0.342 Sum_probs=145.7
Q ss_pred cccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeec
Q 002155 43 QMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIF 122 (959)
Q Consensus 43 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 122 (959)
.++.|++++|++. .+|..+. ++|++|+|++|.++ .+|. .+++|++|+|++|+|+++++ .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSLPV----LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSCCCC----CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCcCCC----CCCCCCEEECc
Confidence 4677777777776 6666655 67777777777777 4554 45677777777777764333 45566666665
Q ss_pred ccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCC
Q 002155 123 RNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLP 202 (959)
Q Consensus 123 ~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 202 (959)
+|.+.+..+ ...+|++|++++|++++ +|.. +++|++|+|++|++++ +|
T Consensus 110 ~N~l~~l~~---~l~~L~~L~L~~N~l~~-------------------------lp~~---l~~L~~L~Ls~N~l~~-l~ 157 (622)
T 3g06_A 110 SNPLTHLPA---LPSGLCKLWIFGNQLTS-------------------------LPVL---PPGLQELSVSDNQLAS-LP 157 (622)
T ss_dssp SCCCCCCCC---CCTTCCEEECCSSCCSC-------------------------CCCC---CTTCCEEECCSSCCSC-CC
T ss_pred CCcCCCCCC---CCCCcCEEECCCCCCCc-------------------------CCCC---CCCCCEEECcCCcCCC-cC
Confidence 555543221 11123333333333332 2211 2444444444444442 22
Q ss_pred ccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhh
Q 002155 203 KEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFR 282 (959)
Q Consensus 203 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 282 (959)
. .+++|+.|++++|.|+. +| ..+++|+.|+|++|+++++ |. .+++|+.|++++|.+
T Consensus 158 ~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l------------- 213 (622)
T 3g06_A 158 A---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASL-PT---LPSELYKLWAYNNRL------------- 213 (622)
T ss_dssp C---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCC-------------
T ss_pred C---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCC-CC---ccchhhEEECcCCcc-------------
Confidence 2 12344444444444442 22 2233444444444444432 11 123344444443333
Q ss_pred ccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcC
Q 002155 283 QANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFG 362 (959)
Q Consensus 283 ~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 362 (959)
+. +|. .+++|++|++++|++++ +| .
T Consensus 214 -----------------------------------------------~~-l~~---~~~~L~~L~Ls~N~L~~-lp---~ 238 (622)
T 3g06_A 214 -----------------------------------------------TS-LPA---LPSGLKELIVSGNRLTS-LP---V 238 (622)
T ss_dssp -----------------------------------------------SS-CCC---CCTTCCEEECCSSCCSC-CC---C
T ss_pred -----------------------------------------------cc-cCC---CCCCCCEEEccCCccCc-CC---C
Confidence 31 111 12556666666666664 33 3
Q ss_pred CCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhccc
Q 002155 363 DSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL 437 (959)
Q Consensus 363 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~ 437 (959)
.+++|+.|++++|.|+ .+|. .+++|+.|+|++|+|+ .+|..|.++++|+.|+|++|++++..|..+..++
T Consensus 239 ~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 239 LPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 3456777777777776 3443 4567777777777777 5577777788888888888888777777666655
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-25 Score=264.32 Aligned_cols=193 Identities=27% Similarity=0.321 Sum_probs=138.8
Q ss_pred hhhhhhcCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCc
Q 002155 21 LTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGN 100 (959)
Q Consensus 21 ~~~~~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 100 (959)
++.++..++-++.+|..+. ++|++|+|++|++. .+|. .+++|++|+|++|+++ .+|. .+++|++|+|++|
T Consensus 42 l~~L~ls~n~L~~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N 111 (622)
T 3g06_A 42 NAVLNVGESGLTTLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSN 111 (622)
T ss_dssp CCEEECCSSCCSCCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSC
T ss_pred CcEEEecCCCcCccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCC
Confidence 4456666666679999887 79999999999998 6776 6799999999999998 5665 6899999999999
Q ss_pred cccccCCcccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCcc
Q 002155 101 LLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180 (959)
Q Consensus 101 ~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~ 180 (959)
.+++++. .+++|+.|++++|.+.+ +|..+ .+|++|++++|+++++ |.
T Consensus 112 ~l~~l~~----~l~~L~~L~L~~N~l~~-lp~~l--~~L~~L~Ls~N~l~~l-~~------------------------- 158 (622)
T 3g06_A 112 PLTHLPA----LPSGLCKLWIFGNQLTS-LPVLP--PGLQELSVSDNQLASL-PA------------------------- 158 (622)
T ss_dssp CCCCCCC----CCTTCCEEECCSSCCSC-CCCCC--TTCCEEECCSSCCSCC-CC-------------------------
T ss_pred cCCCCCC----CCCCcCEEECCCCCCCc-CCCCC--CCCCEEECcCCcCCCc-CC-------------------------
Confidence 9997654 67899999999999986 44433 4578888888877743 22
Q ss_pred ccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCC
Q 002155 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQ 260 (959)
Q Consensus 181 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 260 (959)
.+++|+.|++++|.|+. +| ..+++|+.|+|++|.|++ +|.. +++|+.|++++|.++.+ |. .+++|+
T Consensus 159 --~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l-~~---~~~~L~ 224 (622)
T 3g06_A 159 --LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSL-PA---LPSGLK 224 (622)
T ss_dssp --CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSC-CC---CCTTCC
T ss_pred --ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccccc-CC---CCCCCC
Confidence 12455666666666663 34 345667777777777764 3322 35677777777777643 32 235666
Q ss_pred eeEcccccCC
Q 002155 261 CLVLSHNNLS 270 (959)
Q Consensus 261 ~L~Ls~N~l~ 270 (959)
.|+|++|.|+
T Consensus 225 ~L~Ls~N~L~ 234 (622)
T 3g06_A 225 ELIVSGNRLT 234 (622)
T ss_dssp EEECCSSCCS
T ss_pred EEEccCCccC
Confidence 6666666554
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-27 Score=260.94 Aligned_cols=247 Identities=25% Similarity=0.207 Sum_probs=165.3
Q ss_pred ccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccC
Q 002155 179 YEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQ 258 (959)
Q Consensus 179 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 258 (959)
..+..+++|++|+|++|.|++..|..|.++++|++|+|++|.+++..+ +..+++|++|+|++|++++.. ..++
T Consensus 28 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~ 100 (317)
T 3o53_A 28 SLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPS 100 (317)
T ss_dssp HHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTT
T ss_pred HHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCC
Confidence 334444555555555555554444555555555555555555554332 555555555555555555332 2255
Q ss_pred CCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccc-
Q 002155 259 LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSL- 337 (959)
Q Consensus 259 L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~- 337 (959)
|++|++++|++++..+. .+++|+.|++++|.+++..+..+..+++|+.|++++|.+++..+..+
T Consensus 101 L~~L~l~~n~l~~~~~~---------------~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 165 (317)
T 3o53_A 101 IETLHAANNNISRVSCS---------------RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA 165 (317)
T ss_dssp CCEEECCSSCCSEEEEC---------------CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGG
T ss_pred cCEEECCCCccCCcCcc---------------ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHh
Confidence 55555555555422111 12345556666666665666677788888888888888888777766
Q ss_pred cCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccc
Q 002155 338 SRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTH 417 (959)
Q Consensus 338 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 417 (959)
..+++|++|++++|.+++. + ....+++|++|++++|++++ +|..+..+++|+.|++++|+++ .+|..+..+++|++
T Consensus 166 ~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~ 241 (317)
T 3o53_A 166 ASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEH 241 (317)
T ss_dssp GGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCE
T ss_pred hccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCE
Confidence 4788999999999998865 2 23347889999999999884 4455888889999999999988 46777888888999
Q ss_pred cccCCcccc-CCCchhhhcccccceEeeccc-cccC
Q 002155 418 LDLSFNELD-GQLPSSLSNILNLVGLYLQHN-KLSG 451 (959)
Q Consensus 418 L~L~~N~l~-~~~~~~l~~l~~L~~L~L~~N-~l~~ 451 (959)
|++++|++. +.+|..+..+++|+.|+++++ .+++
T Consensus 242 L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~ 277 (317)
T 3o53_A 242 FDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTG 277 (317)
T ss_dssp EECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred EEccCCCccCcCHHHHHhccccceEEECCCchhccC
Confidence 999999887 667788888888888888743 3443
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.9e-28 Score=284.31 Aligned_cols=184 Identities=17% Similarity=0.091 Sum_probs=129.2
Q ss_pred eccCCCeEEEEEEc-CCCCEEEEEEcccc----------chhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEE
Q 002155 687 IGDGGFGTVYKAAL-PDGKTVAVKKLSQA----------KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 687 lg~G~~g~V~~~~~-~~~~~vavK~~~~~----------~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.+.|++|.+..++. .-|+.||||++... .....++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 55666776665542 25889999998642 123346789999999999 6999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||++|++|.+++.... +++.. +|+.||+.||+|+| +.|||||||||+|||++++|++||+|||+|+....
T Consensus 322 Eyv~G~~L~d~i~~~~----~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE----EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp ECCCSEEHHHHHHTTC----CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred ecCCCCcHHHHHHhCC----CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 9999999999998754 34443 58999999999999 89999999999999999999999999999987643
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p 882 (959)
.. ......+||++|||||++.+ .+..++|+||+|++.+++.++..+
T Consensus 392 ~~-~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 392 DC-SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CC-ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 22 22344679999999999875 467789999999998887665444
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.7e-27 Score=271.66 Aligned_cols=244 Identities=20% Similarity=0.180 Sum_probs=156.9
Q ss_pred cccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEE
Q 002155 316 CVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLN 395 (959)
Q Consensus 316 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 395 (959)
+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..| |..+++|+.|+|++|.+++.. ..++|++|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEE
Confidence 3456666666666666666666666666666666666664443 566666666666666665322 225666666
Q ss_pred ccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCcccccc-chhhhhhceeccCCcc
Q 002155 396 LTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFS-NSAAWKIATMNMSNNL 474 (959)
Q Consensus 396 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~-~~~~~~l~~L~ls~N~ 474 (959)
+++|.+++..+.. +++|++|+|++|.+++..|..+..+++|+.|+|++|.++++++..|. .+. .|+.|+|++|.
T Consensus 106 L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~--~L~~L~Ls~N~ 180 (487)
T 3oja_A 106 AANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSD--TLEHLNLQYNF 180 (487)
T ss_dssp CCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTT--TCCEEECTTSC
T ss_pred CcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCC--cccEEecCCCc
Confidence 6666666544432 35566666666666665566666666666666666666665444433 222 56666666666
Q ss_pred cCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCc-ccC-C
Q 002155 475 FDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLE-GMV-P 552 (959)
Q Consensus 475 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~-~ 552 (959)
+++.. .+..+++|+.|+|++|++++ +|+.+..+++|+.|+|++|+|++ +|..+..+++|+.|++++|++. +.+ .
T Consensus 181 l~~~~--~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~ 256 (487)
T 3oja_A 181 IYDVK--GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (487)
T ss_dssp CCEEE--CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHH
T ss_pred ccccc--ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHH
Confidence 66442 23357888888888888885 55558888888888888888885 6777888888888888888887 222 2
Q ss_pred CCcccCCCcccccc-------CCCCCCCCC
Q 002155 553 RSGICQNLSKISLT-------GNKDLCGKI 575 (959)
Q Consensus 553 ~~~~~~~l~~l~l~-------~N~~~c~~~ 575 (959)
....+..+..+.+. +|++.|.++
T Consensus 257 ~~~~l~~L~~l~~~~~~~~~~~~~~~c~~~ 286 (487)
T 3oja_A 257 FFSKNQRVQTVAKQTVKKLTGQNEEECTVP 286 (487)
T ss_dssp HHTTCHHHHHHHHHHHHHHTSSSSCCCSST
T ss_pred HHHhCCCCcEEeccccccccCCCcccccCC
Confidence 22334556666665 788877653
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-26 Score=267.79 Aligned_cols=192 Identities=23% Similarity=0.233 Sum_probs=102.0
Q ss_pred CCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEeccC
Q 002155 67 MLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDS 146 (959)
Q Consensus 67 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~ 146 (959)
+|++|+|++|.+++.+|..|..+++|++|+|++|.+++.++ |..+++|++|+|++|.+.+..+. .+|++|++++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~----~~L~~L~L~~ 108 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG----PSIETLHAAN 108 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC----TTCCEEECCS
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC----CCcCEEECcC
Confidence 45555555555544444444455555555555555444333 44455555555555544433221 3455555555
Q ss_pred CccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCcccc-CCCCCCEEEccCCcCCccC
Q 002155 147 NNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIG-NLSALSVLDLNSNLFDGII 225 (959)
Q Consensus 147 n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~N~i~~~~ 225 (959)
|++++..+. .+++|+.|++++|.+++..|..|+++++|+.|+|++|.+++..|..+. .+++|++|+|++|.|++..
T Consensus 109 N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~ 185 (487)
T 3oja_A 109 NNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK 185 (487)
T ss_dssp SCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE
T ss_pred CcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccccc
Confidence 555544332 234555556666655555555566666666666666666655555554 5666666666666666442
Q ss_pred CccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCC
Q 002155 226 PYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 226 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
+ +..+++|++|+|++|++++++| .|..+++|+.|+|++|.++
T Consensus 186 ~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 186 G--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp C--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCC
T ss_pred c--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCc
Confidence 2 2345666666666666665433 3556666666666666554
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.3e-25 Score=234.96 Aligned_cols=207 Identities=26% Similarity=0.283 Sum_probs=138.3
Q ss_pred CCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCC-cccEEecc
Q 002155 67 MLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLD 145 (959)
Q Consensus 67 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls 145 (959)
+|++|+|++|++++..+..|..+++|++|++++|+++++.+..|.++++|++|+|++|.+.+..+..+..+ +|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45555555555554444445555555555555555554444455555555555555555554444444444 35555556
Q ss_pred CCccccccCcccccccceeEEEccccccccc-cCccccCCcCCceEeccCCcccccCCccccCCCCCC----EEEccCCc
Q 002155 146 SNNFTGIIPVSIWNSETLMEFSAANNLLEGS-LPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALS----VLDLNSNL 220 (959)
Q Consensus 146 ~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~----~L~L~~N~ 220 (959)
+|++++..+..+..+++|++|++++|.+++. +|..|.++++|++|+|++|++++..+..|..+.+|+ .|++++|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 6666655555666777777777777777653 577888888888888888888877667777766666 88888888
Q ss_pred CCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCC
Q 002155 221 FDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIP 274 (959)
Q Consensus 221 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 274 (959)
++++.+..+.. .+|++|+|++|++++..+..|..+++|+.|+|++|.+.+..+
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 88666655544 478999999999888777778888999999999998876544
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-24 Score=233.53 Aligned_cols=206 Identities=27% Similarity=0.236 Sum_probs=168.8
Q ss_pred ccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCccccc
Q 002155 337 LSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELT 416 (959)
Q Consensus 337 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 416 (959)
+..+++++++++++|.++. +|..+. ++++.|++++|.+++..+..|..+++|++|+|++|.|++..+ ...+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCC
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCC
Confidence 5677888888888888884 444432 578888888888887777888888888888888888885433 26788888
Q ss_pred ccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeecc
Q 002155 417 HLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHE 496 (959)
Q Consensus 417 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 496 (959)
+|++++|+++ .+|..+..+++|+.|++++|+|++++ |..|.++++|++|+|++
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~--------------------------~~~~~~l~~L~~L~L~~ 133 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLP--------------------------LGALRGLGELQELYLKG 133 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCC--------------------------SSTTTTCTTCCEEECTT
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccC--------------------------HHHHcCCCCCCEEECCC
Confidence 8888888887 67777888888888888888877544 34566788899999999
Q ss_pred ccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccCCCccccccCCCCCCCC
Q 002155 497 NKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 497 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~ 574 (959)
|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+++.+++.......++.+++.+|||.|+|
T Consensus 134 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 134 NELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcC
Confidence 999977777788899999999999999977777788899999999999999988887777788999999999999964
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-24 Score=230.44 Aligned_cols=228 Identities=24% Similarity=0.241 Sum_probs=166.3
Q ss_pred eecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCccc
Q 002155 298 FDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQL 377 (959)
Q Consensus 298 l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 377 (959)
++.++..+. .+|..+. ++++.|++++|++++..+..|.++++|++|++++|++++..+..|..+++|+.|++++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 344444444 3455443 4688888888888877777888888888888888888877777888888888888888888
Q ss_pred CCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCC-CchhhhcccccceEeeccccccCCcccc
Q 002155 378 TGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQ-LPSSLSNILNLVGLYLQHNKLSGPVDEL 456 (959)
Q Consensus 378 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 456 (959)
++..+..|..+++|++|++++|++.+..+..+.++++|++|++++|++++. +|..+..+++|+.|++++|+++++++..
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 168 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHH
Confidence 877777888888888888888888877776788888888888888888753 5788888888888888888887665544
Q ss_pred ccchhhhhhceeccCCcccCCCCCccccCccccc-eeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCC
Q 002155 457 FSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLT-NLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLS 535 (959)
Q Consensus 457 ~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 535 (959)
|.... .++.|. .|++++|++++..+..+ ...+|++|+|++|++++..+..+..++
T Consensus 169 ~~~l~-----------------------~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~ 224 (276)
T 2z62_A 169 LRVLH-----------------------QMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLT 224 (276)
T ss_dssp GHHHH-----------------------TCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCC
T ss_pred hhhhh-----------------------hccccceeeecCCCcccccCcccc-CCCcccEEECCCCceeecCHhHhcccc
Confidence 43221 122222 67788888774444433 345788888888888766666667777
Q ss_pred CccEEecccCcCcccCC
Q 002155 536 NLLYLSLAENRLEGMVP 552 (959)
Q Consensus 536 ~L~~L~l~~N~l~~~~~ 552 (959)
+|+.|++++|++.+..+
T Consensus 225 ~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 225 SLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp SCCEEECCSSCBCCCTT
T ss_pred cccEEEccCCcccccCC
Confidence 77777777777765544
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.7e-27 Score=283.22 Aligned_cols=377 Identities=15% Similarity=0.113 Sum_probs=208.2
Q ss_pred cccEEeccCCccccccCcccc-cccceeEEEcccc-ccccc-cCccccCCcCCceEeccCCcccccCCcccc----CCCC
Q 002155 138 PLMVLDLDSNNFTGIIPVSIW-NSETLMEFSAANN-LLEGS-LPYEVGNAAALERLVLTNNMLKGHLPKEIG----NLSA 210 (959)
Q Consensus 138 ~L~~L~ls~n~l~~~~p~~~~-~~~~L~~L~l~~n-~l~~~-~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~----~l~~ 210 (959)
+|++|++++|.+++..+..+. .+++|++|++++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++
T Consensus 106 ~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~ 185 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTS 185 (594)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCC
T ss_pred CCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCc
Confidence 466666666666655555554 5677777777777 45432 344445788888888888887765544443 5668
Q ss_pred CCEEEccCCc--CCc-cCCccccCCCCCCEEEcccc-cCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCC
Q 002155 211 LSVLDLNSNL--FDG-IIPYELGDCISLTTLDLGNN-NLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANM 286 (959)
Q Consensus 211 L~~L~L~~N~--i~~-~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~ 286 (959)
|+.|++++|. +.. .++..+..+++|++|+|++| .+++ ++..+..+++|+.|+++.+..
T Consensus 186 L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~----------------- 247 (594)
T 2p1m_B 186 LVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTA----------------- 247 (594)
T ss_dssp CCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCC-----------------
T ss_pred CcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccC-----------------
Confidence 8888888886 221 11222345688899998888 4443 677788888888888776532
Q ss_pred CCccccccccceecCCCcCCCCCCcccCCcccccEE-EccCCcCcccCCccccCCCCCCEEEccCCCCCCCC-CCCcCCC
Q 002155 287 PDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDL-LLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPI-PSEFGDS 364 (959)
Q Consensus 287 ~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L-~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~~~~~~l 364 (959)
+++.|.+.+ ++..+.++++|+.| .+.+... ..++..+..+++|++|++++|.++... ...+..+
T Consensus 248 ------------~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~ 313 (594)
T 2p1m_B 248 ------------EVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQC 313 (594)
T ss_dssp ------------CCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTC
T ss_pred ------------ccchhhHHH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcC
Confidence 111122221 22344555666665 2322221 233444456778888888888765321 1224567
Q ss_pred CcceEEEeeCcccCCc-cccccccCCCCcEEEccC---------CcCCCCCCCccC-CcccccccccCCccccCCCchhh
Q 002155 365 IKLQGLYLGNNQLTGS-IPWSLGSLGGLVKLNLTG---------NKLSGKVPTSFG-NLKELTHLDLSFNELDGQLPSSL 433 (959)
Q Consensus 365 ~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~---------N~i~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~l 433 (959)
++|+.|++++| +... .+.....+++|++|++.+ +.+++.....+. ++++|++|+++.|.+++..+..+
T Consensus 314 ~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l 392 (594)
T 2p1m_B 314 PKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITI 392 (594)
T ss_dssp TTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHH
T ss_pred CCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHH
Confidence 78888888877 4322 222233577888888733 344322222222 36777777777777775544445
Q ss_pred h-cccccceEeec--c----ccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcC
Q 002155 434 S-NILNLVGLYLQ--H----NKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPD 506 (959)
Q Consensus 434 ~-~l~~L~~L~L~--~----N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 506 (959)
. .+++|+.|+++ + |.++..+.+. .++..+..+++|+.|+|++ .+++..+..
T Consensus 393 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~---------------------~~~~l~~~~~~L~~L~L~~-~l~~~~~~~ 450 (594)
T 2p1m_B 393 ARNRPNMTRFRLCIIEPKAPDYLTLEPLDI---------------------GFGAIVEHCKDLRRLSLSG-LLTDKVFEY 450 (594)
T ss_dssp HHHCTTCCEEEEEESSTTCCCTTTCCCTHH---------------------HHHHHHHHCTTCCEEECCS-SCCHHHHHH
T ss_pred HhhCCCcceeEeecccCCCcccccCCchhh---------------------HHHHHHhhCCCccEEeecC-cccHHHHHH
Confidence 4 47788888887 3 4454332110 0011123344555555544 343333333
Q ss_pred CcC-CCCCcEEeCCCCcCCCCCCccc-cCCCCccEEecccCcCcccCC--CCcccCCCccccccCCC
Q 002155 507 LGN-LMQLEYLDVSRNRLCGQIPETM-CSLSNLLYLSLAENRLEGMVP--RSGICQNLSKISLTGNK 569 (959)
Q Consensus 507 ~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~~--~~~~~~~l~~l~l~~N~ 569 (959)
++. +++|++|+|++|.+++..+..+ ..+++|++|++++|+++.... ....+++|+.+++.+|+
T Consensus 451 l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 451 IGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp HHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred HHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 333 4555555555555543333333 345555555555555532211 11224455555555543
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-27 Score=286.31 Aligned_cols=440 Identities=16% Similarity=0.128 Sum_probs=230.3
Q ss_pred cEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCC---CCCcc------------cCCCCCCcEEEccCccccccCCcc
Q 002155 45 ESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSG---SIPRE------------LCTSESLEEIDLDGNLLTGTIEGV 109 (959)
Q Consensus 45 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~---~~p~~------------~~~l~~L~~L~L~~n~l~~~~~~~ 109 (959)
+.++++++... ..+..+..+++|++|+|++|.... ..|.. +..+++|++|+|++|.+++..+..
T Consensus 46 ~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~ 124 (594)
T 2p1m_B 46 RKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLEL 124 (594)
T ss_dssp CEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHH
T ss_pred eEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHH
Confidence 45666655433 223346778889999999875321 22222 234667777888777777655555
Q ss_pred cc-cCCCCceeeeccc-ccccc-cCcccC-CCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCc
Q 002155 110 FE-KCSNLSQLVIFRN-HIYGS-IPEYLS-KLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAA 185 (959)
Q Consensus 110 ~~-~l~~L~~L~L~~n-~~~~~-~p~~~~-~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 185 (959)
+. .+++|++|+|++| .+... ++.... ..+|++|++++|.+++..+..+.. ....++
T Consensus 125 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~--------------------~~~~~~ 184 (594)
T 2p1m_B 125 IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSH--------------------FPDTYT 184 (594)
T ss_dssp HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGG--------------------SCTTCC
T ss_pred HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHH--------------------HhhcCC
Confidence 54 5777777777777 33321 222222 224666666666655443333221 112344
Q ss_pred CCceEeccCCc--ccc-cCCccccCCCCCCEEEccCC-cCCccCCccccCCCCCCEEEcccc-------cCCCCCchhhh
Q 002155 186 ALERLVLTNNM--LKG-HLPKEIGNLSALSVLDLNSN-LFDGIIPYELGDCISLTTLDLGNN-------NLSGLIPEKIA 254 (959)
Q Consensus 186 ~L~~L~L~~n~--i~~-~~~~~~~~l~~L~~L~L~~N-~i~~~~~~~~~~l~~L~~L~L~~N-------~l~~~~~~~~~ 254 (959)
+|++|++++|. +.. .++..+..+++|++|+|++| .+. .++..+..+++|++|+++.+ .+.+. +..+.
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l-~~~l~ 262 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGL-SVALS 262 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHH-HHHHH
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHH-HHHHh
Confidence 55555555554 111 01111223455555555555 233 24445555555665553332 22322 33455
Q ss_pred cccCCCeeE-cccccCCCCCCCCCcchhhccCCCC-ccccccccceecCCCcCCCC-CCcccCCcccccEEEccCCcCcc
Q 002155 255 DLAQLQCLV-LSHNNLSGPIPSKPSSYFRQANMPD-LSFIQHHGVFDLSYNRLSGP-IPEELGSCVVVVDLLLNNNMLSG 331 (959)
Q Consensus 255 ~l~~L~~L~-Ls~N~l~~~~~~~~~~~~~~~~~~~-l~~l~~L~~l~L~~n~l~~~-~p~~~~~~~~L~~L~L~~n~i~~ 331 (959)
++++|+.|. +.+... ..++. ...+.+|+.|++++|.+++. ++..+..+++|+.|++.+| ++.
T Consensus 263 ~~~~L~~Ls~~~~~~~--------------~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~ 327 (594)
T 2p1m_B 263 GCKELRCLSGFWDAVP--------------AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IED 327 (594)
T ss_dssp TCTTCCEEECCBTCCG--------------GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHH
T ss_pred cCCCcccccCCcccch--------------hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCH
Confidence 556666552 221110 00011 11234455555555554321 1222456778888888877 442
Q ss_pred cC-CccccCCCCCCEEEccC---------CCCCCCCCCCc-CCCCcceEEEeeCcccCCccccccc-cCCCCcEEEcc--
Q 002155 332 KI-PGSLSRLTNLTTLDLSR---------NQLTGPIPSEF-GDSIKLQGLYLGNNQLTGSIPWSLG-SLGGLVKLNLT-- 397 (959)
Q Consensus 332 ~~-~~~~~~l~~L~~L~Ls~---------n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~-- 397 (959)
.. +.....+++|++|++++ +.+++.....+ ..+++|+.|.++.|.+++.....+. .+++|+.|+++
T Consensus 328 ~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~ 407 (594)
T 2p1m_B 328 AGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCII 407 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEES
T ss_pred HHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecc
Confidence 22 22233578888888844 33332111112 1356777777777777655444443 46777777777
Q ss_pred C----CcCCCCCC-----CccCCcccccccccCCccccCCCchhhhc-ccccceEeeccccccCCccccccchhhhhhce
Q 002155 398 G----NKLSGKVP-----TSFGNLKELTHLDLSFNELDGQLPSSLSN-ILNLVGLYLQHNKLSGPVDELFSNSAAWKIAT 467 (959)
Q Consensus 398 ~----N~i~~~~~-----~~~~~l~~L~~L~L~~N~l~~~~~~~l~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~ 467 (959)
+ |.++.... ..+.++++|++|++++ .+++..+..+.. +++|+.|++++|.+++
T Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~---------------- 470 (594)
T 2p1m_B 408 EPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSD---------------- 470 (594)
T ss_dssp STTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSH----------------
T ss_pred cCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcH----------------
Confidence 3 34442111 1134455666666655 444333333433 5566666666665532
Q ss_pred eccCCcccCCCCCccc-cCccccceeeeccccccccCCc-CCcCCCCCcEEeCCCCcCCCCCCccc-cCCCCccEEeccc
Q 002155 468 MNMSNNLFDGGLPRSL-GNLSYLTNLDLHENKFTGEIPP-DLGNLMQLEYLDVSRNRLCGQIPETM-CSLSNLLYLSLAE 544 (959)
Q Consensus 468 L~ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~ 544 (959)
..+..+ .++++|++|+|++|.+++..+. ....+++|++|++++|+++......+ ..+++|+...+..
T Consensus 471 ----------~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~ 540 (594)
T 2p1m_B 471 ----------LGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDE 540 (594)
T ss_dssp ----------HHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECS
T ss_pred ----------HHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecC
Confidence 222222 4577888889988888654443 34457888999999888754333334 4578887777776
Q ss_pred CcCcc
Q 002155 545 NRLEG 549 (959)
Q Consensus 545 N~l~~ 549 (959)
+.-..
T Consensus 541 ~~~~~ 545 (594)
T 2p1m_B 541 RGAPD 545 (594)
T ss_dssp SSCGG
T ss_pred CCccc
Confidence 65443
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=223.34 Aligned_cols=204 Identities=24% Similarity=0.232 Sum_probs=137.2
Q ss_pred cccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeec
Q 002155 43 QMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIF 122 (959)
Q Consensus 43 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 122 (959)
..+.++++++++. .+|..+. ++|++|+|++|++++..+..|..+++|++|++++|+++.+.++.|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 3556777777766 5665443 567777777777775555567777777777777777776666666666666666666
Q ss_pred ccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCC
Q 002155 123 RNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLP 202 (959)
Q Consensus 123 ~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 202 (959)
+|.+.+..+ ..|..+++|++|++++|.+++..+..|..+++|++|+|++|.|++..+
T Consensus 94 ~n~l~~~~~-----------------------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 150 (270)
T 2o6q_A 94 DNKLQALPI-----------------------GVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPK 150 (270)
T ss_dssp SSCCCCCCT-----------------------TTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCcCCcCCH-----------------------hHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCH
Confidence 666554443 344445555555555555554555556677777777777777776555
Q ss_pred ccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCC
Q 002155 203 KEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGP 272 (959)
Q Consensus 203 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 272 (959)
..|..+++|++|+|++|.++.+.+..|..+++|++|+|++|+++...+..|..+++|+.|+|++|.+...
T Consensus 151 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 151 GVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred hHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 5677777777777777777766666677777777777777777776666677777777777777777643
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=223.25 Aligned_cols=207 Identities=21% Similarity=0.228 Sum_probs=172.6
Q ss_pred CCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEecc
Q 002155 66 SMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLD 145 (959)
Q Consensus 66 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls 145 (959)
.+.+.+++++++++ .+|..+. ++|++|++++|+++++.+..|.++++|++|+|++|.+..
T Consensus 16 ~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~----------------- 75 (270)
T 2o6q_A 16 NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT----------------- 75 (270)
T ss_dssp TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSC-----------------
T ss_pred CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCe-----------------
Confidence 35788999999998 6777664 689999999999998877788888888888777776653
Q ss_pred CCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccC
Q 002155 146 SNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGII 225 (959)
Q Consensus 146 ~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 225 (959)
+.+..|.++++|++|++++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|.|+.+.
T Consensus 76 ------i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 76 ------LPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp ------CCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred ------eChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccC
Confidence 33344556777777777777777666778899999999999999999888888999999999999999999888
Q ss_pred CccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcC
Q 002155 226 PYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRL 305 (959)
Q Consensus 226 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l 305 (959)
+..|..+++|++|+|++|+++.+.+..|..+++|++|+|++|++++..+. .+..+.+|+.|++++|.+
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~------------~~~~l~~L~~L~l~~N~~ 217 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEG------------AFDSLEKLKMLQLQENPW 217 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTT------------TTTTCTTCCEEECCSSCB
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHH------------HhccccCCCEEEecCCCe
Confidence 77899999999999999999998888899999999999999999853322 244567888999999998
Q ss_pred CCCCC
Q 002155 306 SGPIP 310 (959)
Q Consensus 306 ~~~~p 310 (959)
....+
T Consensus 218 ~c~c~ 222 (270)
T 2o6q_A 218 DCTCN 222 (270)
T ss_dssp CCSSS
T ss_pred eCCCc
Confidence 76543
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.1e-25 Score=257.31 Aligned_cols=184 Identities=16% Similarity=0.176 Sum_probs=145.5
Q ss_pred CCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc--------hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 682 CKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK--------TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 682 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
...++||+|+||.||+|+. .++.+|+|+..... ....+.+.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3467899999999999965 57889999754321 11234578999999999999999777677777888999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.. +..++.|+++|++||| +.||+||||||+||+++. ++||+|||+++...
T Consensus 418 mE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 418 MSYINGKLAKDVIED------------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp EECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 999999999999875 4589999999999999 889999999999999998 99999999998775
Q ss_pred cccccc------cccccccccccCCCcCCC--CCCCCcCcchhHHHHHHHHHhCCCCC
Q 002155 834 ACETHV------STDIAGTFGYIPPEYGQS--GRSTTRGDVYSFGVILLELVTGKEPT 883 (959)
Q Consensus 834 ~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~ 883 (959)
...... .....||+.|||||++.. ..|+..+|+|+..+-..+-+.++.+|
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 432211 134579999999999876 56788899999999999888887775
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.90 E-value=4e-23 Score=221.76 Aligned_cols=203 Identities=21% Similarity=0.170 Sum_probs=149.2
Q ss_pred ccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccE
Q 002155 62 IGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMV 141 (959)
Q Consensus 62 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~ 141 (959)
++++++++++++++|+++ .+|..+. +++++|+|++|++++..+..|..+++|++|+|++|.+.+..+. -...+|++
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~~ 81 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGT 81 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCCE
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCCE
Confidence 556666666666666666 4554442 5666666666666666666666666666666666666644332 22234777
Q ss_pred EeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcC
Q 002155 142 LDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLF 221 (959)
Q Consensus 142 L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i 221 (959)
|++++|+++ .+|..+..+++|++|++++|++++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|
T Consensus 82 L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 777777776 4566777788888888888888866667788888888888888888877777788888888999988888
Q ss_pred CccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCC
Q 002155 222 DGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 222 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
+.+.+..|..+++|++|+|++|+++. +|..+..+.+|+.|+|++|.+.
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~~-ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCBC
T ss_pred CccCHHHhcCcCCCCEEECCCCcCCc-cChhhcccccCCeEEeCCCCcc
Confidence 87777777888889999999888884 4667777788888888888875
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-23 Score=222.28 Aligned_cols=137 Identities=28% Similarity=0.311 Sum_probs=69.4
Q ss_pred cCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCc
Q 002155 313 LGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLV 392 (959)
Q Consensus 313 ~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 392 (959)
+..+++|+.|++++|.+++..+..|..+++|++|++++|++++..+..|..+++|+.|++++|++++..+..+..+++|+
T Consensus 81 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 160 (272)
T 3rfs_A 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLT 160 (272)
T ss_dssp GTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCC
Confidence 34444455555555555544444455555555555555555544444455555555555555555544444445555555
Q ss_pred EEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccc
Q 002155 393 KLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKL 449 (959)
Q Consensus 393 ~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 449 (959)
+|++++|++++..+..|.++++|++|++++|++++..+..+..+++|+.|++++|++
T Consensus 161 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (272)
T 3rfs_A 161 ELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 217 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCc
Confidence 555555555544444445555555555555555544444444444454444444444
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=223.78 Aligned_cols=211 Identities=26% Similarity=0.272 Sum_probs=130.2
Q ss_pred ccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCC
Q 002155 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQ 260 (959)
Q Consensus 181 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 260 (959)
+..+++|+.|++++|.++. + ..+..+++|++|++++|.+++. ..+..+++|++|+|++|++++..+..|..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 3445555555555555552 1 2355555555555555555532 2455555555666655555555555555555555
Q ss_pred eeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCC
Q 002155 261 CLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRL 340 (959)
Q Consensus 261 ~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l 340 (959)
+|+|++|++++ ..+..++.+++|+.|++++|++++..+..|..+
T Consensus 113 ~L~L~~n~l~~------------------------------------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 156 (272)
T 3rfs_A 113 ELVLVENQLQS------------------------------------LPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKL 156 (272)
T ss_dssp EEECTTSCCCC------------------------------------CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred EEECCCCcCCc------------------------------------cCHHHhccCCCCCEEECCCCccCccCHHHhccC
Confidence 55555555431 223334455555555555555555556666777
Q ss_pred CCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCccccccccc
Q 002155 341 TNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDL 420 (959)
Q Consensus 341 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 420 (959)
++|++|++++|++++..+..|..+++|+.|++++|++++..+..+..+++|++|++++|.+.+ .+++|++|++
T Consensus 157 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~ 229 (272)
T 3rfs_A 157 TNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSE 229 (272)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHH
T ss_pred ccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHH
Confidence 777777777777776666667777777777777777776666667777777777777777653 2456777777
Q ss_pred CCccccCCCchhhhcccc
Q 002155 421 SFNELDGQLPSSLSNILN 438 (959)
Q Consensus 421 ~~N~l~~~~~~~l~~l~~ 438 (959)
+.|.+++.+|..++.+..
T Consensus 230 ~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 230 WINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp HHHHTGGGBBCTTSCBCG
T ss_pred HHHhCCCcccCcccccCC
Confidence 777777777777666554
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-22 Score=211.36 Aligned_cols=205 Identities=17% Similarity=0.159 Sum_probs=120.1
Q ss_pred ccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCc-CCCCCCcccCCCCCCcEEEccC-ccccccCCc
Q 002155 31 SGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNF-LSGSIPRELCTSESLEEIDLDG-NLLTGTIEG 108 (959)
Q Consensus 31 ~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~-l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~~~ 108 (959)
.+.+|. +.. .|++|+|++|++.+..+..|.++++|++|+|++|+ +++..+..|..+++|++|++++ |+++++.+.
T Consensus 23 l~~ip~-~~~--~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~ 99 (239)
T 2xwt_C 23 IQRIPS-LPP--STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPD 99 (239)
T ss_dssp CSSCCC-CCT--TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTT
T ss_pred ccccCC-CCC--cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHH
Confidence 445555 333 56666666666664444456666666666666665 5544444566666666666666 666655556
Q ss_pred ccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCccccccccee---EEEcccc-ccccccCccccCC
Q 002155 109 VFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLM---EFSAANN-LLEGSLPYEVGNA 184 (959)
Q Consensus 109 ~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~---~L~l~~n-~l~~~~~~~~~~l 184 (959)
.|.++++|++|++++|.+.+ +|. +..+++|+ +|++++| .+++..+..|.++
T Consensus 100 ~f~~l~~L~~L~l~~n~l~~-lp~------------------------~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l 154 (239)
T 2xwt_C 100 ALKELPLLKFLGIFNTGLKM-FPD------------------------LTKVYSTDIFFILEITDNPYMTSIPVNAFQGL 154 (239)
T ss_dssp SEECCTTCCEEEEEEECCCS-CCC------------------------CTTCCBCCSEEEEEEESCTTCCEECTTTTTTT
T ss_pred HhCCCCCCCEEeCCCCCCcc-ccc------------------------cccccccccccEEECCCCcchhhcCcccccch
Confidence 66666666666666666554 333 33334443 5555555 5554444556666
Q ss_pred cCCc-eEeccCCcccccCCccccCCCCCCEEEccCCc-CCccCCccccCC-CCCCEEEcccccCCCCCchhhhcccCCCe
Q 002155 185 AALE-RLVLTNNMLKGHLPKEIGNLSALSVLDLNSNL-FDGIIPYELGDC-ISLTTLDLGNNNLSGLIPEKIADLAQLQC 261 (959)
Q Consensus 185 ~~L~-~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 261 (959)
++|+ +|++++|+++...+..|.. ++|+.|+|++|+ ++.+.+..|..+ ++|++|++++|+++.+.+. .+++|+.
T Consensus 155 ~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~ 230 (239)
T 2xwt_C 155 CNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKE 230 (239)
T ss_dssp BSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSE
T ss_pred hcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCce
Confidence 6666 6666666666333333333 666667777663 665556666666 6677777777776654333 4566666
Q ss_pred eEcccc
Q 002155 262 LVLSHN 267 (959)
Q Consensus 262 L~Ls~N 267 (959)
|+++++
T Consensus 231 L~l~~~ 236 (239)
T 2xwt_C 231 LIARNT 236 (239)
T ss_dssp EECTTC
T ss_pred eeccCc
Confidence 666654
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.7e-23 Score=223.56 Aligned_cols=225 Identities=21% Similarity=0.217 Sum_probs=156.1
Q ss_pred cccEEEccCCcCcccCCc---cccCCCCCCEEEccCCCCCCCCCCCc--CCCCcceEEEeeCcccCCccc----cccccC
Q 002155 318 VVVDLLLNNNMLSGKIPG---SLSRLTNLTTLDLSRNQLTGPIPSEF--GDSIKLQGLYLGNNQLTGSIP----WSLGSL 388 (959)
Q Consensus 318 ~L~~L~L~~n~i~~~~~~---~~~~l~~L~~L~Ls~n~l~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~----~~~~~l 388 (959)
.++.+.+.++.++..... .+..+++|++|++++|.+.+..|..+ ..+++|++|++++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 355666666665422111 12234678999999999888888877 888899999999999886544 344578
Q ss_pred CCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCC--C--chhhhcccccceEeeccccccCCcccc---ccchh
Q 002155 389 GGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQ--L--PSSLSNILNLVGLYLQHNKLSGPVDEL---FSNSA 461 (959)
Q Consensus 389 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~--~--~~~l~~l~~L~~L~L~~N~l~~~~~~~---~~~~~ 461 (959)
++|++|+|++|++.+..+..|.++++|++|+|++|++.+. . +..+..+++|++|++++|+++.++... +...
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l- 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAG- 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHT-
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcC-
Confidence 8999999999999888888888999999999999987642 1 233467888999999999887654431 2221
Q ss_pred hhhhceeccCCcccCCCCCccccCc---cccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCcc
Q 002155 462 AWKIATMNMSNNLFDGGLPRSLGNL---SYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLL 538 (959)
Q Consensus 462 ~~~l~~L~ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 538 (959)
.+|+.|++++|.+++..|..+..+ ++|++|+|++|+++ .+|..+. ++|++|+|++|+|++. |. +..+++|+
T Consensus 224 -~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 224 -VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp -CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred -CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 256666666666666656655555 47777777777776 5566554 5777777777777653 32 56667777
Q ss_pred EEecccCcCcc
Q 002155 539 YLSLAENRLEG 549 (959)
Q Consensus 539 ~L~l~~N~l~~ 549 (959)
.|++++|+++.
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 77777776653
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-22 Score=211.36 Aligned_cols=197 Identities=15% Similarity=0.162 Sum_probs=146.6
Q ss_pred CCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCcc-ccccCCcccccCCCCceeeecccccccccCcccCCCcccEEecc
Q 002155 67 MLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNL-LTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLD 145 (959)
Q Consensus 67 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls 145 (959)
+|++|+|++|++++..+..|..+++|++|++++|+ ++.+.+..|.++++|++|+ ++
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~-----------------------l~ 88 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIE-----------------------IR 88 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEE-----------------------EE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEE-----------------------CC
Confidence 55666666666654444455555666666666664 5555555555555555555 45
Q ss_pred C-CccccccCcccccccceeEEEccccccccccCccccCCcCCc---eEeccCC-cccccCCccccCCCCCC-EEEccCC
Q 002155 146 S-NNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALE---RLVLTNN-MLKGHLPKEIGNLSALS-VLDLNSN 219 (959)
Q Consensus 146 ~-n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~---~L~L~~n-~i~~~~~~~~~~l~~L~-~L~L~~N 219 (959)
+ |+++++.+..|.++++|++|++++|.+++ +|. |..+++|+ +|++++| .+++..+..|.++++|+ +|++++|
T Consensus 89 ~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n 166 (239)
T 2xwt_C 89 NTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNN 166 (239)
T ss_dssp EETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSC
T ss_pred CCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCC
Confidence 4 55555566677788888888888888884 665 88999998 9999999 99987778899999999 9999999
Q ss_pred cCCccCCccccCCCCCCEEEccccc-CCCCCchhhhcc-cCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccc
Q 002155 220 LFDGIIPYELGDCISLTTLDLGNNN-LSGLIPEKIADL-AQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGV 297 (959)
Q Consensus 220 ~i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~ 297 (959)
.++.+.+..|.. ++|++|+|++|+ ++.+.+..|..+ ++|+.|++++|++++..+. .+.+++.
T Consensus 167 ~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---------------~~~~L~~ 230 (239)
T 2xwt_C 167 GFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---------------GLEHLKE 230 (239)
T ss_dssp CCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---------------TCTTCSE
T ss_pred CCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---------------HhccCce
Confidence 999666656666 899999999995 998888899999 9999999999999742221 3456777
Q ss_pred eecCCCc
Q 002155 298 FDLSYNR 304 (959)
Q Consensus 298 l~L~~n~ 304 (959)
|+++++.
T Consensus 231 L~l~~~~ 237 (239)
T 2xwt_C 231 LIARNTW 237 (239)
T ss_dssp EECTTC-
T ss_pred eeccCcc
Confidence 8887653
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-24 Score=239.38 Aligned_cols=128 Identities=20% Similarity=0.194 Sum_probs=58.8
Q ss_pred eccCCccccccCcccccccceeEEEccccccccccC----ccccCCc-CCceEeccCCcccccCCccccCC-----CCCC
Q 002155 143 DLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLP----YEVGNAA-ALERLVLTNNMLKGHLPKEIGNL-----SALS 212 (959)
Q Consensus 143 ~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~----~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l-----~~L~ 212 (959)
++++|++++.+|..+...++|++|++++|.+++..+ ..|.+++ +|++|+|++|.|++..+..|..+ ++|+
T Consensus 4 ~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 83 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVT 83 (362)
T ss_dssp ECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCC
T ss_pred ccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCcc
Confidence 344444444444333333334444444444443333 3444444 55555555555554444444443 5555
Q ss_pred EEEccCCcCCccCCccccC----C-CCCCEEEcccccCCCCCchhhhc-----ccCCCeeEcccccCC
Q 002155 213 VLDLNSNLFDGIIPYELGD----C-ISLTTLDLGNNNLSGLIPEKIAD-----LAQLQCLVLSHNNLS 270 (959)
Q Consensus 213 ~L~L~~N~i~~~~~~~~~~----l-~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~ 270 (959)
+|+|++|.++...+..+.. + ++|++|+|++|++++..+..+.. .++|++|+|++|.++
T Consensus 84 ~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 84 SLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp EEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred EEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 5555555555444433222 2 45555555555555444433332 135555555555443
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.88 E-value=5.6e-24 Score=239.47 Aligned_cols=241 Identities=20% Similarity=0.233 Sum_probs=193.8
Q ss_pred cCCCcccCCCccccEEecCCCccccc----CCcCccCCCCCcEEEcCCCcC---CCCCCccc-------CCCCCCcEEEc
Q 002155 32 GSLPSWLGNWNQMESLLLSSNQFIGK----IPPEIGNCSMLKSISLSNNFL---SGSIPREL-------CTSESLEEIDL 97 (959)
Q Consensus 32 ~~lp~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~Ls~n~l---~~~~p~~~-------~~l~~L~~L~L 97 (959)
..++..+..++.|++|+|++|++... ++..+..+++|++|+|++|.+ ++.+|..+ ..+++|++|+|
T Consensus 22 ~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~L 101 (386)
T 2ca6_A 22 KSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRL 101 (386)
T ss_dssp HTTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEEC
T ss_pred HHHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEEC
Confidence 46778888889999999999999865 445588999999999999644 44556555 78899999999
Q ss_pred cCccccc----cCCcccccCCCCceeeecccccccccCcccCC--------------CcccEEeccCCccc-cccC---c
Q 002155 98 DGNLLTG----TIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSK--------------LPLMVLDLDSNNFT-GIIP---V 155 (959)
Q Consensus 98 ~~n~l~~----~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~--------------~~L~~L~ls~n~l~-~~~p---~ 155 (959)
++|.++. .++..+..+++|++|+|++|.+....+..+.. .+|++|++++|+++ ...| .
T Consensus 102 s~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 181 (386)
T 2ca6_A 102 SDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAK 181 (386)
T ss_dssp CSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHH
Confidence 9999997 46778899999999999999997554443332 46999999999997 3444 3
Q ss_pred ccccccceeEEEcccccccc-----ccCccccCCcCCceEeccCCccc----ccCCccccCCCCCCEEEccCCcCCcc--
Q 002155 156 SIWNSETLMEFSAANNLLEG-----SLPYEVGNAAALERLVLTNNMLK----GHLPKEIGNLSALSVLDLNSNLFDGI-- 224 (959)
Q Consensus 156 ~~~~~~~L~~L~l~~n~l~~-----~~~~~~~~l~~L~~L~L~~n~i~----~~~~~~~~~l~~L~~L~L~~N~i~~~-- 224 (959)
.+..+++|++|++++|.++. ..|..+..+++|++|+|++|.|+ ..+|..+..+++|++|+|++|.|+..
T Consensus 182 ~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 261 (386)
T 2ca6_A 182 TFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGA 261 (386)
T ss_dssp HHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHH
T ss_pred HHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhH
Confidence 56678899999999998873 34447888999999999999995 46778888999999999999999865
Q ss_pred --CCcccc--CCCCCCEEEcccccCCC----CCchhh-hcccCCCeeEcccccCCCC
Q 002155 225 --IPYELG--DCISLTTLDLGNNNLSG----LIPEKI-ADLAQLQCLVLSHNNLSGP 272 (959)
Q Consensus 225 --~~~~~~--~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~Ls~N~l~~~ 272 (959)
++..+. .+++|++|+|++|+++. .+|..+ .++++|+.|+|++|++++.
T Consensus 262 ~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 262 AAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp HHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 456663 38899999999999987 356666 6689999999999988753
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.7e-24 Score=236.31 Aligned_cols=224 Identities=21% Similarity=0.206 Sum_probs=130.1
Q ss_pred EecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCC----cccCCCC-CCcEEEccCccccccCCcccccC-----CCC
Q 002155 47 LLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIP----RELCTSE-SLEEIDLDGNLLTGTIEGVFEKC-----SNL 116 (959)
Q Consensus 47 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p----~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l-----~~L 116 (959)
++|++|++.+.+|..+...++|++|||++|.+++..+ ..|..++ +|++|+|++|++++..+..|..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566666666666655555557777777777665444 5566666 67777777776666555555554 666
Q ss_pred ceeeecccccccccCcccCC------CcccEEeccCCccccccCccccc-----ccceeEEEccccccccc----cCccc
Q 002155 117 SQLVIFRNHIYGSIPEYLSK------LPLMVLDLDSNNFTGIIPVSIWN-----SETLMEFSAANNLLEGS----LPYEV 181 (959)
Q Consensus 117 ~~L~L~~n~~~~~~p~~~~~------~~L~~L~ls~n~l~~~~p~~~~~-----~~~L~~L~l~~n~l~~~----~~~~~ 181 (959)
++|+|++|.+.+..+..+.. .+|++|++++|++++..+..+.. .++|++|++++|.+++. ++..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 66666666665544442221 24666666666666554444332 24566666666666532 23333
Q ss_pred cCCc-CCceEeccCCcccccCCcccc----CC-CCCCEEEccCCcCCcc----CCccccC-CCCCCEEEcccccCCCCCc
Q 002155 182 GNAA-ALERLVLTNNMLKGHLPKEIG----NL-SALSVLDLNSNLFDGI----IPYELGD-CISLTTLDLGNNNLSGLIP 250 (959)
Q Consensus 182 ~~l~-~L~~L~L~~n~i~~~~~~~~~----~l-~~L~~L~L~~N~i~~~----~~~~~~~-l~~L~~L~L~~N~l~~~~~ 250 (959)
..++ +|++|+|++|+|++..+..+. .+ ++|++|+|++|.|+.. ++..+.. .++|++|+|++|++++..+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 4444 677777777777655544333 33 4677777777776642 3334444 3467777777777765544
Q ss_pred hh----hhcccCCCeeEcccccCC
Q 002155 251 EK----IADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 251 ~~----~~~l~~L~~L~Ls~N~l~ 270 (959)
.. +..+++|+.|+|++|.+.
T Consensus 243 ~~l~~~~~~l~~L~~L~L~~n~l~ 266 (362)
T 3goz_A 243 ENLKLLKDSLKHLQTVYLDYDIVK 266 (362)
T ss_dssp HHHHHTTTTTTTCSEEEEEHHHHT
T ss_pred HHHHHHHhcCCCccEEEeccCCcc
Confidence 32 345566777777766643
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-21 Score=206.57 Aligned_cols=184 Identities=23% Similarity=0.254 Sum_probs=146.7
Q ss_pred CCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCccccccccc
Q 002155 341 TNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDL 420 (959)
Q Consensus 341 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 420 (959)
...++++++++.++. +|..+. ++++.|++++|.+++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 356788888888884 454443 57888888888888777777888888888888888888777777888888888888
Q ss_pred CCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeecccccc
Q 002155 421 SFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFT 500 (959)
Q Consensus 421 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 500 (959)
++|++++..+..|..+++|+.|+|++|+|+++++ ..|..+++|++|+|++|+++
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--------------------------~~~~~l~~L~~L~Ls~N~l~ 144 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPS--------------------------GVFDRLTKLKELRLNTNQLQ 144 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT--------------------------TTTTTCTTCCEEECCSSCCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcCh--------------------------hHhccCCcccEEECcCCcCC
Confidence 8888887666777788888888888877775443 34556788999999999998
Q ss_pred ccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCC
Q 002155 501 GEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPR 553 (959)
Q Consensus 501 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 553 (959)
+..+..|..+++|++|+|++|+|++..+..+..+++|+.|++++|++.+....
T Consensus 145 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 197 (251)
T 3m19_A 145 SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCE 197 (251)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTSTT
T ss_pred ccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCccc
Confidence 66666788899999999999999987777888899999999999999877444
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-22 Score=217.40 Aligned_cols=194 Identities=19% Similarity=0.280 Sum_probs=132.2
Q ss_pred CCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCce
Q 002155 39 GNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQ 118 (959)
Q Consensus 39 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 118 (959)
.++++|++|++++|++. .+| .+..+++|++|+|++|++++ ++. +..+++|++|++++|++++. ..+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 45666777777777766 344 46677777777777777763 333 66677777777777776653 24566666666
Q ss_pred eeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCccc
Q 002155 119 LVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLK 198 (959)
Q Consensus 119 L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 198 (959)
|++++|.+. +.. .+..+++|++|++++|.+++..+ +..+++|++|+|++|.++
T Consensus 112 L~l~~n~l~-----------------------~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 164 (308)
T 1h6u_A 112 LDLTSTQIT-----------------------DVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVS 164 (308)
T ss_dssp EECTTSCCC-----------------------CCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred EECCCCCCC-----------------------Cch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCC
Confidence 666555554 321 15556666666666666653322 777788888888888887
Q ss_pred ccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCC
Q 002155 199 GHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSG 271 (959)
Q Consensus 199 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 271 (959)
+.. . +..+++|+.|++++|.+++..+ +..+++|++|+|++|++++.. .+..+++|+.|+|++|++++
T Consensus 165 ~~~-~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 165 DLT-P-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCG-G-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred CCh-h-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 533 3 7888888888888888875443 778888888888888888664 37888888888888888763
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-22 Score=218.74 Aligned_cols=85 Identities=27% Similarity=0.307 Sum_probs=49.6
Q ss_pred ccCCCCCCEEEccCCCCCCCCCCCcCCC---CcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcc
Q 002155 337 LSRLTNLTTLDLSRNQLTGPIPSEFGDS---IKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLK 413 (959)
Q Consensus 337 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~ 413 (959)
+..+++|++|+|++|++++..|..+..+ ++|++|++++|+++ .+|..+. ++|++|+|++|+|++. |. +..++
T Consensus 220 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~ 294 (310)
T 4glp_A 220 AAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELP 294 (310)
T ss_dssp HHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCC
T ss_pred HhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCC
Confidence 4556677777777777766555555444 46666666666666 3444442 4666666666666543 22 45555
Q ss_pred cccccccCCcccc
Q 002155 414 ELTHLDLSFNELD 426 (959)
Q Consensus 414 ~L~~L~L~~N~l~ 426 (959)
+|++|+|++|+++
T Consensus 295 ~L~~L~L~~N~l~ 307 (310)
T 4glp_A 295 EVDNLTLDGNPFL 307 (310)
T ss_dssp CCSCEECSSTTTS
T ss_pred CccEEECcCCCCC
Confidence 6666666666654
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.87 E-value=8.9e-23 Score=225.21 Aligned_cols=254 Identities=15% Similarity=0.228 Sum_probs=200.4
Q ss_pred ccccEEecCCCcccccCCcCccCC--CCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCcccccc-CCcccccCCCCce
Q 002155 42 NQMESLLLSSNQFIGKIPPEIGNC--SMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGT-IEGVFEKCSNLSQ 118 (959)
Q Consensus 42 ~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~ 118 (959)
..++.|+++++++. |..+..+ ++++.|++++|.+.+.++. +..+++|++|++++|.+++. .+..+..+++|++
T Consensus 47 ~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 47 SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 34889999999876 5667777 8999999999999976665 66799999999999999865 7788999999999
Q ss_pred eeecccccccccCcccCCC-cccEEeccCC-ccccc-cCcccccccceeEEEcccc-ccccc-cCccccCCc-CCceEec
Q 002155 119 LVIFRNHIYGSIPEYLSKL-PLMVLDLDSN-NFTGI-IPVSIWNSETLMEFSAANN-LLEGS-LPYEVGNAA-ALERLVL 192 (959)
Q Consensus 119 L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n-~l~~~-~p~~~~~~~~L~~L~l~~n-~l~~~-~~~~~~~l~-~L~~L~L 192 (959)
|+|++|.+.+..|..+... +|++|++++| .+++. .+..+..+++|++|++++| .+++. ++..+..++ +|++|+|
T Consensus 123 L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l 202 (336)
T 2ast_B 123 LSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNL 202 (336)
T ss_dssp EECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEEC
T ss_pred EeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEe
Confidence 9999999887777777666 5999999999 67763 6666888999999999999 88854 577788899 9999999
Q ss_pred cCC--ccc-ccCCccccCCCCCCEEEccCCc-CCccCCccccCCCCCCEEEccccc-CCCCCchhhhcccCCCeeEcccc
Q 002155 193 TNN--MLK-GHLPKEIGNLSALSVLDLNSNL-FDGIIPYELGDCISLTTLDLGNNN-LSGLIPEKIADLAQLQCLVLSHN 267 (959)
Q Consensus 193 ~~n--~i~-~~~~~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N 267 (959)
++| .++ +.++..+..+++|++|++++|. ++...+..+..+++|++|++++|. +.......++.+++|+.|++++|
T Consensus 203 ~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 203 SGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 999 454 3566777889999999999998 776777788899999999999985 33222236788899999999988
Q ss_pred cCCCCCCCCCcchhhccCCCCcccc-ccccceecCCCcCCCCCCcccCC
Q 002155 268 NLSGPIPSKPSSYFRQANMPDLSFI-QHHGVFDLSYNRLSGPIPEELGS 315 (959)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~l~~l-~~L~~l~L~~n~l~~~~p~~~~~ 315 (959)
++. ..+..+ .++..|++++|.+++..|..++.
T Consensus 283 -i~~---------------~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 283 -VPD---------------GTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp -SCT---------------TCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred -cCH---------------HHHHHHHhhCcceEEecccCccccCCcccc
Confidence 431 112222 33566777777777776666554
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.86 E-value=8.5e-22 Score=218.08 Aligned_cols=188 Identities=19% Similarity=0.110 Sum_probs=86.3
Q ss_pred cCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCC-cccCCCCCCcE-EEccCccccccCCcc
Q 002155 32 GSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIP-RELCTSESLEE-IDLDGNLLTGTIEGV 109 (959)
Q Consensus 32 ~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~-L~L~~n~l~~~~~~~ 109 (959)
+++|..+. +.+++|+|++|++....+.+|.++++|++|+|++|++.+.+| ..|.++++|++ +.+++|+++.+.++.
T Consensus 22 t~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~ 99 (350)
T 4ay9_X 22 TEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEA 99 (350)
T ss_dssp CSCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTS
T ss_pred CccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchh
Confidence 35555442 345555555555553233345555555555555555543333 34455555443 344445555555555
Q ss_pred cccCCCCceeeecccccccccCccc-CCCcccEEeccC-CccccccCccccccc-ceeEEEccccccccccCccccCCcC
Q 002155 110 FEKCSNLSQLVIFRNHIYGSIPEYL-SKLPLMVLDLDS-NNFTGIIPVSIWNSE-TLMEFSAANNLLEGSLPYEVGNAAA 186 (959)
Q Consensus 110 ~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~-n~l~~~~p~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~ 186 (959)
|..+++|++|++++|.+....+..+ ..+++..|++++ +++..+.+..|..+. .++.|++++|+|+ .+|.......+
T Consensus 100 f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~ 178 (350)
T 4ay9_X 100 FQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQ 178 (350)
T ss_dssp BCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEE
T ss_pred hhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccc
Confidence 5555555555555555554433322 222344555533 334433333444332 3444455555444 22222223334
Q ss_pred CceEeccC-CcccccCCccccCCCCCCEEEccCCcCC
Q 002155 187 LERLVLTN-NMLKGHLPKEIGNLSALSVLDLNSNLFD 222 (959)
Q Consensus 187 L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~L~~N~i~ 222 (959)
|++|++++ |.++...+.+|.++++|++|+|++|+|+
T Consensus 179 L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 179 LDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp EEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred hhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 44444442 3344222234444444444444444444
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.86 E-value=7.5e-24 Score=238.44 Aligned_cols=255 Identities=21% Similarity=0.270 Sum_probs=160.9
Q ss_pred ccCccccCCcCCceEeccCCcccccCC----ccccCCCCCCEEEccCCcC---CccCCccc-------cCCCCCCEEEcc
Q 002155 176 SLPYEVGNAAALERLVLTNNMLKGHLP----KEIGNLSALSVLDLNSNLF---DGIIPYEL-------GDCISLTTLDLG 241 (959)
Q Consensus 176 ~~~~~~~~l~~L~~L~L~~n~i~~~~~----~~~~~l~~L~~L~L~~N~i---~~~~~~~~-------~~l~~L~~L~L~ 241 (959)
.++..+..+++|++|+|++|.|++..+ ..+..+++|++|+|++|.+ ++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 344555566666666666666665433 3355666677777766433 33334333 566777777777
Q ss_pred cccCCC----CCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcc
Q 002155 242 NNNLSG----LIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCV 317 (959)
Q Consensus 242 ~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~ 317 (959)
+|+++. .++..+..+++|++|+|++|.++...+..... .+..+ ..|.+.+ ..+
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~--------~l~~l--------~~~~~~~-------~~~ 159 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIAR--------ALQEL--------AVNKKAK-------NAP 159 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHH--------HHHHH--------HHHHHHH-------TCC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHH--------HHHHH--------hhhhhcc-------cCC
Confidence 777765 34556667777777777777654110000000 00000 0000000 004
Q ss_pred cccEEEccCCcCc-ccCC---ccccCCCCCCEEEccCCCCCC-----CCCCCcCCCCcceEEEeeCcccC----Cccccc
Q 002155 318 VVVDLLLNNNMLS-GKIP---GSLSRLTNLTTLDLSRNQLTG-----PIPSEFGDSIKLQGLYLGNNQLT----GSIPWS 384 (959)
Q Consensus 318 ~L~~L~L~~n~i~-~~~~---~~~~~l~~L~~L~Ls~n~l~~-----~~~~~~~~l~~L~~L~L~~n~l~----~~~~~~ 384 (959)
+|+.|++++|+++ ...+ ..+..+++|++|++++|+++. ..+..+..+++|+.|+|++|.++ ..+|..
T Consensus 160 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~ 239 (386)
T 2ca6_A 160 PLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 239 (386)
T ss_dssp CCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH
T ss_pred CCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHH
Confidence 5556666666654 2233 456677888888888888772 34446777888888888888885 466777
Q ss_pred cccCCCCcEEEccCCcCCCC----CCCcc--CCcccccccccCCccccC----CCchhh-hcccccceEeeccccccCCc
Q 002155 385 LGSLGGLVKLNLTGNKLSGK----VPTSF--GNLKELTHLDLSFNELDG----QLPSSL-SNILNLVGLYLQHNKLSGPV 453 (959)
Q Consensus 385 ~~~l~~L~~L~L~~N~i~~~----~~~~~--~~l~~L~~L~L~~N~l~~----~~~~~l-~~l~~L~~L~L~~N~l~~~~ 453 (959)
+..+++|++|+|++|+|++. ++..+ +.+++|++|+|++|.+++ .+|..+ .++++|+.|++++|++++..
T Consensus 240 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 240 LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp GGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 88888899999999988754 34555 347889999999999886 367666 66899999999999988765
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-22 Score=224.25 Aligned_cols=149 Identities=14% Similarity=0.151 Sum_probs=64.9
Q ss_pred CcEEEcCCCcCCCCCCcccCCC--CCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEecc
Q 002155 68 LKSISLSNNFLSGSIPRELCTS--ESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLD 145 (959)
Q Consensus 68 L~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls 145 (959)
++.|++++|.+. |..+..+ ++++.|++++|.+.+..+. +..+++|+ +|+++
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~-----------------------~L~L~ 101 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQ-----------------------HMDLS 101 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCC-----------------------EEECT
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCC-----------------------EEEcc
Confidence 556666666554 3344444 5555555555555543333 22334444 44444
Q ss_pred CCccccc-cCcccccccceeEEEccccccccccCccccCCcCCceEeccCC-ccccc-CCccccCCCCCCEEEccCC-cC
Q 002155 146 SNNFTGI-IPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNN-MLKGH-LPKEIGNLSALSVLDLNSN-LF 221 (959)
Q Consensus 146 ~n~l~~~-~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n-~i~~~-~~~~~~~l~~L~~L~L~~N-~i 221 (959)
+|++++. .|..+..+++|++|++++|.+++..+..++.+++|++|+|++| .+++. ++..+.++++|++|++++| .+
T Consensus 102 ~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l 181 (336)
T 2ast_B 102 NSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDF 181 (336)
T ss_dssp TCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTC
T ss_pred CCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCc
Confidence 4443332 3333333444444444444444334444444444444444444 33321 2333444444444444444 44
Q ss_pred Ccc-CCccccCCC-CCCEEEcccc
Q 002155 222 DGI-IPYELGDCI-SLTTLDLGNN 243 (959)
Q Consensus 222 ~~~-~~~~~~~l~-~L~~L~L~~N 243 (959)
++. ++..+..++ +|++|+|++|
T Consensus 182 ~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 182 TEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp CHHHHHHHHHHSCTTCCEEECCSC
T ss_pred ChHHHHHHHHhcccCCCEEEeCCC
Confidence 322 233344444 4444444444
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-21 Score=210.87 Aligned_cols=194 Identities=22% Similarity=0.274 Sum_probs=148.3
Q ss_pred CccchhhhhhcCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEE
Q 002155 17 DLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEID 96 (959)
Q Consensus 17 ~~~~~~~~~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 96 (959)
.++.++.++..++-+..+| .+..+++|++|+|++|++. .++. +..+++|++|+|++|++++ ++ .+..+++|++|+
T Consensus 39 ~l~~L~~L~l~~~~i~~l~-~~~~l~~L~~L~L~~n~i~-~~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~ 113 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQIT-DLAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLD 113 (308)
T ss_dssp HHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEE
T ss_pred HcCCcCEEEeeCCCccCch-hhhccCCCCEEEccCCcCC-CChh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEE
Confidence 4666777777777777787 6899999999999999998 4555 9999999999999999984 44 699999999999
Q ss_pred ccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccc
Q 002155 97 LDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGS 176 (959)
Q Consensus 97 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~ 176 (959)
+++|++++.. .+..+++|++|++++|.+.+..+ +..+++|++|++++|.+++
T Consensus 114 l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~-------------------------l~~l~~L~~L~l~~n~l~~- 165 (308)
T 1h6u_A 114 LTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP-------------------------LAGLTNLQYLSIGNAQVSD- 165 (308)
T ss_dssp CTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG-------------------------GGGCTTCCEEECCSSCCCC-
T ss_pred CCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc-------------------------ccCCCCccEEEccCCcCCC-
Confidence 9999999754 38888888888888887764332 3444555555555555553
Q ss_pred cCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCC
Q 002155 177 LPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGL 248 (959)
Q Consensus 177 ~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 248 (959)
++. +..+++|+.|+|++|.+++..+ +..+++|++|+|++|.+++.. .+..+++|++|+|++|+++..
T Consensus 166 ~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 166 LTP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEECC
T ss_pred Chh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeecC
Confidence 222 6677777777777777775332 777888888888888887544 377788888888888888754
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.86 E-value=6.3e-21 Score=200.53 Aligned_cols=180 Identities=18% Similarity=0.148 Sum_probs=127.1
Q ss_pred cccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeec
Q 002155 43 QMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIF 122 (959)
Q Consensus 43 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 122 (959)
..++++++++++. .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3556677777666 5665544 467777777777776666666777777777777777776666666666666666666
Q ss_pred ccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCC
Q 002155 123 RNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLP 202 (959)
Q Consensus 123 ~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 202 (959)
+|.+.+. .+..|..+++|++|++++|++++..+..|..+++|++|+|++|+|++..+
T Consensus 92 ~n~l~~~-----------------------~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 148 (251)
T 3m19_A 92 NNQLASL-----------------------PLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPA 148 (251)
T ss_dssp TSCCCCC-----------------------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCccccc-----------------------ChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCH
Confidence 5555543 34444555556666666666654555557778888888888888887666
Q ss_pred ccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCC
Q 002155 203 KEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGL 248 (959)
Q Consensus 203 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 248 (959)
..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++...
T Consensus 149 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 149 GAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 6788888889999999988877777888888899999999988754
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-22 Score=214.73 Aligned_cols=152 Identities=16% Similarity=0.115 Sum_probs=121.5
Q ss_pred HHHHHHhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccch------------------hhHHHHHHHHHHHhcCC
Q 002155 672 VHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKT------------------QGHREFTAEMETLGKVK 733 (959)
Q Consensus 672 ~~~~~~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~ 733 (959)
..+......|.+.+.||+|+||.||+|++.+|+.||+|+++.... .....+.+|+.++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 334445566777899999999999999997799999999864321 13456889999999999
Q ss_pred CCceeccccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCE
Q 002155 734 HQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNI 813 (959)
Q Consensus 734 h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 813 (959)
| +++++++.. +..++||||++||+|.+ +.. .....++.|++.|++||| +.||+||||||+||
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NI 224 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNV 224 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSE
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHE
Confidence 5 777776543 56799999999999988 421 123479999999999999 89999999999999
Q ss_pred EECCCCcEEEcccccccccccccccccccccccccccCCCcCC
Q 002155 814 LLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQ 856 (959)
Q Consensus 814 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 856 (959)
+++ ++.+||+|||+++. +..|+|||++.
T Consensus 225 Ll~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 225 LVS-EEGIWIIDFPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp EEE-TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred EEE-CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence 999 99999999999853 33567888754
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.5e-21 Score=211.54 Aligned_cols=241 Identities=20% Similarity=0.177 Sum_probs=144.3
Q ss_pred ceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCC-CCCCcCCCCcceE-EEeeC
Q 002155 297 VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGP-IPSEFGDSIKLQG-LYLGN 374 (959)
Q Consensus 297 ~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~-L~L~~ 374 (959)
+++.++++++ .+|..+ .+++++|+|++|+|+.+.+++|.++++|++|+|++|++.+. .+.+|.+++++++ +.+++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4566666666 455544 24677788888888777777788888888888888877543 3456777776654 55666
Q ss_pred cccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCC-ccccCCCchhhhccc-ccceEeeccccccCC
Q 002155 375 NQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSF-NELDGQLPSSLSNIL-NLVGLYLQHNKLSGP 452 (959)
Q Consensus 375 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~ 452 (959)
|+++...|..|..+++|++|++++|+++...+..+....++..|++.+ |++....+..|..+. .++.|++++|+|+.+
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i 169 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI 169 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCC
Confidence 777766677777777788888888777766666666666677777754 456544445555553 466677777777665
Q ss_pred ccccccchhhhhhceeccCCcccCCCCCccccCccccceeeecc-ccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccc
Q 002155 453 VDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHE-NKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETM 531 (959)
Q Consensus 453 ~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 531 (959)
++.+|. .++|++|++++ |.++...+..|..+++|++|||++|+|+...+..+
T Consensus 170 ~~~~f~---------------------------~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~ 222 (350)
T 4ay9_X 170 HNSAFN---------------------------GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL 222 (350)
T ss_dssp CTTSST---------------------------TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC
T ss_pred Chhhcc---------------------------ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh
Confidence 555443 34555555553 44442222345556666666666666654333333
Q ss_pred cCCCCccEEecccC-cCcccCCCCcccCCCccccccCCCCCC
Q 002155 532 CSLSNLLYLSLAEN-RLEGMVPRSGICQNLSKISLTGNKDLC 572 (959)
Q Consensus 532 ~~l~~L~~L~l~~N-~l~~~~~~~~~~~~l~~l~l~~N~~~c 572 (959)
.+ |+.|.+.++ .++.+ |....+.+|+.+++. |++.|
T Consensus 223 ~~---L~~L~~l~~~~l~~l-P~l~~l~~L~~l~l~-~~~~c 259 (350)
T 4ay9_X 223 EN---LKKLRARSTYNLKKL-PTLEKLVALMEASLT-YPSHC 259 (350)
T ss_dssp TT---CCEEECTTCTTCCCC-CCTTTCCSCCEEECS-CHHHH
T ss_pred cc---chHhhhccCCCcCcC-CCchhCcChhhCcCC-CCccc
Confidence 33 333333222 23333 334445556655553 44555
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.5e-21 Score=221.02 Aligned_cols=188 Identities=26% Similarity=0.309 Sum_probs=116.9
Q ss_pred cccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeec
Q 002155 43 QMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIF 122 (959)
Q Consensus 43 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 122 (959)
+|+.|+|++|++.+ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|+++ |. |.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~i-p~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLSTL-PE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCC-CC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCCc-ch-hhc--CCCEEECC
Confidence 78888888888774 776653 77888888888887 566 3467888888888888863 33 544 77777777
Q ss_pred ccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCC
Q 002155 123 RNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLP 202 (959)
Q Consensus 123 ~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 202 (959)
+|.+.+ +|. ...+|++|++++|++++ +|. .+++|++|++++|.+++ +|. |. ++|+.|+|++|+|+ .+|
T Consensus 129 ~N~l~~-lp~--~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 129 NNQLTM-LPE--LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SSCCSC-CCC--CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CCcCCC-CCC--cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 777765 444 23356777777777765 333 34566666666666663 444 44 56666666666666 344
Q ss_pred ccccCCCCC-------CEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhccc
Q 002155 203 KEIGNLSAL-------SVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLA 257 (959)
Q Consensus 203 ~~~~~l~~L-------~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 257 (959)
. |.. +| +.|+|++|.|+ .+|..+..+++|++|+|++|++++.+|..|..++
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp C-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred h-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 4 433 44 55666666665 3444455555666666666665555555555443
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.6e-20 Score=186.33 Aligned_cols=132 Identities=27% Similarity=0.275 Sum_probs=66.2
Q ss_pred cccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEcc
Q 002155 318 VVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLT 397 (959)
Q Consensus 318 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 397 (959)
+++.|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 45555555555554444445555555555555555554444444555555555555555554444444455555555555
Q ss_pred CCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccc
Q 002155 398 GNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKL 449 (959)
Q Consensus 398 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 449 (959)
+|++++..+..|..+++|++|++++|++++..+..+..+++|+.|++++|++
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 160 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 160 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCe
Confidence 5555544444444455555555555555443333344444444444444443
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-19 Score=185.09 Aligned_cols=181 Identities=22% Similarity=0.205 Sum_probs=111.7
Q ss_pred cEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeeccc
Q 002155 45 ESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRN 124 (959)
Q Consensus 45 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 124 (959)
+.++.+++.+. .+|..+ .++|++|+|++|++++..+..|..+++|++|++++|+++++++..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 34566666655 455433 346666666666666555555666666666666666666655555666666666665555
Q ss_pred ccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCcc
Q 002155 125 HIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKE 204 (959)
Q Consensus 125 ~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 204 (959)
.+.+.. +..+..+++|++|++++|++++..+..|..+++|++|+|++|.+++..+..
T Consensus 87 ~l~~~~-----------------------~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 143 (208)
T 2o6s_A 87 QLQSLP-----------------------NGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGV 143 (208)
T ss_dssp CCCCCC-----------------------TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred cCCccC-----------------------HhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHH
Confidence 554333 333444455555555555555444445666777777777777777655556
Q ss_pred ccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccC
Q 002155 205 IGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQ 258 (959)
Q Consensus 205 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 258 (959)
|..+++|++|++++|.+.+ .+++|++|+++.|++++.+|..++.++.
T Consensus 144 ~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 144 FDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred hccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 7777777777777776553 3456777777777777777777766654
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.79 E-value=9.4e-20 Score=195.72 Aligned_cols=171 Identities=20% Similarity=0.251 Sum_probs=72.1
Q ss_pred cCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEE
Q 002155 63 GNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVL 142 (959)
Q Consensus 63 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L 142 (959)
..+++|++|++++|.++ .++ .+..+++|++|++++|++++..+ +.++++|++|++++|.+.+ +|......+|++|
T Consensus 43 ~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L 117 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSSLKDLKKLKSL 117 (291)
T ss_dssp HHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGGGTTCTTCCEE
T ss_pred hhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-ChhhccCCCCCEE
Confidence 34455555555555554 222 24445555555555555554333 4455555555555444432 1111111123344
Q ss_pred eccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCC
Q 002155 143 DLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFD 222 (959)
Q Consensus 143 ~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~ 222 (959)
++++|++++. ..+..+++|++|++++|++++. ..+..+++|++|+|++|.|++..+ +..+++|+.|+|++|.|+
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 4444444321 1233334444444444444322 234444444444444444443222 444444444444444444
Q ss_pred ccCCccccCCCCCCEEEcccccCC
Q 002155 223 GIIPYELGDCISLTTLDLGNNNLS 246 (959)
Q Consensus 223 ~~~~~~~~~l~~L~~L~L~~N~l~ 246 (959)
.. + .+..+++|+.|++++|+++
T Consensus 192 ~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 192 DL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp BC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred CC-h-hhccCCCCCEEECcCCccc
Confidence 22 1 2444444444444444443
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.4e-19 Score=206.12 Aligned_cols=180 Identities=29% Similarity=0.398 Sum_probs=149.3
Q ss_pred CCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEeccC
Q 002155 67 MLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDS 146 (959)
Q Consensus 67 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~ 146 (959)
+|+.|+|++|++++ +|..+ .++|++|+|++|+|+.+ | ..+++|++|+|++|.+.+ +|. +.. +|++|++++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~~i-p---~~l~~L~~L~Ls~N~l~~-ip~-l~~-~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALISL-P---ELPASLEYLDACDNRLST-LPE-LPA-SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSC-CCC-CCT-TCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCccc-c---cccCCCCEEEccCCCCCC-cch-hhc-CCCEEECCC
Confidence 89999999999995 77766 48999999999999954 4 457999999999999997 666 555 899999999
Q ss_pred CccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCC
Q 002155 147 NNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIP 226 (959)
Q Consensus 147 n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 226 (959)
|++++ +|. .+++|+.|++++|.|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|.|+ .+|
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 99997 454 68899999999999985 665 67899999999999996 666 66 89999999999999 555
Q ss_pred ccccCCCCC-------CEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCC
Q 002155 227 YELGDCISL-------TTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPI 273 (959)
Q Consensus 227 ~~~~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 273 (959)
. +.. +| ++|+|++|+|+. +|..+..+++|+.|+|++|.+++.+
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~ 246 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRI 246 (571)
T ss_dssp C-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHH
T ss_pred h-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcC
Confidence 5 554 67 999999999985 4777777999999999999887533
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-19 Score=211.96 Aligned_cols=188 Identities=23% Similarity=0.284 Sum_probs=90.2
Q ss_pred ccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecc
Q 002155 44 MESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFR 123 (959)
Q Consensus 44 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 123 (959)
+..++|+.+.+...++ +..|++|+.|+|++|.+. .+| .+..+++|+.|+|++|++++..+ |..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 3444445444442222 445555566666666555 333 35555566666666665554443 55555555555555
Q ss_pred cccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCc
Q 002155 124 NHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPK 203 (959)
Q Consensus 124 n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~ 203 (959)
|.+.+ +|......+|++|+|++|++.+. ..+..+++|+.|+|++|.|++. .
T Consensus 97 N~l~~-l~~l~~l~~L~~L~Ls~N~l~~l--------------------------~~l~~l~~L~~L~Ls~N~l~~l--~ 147 (605)
T 1m9s_A 97 NKIKD-LSSLKDLKKLKSLSLEHNGISDI--------------------------NGLVHLPQLESLYLGNNKITDI--T 147 (605)
T ss_dssp SCCCC-CTTSTTCTTCCEEECTTSCCCCC--------------------------GGGGGCTTCSEEECCSSCCCCC--G
T ss_pred CCCCC-ChhhccCCCCCEEEecCCCCCCC--------------------------ccccCCCccCEEECCCCccCCc--h
Confidence 55442 11111111233444444443321 1244444555555555555432 3
Q ss_pred cccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCC
Q 002155 204 EIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 204 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
.+..+++|+.|+|++|.|.+..| +..+++|+.|+|++|+|+++ ..|..+++|+.|+|++|.+.
T Consensus 148 ~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 148 VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp GGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEE
T ss_pred hhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCc
Confidence 45555555555555555554333 45555555555555555543 23555555555555555554
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.77 E-value=4.4e-19 Score=208.71 Aligned_cols=100 Identities=23% Similarity=0.356 Sum_probs=45.6
Q ss_pred ceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcc
Q 002155 162 TLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLG 241 (959)
Q Consensus 162 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 241 (959)
.+..+.+.++.+....+ +..+++|+.|++++|.|.. ++ .|..+++|+.|+|++|.|++..| +..+++|+.|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 34444444444443222 3445555555555555542 22 34455555555555555543332 4444555555555
Q ss_pred cccCCCCCchhhhcccCCCeeEcccccC
Q 002155 242 NNNLSGLIPEKIADLAQLQCLVLSHNNL 269 (959)
Q Consensus 242 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 269 (959)
+|+++++ ..+..+++|+.|+|++|.+
T Consensus 96 ~N~l~~l--~~l~~l~~L~~L~Ls~N~l 121 (605)
T 1m9s_A 96 ENKIKDL--SSLKDLKKLKSLSLEHNGI 121 (605)
T ss_dssp SSCCCCC--TTSTTCTTCCEEECTTSCC
T ss_pred CCCCCCC--hhhccCCCCCEEEecCCCC
Confidence 5544432 1344444444444444443
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.77 E-value=4.1e-19 Score=182.20 Aligned_cols=135 Identities=24% Similarity=0.275 Sum_probs=76.8
Q ss_pred CCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceec
Q 002155 390 GLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMN 469 (959)
Q Consensus 390 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ 469 (959)
+|+.|++++|+|+++.+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|+.+++.
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~-------------- 98 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKS-------------- 98 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTT--------------
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHh--------------
Confidence 445555555555544444555555555555555555544455555555555555555555543332
Q ss_pred cCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcc
Q 002155 470 MSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEG 549 (959)
Q Consensus 470 ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 549 (959)
.|.++++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++.+
T Consensus 99 ------------~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 99 ------------LFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp ------------TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ------------HccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 23345566666666666665556666666666666666666666555566666666666666666654
Q ss_pred c
Q 002155 550 M 550 (959)
Q Consensus 550 ~ 550 (959)
.
T Consensus 167 ~ 167 (220)
T 2v9t_B 167 D 167 (220)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2e-21 Score=227.42 Aligned_cols=200 Identities=19% Similarity=0.143 Sum_probs=92.0
Q ss_pred CCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCce
Q 002155 39 GNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQ 118 (959)
Q Consensus 39 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 118 (959)
+..++|+.|+|++|++. .+|++++.+++|++|++++|.....+|.. +..+.+.+.+|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~l-----------l~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILL-----------MRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHH-----------HHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHH-----------HHhcccccCCHHHHHHHHhccc
Confidence 34445555555555554 45555555555555555444310000000 0001134455566666666666
Q ss_pred ee-ecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcc
Q 002155 119 LV-IFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNML 197 (959)
Q Consensus 119 L~-L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i 197 (959)
|+ ++.|.+. .|..+.+++|.++...+. .|+.|++++|.|++ +|. |+.+++|+.|+|++|.|
T Consensus 414 L~~l~~n~~~----------~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l 475 (567)
T 1dce_A 414 VDPMRAAYLD----------DLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRL 475 (567)
T ss_dssp HCGGGHHHHH----------HHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCC
T ss_pred Ccchhhcccc----------hhhhhhhhcccccccCcc------CceEEEecCCCCCC-CcC-ccccccCcEeecCcccc
Confidence 66 4554432 123333334443322111 24444444444442 333 44555555555555555
Q ss_pred cccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCC-chhhhcccCCCeeEcccccCCC
Q 002155 198 KGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLI-PEKIADLAQLQCLVLSHNNLSG 271 (959)
Q Consensus 198 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~ 271 (959)
+ .+|..|+++++|++|+|++|.|++ +| .++.+++|++|+|++|+|++.. |..|+.+++|+.|+|++|.+++
T Consensus 476 ~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~ 547 (567)
T 1dce_A 476 R-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547 (567)
T ss_dssp C-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred c-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCC
Confidence 5 444455555555555555555543 33 4455555555555555555443 4455555555555555555543
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.7e-19 Score=182.48 Aligned_cols=157 Identities=19% Similarity=0.215 Sum_probs=116.3
Q ss_pred eEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCC-CccCCcccccccccCCccccCCCchhhhcccccceEeecc
Q 002155 368 QGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVP-TSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQH 446 (959)
Q Consensus 368 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 446 (959)
+.+++++|.++ .+|..+. ..+++|+|++|+|++..+ ..|.++++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 46777777777 3454443 345677777777775533 3466777777777777777766666677777777777776
Q ss_pred ccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCC
Q 002155 447 NKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQ 526 (959)
Q Consensus 447 N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 526 (959)
|+|++++ +..|.++++|++|+|++|++++..|..|..+++|++|+|++|+|++.
T Consensus 91 N~l~~~~--------------------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 144 (220)
T 2v70_A 91 NRLENVQ--------------------------HKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTV 144 (220)
T ss_dssp SCCCCCC--------------------------GGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCB
T ss_pred CccCccC--------------------------HhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEE
Confidence 6666543 44566678889999999999887788888899999999999999888
Q ss_pred CCccccCCCCccEEecccCcCcccCCC
Q 002155 527 IPETMCSLSNLLYLSLAENRLEGMVPR 553 (959)
Q Consensus 527 ~p~~~~~l~~L~~L~l~~N~l~~~~~~ 553 (959)
.|..|..+++|+.|++++|++.+..+.
T Consensus 145 ~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 145 APGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred CHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 888888899999999988888876553
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-18 Score=193.54 Aligned_cols=177 Identities=23% Similarity=0.207 Sum_probs=109.6
Q ss_pred cEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccc-cCCCCceeeecccccccccCcccCCCcccEEeccCC
Q 002155 69 KSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFE-KCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSN 147 (959)
Q Consensus 69 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n 147 (959)
+.+++++|+++ .+|..+ .+.++.|+|++|+|+++.+..|. ++++|++|+|++|.|.+.
T Consensus 21 ~~l~c~~~~l~-~iP~~~--~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i------------------ 79 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSL--PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFI------------------ 79 (361)
T ss_dssp TEEECCSSCCS-SCCSSC--CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEE------------------
T ss_pred CEEEeCCCCcC-ccCccC--CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCcc------------------
Confidence 45555555555 344443 23455555555555555555444 455554444444444332
Q ss_pred ccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCc
Q 002155 148 NFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPY 227 (959)
Q Consensus 148 ~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 227 (959)
.+..|..+++|++|++++|+|+...+..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|.|+.+.+.
T Consensus 80 -----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~ 154 (361)
T 2xot_A 80 -----SSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVE 154 (361)
T ss_dssp -----CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGG
T ss_pred -----ChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHH
Confidence 233333344444444444444434445566777777777777777766677788888888888888888765555
Q ss_pred cc---cCCCCCCEEEcccccCCCCCchhhhcccC--CCeeEcccccCCC
Q 002155 228 EL---GDCISLTTLDLGNNNLSGLIPEKIADLAQ--LQCLVLSHNNLSG 271 (959)
Q Consensus 228 ~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~Ls~N~l~~ 271 (959)
.| ..+++|++|+|++|+|+.+.+..|..++. |+.|+|++|.+..
T Consensus 155 ~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 155 LIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp GTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred HhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 55 56788888888888888777778888877 4888888888763
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.76 E-value=8.6e-19 Score=188.19 Aligned_cols=175 Identities=20% Similarity=0.231 Sum_probs=152.0
Q ss_pred cCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCc
Q 002155 38 LGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLS 117 (959)
Q Consensus 38 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 117 (959)
+..+++|+.|++++|++. .++ .+..+++|++|+|++|++++. +. +..+++|++|++++|++++. ..+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLFLDENKVKDL--SSLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCG--GGGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCC-cc-cccCCCCCEEECCCCcCCCC--hhhccCCCCC
Confidence 457889999999999998 555 499999999999999999954 44 99999999999999999974 3499999999
Q ss_pred eeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcc
Q 002155 118 QLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNML 197 (959)
Q Consensus 118 ~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i 197 (959)
+|++++|.+.+. +......+|++|++++|++++. ..+..+++|++|++++|.+++..+ +..+++|++|+|++|.|
T Consensus 116 ~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 116 SLSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 999999999864 4433444699999999999976 678999999999999999996554 99999999999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcCCccC
Q 002155 198 KGHLPKEIGNLSALSVLDLNSNLFDGII 225 (959)
Q Consensus 198 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 225 (959)
++ ++ .+..+++|+.|++++|.++...
T Consensus 191 ~~-l~-~l~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 191 SD-LR-ALAGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp CB-CG-GGTTCTTCSEEEEEEEEEECCC
T ss_pred CC-Ch-hhccCCCCCEEECcCCcccCCc
Confidence 95 44 5999999999999999998533
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5.5e-21 Score=223.64 Aligned_cols=203 Identities=24% Similarity=0.225 Sum_probs=145.9
Q ss_pred CCCCCCcEEEccCccccccCCcccccCCCCceeeecccc-------------cccccCcccCCC-cccEEe-ccCCcccc
Q 002155 87 CTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNH-------------IYGSIPEYLSKL-PLMVLD-LDSNNFTG 151 (959)
Q Consensus 87 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-------------~~~~~p~~~~~~-~L~~L~-ls~n~l~~ 151 (959)
...++|+.|+|++|+++ .+|..+++|++|+.|++++|. +.+.+|..++.+ +|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 45667777777777776 456667777777777775554 223334444333 244444 3433322
Q ss_pred ccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccC
Q 002155 152 IIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGD 231 (959)
Q Consensus 152 ~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 231 (959)
.|..+.+.+|.++...+ ..|+.|+|++|.|++ +|. |+.+++|+.|+|++|.|+ .+|..++.
T Consensus 424 ----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 23444455555553221 259999999999996 666 999999999999999999 78899999
Q ss_pred CCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCC-C
Q 002155 232 CISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPI-P 310 (959)
Q Consensus 232 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~-p 310 (959)
+++|++|+|++|+|+++ | .|+.+++|+.|+|++|+|++ .. |
T Consensus 485 l~~L~~L~Ls~N~l~~l-p-~l~~l~~L~~L~Ls~N~l~~------------------------------------~~~p 526 (567)
T 1dce_A 485 LRCLEVLQASDNALENV-D-GVANLPRLQELLLCNNRLQQ------------------------------------SAAI 526 (567)
T ss_dssp CTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSSCCCS------------------------------------SSTT
T ss_pred CCCCCEEECCCCCCCCC-c-ccCCCCCCcEEECCCCCCCC------------------------------------CCCc
Confidence 99999999999999974 6 89999999999999998863 22 5
Q ss_pred cccCCcccccEEEccCCcCcccCCc---cccCCCCCCEEEc
Q 002155 311 EELGSCVVVVDLLLNNNMLSGKIPG---SLSRLTNLTTLDL 348 (959)
Q Consensus 311 ~~~~~~~~L~~L~L~~n~i~~~~~~---~~~~l~~L~~L~L 348 (959)
..++.+++|+.|+|++|++++.+|. .+..+++|+.|++
T Consensus 527 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 527 QPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp GGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred HHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 6677777888888888888766553 2445788888864
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.4e-19 Score=187.33 Aligned_cols=169 Identities=20% Similarity=0.178 Sum_probs=110.3
Q ss_pred CCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCcee
Q 002155 40 NWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQL 119 (959)
Q Consensus 40 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 119 (959)
++..++.+++++|.+. .++ .+..+++|++|++++|+++ .+| .+..+++|++|+|++|++++..+ |.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4667777888888877 444 5788888888888888887 555 67888888888888888887655 7888888888
Q ss_pred eecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccc
Q 002155 120 VIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKG 199 (959)
Q Consensus 120 ~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~ 199 (959)
+|++|.+.+.. .... .+|++|++++|++++. ..+..+++|++|++++|++++. + .+..+++|++|+|++|+|++
T Consensus 91 ~L~~N~l~~l~-~~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 91 SVNRNRLKNLN-GIPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp ECCSSCCSCCT-TCCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred ECCCCccCCcC-cccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 88888877533 2222 5577777777777653 2355555555555555555532 2 34555555555555555553
Q ss_pred cCCccccCCCCCCEEEccCCcCC
Q 002155 200 HLPKEIGNLSALSVLDLNSNLFD 222 (959)
Q Consensus 200 ~~~~~~~~l~~L~~L~L~~N~i~ 222 (959)
. ..+..+++|+.|++++|.+.
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEE
T ss_pred h--HHhccCCCCCEEeCCCCccc
Confidence 3 44555555555555555554
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.9e-18 Score=174.12 Aligned_cols=134 Identities=22% Similarity=0.202 Sum_probs=110.7
Q ss_pred ccEEeccCCccccccC-cccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEcc
Q 002155 139 LMVLDLDSNNFTGIIP-VSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLN 217 (959)
Q Consensus 139 L~~L~ls~n~l~~~~p-~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 217 (959)
+++|++++|++++..| ..|..+++|++|++++|+|++..+..|.++++|++|+|++|.|++..+..|.++++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 4567777777776644 346778888888888888887777788888888888888888887777788888899999999
Q ss_pred CCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCC
Q 002155 218 SNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGP 272 (959)
Q Consensus 218 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 272 (959)
+|.|+++.|..|..+++|++|+|++|++++..|..|..+++|+.|+|++|.+.+.
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 9998888888888888899999999998888888888889999999999888753
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.7e-18 Score=188.72 Aligned_cols=157 Identities=25% Similarity=0.172 Sum_probs=135.0
Q ss_pred ccEEeccCCccccccCcccc-cccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEcc
Q 002155 139 LMVLDLDSNNFTGIIPVSIW-NSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLN 217 (959)
Q Consensus 139 L~~L~ls~n~l~~~~p~~~~-~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 217 (959)
+++|+|++|++++..+..+. ++++|+.|++++|+|++..+..|.++++|++|+|++|+|+...+..|.++++|++|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 67788888888888888887 89999999999999998888899999999999999999998888899999999999999
Q ss_pred CCcCCccCCccccCCCCCCEEEcccccCCCCCchhh---hcccCCCeeEcccccCCCCCCCCCcchhhccCCCCcccccc
Q 002155 218 SNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKI---ADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQH 294 (959)
Q Consensus 218 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~ 294 (959)
+|.|+.+.|..|.++++|++|+|++|+|+.+.+..| ..+++|+.|+|++|+|++..+ . .+..+..
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~----~--------~~~~l~~ 188 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPL----T--------DLQKLPA 188 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCH----H--------HHHHSCH
T ss_pred CCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCH----H--------HhhhccH
Confidence 999999889999999999999999999998766666 679999999999999974221 1 1223333
Q ss_pred --ccceecCCCcCCC
Q 002155 295 --HGVFDLSYNRLSG 307 (959)
Q Consensus 295 --L~~l~L~~n~l~~ 307 (959)
++.|++++|.+..
T Consensus 189 ~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 189 WVKNGLYLHNNPLEC 203 (361)
T ss_dssp HHHTTEECCSSCEEC
T ss_pred hhcceEEecCCCccC
Confidence 4679999999974
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.75 E-value=5.6e-18 Score=173.67 Aligned_cols=153 Identities=25% Similarity=0.304 Sum_probs=129.6
Q ss_pred cceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCc
Q 002155 296 GVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNN 375 (959)
Q Consensus 296 ~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 375 (959)
..++++++.++ .+|..+. +.++.|++++|+|+++.+..|..+++|++|+|++|++++..|..|.++++|+.|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45677777776 4555544 57888999999998888888899999999999999998888888999999999999999
Q ss_pred ccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccC
Q 002155 376 QLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSG 451 (959)
Q Consensus 376 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 451 (959)
+|+...+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|++++|++..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 9987666778889999999999999998888889999999999999999987777788889999999999998864
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.2e-18 Score=174.60 Aligned_cols=152 Identities=24% Similarity=0.233 Sum_probs=69.7
Q ss_pred ceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeecc
Q 002155 367 LQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQH 446 (959)
Q Consensus 367 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 446 (959)
-+.++.+++.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 344555555554 3333222 4445555555555444444444444444444444444433333344444444444444
Q ss_pred ccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCC
Q 002155 447 NKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQ 526 (959)
Q Consensus 447 N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 526 (959)
|+|++++ +..|..+++|+.|+|++|+++ .+|..+..+++|++|+|++|+|++.
T Consensus 98 N~l~~l~--------------------------~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~ 150 (229)
T 3e6j_A 98 NQLTVLP--------------------------SAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSI 150 (229)
T ss_dssp SCCCCCC--------------------------TTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCC
T ss_pred CcCCccC--------------------------hhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCcc
Confidence 4443222 222334445555555555555 4455555555555555555555544
Q ss_pred CCccccCCCCccEEecccCcCc
Q 002155 527 IPETMCSLSNLLYLSLAENRLE 548 (959)
Q Consensus 527 ~p~~~~~l~~L~~L~l~~N~l~ 548 (959)
.+..|..+++|+.|++++|++.
T Consensus 151 ~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 151 PHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp CTTTTTTCTTCCEEECTTSCBC
T ss_pred CHHHHhCCCCCCEEEeeCCCcc
Confidence 4444444444444444444333
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.73 E-value=3e-18 Score=180.93 Aligned_cols=169 Identities=21% Similarity=0.225 Sum_probs=93.1
Q ss_pred CCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCee
Q 002155 183 NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCL 262 (959)
Q Consensus 183 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 262 (959)
++.++..+++++|.+++.. .+..+++|++|++++|.|+. ++ .+..+++|++|+|++|++++..+ +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4555666666666666332 46666677777777776663 33 56666777777777777765533 6677777777
Q ss_pred EcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCC
Q 002155 263 VLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTN 342 (959)
Q Consensus 263 ~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~ 342 (959)
+|++|++++. | .+.. .+|+.|++++|++++. +.+..+++|+.|++++|++++. + .+..+++
T Consensus 91 ~L~~N~l~~l-~-------------~~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~ 151 (263)
T 1xeu_A 91 SVNRNRLKNL-N-------------GIPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSK 151 (263)
T ss_dssp ECCSSCCSCC-T-------------TCCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTT
T ss_pred ECCCCccCCc-C-------------cccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCC
Confidence 7777766521 1 1111 3344444444444421 2344555555555555555543 1 4555555
Q ss_pred CCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccC
Q 002155 343 LTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLT 378 (959)
Q Consensus 343 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 378 (959)
|++|++++|++++. ..+..+++|+.|++++|.++
T Consensus 152 L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 152 LEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp CCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEE
T ss_pred CCEEECCCCcCcch--HHhccCCCCCEEeCCCCccc
Confidence 55555555555543 34445555555555555554
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.6e-17 Score=169.94 Aligned_cols=154 Identities=29% Similarity=0.347 Sum_probs=103.6
Q ss_pred CEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCc
Q 002155 344 TTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN 423 (959)
Q Consensus 344 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 423 (959)
+.++.+++.++. +|..+. ++|+.|+|++|.+++..|..|..+++|++|+|++|+|+.+.+..|.++++|++|+|++|
T Consensus 22 ~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 445555555553 333222 55666666666666665666666667777777777776555566677777777777777
Q ss_pred cccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccC
Q 002155 424 ELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEI 503 (959)
Q Consensus 424 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 503 (959)
+|++..+..|..+++|+.|+|++|+|+. +|..+..+++|+.|+|++|++++..
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~~---------------------------lp~~~~~l~~L~~L~L~~N~l~~~~ 151 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLTE---------------------------LPRGIERLTHLTHLALDQNQLKSIP 151 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCS---------------------------CCTTGGGCTTCSEEECCSSCCCCCC
T ss_pred cCCccChhHhCcchhhCeEeccCCcccc---------------------------cCcccccCCCCCEEECCCCcCCccC
Confidence 7776555666777777777777777663 3344556777888888888888665
Q ss_pred CcCCcCCCCCcEEeCCCCcCCCCC
Q 002155 504 PPDLGNLMQLEYLDVSRNRLCGQI 527 (959)
Q Consensus 504 p~~~~~l~~L~~L~Ls~N~l~~~~ 527 (959)
+..+..+++|++|+|++|++.+..
T Consensus 152 ~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 152 HGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TTTTTTCTTCCEEECTTSCBCTTB
T ss_pred HHHHhCCCCCCEEEeeCCCccCCc
Confidence 667888888888888888887543
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=7e-18 Score=177.54 Aligned_cols=139 Identities=20% Similarity=0.196 Sum_probs=106.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEc-CCCCE--EEEEEccccchh------------------------hHHHHHHHHHHHhc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAAL-PDGKT--VAVKKLSQAKTQ------------------------GHREFTAEMETLGK 731 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~e~~~l~~ 731 (959)
.-|++.+.||+|+||.||+|.+ .+|+. ||||+++..... ....+.+|+..++.
T Consensus 47 ~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 126 (258)
T 1zth_A 47 YITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER 126 (258)
T ss_dssp SEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred CchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence 3466788999999999999998 67888 999986532111 11357889999999
Q ss_pred CCCCce--eccccceecCCceEEEEEeccC-C----CHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 002155 732 VKHQNL--VPLLGYCSFDEEKLLVYEYMVN-G----SLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHII 804 (959)
Q Consensus 732 l~h~ni--v~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv 804 (959)
++|+++ ..++++ +..++||||+.+ | +|.++... .++..+..++.|++.|+.|||. +.||+
T Consensus 127 l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~--~~giv 193 (258)
T 1zth_A 127 AKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQ--EAELV 193 (258)
T ss_dssp HHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHH--TSCEE
T ss_pred HHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHH--HCCEE
Confidence 988864 233321 467899999953 4 66665432 1234567899999999999994 46999
Q ss_pred eCCCCCCCEEECCCCcEEEccccccccc
Q 002155 805 HRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 805 H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||||+|||++. .++|+|||+|...
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999998 9999999999754
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.1e-18 Score=187.77 Aligned_cols=221 Identities=14% Similarity=0.122 Sum_probs=119.6
Q ss_pred CcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEccccc----CCCCCchhhhcccCC
Q 002155 184 AAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNN----LSGLIPEKIADLAQL 259 (959)
Q Consensus 184 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~----l~~~~~~~~~~l~~L 259 (959)
+++|+.|+|.+ .++.+.+.+|.++++|+.|++++|.+..+.+.+|.++.++..+.+..+. ...+....|.++.+|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 66666666666 5655555666666666666666666666666666666666655554421 122222334444444
Q ss_pred C-eeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccc-
Q 002155 260 Q-CLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSL- 337 (959)
Q Consensus 260 ~-~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~- 337 (959)
+ .+.+....- .+...+. .-....++..+.+.++-.. .....+
T Consensus 179 ~~~i~~~~~~~------l~~~~~~-----------------------------~~~~~~~~~~l~~~~~l~~-~~~~~l~ 222 (329)
T 3sb4_A 179 ETTIQVGAMGK------LEDEIMK-----------------------------AGLQPRDINFLTIEGKLDN-ADFKLIR 222 (329)
T ss_dssp EEEEEECTTCC------HHHHHHH-----------------------------TTCCGGGCSEEEEEECCCH-HHHHHHH
T ss_pred ceeEEecCCCc------HHHHHhh-----------------------------cccCccccceEEEeeeecH-HHHHHHH
Confidence 4 222221100 0000000 0001122233333322111 111111
Q ss_pred cCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCc-EEEccCCcCCCCCCCccCCccccc
Q 002155 338 SRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLV-KLNLTGNKLSGKVPTSFGNLKELT 416 (959)
Q Consensus 338 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~-~L~L~~N~i~~~~~~~~~~l~~L~ 416 (959)
..+++|+.|+|++|+++.+.+.+|.++.+|+.|++.+| ++.+.+.+|.++++|+ .+++.+ .++.+.+.+|.++++|+
T Consensus 223 ~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~ 300 (329)
T 3sb4_A 223 DYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLR 300 (329)
T ss_dssp HHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEE
T ss_pred HhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCC
Confidence 22566777777776666666666777777777777666 5555566677777776 777766 55556666777777777
Q ss_pred ccccCCccccCCCchhhhcccccceEe
Q 002155 417 HLDLSFNELDGQLPSSLSNILNLVGLY 443 (959)
Q Consensus 417 ~L~L~~N~l~~~~~~~l~~l~~L~~L~ 443 (959)
.++++.|.++...+.+|.++++|+.++
T Consensus 301 ~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 301 YVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEEeCCCccCccchhhhcCCcchhhhc
Confidence 777777777666666777777777665
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.5e-17 Score=165.96 Aligned_cols=109 Identities=23% Similarity=0.196 Sum_probs=84.9
Q ss_pred ccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCC
Q 002155 156 SIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISL 235 (959)
Q Consensus 156 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 235 (959)
....+++|++|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|.+++..+..++.+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 3456677777777777777 555 67788888888888887662 3477888888888888888887677778888888
Q ss_pred CEEEcccccCCCCCchhhhcccCCCeeEccccc
Q 002155 236 TTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNN 268 (959)
Q Consensus 236 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 268 (959)
++|+|++|++++..+..|+.+++|++|++++|+
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 888888888887677788888888888888876
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-18 Score=189.09 Aligned_cols=218 Identities=12% Similarity=0.090 Sum_probs=132.2
Q ss_pred cccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcc----cCCccccccccCCCC
Q 002155 316 CVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQ----LTGSIPWSLGSLGGL 391 (959)
Q Consensus 316 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~----l~~~~~~~~~~l~~L 391 (959)
+++|+.+.+.+ .++.+.+.+|.++++|+.|++++|.+..+.+.+|.++.++..+.++.+. .......+|..+..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 66666677766 6666667777777777777777777776777777776666666655532 222334455566666
Q ss_pred c-EEEccCCcCCCCCCCc----cCCcccccccccCCccccCCCchhh-hcccccceEeeccccccCCccccccchhhhhh
Q 002155 392 V-KLNLTGNKLSGKVPTS----FGNLKELTHLDLSFNELDGQLPSSL-SNILNLVGLYLQHNKLSGPVDELFSNSAAWKI 465 (959)
Q Consensus 392 ~-~L~L~~N~i~~~~~~~----~~~l~~L~~L~L~~N~l~~~~~~~l-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l 465 (959)
+ .+.+.... .++.. -....++..+.+.++-.. .....+ ..+++|+.|+|++|+++.+++.+|.... +|
T Consensus 179 ~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~--~L 252 (329)
T 3sb4_A 179 ETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKK--YL 252 (329)
T ss_dssp EEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCT--TC
T ss_pred ceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCC--CC
Confidence 5 44443221 11110 012334444544443221 111112 2367777777777777777776666554 56
Q ss_pred ceeccCCcccCCCCCccccCccccc-eeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEec
Q 002155 466 ATMNMSNNLFDGGLPRSLGNLSYLT-NLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSL 542 (959)
Q Consensus 466 ~~L~ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 542 (959)
+.+++++| ++.+.+.+|.++++|+ .|++.+ +++...+.+|.++++|+.|++++|+++.+.+..|.++++|+.++.
T Consensus 253 ~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 253 LKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred CEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 66666665 5555666777777777 777777 666556677777777777777777777666677777777777653
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.4e-17 Score=163.44 Aligned_cols=154 Identities=16% Similarity=0.210 Sum_probs=81.1
Q ss_pred ccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccE
Q 002155 62 IGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMV 141 (959)
Q Consensus 62 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~ 141 (959)
...+++|++|++++|.++ .+| .+..+++|++|++++|.++.. ..+..+++|++|++++|.+.
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~l~~n~l~-------------- 101 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIMGKDVT-------------- 101 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCC--GGGTTCTTCCEEEEECTTCB--------------
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcc--hhhhcCCCCCEEEeECCccC--------------
Confidence 356667777777777776 455 466677777777777755422 24444555555444444433
Q ss_pred EeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCc-
Q 002155 142 LDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNL- 220 (959)
Q Consensus 142 L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~- 220 (959)
+..+..|+.+++|++|+|++|.+++..+..+..+++|++|++++|.
T Consensus 102 ---------------------------------~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~ 148 (197)
T 4ezg_A 102 ---------------------------------SDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGA 148 (197)
T ss_dssp ---------------------------------GGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTB
T ss_pred ---------------------------------cccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCC
Confidence 2233334444455555555555554444555555555555555554
Q ss_pred CCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCC
Q 002155 221 FDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 221 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
++ .+| .+..+++|++|++++|++++. + .+..+++|+.|++++|++.
T Consensus 149 i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 149 IT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC---
T ss_pred cc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcccC
Confidence 43 222 355555555555555555543 2 4555555555555555543
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.69 E-value=8.7e-18 Score=202.96 Aligned_cols=191 Identities=21% Similarity=0.226 Sum_probs=104.0
Q ss_pred cCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCC
Q 002155 332 KIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGN 411 (959)
Q Consensus 332 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 411 (959)
..+..|..+++|+.|+|++|.+. .+|..+..+++|+.|+|++|.|+ .+|..|..+++|++|+|++|+|+ .+|..|++
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGG
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcC
Confidence 45666777777888888888877 45555557778888888888887 67777888888888888888888 56888888
Q ss_pred cccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccce
Q 002155 412 LKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTN 491 (959)
Q Consensus 412 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~ 491 (959)
+++|++|+|++|.|+ .+|..|..+++|+.|+|++|+|++.++..+..... ....+++++|.+++.+|.. |+.
T Consensus 292 l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~-~~~~l~l~~N~l~~~~p~~------l~~ 363 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSV-TGLIFYLRDNRPEIPLPHE------RRF 363 (727)
T ss_dssp GTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHH-HHHHHHHHHCCCCCCCCCC---------
T ss_pred CCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcch-hhhHHhhccCcccCcCccc------cce
Confidence 888888888888887 66777888888888888888888777766654321 1223455555555544432 333
Q ss_pred eeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcc
Q 002155 492 LDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEG 549 (959)
Q Consensus 492 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 549 (959)
|++++|... -..+ +.|.+..+..+..+..+....+++|-+..
T Consensus 364 l~l~~n~~~---~~~~-------------~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 364 IEINTDGEP---QREY-------------DSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp ------------------------------------------------------CCCG
T ss_pred eEeeccccc---cccc-------------CCccccccchhhcccccceeeeecccccc
Confidence 444444100 0111 13333344445556666677777776653
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.68 E-value=2.6e-17 Score=164.80 Aligned_cols=132 Identities=27% Similarity=0.308 Sum_probs=86.8
Q ss_pred cEEEccCCcCCCCCCCccCCcccccccccCCccccCCCch-hhhcccccceEeeccccccCCccccccchhhhhhceecc
Q 002155 392 VKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPS-SLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNM 470 (959)
Q Consensus 392 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~l 470 (959)
+++++++|.++ .+|..+.. +|++|++++|+|++..+. .|..+++|+.|+|++|+|+++.+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~---------------- 71 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEP---------------- 71 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCT----------------
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCH----------------
Confidence 67888888886 45554433 778888888888755553 47777777777777777776544
Q ss_pred CCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCccc
Q 002155 471 SNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGM 550 (959)
Q Consensus 471 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 550 (959)
..|.++++|++|+|++|++++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|++|++.+.
T Consensus 72 ----------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 72 ----------NAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp ----------TTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred ----------hHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 4455556666666666666655555566666666666666666666666666666666666666666655
Q ss_pred CC
Q 002155 551 VP 552 (959)
Q Consensus 551 ~~ 552 (959)
.+
T Consensus 142 c~ 143 (192)
T 1w8a_A 142 CH 143 (192)
T ss_dssp GG
T ss_pred Cc
Confidence 44
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.1e-17 Score=198.09 Aligned_cols=150 Identities=23% Similarity=0.292 Sum_probs=92.2
Q ss_pred cCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEcccccccccc
Q 002155 98 DGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSL 177 (959)
Q Consensus 98 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~ 177 (959)
+.|.+. .+++.|..+++|+.|+|++|.+.. +|..+..+++|++|+|++|.|+ .+
T Consensus 209 ~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~~------------------------l~~~~~~l~~L~~L~Ls~N~l~-~l 262 (727)
T 4b8c_D 209 IENRMV-MPKDSKYDDQLWHALDLSNLQIFN------------------------ISANIFKYDFLTRLYLNGNSLT-EL 262 (727)
T ss_dssp --------------CCCCCCEEECTTSCCSC------------------------CCGGGGGCCSCSCCBCTTSCCS-CC
T ss_pred ccccee-cChhhhccCCCCcEEECCCCCCCC------------------------CChhhcCCCCCCEEEeeCCcCc-cc
Confidence 344444 456666666666666666665542 2222223444444444444444 55
Q ss_pred CccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhccc
Q 002155 178 PYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLA 257 (959)
Q Consensus 178 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 257 (959)
|..|+++++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+ .+|..|+.+++|++|+|++|+|++.+|..+..+.
T Consensus 263 p~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~ 340 (727)
T 4b8c_D 263 PAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKS 340 (727)
T ss_dssp CGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHH
T ss_pred ChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcc
Confidence 666777777888888888887 66777888888888888888887 5666788888888888888888877777776543
Q ss_pred C-CCeeEcccccCCCCCCC
Q 002155 258 Q-LQCLVLSHNNLSGPIPS 275 (959)
Q Consensus 258 ~-L~~L~Ls~N~l~~~~~~ 275 (959)
. +..|+|++|.+++.+|.
T Consensus 341 ~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 341 VTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp HHHHHHHHHHCCCCCCCCC
T ss_pred hhhhHHhhccCcccCcCcc
Confidence 2 23467778877765553
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2.6e-15 Score=167.74 Aligned_cols=249 Identities=12% Similarity=0.144 Sum_probs=140.3
Q ss_pred CcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCC
Q 002155 131 PEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSA 210 (959)
Q Consensus 131 p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 210 (959)
...|...+|+.+.+..+ ++.+...+|.++ +|+.+.+.+ .++...+.+|.++++|+.++|++|+++.....+|. .++
T Consensus 129 ~~aF~~~~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~ 204 (401)
T 4fdw_A 129 KDAFRNSQIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAG 204 (401)
T ss_dssp TTTTTTCCCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCC
T ss_pred HhhcccCCccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecc
Confidence 33333334444444433 444444444442 355555543 33334445555555555555555555544444444 355
Q ss_pred CCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCcc
Q 002155 211 LSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLS 290 (959)
Q Consensus 211 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~ 290 (959)
|+.+.|..+ ++.+...+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+..+ ++
T Consensus 205 L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~~-i~-------------------- 260 (401)
T 4fdw_A 205 IEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPNG-VT-------------------- 260 (401)
T ss_dssp CSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEETT-CC--------------------
T ss_pred cCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCCC-cc--------------------
Confidence 555555533 44455555555555555555543 34444455555 45555555221 11
Q ss_pred ccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCc-----ccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCC
Q 002155 291 FIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLS-----GKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSI 365 (959)
Q Consensus 291 ~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~-----~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 365 (959)
.....+|.++++|+.+.+.+|.+. .+.+.+|.++++|+.+++. +.++.+...+|.++.
T Consensus 261 ----------------~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~ 323 (401)
T 4fdw_A 261 ----------------NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNR 323 (401)
T ss_dssp ----------------EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCC
T ss_pred ----------------EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCC
Confidence 012233444444444444444433 4566677777777777777 346666677777778
Q ss_pred cceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcc-cccccccCCcccc
Q 002155 366 KLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLK-ELTHLDLSFNELD 426 (959)
Q Consensus 366 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~-~L~~L~L~~N~l~ 426 (959)
+|+.+.+..| ++.+...+|.++ +|+.+++.+|.+....+..|.+++ +++.|.+..+.+.
T Consensus 324 ~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 324 KVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp SCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred CccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 8888888554 555666777777 888888888877766677777774 5777777766654
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.6e-16 Score=159.05 Aligned_cols=180 Identities=21% Similarity=0.255 Sum_probs=139.5
Q ss_pred eEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCC-ccCCcccccccccCCccccCCCchhhhcccccceEeecc
Q 002155 368 QGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPT-SFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQH 446 (959)
Q Consensus 368 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 446 (959)
+.+++++|.++ .+|..+.. +|++|++++|+|++..+. .|..+++|++|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 78999999997 66765543 899999999999977665 589999999999999999988899999999999999999
Q ss_pred ccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCC
Q 002155 447 NKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQ 526 (959)
Q Consensus 447 N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 526 (959)
|+|++++ |..|.++++|++|+|++|++++..|..+..+++|++|+|++|++++.
T Consensus 88 N~l~~~~--------------------------~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEIS--------------------------NKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEEC--------------------------SSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccC--------------------------HHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 9988644 34566788999999999999998899999999999999999999876
Q ss_pred CCc-cccCCCCccEEecccCcCcccCCCCcccCCCccccccCCCCCCCCCCCCCc
Q 002155 527 IPE-TMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNC 580 (959)
Q Consensus 527 ~p~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~~~~~~c 580 (959)
.+- .+. ..++...+.++...+..|. .+.+....++..+...|.......|
T Consensus 142 c~l~~~~--~~l~~~~~~~~~~~C~~P~--~l~~~~l~~l~~~~~~C~~~~~~~c 192 (192)
T 1w8a_A 142 CHLAWFA--EWLRKKSLNGGAARCGAPS--KVRDVQIKDLPHSEFKCSSENSEGC 192 (192)
T ss_dssp GGGHHHH--HHHHHHCCSGGGCBBCSST--TTTTSBGGGSCTTTCCCCCC---CC
T ss_pred CcchHHH--HHHHHcCCCCCCCCCCCCh--HHcCCChhhCcHhhcCcCCCCCCCC
Confidence 542 111 1123334455555554443 2455666677888888876554444
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=3.8e-16 Score=156.25 Aligned_cols=128 Identities=24% Similarity=0.268 Sum_probs=103.8
Q ss_pred eEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCC
Q 002155 441 GLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSR 520 (959)
Q Consensus 441 ~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 520 (959)
.+++++|.++.+|..++. .++.|++++|.++ .+|..|.++++|+.|+|++|++++..+..|.++++|++|+|++
T Consensus 14 ~l~~~~~~l~~ip~~~~~-----~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 14 VVRCSNKGLKVLPKGIPR-----DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp EEECTTSCCSSCCSCCCT-----TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EEEcCCCCCCcCCCCCCC-----CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 455555555555544332 4556666666665 5667888899999999999999987788899999999999999
Q ss_pred CcCCCCCCccccCCCCccEEecccCcCcccCCCC-cccCCCccccccCCCCCCCC
Q 002155 521 NRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS-GICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 521 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~~ 574 (959)
|+|++..|..|..+++|++|+|++|+|+++++.. ..+.+|+.+++.+|||.|+|
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 9999888889999999999999999999988764 45788999999999999964
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.65 E-value=2.3e-15 Score=168.31 Aligned_cols=255 Identities=11% Similarity=0.075 Sum_probs=163.7
Q ss_pred ccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCc
Q 002155 148 NFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPY 227 (959)
Q Consensus 148 ~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 227 (959)
.++.+...+|.+. +|+.+.+.++ ++.....+|.+. +|+.+.+.+ .++.+...+|.++++|+.+++++|.++.+...
T Consensus 123 ~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~ 198 (401)
T 4fdw_A 123 SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPAS 198 (401)
T ss_dssp TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTT
T ss_pred ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechh
Confidence 3444555555553 5666666555 444555566553 566666664 44445555666666666666666666655555
Q ss_pred cccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCC
Q 002155 228 ELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSG 307 (959)
Q Consensus 228 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~ 307 (959)
+|. +.+|+.+.|..+ ++.+...+|.++++|+.+++..| ++.
T Consensus 199 aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-------------------------------------l~~ 239 (401)
T 4fdw_A 199 TFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-------------------------------------VST 239 (401)
T ss_dssp TTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-------------------------------------CCE
T ss_pred hEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-------------------------------------ccC
Confidence 555 356666666533 55555566666666666665543 111
Q ss_pred CCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCC-----CCCCCCcCCCCcceEEEeeCcccCCccc
Q 002155 308 PIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLT-----GPIPSEFGDSIKLQGLYLGNNQLTGSIP 382 (959)
Q Consensus 308 ~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~-----~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 382 (959)
....+|.+ .+|+.+.+ .+.++.+...+|.++++|+.+++.+|.+. .+.+.+|.++.+|+.+.+.+ .++.+..
T Consensus 240 I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~ 316 (401)
T 4fdw_A 240 IGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQ 316 (401)
T ss_dssp ECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECT
T ss_pred cccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhh
Confidence 22334444 56777777 45566677788888888888888877665 35667778888888888874 4665666
Q ss_pred cccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhccc-ccceEeecccccc
Q 002155 383 WSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVGLYLQHNKLS 450 (959)
Q Consensus 383 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~ 450 (959)
.+|.++++|+.+.|..| ++.+...+|.++ +|+.+++++|.+....+..|.+++ +++.|++..+.+.
T Consensus 317 ~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 317 GLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred hhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 77777888888888554 555667778777 788888888777766666677764 6777777776654
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.62 E-value=1e-14 Score=163.86 Aligned_cols=156 Identities=13% Similarity=0.080 Sum_probs=88.2
Q ss_pred CCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCC
Q 002155 58 IPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL 137 (959)
Q Consensus 58 ~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~ 137 (959)
-..+|.++++|+.+.|..+ ++.+-..+|.++++|+.+++..+ ++.+...+|.++++|+.+.+..+ +.......|...
T Consensus 63 g~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~ 139 (394)
T 4fs7_A 63 GYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGC 139 (394)
T ss_dssp CTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTC
T ss_pred HHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecc
Confidence 3457888899999999754 66556678888899999999765 66677888999999888776544 333334444444
Q ss_pred cccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEcc
Q 002155 138 PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLN 217 (959)
Q Consensus 138 ~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 217 (959)
.+....+. +....+...+|.++++|+.+.+.++... .....|.++.+|+.+.+..| ++.....+|.+...|+.+.+.
T Consensus 140 ~~~~~~~~-~~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~ 216 (394)
T 4fs7_A 140 DFKEITIP-EGVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFP 216 (394)
T ss_dssp CCSEEECC-TTCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCC
T ss_pred cccccccC-ccccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecC
Confidence 43332222 1222233344555555555555443222 33444445555555554443 222333444444444444444
Q ss_pred CC
Q 002155 218 SN 219 (959)
Q Consensus 218 ~N 219 (959)
.+
T Consensus 217 ~~ 218 (394)
T 4fs7_A 217 NS 218 (394)
T ss_dssp TT
T ss_pred CC
Confidence 33
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.61 E-value=4.7e-16 Score=168.99 Aligned_cols=140 Identities=14% Similarity=0.094 Sum_probs=98.8
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccch--------------hhHHH--------HHHHHHHHhcCCCCc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKT--------------QGHRE--------FTAEMETLGKVKHQN 736 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~e~~~l~~l~h~n 736 (959)
.-|.+.+.||+|+||.||+|...+|+.||||+++.... ..... ..+|...+.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34888999999999999999999999999998653210 00111 123555555554333
Q ss_pred eeccccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC
Q 002155 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN 816 (959)
Q Consensus 737 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 816 (959)
+.-. ..+. ....++||||++|+++..+... .....++.|++.++.||| ..|||||||||.|||++
T Consensus 175 v~vp-~p~~-~~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~ 239 (397)
T 4gyi_A 175 FPVP-EPIA-QSRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIR 239 (397)
T ss_dssp CSCC-CEEE-EETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE
T ss_pred CCCC-eeee-ccCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEe
Confidence 2211 1111 1234799999999888654321 133568899999999999 78999999999999998
Q ss_pred CCC----------cEEEcccccccccc
Q 002155 817 EEF----------EAKVADFGLARLIS 833 (959)
Q Consensus 817 ~~~----------~~kl~Dfg~~~~~~ 833 (959)
+++ .+.|+||+-+....
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCCcccccccccceEEEEeCCcccCC
Confidence 776 48999999886543
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.60 E-value=2.3e-15 Score=147.24 Aligned_cols=131 Identities=24% Similarity=0.154 Sum_probs=107.8
Q ss_pred cccEEeccCCccc-cccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEc
Q 002155 138 PLMVLDLDSNNFT-GIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDL 216 (959)
Q Consensus 138 ~L~~L~ls~n~l~-~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 216 (959)
.+++|++++|+++ +.+|..+..+++|+.|++++|.+++. ..|..+++|++|+|++|.+++.+|..+.++++|++|+|
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 4777788888877 56677778888888888888888754 67888899999999999998767888888999999999
Q ss_pred cCCcCCccCC-ccccCCCCCCEEEcccccCCCCCc---hhhhcccCCCeeEcccccCC
Q 002155 217 NSNLFDGIIP-YELGDCISLTTLDLGNNNLSGLIP---EKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 217 ~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~ 270 (959)
++|.|++..+ ..+..+++|++|++++|++++..+ ..|..+++|++|++++|.+.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 9999986432 678889999999999999987755 58888999999999988875
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.60 E-value=2.2e-15 Score=147.44 Aligned_cols=136 Identities=29% Similarity=0.288 Sum_probs=111.4
Q ss_pred ccccEEEccCCcCc-ccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEE
Q 002155 317 VVVVDLLLNNNMLS-GKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLN 395 (959)
Q Consensus 317 ~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 395 (959)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|+.|++++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56778888888887 56677788888899999999988865 7788888999999999998876787777889999999
Q ss_pred ccCCcCCCCCC-CccCCcccccccccCCccccCCCc---hhhhcccccceEeeccccccCCcc
Q 002155 396 LTGNKLSGKVP-TSFGNLKELTHLDLSFNELDGQLP---SSLSNILNLVGLYLQHNKLSGPVD 454 (959)
Q Consensus 396 L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~---~~l~~l~~L~~L~L~~N~l~~~~~ 454 (959)
+++|++++... ..+..+++|++|++++|++++..+ ..+..+++|+.|++++|.+..++.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 164 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPD 164 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCCS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhccc
Confidence 99999886432 678888999999999999986555 478888999999999988876554
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.3e-14 Score=163.08 Aligned_cols=249 Identities=12% Similarity=0.041 Sum_probs=127.5
Q ss_pred ccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCc
Q 002155 148 NFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPY 227 (959)
Q Consensus 148 ~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 227 (959)
+++.+...+|.++.+|+++.+.++ ++.....+|.++++|+.++|.++ ++.....+|.++++|+.+.+..+ +..+...
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecce
Confidence 355566667777777777777644 55455667777777777777654 44455566777777776666544 3335555
Q ss_pred cccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCC
Q 002155 228 ELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSG 307 (959)
Q Consensus 228 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~ 307 (959)
+|.++..+....... +..+...+|.++++|+.+.+..+...
T Consensus 135 aF~~~~~~~~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~~~------------------------------------- 175 (394)
T 4fs7_A 135 AFKGCDFKEITIPEG--VTVIGDEAFATCESLEYVSLPDSMET------------------------------------- 175 (394)
T ss_dssp TTTTCCCSEEECCTT--CCEECTTTTTTCTTCCEEECCTTCCE-------------------------------------
T ss_pred eeecccccccccCcc--ccccchhhhcccCCCcEEecCCccce-------------------------------------
Confidence 666654333332222 22233456666666666666543211
Q ss_pred CCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCcccccccc
Q 002155 308 PIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGS 387 (959)
Q Consensus 308 ~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 387 (959)
.....|.++.+|+.+.+..+ ++.+...+|.+++.|+.+.+..+... +...+....+|+.+.+..+. +.+....|..
T Consensus 176 I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~ 251 (394)
T 4fs7_A 176 LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDSF-TELGKSVFYG 251 (394)
T ss_dssp ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTTC-CEECSSTTTT
T ss_pred eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCCc-eecccccccc
Confidence 12233444444444444433 33344445555555555555444322 11222233455555554332 2233444555
Q ss_pred CCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeecc
Q 002155 388 LGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQH 446 (959)
Q Consensus 388 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 446 (959)
+..|+.+.+..+... +....|.....++.+....+.+. ...|..+.+|+.+.+.+
T Consensus 252 ~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~ 306 (394)
T 4fs7_A 252 CTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLD 306 (394)
T ss_dssp CSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECT
T ss_pred cccceeEEcCCCcce-eeccccccccccceeccCceeec---ccccccccccccccccc
Confidence 555555555554433 44455555555555555444322 23455555555555543
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=4.3e-15 Score=148.54 Aligned_cols=128 Identities=24% Similarity=0.289 Sum_probs=106.1
Q ss_pred cEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCC
Q 002155 140 MVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSN 219 (959)
Q Consensus 140 ~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N 219 (959)
+++++++|+++. +|..+ .++|++|++++|.++ .+|..|.++++|++|+|++|.|++..+.+|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~~-ip~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSS-CCSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCc-CCCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 456777777763 44433 257888888888887 67788888999999999999999877788999999999999999
Q ss_pred cCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCC
Q 002155 220 LFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSG 271 (959)
Q Consensus 220 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 271 (959)
.|+++.|..|..+++|++|+|++|+|+.+.+..|..+++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9998888889999999999999999998877788899999999999998864
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.58 E-value=2.5e-15 Score=143.68 Aligned_cols=127 Identities=24% Similarity=0.171 Sum_probs=95.5
Q ss_pred cccEEeccCCccc-cccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEc
Q 002155 138 PLMVLDLDSNNFT-GIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDL 216 (959)
Q Consensus 138 ~L~~L~ls~n~l~-~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 216 (959)
++++|++++|+++ +.+|..+..+++|+.|++++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++|++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 3666777777776 56666667777777777777777744 66778888888888888888667777777888888888
Q ss_pred cCCcCCcc-CCccccCCCCCCEEEcccccCCCCCc---hhhhcccCCCeeEccc
Q 002155 217 NSNLFDGI-IPYELGDCISLTTLDLGNNNLSGLIP---EKIADLAQLQCLVLSH 266 (959)
Q Consensus 217 ~~N~i~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~ 266 (959)
++|.+++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|++++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 88888753 34677888888888888888887655 5788888888887763
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.57 E-value=7.5e-15 Score=144.92 Aligned_cols=129 Identities=20% Similarity=0.194 Sum_probs=94.0
Q ss_pred ceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCC
Q 002155 440 VGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVS 519 (959)
Q Consensus 440 ~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 519 (959)
+.+++++|+++.++...+. .++.|++++|.+++..+..|..+++|++|+|++|++++..+..+..+++|++|+++
T Consensus 10 ~~l~~~~~~l~~~p~~~~~-----~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTGIPS-----SATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp TEEECCSSCCSSCCTTCCT-----TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEEEecCCCCccCCCCCCC-----CCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 4455555555555443332 45556666666665555667778888888888888886666667888888888888
Q ss_pred CCcCCCCCCccccCCCCccEEecccCcCcccCCCC-cccCCCccccccCCCCCCC
Q 002155 520 RNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS-GICQNLSKISLTGNKDLCG 573 (959)
Q Consensus 520 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~ 573 (959)
+|+|++..+..+..+++|++|++++|+++++++.. ..+.+|+.+++.+|++.|+
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 88888777777888888888888888888877765 4577888888888888874
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.56 E-value=7.5e-15 Score=140.35 Aligned_cols=130 Identities=24% Similarity=0.201 Sum_probs=84.0
Q ss_pred CcCCceEeccCCccc-ccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCee
Q 002155 184 AAALERLVLTNNMLK-GHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCL 262 (959)
Q Consensus 184 l~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 262 (959)
.++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 356677777777776 55666667777777777777777654 566777777777777777776566666677777777
Q ss_pred EcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCC---ccccC
Q 002155 263 VLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIP---GSLSR 339 (959)
Q Consensus 263 ~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~---~~~~~ 339 (959)
++++|++++. ..+..+..+++|+.|++++|++++..+ ..+..
T Consensus 94 ~ls~N~i~~~-----------------------------------~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~ 138 (149)
T 2je0_A 94 NLSGNKIKDL-----------------------------------STIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKL 138 (149)
T ss_dssp ECTTSCCCSH-----------------------------------HHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHH
T ss_pred ECCCCcCCCh-----------------------------------HHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHH
Confidence 7777766410 011334445555555566666555544 46777
Q ss_pred CCCCCEEEccC
Q 002155 340 LTNLTTLDLSR 350 (959)
Q Consensus 340 l~~L~~L~Ls~ 350 (959)
+++|++|++++
T Consensus 139 l~~L~~L~l~d 149 (149)
T 2je0_A 139 LPQLTYLDGYD 149 (149)
T ss_dssp CTTCCEETTBC
T ss_pred CCCcccccCCC
Confidence 77777777653
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.4e-14 Score=142.91 Aligned_cols=131 Identities=19% Similarity=0.230 Sum_probs=94.2
Q ss_pred cEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCC
Q 002155 140 MVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSN 219 (959)
Q Consensus 140 ~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N 219 (959)
+.+++++|+++.+ |..+ .++|++|++++|.+++..+..|..+++|++|+|++|.|++..+..|..+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 4566666666533 3322 256777777777777555566777788888888888887666666778888888888888
Q ss_pred cCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCC
Q 002155 220 LFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPI 273 (959)
Q Consensus 220 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 273 (959)
.|++..+..+..+++|++|+|++|+++++.+..|..+++|++|+|++|.+.+..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 888766666777888888888888888776666777888888888888776533
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.48 E-value=5.5e-14 Score=138.47 Aligned_cols=105 Identities=19% Similarity=0.105 Sum_probs=70.5
Q ss_pred ceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCc--cccCCCCCCEEE
Q 002155 162 TLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPY--ELGDCISLTTLD 239 (959)
Q Consensus 162 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~--~~~~l~~L~~L~ 239 (959)
+|+.|++++|.+++. ..|..+++|++|+|++|.|++..+..|..+++|++|+|++|.|+. +|. .+..+++|++|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVE-LGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCC-GGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCCc-chhhHhhhcCCCCCEEE
Confidence 555555555555533 456677777777777777775544455777777777777777763 443 677777777777
Q ss_pred cccccCCCCCch----hhhcccCCCeeEcccccCC
Q 002155 240 LGNNNLSGLIPE----KIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 240 L~~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~ 270 (959)
+++|+++.. |. .+..+++|+.|++++|.+.
T Consensus 120 l~~N~i~~~-~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVTNK-KHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGGGS-TTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCCCc-HhHHHHHHHHCCccceeCCCcCCHH
Confidence 777777744 44 3777778888887777653
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.48 E-value=5.3e-14 Score=138.59 Aligned_cols=105 Identities=19% Similarity=0.139 Sum_probs=75.3
Q ss_pred cccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCc--cccCCCCCCEEE
Q 002155 138 PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPK--EIGNLSALSVLD 215 (959)
Q Consensus 138 ~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~--~~~~l~~L~~L~ 215 (959)
+|++|++++|++++. ..+..+++|+.|++++|.+++..+..|..+++|++|+|++|.|+ .+|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 345555555555543 45566677777777777777544455578888888888888887 4555 788888888888
Q ss_pred ccCCcCCccCCc----cccCCCCCCEEEcccccCC
Q 002155 216 LNSNLFDGIIPY----ELGDCISLTTLDLGNNNLS 246 (959)
Q Consensus 216 L~~N~i~~~~~~----~~~~l~~L~~L~L~~N~l~ 246 (959)
+++|.++. .|. .+..+++|++||+++|.+.
T Consensus 120 l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 88888884 444 4888889999999988775
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-15 Score=153.91 Aligned_cols=44 Identities=20% Similarity=0.203 Sum_probs=22.1
Q ss_pred ccCCcCCceEeccCCcccccCC-ccccCCCCCCEEEccCCcCCcc
Q 002155 181 VGNAAALERLVLTNNMLKGHLP-KEIGNLSALSVLDLNSNLFDGI 224 (959)
Q Consensus 181 ~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~N~i~~~ 224 (959)
+..+++|++|+|++|.|++..+ ..+..+++|++|++++|.+.+.
T Consensus 111 ~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 111 IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp HHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred cccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 4445555555555555553211 2455555555555555555443
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.44 E-value=2.5e-13 Score=132.70 Aligned_cols=87 Identities=28% Similarity=0.266 Sum_probs=48.6
Q ss_pred cccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCC-CcccCCCccccc
Q 002155 487 SYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPR-SGICQNLSKISL 565 (959)
Q Consensus 487 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l 565 (959)
++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|+++++. ...+.+|+.+++
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 4455555555555544455555555555555555555554444555555555555555555555553 234455566666
Q ss_pred cCCCCCCC
Q 002155 566 TGNKDLCG 573 (959)
Q Consensus 566 ~~N~~~c~ 573 (959)
.+|+|.|+
T Consensus 110 ~~N~~~c~ 117 (170)
T 3g39_A 110 LNNPWDCA 117 (170)
T ss_dssp CSSCBCTT
T ss_pred CCCCCCCC
Confidence 66666664
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.43 E-value=3.3e-13 Score=131.76 Aligned_cols=112 Identities=19% Similarity=0.152 Sum_probs=101.8
Q ss_pred ccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEe
Q 002155 438 NLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLD 517 (959)
Q Consensus 438 ~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 517 (959)
..+.+++++|+++.+|...+. .++.|+|++|.|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+
T Consensus 10 ~~~~l~~s~n~l~~ip~~~~~-----~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~ 84 (170)
T 3g39_A 10 SGTTVDCSGKSLASVPTGIPT-----TTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLS 84 (170)
T ss_dssp ETTEEECTTSCCSSCCSCCCT-----TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEEeCCCCcCccCccCCC-----CCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEE
Confidence 467899999999999877652 688999999999999999999999999999999999977777789999999999
Q ss_pred CCCCcCCCCCCccccCCCCccEEecccCcCcccCCCC
Q 002155 518 VSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS 554 (959)
Q Consensus 518 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 554 (959)
|++|+|++..+..|..+++|++|+|++|++.+..+..
T Consensus 85 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~l 121 (170)
T 3g39_A 85 LNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDI 121 (170)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGGG
T ss_pred CCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCchhH
Confidence 9999999888888999999999999999999887643
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1.5e-15 Score=152.97 Aligned_cols=154 Identities=24% Similarity=0.266 Sum_probs=95.6
Q ss_pred CCCccccEEecCCCcccccCCc------CccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCccccc
Q 002155 39 GNWNQMESLLLSSNQFIGKIPP------EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEK 112 (959)
Q Consensus 39 ~~l~~L~~L~L~~n~l~~~~~~------~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 112 (959)
.....++.++++.+++.+.+|+ .+..+++|++|+|++|++++ +| .+..+++|++|++++|+++. +|..+..
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~-l~~~~~~ 91 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKK-IENLDAV 91 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECS-CSSHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCccc-ccchhhc
Confidence 3445566666666666666555 66667777777777777763 55 66666677777777776663 3445555
Q ss_pred CCCCceeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccC-ccccCCcCCceEe
Q 002155 113 CSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLP-YEVGNAAALERLV 191 (959)
Q Consensus 113 l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~ 191 (959)
+++|++|++++|.+. +. | .+..+++|++|++++|.+++..+ ..+..+++|++|+
T Consensus 92 ~~~L~~L~L~~N~l~-----------------------~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~ 146 (198)
T 1ds9_A 92 ADTLEELWISYNQIA-----------------------SL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLL 146 (198)
T ss_dssp HHHCSEEEEEEEECC-----------------------CH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEE
T ss_pred CCcCCEEECcCCcCC-----------------------cC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEE
Confidence 555666655555554 32 2 34555666666666666653222 3567777777777
Q ss_pred ccCCcccccCCc----------cccCCCCCCEEEccCCcCC
Q 002155 192 LTNNMLKGHLPK----------EIGNLSALSVLDLNSNLFD 222 (959)
Q Consensus 192 L~~n~i~~~~~~----------~~~~l~~L~~L~L~~N~i~ 222 (959)
+++|.+.+..|. .+..+++|+.|| +|.++
T Consensus 147 l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 147 LAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp ECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred ecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 777777655443 267788888776 56554
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.42 E-value=5.1e-13 Score=130.90 Aligned_cols=104 Identities=23% Similarity=0.250 Sum_probs=69.9
Q ss_pred eccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcC
Q 002155 468 MNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRL 547 (959)
Q Consensus 468 L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 547 (959)
+++++|.++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|..+++|++|+|++|+|
T Consensus 17 l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l 93 (174)
T 2r9u_A 17 VNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHL 93 (174)
T ss_dssp EECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCcc
Confidence 344444443 3344332 5677777777777766677777777777777777777765555667777777777777777
Q ss_pred cccCCC-CcccCCCccccccCCCCCCCC
Q 002155 548 EGMVPR-SGICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 548 ~~~~~~-~~~~~~l~~l~l~~N~~~c~~ 574 (959)
+++++. ...+.+|+.+++.+|+|.|++
T Consensus 94 ~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 94 KSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ceeCHHHhccccCCCEEEeCCCCccccc
Confidence 777665 345677777777888877743
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.40 E-value=6.4e-13 Score=130.16 Aligned_cols=110 Identities=20% Similarity=0.139 Sum_probs=87.9
Q ss_pred ceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCC
Q 002155 440 VGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVS 519 (959)
Q Consensus 440 ~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 519 (959)
+.+++++|+++.+|..++ ..++.|+|++|.|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 15 ~~l~~~~n~l~~iP~~~~-----~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~ 89 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP-----TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLN 89 (174)
T ss_dssp SEEECCSSCCSSCCSCCC-----TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred cEEEeCCCCCCccCCCcC-----CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECC
Confidence 455666666655555443 146667777777776777888899999999999999997666667999999999999
Q ss_pred CCcCCCCCCccccCCCCccEEecccCcCcccCCCC
Q 002155 520 RNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS 554 (959)
Q Consensus 520 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 554 (959)
+|+|++..+..|..+++|++|+|++|++.+.++..
T Consensus 90 ~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~~ 124 (174)
T 2r9u_A 90 DNHLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDI 124 (174)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCBCTTBGGG
T ss_pred CCccceeCHHHhccccCCCEEEeCCCCcccccccH
Confidence 99999877777999999999999999999877643
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.3e-11 Score=138.65 Aligned_cols=312 Identities=11% Similarity=0.130 Sum_probs=148.5
Q ss_pred CcccCCCC-CCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCccccccc
Q 002155 83 PRELCTSE-SLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSE 161 (959)
Q Consensus 83 p~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~ 161 (959)
..+|.+.+ .|+.+.+..+ ++.+...+|.+|++|+.+.+..|... .++.+...+|.++.
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~--------------------~l~~Ig~~aF~~c~ 114 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPS--------------------CVKKIGRQAFMFCS 114 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCC--------------------CCCEECTTTTTTCT
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCC--------------------eeeEechhhchhcc
Confidence 34454442 3566665543 44455556666666666655544211 11222333344444
Q ss_pred ceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcc
Q 002155 162 TLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLG 241 (959)
Q Consensus 162 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 241 (959)
+|+.+.+.++ ++.....+|.++.+|+.+.+..+... ....+|....+|+.+.+..+ ++.+...+|.. .+|+.+.+.
T Consensus 115 ~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~~~~-I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip 190 (394)
T 4gt6_A 115 ELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEGVTS-VADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIP 190 (394)
T ss_dssp TCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEEC
T ss_pred cceeeccCCc-cceehhhhhhhhcccccccccceeee-ecccceecccccccccccce-eeEeccccccc-cceeEEEEC
Confidence 4444444333 22233455556666666666543322 44556666666666666544 33344445543 456666665
Q ss_pred cccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccE
Q 002155 242 NNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVD 321 (959)
Q Consensus 242 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~ 321 (959)
.+-. .+....|....+|+......+..... . ...+......... ...+.....+..
T Consensus 191 ~~~~-~i~~~af~~c~~l~~~~~~~~~~~~~-~---~~~~~~~~~~~~~-------------------~~~~~~~~~~~~ 246 (394)
T 4gt6_A 191 AKVT-RIGTNAFSECFALSTITSDSESYPAI-D---NVLYEKSANGDYA-------------------LIRYPSQREDPA 246 (394)
T ss_dssp TTCC-EECTTTTTTCTTCCEEEECCSSSCBS-S---SCEEEECTTSCEE-------------------EEECCTTCCCSE
T ss_pred Cccc-ccccchhhhccccceecccccccccc-c---ceeeccccccccc-------------------ccccccccccce
Confidence 4432 24445566666666655544332200 0 0000000000000 000011111222
Q ss_pred EEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcC
Q 002155 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKL 401 (959)
Q Consensus 322 L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i 401 (959)
+.+. +.++.+...+|..++.|+.+.+.++... +...+|.++..|+.+.+. +.++.+...+|.++.+|+.+.+..+ +
T Consensus 247 ~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v 322 (394)
T 4gt6_A 247 FKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-I 322 (394)
T ss_dssp EECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-C
T ss_pred EEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-c
Confidence 2221 2233345556666777777776655433 455566666666666664 3344344555666666666666543 4
Q ss_pred CCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeecccc
Q 002155 402 SGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNK 448 (959)
Q Consensus 402 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 448 (959)
+.+...+|.++++|+.+.+..+ ++.....+|.++++|+.+++.++.
T Consensus 323 ~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 323 TQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp CEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred cEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 4344555666666666655433 433444555555555555555543
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.8e-11 Score=137.29 Aligned_cols=331 Identities=14% Similarity=0.221 Sum_probs=203.2
Q ss_pred CcCccCCC-CCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCcc---ccccCCcccccCCCCceeeecccccccccCccc
Q 002155 59 PPEIGNCS-MLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNL---LTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYL 134 (959)
Q Consensus 59 ~~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~---l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~ 134 (959)
..+|.++. .|+.+.+..+ ++.+-..+|.++++|+.+.++.|. ++.+...+|..|.+|+.+.+..+ +
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~-------- 125 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-V-------- 125 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-C--------
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-c--------
Confidence 34577774 5888888764 555667788888999999888764 66667788988888888766433 1
Q ss_pred CCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEE
Q 002155 135 SKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVL 214 (959)
Q Consensus 135 ~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 214 (959)
+.+....|..+.+|+.+.+..+. .......|.+..+|+.+.+.++ ++.....+|.. .+|+.+
T Consensus 126 ---------------~~I~~~aF~~c~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i 187 (394)
T 4gt6_A 126 ---------------TEIDSEAFHHCEELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQI 187 (394)
T ss_dssp ---------------SEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEE
T ss_pred ---------------ceehhhhhhhhccccccccccee-eeecccceecccccccccccce-eeEeccccccc-cceeEE
Confidence 12333445555556666554432 2245566667777777777654 33244555554 567777
Q ss_pred EccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCcccccc
Q 002155 215 DLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQH 294 (959)
Q Consensus 215 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~ 294 (959)
.+..+... +...+|.++.+++......+......-..+........-...... ...
T Consensus 188 ~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~ 243 (394)
T 4gt6_A 188 HIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPS-----------------------QRE 243 (394)
T ss_dssp EECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCT-----------------------TCC
T ss_pred EECCcccc-cccchhhhccccceecccccccccccceeeccccccccccccccc-----------------------ccc
Confidence 77665443 566677777777777766655442211111111111110000000 000
Q ss_pred ccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeC
Q 002155 295 HGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGN 374 (959)
Q Consensus 295 L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 374 (959)
+..+.+. +.+......+|.++..|+.+.+.++..+ +...+|.++++|+.+.+. +.++.+...+|.++.+|+.+.+..
T Consensus 244 ~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~ 320 (394)
T 4gt6_A 244 DPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPE 320 (394)
T ss_dssp CSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCT
T ss_pred cceEEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCC
Confidence 1111111 1222234556777888888888765543 677788888999999886 456657778888888999999876
Q ss_pred cccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccc
Q 002155 375 NQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKL 449 (959)
Q Consensus 375 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 449 (959)
+ ++.+...+|.++.+|+.+.+..+ ++.+...+|.++++|+.+++.++... ...+..+.+|+.+.+..|.+
T Consensus 321 ~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 321 G-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCCCCC----------
T ss_pred c-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCCE
Confidence 5 55566778888999999998754 66577788999999999999887654 14566777888887766654
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.9e-13 Score=151.23 Aligned_cols=118 Identities=19% Similarity=0.114 Sum_probs=66.5
Q ss_pred ccEEeccCCccccccCcccc-----cccceeEEEcccccccc----ccCccccCCcCCceEeccCCcccccC----Cccc
Q 002155 139 LMVLDLDSNNFTGIIPVSIW-----NSETLMEFSAANNLLEG----SLPYEVGNAAALERLVLTNNMLKGHL----PKEI 205 (959)
Q Consensus 139 L~~L~ls~n~l~~~~p~~~~-----~~~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~L~~n~i~~~~----~~~~ 205 (959)
|++|+|++|++++.....++ ..++|++|++++|.|+. .++..+...++|++|+|++|.|++.. +..+
T Consensus 128 L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L 207 (372)
T 3un9_A 128 ARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQL 207 (372)
T ss_dssp EEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHG
T ss_pred ccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHH
Confidence 44455555554433333322 23455555555555543 23334456667777777777776422 4455
Q ss_pred cCCCCCCEEEccCCcCCccC----CccccCCCCCCEEEcccccCCCCCchhhhcc
Q 002155 206 GNLSALSVLDLNSNLFDGII----PYELGDCISLTTLDLGNNNLSGLIPEKIADL 256 (959)
Q Consensus 206 ~~l~~L~~L~L~~N~i~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 256 (959)
...++|++|+|++|.|+... +..+...++|++|+|++|.|+......+..+
T Consensus 208 ~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 262 (372)
T 3un9_A 208 DRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDL 262 (372)
T ss_dssp GGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHC
T ss_pred hcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHH
Confidence 66667777777777776432 2334455677777777777765555555544
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.28 E-value=5e-12 Score=139.50 Aligned_cols=106 Identities=23% Similarity=0.257 Sum_probs=89.9
Q ss_pred eeccCCc-ccCCCCCccccCccccceeeecc-ccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEeccc
Q 002155 467 TMNMSNN-LFDGGLPRSLGNLSYLTNLDLHE-NKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAE 544 (959)
Q Consensus 467 ~L~ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 544 (959)
.++++++ .|++ +|. +..+++|+.|+|++ |+|++..+..|+++++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3566666 6664 666 88889999999996 999977778899999999999999999998888999999999999999
Q ss_pred CcCcccCCCCcccCCCccccccCCCCCCCC
Q 002155 545 NRLEGMVPRSGICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 545 N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~ 574 (959)
|+|+++++.......|+.|++.+|++.|+|
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHCSC 119 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred CccceeCHHHcccCCceEEEeeCCCccCCC
Confidence 999998887655555999999999999964
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.5e-12 Score=143.95 Aligned_cols=133 Identities=17% Similarity=0.119 Sum_probs=92.8
Q ss_pred cccEEeccCCccccccCcccc-cccceeEEEccccccccccCccc-----cCCcCCceEeccCCccccc----CCccccC
Q 002155 138 PLMVLDLDSNNFTGIIPVSIW-NSETLMEFSAANNLLEGSLPYEV-----GNAAALERLVLTNNMLKGH----LPKEIGN 207 (959)
Q Consensus 138 ~L~~L~ls~n~l~~~~p~~~~-~~~~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~L~~n~i~~~----~~~~~~~ 207 (959)
+|++|+|++|++++.....+. .+++|++|++++|.++......+ ...++|++|+|++|.|++. ++..+..
T Consensus 102 ~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~ 181 (372)
T 3un9_A 102 ALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAG 181 (372)
T ss_dssp CEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHT
T ss_pred CceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhc
Confidence 466677777776654433333 35788888888888875544444 2457788888888888642 3444567
Q ss_pred CCCCCEEEccCCcCCccC----CccccCCCCCCEEEcccccCCCCC----chhhhcccCCCeeEcccccCC
Q 002155 208 LSALSVLDLNSNLFDGII----PYELGDCISLTTLDLGNNNLSGLI----PEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 208 l~~L~~L~L~~N~i~~~~----~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
+++|++|+|++|.|+... +..+..+++|++|+|++|.|+... +..+...++|++|+|++|.|+
T Consensus 182 ~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 182 NTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp CSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred CCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCC
Confidence 888888888888887432 455667778888888888887533 334455688888888888775
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=2.8e-11 Score=127.63 Aligned_cols=145 Identities=13% Similarity=0.030 Sum_probs=112.5
Q ss_pred HHhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CCceeccccceecCCceEEEE
Q 002155 676 EATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 676 ~~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 754 (959)
.....|++....+.|+.+.||++... ++.+++|............+.+|+++++.+. +..+.++++++...+..|+||
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 34457888888999999999999864 6889999986532233345888999999884 667888999888888899999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF----------------------------------- 799 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------------------------- 799 (959)
||++|.++.+.... ......++.++++++..||...
T Consensus 90 e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T 3tm0_A 90 SEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp ECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred EecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence 99999998775311 1123467889999999999610
Q ss_pred ---------------------CCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 800 ---------------------TPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 800 ---------------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
...++|||++|.||+++++..+.|+||+.+.
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999876566799999874
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.18 E-value=3.6e-11 Score=132.57 Aligned_cols=104 Identities=17% Similarity=0.121 Sum_probs=86.9
Q ss_pred EEecCCC-cccccCCcCccCCCCCcEEEcCC-CcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecc
Q 002155 46 SLLLSSN-QFIGKIPPEIGNCSMLKSISLSN-NFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFR 123 (959)
Q Consensus 46 ~L~L~~n-~l~~~~~~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 123 (959)
.++++++ ++. .+|. |..+++|++|+|++ |+|++.+|..|.++++|++|+|++|+|+++++..|.++++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4688887 776 6888 88888899999986 888877777888899999999999999988888888999999999888
Q ss_pred cccccccCcccCCCcccEEeccCCcccc
Q 002155 124 NHIYGSIPEYLSKLPLMVLDLDSNNFTG 151 (959)
Q Consensus 124 n~~~~~~p~~~~~~~L~~L~ls~n~l~~ 151 (959)
|++.+.++..+..++|++|+|++|.+..
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CccceeCHHHcccCCceEEEeeCCCccC
Confidence 8888777777777778888888887763
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.4e-09 Score=121.21 Aligned_cols=124 Identities=13% Similarity=0.113 Sum_probs=61.3
Q ss_pred cCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCC
Q 002155 332 KIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGN 411 (959)
Q Consensus 332 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 411 (959)
+...+|..+..|+.+.+..+ ++.+...+|.++.+|+.+.+..+ ++.....+|..+++|+.+.+.++.++.+...+|.+
T Consensus 231 i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~ 308 (379)
T 4h09_A 231 LGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMD 308 (379)
T ss_dssp ECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTT
T ss_pred EccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcC
Confidence 33444455555555555443 33344445555555555555433 33233444555555555555555555444555555
Q ss_pred cccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccc
Q 002155 412 LKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSN 459 (959)
Q Consensus 412 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 459 (959)
+.+|+.+.|..+ ++.....+|.++.+|+.+.+..+ ++.+...+|.+
T Consensus 309 c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~ 354 (379)
T 4h09_A 309 CVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEG 354 (379)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTT
T ss_pred CCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhC
Confidence 555555555433 33333445555555555555443 44455555543
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.9e-09 Score=120.30 Aligned_cols=317 Identities=12% Similarity=0.111 Sum_probs=183.5
Q ss_pred cccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCC
Q 002155 36 SWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSN 115 (959)
Q Consensus 36 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 115 (959)
+|+..-.+|+.+.+.. .++..-..+|.++++|+.++|..+ ++.+-..+|.+. +|+.+.+..+ ++.+...+|..+ +
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~ 114 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-D 114 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-C
T ss_pred cccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-C
Confidence 4455566777777764 344344557888888888888654 554555667765 6777777644 555666777665 6
Q ss_pred CceeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCC
Q 002155 116 LSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNN 195 (959)
Q Consensus 116 L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 195 (959)
|+.+.+..+. .......+...+++...+.. .++.+....|....+++.+....+.........+ ..+
T Consensus 115 L~~i~lp~~~-~~i~~~~F~~~~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~-----------~~~ 181 (379)
T 4h09_A 115 LDDFEFPGAT-TEIGNYIFYNSSVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYV-----------LYN 181 (379)
T ss_dssp CSEEECCTTC-CEECTTTTTTCCCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTE-----------EEE
T ss_pred cccccCCCcc-ccccccccccceeeeeeccc-eeeccccchhcccccccccccccccceeecccce-----------ecc
Confidence 7777776542 22333444444555544433 3444555555566666655554433221100000 000
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCC
Q 002155 196 MLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPS 275 (959)
Q Consensus 196 ~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 275 (959)
... .....+.....+....+..+... +....+..+.+|+.+.+..+ +..+....|.+...|+.+.+..+ ++
T Consensus 182 ~~~-~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~----- 252 (379)
T 4h09_A 182 KNK-TILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT----- 252 (379)
T ss_dssp TTS-SEEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-----
T ss_pred ccc-ceeccccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-----
Confidence 000 12233445555666555544333 45556666677777777544 34455566777777777766543 11
Q ss_pred CCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCC
Q 002155 276 KPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTG 355 (959)
Q Consensus 276 ~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~ 355 (959)
......|.++..|+.+.+..+ ++.+...+|.++++|+.+.+.++.++.
T Consensus 253 -------------------------------~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~ 300 (379)
T 4h09_A 253 -------------------------------SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIET 300 (379)
T ss_dssp -------------------------------EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCE
T ss_pred -------------------------------EeCccccceeehhcccccccc-ceeccccccccccccccccccccccce
Confidence 012234445555555555433 444556677777777777777777776
Q ss_pred CCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcc
Q 002155 356 PIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLK 413 (959)
Q Consensus 356 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~ 413 (959)
+...+|.++.+|+.+.+..+ ++.+...+|.++++|+.+.+..+ ++.+...+|.+.+
T Consensus 301 I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 301 LEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp ECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred ehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 66777777777888777654 55456667888888888877654 5545666776653
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.03 E-value=2.1e-10 Score=120.87 Aligned_cols=129 Identities=15% Similarity=0.067 Sum_probs=95.4
Q ss_pred ccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCc--eeccccceecCCceEEEEEeccCCCHHHH
Q 002155 688 GDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN--LVPLLGYCSFDEEKLLVYEYMVNGSLDLW 765 (959)
Q Consensus 688 g~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 765 (959)
+.|..+.||++...+|+.+++|..... ....+..|+.+++.+.+.+ +.+++++...++..++||||++|.++.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 456669999998877888999987643 2245678999998886544 456888877777889999999998884
Q ss_pred HhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------------
Q 002155 766 LRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF---------------------------------------------- 799 (959)
Q Consensus 766 l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---------------------------------------------- 799 (959)
... .. ...++.++++.+..||...
T Consensus 104 ~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (264)
T 1nd4_A 104 SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR 173 (264)
T ss_dssp TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHH
Confidence 111 11 1256777777888887421
Q ss_pred ---------CCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 800 ---------TPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 800 ---------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
..+++|||++|.||++++++.+.|+|||.+..
T Consensus 174 l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 174 LKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998776677999998753
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.93 E-value=4.3e-10 Score=123.04 Aligned_cols=84 Identities=13% Similarity=0.127 Sum_probs=48.6
Q ss_pred CCcCCceEeccCCcccccCCcccc---CCCCCCEEEccCCcCCccC----CccccCCCCCCEEEcccccCCCCCchhhhc
Q 002155 183 NAAALERLVLTNNMLKGHLPKEIG---NLSALSVLDLNSNLFDGII----PYELGDCISLTTLDLGNNNLSGLIPEKIAD 255 (959)
Q Consensus 183 ~l~~L~~L~L~~n~i~~~~~~~~~---~l~~L~~L~L~~N~i~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 255 (959)
.+++|+.|+|++|.+.+..+..+. .+++|++|+|+.|.|+... +..+..+++|+.|+|++|.|+......+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 456777777777776643333332 3567777777777776532 233345677777777777766433333332
Q ss_pred -ccCCCeeEccccc
Q 002155 256 -LAQLQCLVLSHNN 268 (959)
Q Consensus 256 -l~~L~~L~Ls~N~ 268 (959)
+ ...++++.++
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 2 3456666654
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.84 E-value=4.9e-09 Score=115.87 Aligned_cols=141 Identities=17% Similarity=0.232 Sum_probs=104.1
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEcc--ccc-hhhHHHHHHHHHHHhcCCC--CceeccccceecC---CceEEEEE
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLS--QAK-TQGHREFTAEMETLGKVKH--QNLVPLLGYCSFD---EEKLLVYE 755 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~---~~~~lv~e 755 (959)
.+.++.|.++.||++... +..+++|+.. ... ......+.+|+.+++.+.. ..+.++++++.+. +..|+|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 457899999999999875 4678898876 322 1223467789999998873 4577888877665 45899999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF------------------------------------ 799 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 799 (959)
|++|..+.+.. ...++..++..++.++++.|+.||...
T Consensus 122 ~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 122 FVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred ecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99998774311 123567788889999999999999520
Q ss_pred -------------------CCCeEeCCCCCCCEEECCCCc--EEEcccccccc
Q 002155 800 -------------------TPHIIHRDIKASNILLNEEFE--AKVADFGLARL 831 (959)
Q Consensus 800 -------------------~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~~~~ 831 (959)
..+++|||+++.||+++.++. +.++||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999987753 68999999864
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.81 E-value=1e-09 Score=120.13 Aligned_cols=84 Identities=11% Similarity=0.125 Sum_probs=60.3
Q ss_pred cccceeEEEccccccccccCcccc---CCcCCceEeccCCcccccC----CccccCCCCCCEEEccCCcCCccCCccccC
Q 002155 159 NSETLMEFSAANNLLEGSLPYEVG---NAAALERLVLTNNMLKGHL----PKEIGNLSALSVLDLNSNLFDGIIPYELGD 231 (959)
Q Consensus 159 ~~~~L~~L~l~~n~l~~~~~~~~~---~l~~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 231 (959)
.+++|++|.+.+|.+.+..+..+. .+++|++|+|+.|.|++.. +..+..+++|+.|+|++|.|+...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 467888888888877654433333 5789999999999998643 333456789999999999887554444443
Q ss_pred -CCCCCEEEccccc
Q 002155 232 -CISLTTLDLGNNN 244 (959)
Q Consensus 232 -l~~L~~L~L~~N~ 244 (959)
+ ...++++.++
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 3 4678999887
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.76 E-value=2.5e-09 Score=115.26 Aligned_cols=186 Identities=20% Similarity=0.224 Sum_probs=118.5
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CCc--eeccccceecCC---ceEEEEEec
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQN--LVPLLGYCSFDE---EKLLVYEYM 757 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv~e~~ 757 (959)
.+.++.|....||++. ..+++|+.... .....+.+|+++++.+. +.. +.+++++....+ ..|+||||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999863 56899986533 33456889999998874 322 334444333222 348999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhc---------------------------------------
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG--------------------------------------- 798 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------------------------------------- 798 (959)
+|.++.+.... .++..++..++.++++.++.||..
T Consensus 99 ~G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 99 KGVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CCEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred CCeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 99888653321 245667777888888888888841
Q ss_pred ----------------CCCCeEeCCCCCCCEEECC--CCcEEEcccccccccccccccccc--c-----------ccccc
Q 002155 799 ----------------FTPHIIHRDIKASNILLNE--EFEAKVADFGLARLISACETHVST--D-----------IAGTF 847 (959)
Q Consensus 799 ----------------~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~~~--~-----------~~gt~ 847 (959)
....++|+|++|.||++++ +..+.++||+.+..-.....-... . +....
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHc
Confidence 0135799999999999988 456789999998653211000000 0 00000
Q ss_pred cccC-CCcCCCCCCCCcCcchhHHHHHHHHHhCCCCC
Q 002155 848 GYIP-PEYGQSGRSTTRGDVYSFGVILLELVTGKEPT 883 (959)
Q Consensus 848 ~y~a-PE~~~~~~~~~~~DvwslG~il~elltg~~p~ 883 (959)
++.. |+.... .....+.|++|.++|++.+|..+|
T Consensus 253 ~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 253 KHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1111 111110 112258999999999999999875
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.41 E-value=6.6e-08 Score=95.31 Aligned_cols=114 Identities=14% Similarity=0.136 Sum_probs=71.0
Q ss_pred cccccceeEEEcccc-cccc----ccCccccCCcCCceEeccCCccccc----CCccccCCCCCCEEEccCCcCCcc---
Q 002155 157 IWNSETLMEFSAANN-LLEG----SLPYEVGNAAALERLVLTNNMLKGH----LPKEIGNLSALSVLDLNSNLFDGI--- 224 (959)
Q Consensus 157 ~~~~~~L~~L~l~~n-~l~~----~~~~~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~N~i~~~--- 224 (959)
+...+.|++|++++| .+.. .+...+...++|++|+|++|.|.+. +...+...+.|++|+|++|.|+..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 334455555555555 5542 2334455567777777777777642 234445557788888888877643
Q ss_pred -CCccccCCCCCCEEEc--ccccCCCCC----chhhhcccCCCeeEcccccCC
Q 002155 225 -IPYELGDCISLTTLDL--GNNNLSGLI----PEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 225 -~~~~~~~l~~L~~L~L--~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
+...+...++|++|+| ++|.|+... .+.+...++|++|+|++|.+.
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3455666677888888 778776432 334455577888888877764
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.30 E-value=1.3e-07 Score=97.75 Aligned_cols=59 Identities=25% Similarity=0.363 Sum_probs=32.4
Q ss_pred ccccCccccceeeeccccccccCCcCCcCCC--CCcEEeCCCCcCCCCCCc-------cccCCCCccEEe
Q 002155 481 RSLGNLSYLTNLDLHENKFTGEIPPDLGNLM--QLEYLDVSRNRLCGQIPE-------TMCSLSNLLYLS 541 (959)
Q Consensus 481 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~-------~~~~l~~L~~L~ 541 (959)
..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++..|+ .+..+|+|+.||
T Consensus 190 ~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 190 SIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp THHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 3344566666666666666643 2233333 666666666666654442 245566666554
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.29 E-value=1.9e-07 Score=96.48 Aligned_cols=80 Identities=25% Similarity=0.246 Sum_probs=51.2
Q ss_pred cCCcCCceEeccCCcccc--cCCccccCCCCCCEEEccCCcCCccCCccccCCC--CCCEEEcccccCCCCCc-------
Q 002155 182 GNAAALERLVLTNNMLKG--HLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCI--SLTTLDLGNNNLSGLIP------- 250 (959)
Q Consensus 182 ~~l~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~------- 250 (959)
.++++|+.|+|++|+|++ .++..+..+++|+.|+|++|.|++. ..+..+. +|++|+|++|.+.+..|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 456777777777777775 3345566777777777777777644 2333333 67777777777765333
Q ss_pred hhhhcccCCCeeE
Q 002155 251 EKIADLAQLQCLV 263 (959)
Q Consensus 251 ~~~~~l~~L~~L~ 263 (959)
..+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 2466677777665
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=3.3e-06 Score=88.96 Aligned_cols=135 Identities=18% Similarity=0.129 Sum_probs=95.3
Q ss_pred eeccCCCe-EEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CCceeccccceecCCceEEEEEeccCCCH
Q 002155 686 IIGDGGFG-TVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 686 ~lg~G~~g-~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
.+..|..| .||+.... ++..+++|+-... ...++.+|...++.+. +-.+.++++++.+++..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45556665 69998765 4678999986532 3456778999888774 33466778888888899999999999888
Q ss_pred HHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 002155 763 DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF------------------------------------------- 799 (959)
Q Consensus 763 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------------- 799 (959)
.+...... .....++.+++..+..||...
T Consensus 108 ~~~~~~~~--------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 108 FQVLEEYP--------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHCG--------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred cccccCCH--------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 76543321 122345555666666666321
Q ss_pred ------------CCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 800 ------------TPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 800 ------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
...++|+|+.+.||++++++.+-|+||+.+..
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12378999999999999877777999998853
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=6.4e-06 Score=88.27 Aligned_cols=136 Identities=21% Similarity=0.189 Sum_probs=89.8
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCC---ceecccccee-cCCceEEEEEeccC
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQ---NLVPLLGYCS-FDEEKLLVYEYMVN 759 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~ 759 (959)
.+.++.|....||+. |..+++|+... ......+..|.++++.+.+. .+.+++.+.. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 346888999999988 56789998532 23345788999999998753 2455555553 45567899999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhc-----------------------------------------
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG----------------------------------------- 798 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~----------------------------------------- 798 (959)
..+.+..-. .++..++..++.++++.++.||..
T Consensus 98 ~~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 98 QILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp EECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred eECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 888652110 112233333333344333333321
Q ss_pred ----------------CCCCeEeCCCCCCCEEECC---CCc-EEEcccccccc
Q 002155 799 ----------------FTPHIIHRDIKASNILLNE---EFE-AKVADFGLARL 831 (959)
Q Consensus 799 ----------------~~~~ivH~dlk~~Nill~~---~~~-~kl~Dfg~~~~ 831 (959)
....++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1446799999999999987 455 48999998754
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.17 E-value=2.8e-07 Score=90.72 Aligned_cols=121 Identities=13% Similarity=0.127 Sum_probs=75.2
Q ss_pred CcccccCCCCceeeeccc-ccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEcccccccc----ccCccc
Q 002155 107 EGVFEKCSNLSQLVIFRN-HIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEG----SLPYEV 181 (959)
Q Consensus 107 ~~~~~~l~~L~~L~L~~n-~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~----~~~~~~ 181 (959)
...+...++|++|+|++| .+...-... +...+...++|++|+|++|.|.. .+...+
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~-------------------l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L 89 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKA-------------------CAEALKTNTYVKKFSIVGTRSNDPVAFALAEML 89 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHH-------------------HHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHH-------------------HHHHHHhCCCcCEEECcCCCCChHHHHHHHHHH
Confidence 345556677777777776 654321110 11122223444444444444442 223445
Q ss_pred cCCcCCceEeccCCccccc----CCccccCCCCCCEEEc--cCCcCCcc----CCccccCCCCCCEEEcccccCC
Q 002155 182 GNAAALERLVLTNNMLKGH----LPKEIGNLSALSVLDL--NSNLFDGI----IPYELGDCISLTTLDLGNNNLS 246 (959)
Q Consensus 182 ~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L--~~N~i~~~----~~~~~~~l~~L~~L~L~~N~l~ 246 (959)
...++|++|+|++|.|.+. +..++...+.|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 90 ~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 90 KVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 5567888888888888753 4566777788999999 88988754 3345556688999999999886
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=98.02 E-value=1.9e-06 Score=82.42 Aligned_cols=84 Identities=12% Similarity=0.064 Sum_probs=54.3
Q ss_pred cCCceEeccCCcccccCCccccCCCCCCEEEccCCc-CCccCCccccCC----CCCCEEEcccc-cCCCCCchhhhcccC
Q 002155 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNL-FDGIIPYELGDC----ISLTTLDLGNN-NLSGLIPEKIADLAQ 258 (959)
Q Consensus 185 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l----~~L~~L~L~~N-~l~~~~~~~~~~l~~ 258 (959)
.+|++|||+++.|++..-..+.++++|+.|+|++|. |+...-..++.+ ++|++|+|++| +|++..-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 456677777776666555666677777777777773 554433444443 35777777776 366555556677777
Q ss_pred CCeeEccccc
Q 002155 259 LQCLVLSHNN 268 (959)
Q Consensus 259 L~~L~Ls~N~ 268 (959)
|++|+|++|.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777777764
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=6.9e-06 Score=90.36 Aligned_cols=79 Identities=6% Similarity=-0.008 Sum_probs=53.9
Q ss_pred Cee-ccCCCeEEEEEEcC-------CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCC---CceeccccceecC---
Q 002155 685 NII-GDGGFGTVYKAALP-------DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKH---QNLVPLLGYCSFD--- 747 (959)
Q Consensus 685 ~~l-g~G~~g~V~~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h---~niv~~~~~~~~~--- 747 (959)
+.| +.|....+|+.... +++.+++|...... ......+..|+.+++.+.. -.+.++++++...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 88889999998764 26789999865432 1012356778888887742 2466677766544
Q ss_pred CceEEEEEeccCCCHH
Q 002155 748 EEKLLVYEYMVNGSLD 763 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~ 763 (959)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999987654
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.87 E-value=5.6e-06 Score=79.11 Aligned_cols=85 Identities=11% Similarity=0.048 Sum_probs=53.5
Q ss_pred ceeEEEccccccccccCccccCCcCCceEeccCCc-ccccCCccccCC----CCCCEEEccCCc-CCccCCccccCCCCC
Q 002155 162 TLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNM-LKGHLPKEIGNL----SALSVLDLNSNL-FDGIIPYELGDCISL 235 (959)
Q Consensus 162 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~l----~~L~~L~L~~N~-i~~~~~~~~~~l~~L 235 (959)
+|++|+++++.|+...-..+.++++|++|+|++|. |++..-..+..+ ++|++|+|++|. |+...-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34444444444444444455667777777777774 665555556654 367888887774 765555566777888
Q ss_pred CEEEccccc-CC
Q 002155 236 TTLDLGNNN-LS 246 (959)
Q Consensus 236 ~~L~L~~N~-l~ 246 (959)
++|+|++|. ++
T Consensus 142 ~~L~L~~c~~It 153 (176)
T 3e4g_A 142 KYLFLSDLPGVK 153 (176)
T ss_dssp CEEEEESCTTCC
T ss_pred CEEECCCCCCCC
Confidence 888888874 44
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.85 E-value=0.0001 Score=80.37 Aligned_cols=141 Identities=16% Similarity=0.238 Sum_probs=79.4
Q ss_pred CeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCC--Cceecccc------ceecCCceEEEEEe
Q 002155 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKH--QNLVPLLG------YCSFDEEKLLVYEY 756 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~------~~~~~~~~~lv~e~ 756 (959)
+.|+.|..+.||++...+| .+++|+..... ..+..|..+++.+.. -.+.+++. +...++..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3466678899999987554 58999887521 233345555554431 12333333 11345677999999
Q ss_pred ccCCCHH-----H---------HHhhhcC-C--c-------cccCHHHH-------------------------------
Q 002155 757 MVNGSLD-----L---------WLRNRTG-S--L-------EVLGWDKR------------------------------- 781 (959)
Q Consensus 757 ~~~g~L~-----~---------~l~~~~~-~--~-------~~l~~~~~------------------------------- 781 (959)
++|..+. . .++.... . . ..-.|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 1 1121111 0 0 01122211
Q ss_pred HHHHHHHHHHHHHHHh----------cCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 782 YKIACGAARGLAFLHH----------GFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 782 ~~i~~~i~~~l~~LH~----------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
..+...+..++++|+. ....+++|||+++.||+++.++.+.++||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223445666652 025789999999999999888899999999874
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=4.3e-05 Score=85.26 Aligned_cols=75 Identities=15% Similarity=0.103 Sum_probs=48.6
Q ss_pred CCeeccCCCeEEEEEEcC-CCCEEEEEEccccch-------hhHHHHHHHHHHHhcCCC--Cc-eeccccceecCCceEE
Q 002155 684 TNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT-------QGHREFTAEMETLGKVKH--QN-LVPLLGYCSFDEEKLL 752 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~n-iv~~~~~~~~~~~~~l 752 (959)
.+.+|.|.++.||+++.. +++.++||....... .....+..|.++++.+.. |. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 456999999999999764 468899997643211 123446678888887742 33 3344433 3456789
Q ss_pred EEEeccCC
Q 002155 753 VYEYMVNG 760 (959)
Q Consensus 753 v~e~~~~g 760 (959)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00029 Score=74.61 Aligned_cols=78 Identities=19% Similarity=0.256 Sum_probs=56.9
Q ss_pred CCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCC---ceeccccceecCCceEEEEEec
Q 002155 681 FCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQ---NLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~ 757 (959)
..-.+.+|.|..+.||+.+..||+.|+||+...........+..|++.|+.+.-. .+.+++++ +..++||||+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEee
Confidence 3345679999999999999999999999987654444445688899998888422 23444433 3458999999
Q ss_pred cCCCH
Q 002155 758 VNGSL 762 (959)
Q Consensus 758 ~~g~L 762 (959)
+++..
T Consensus 93 ~~~~~ 97 (288)
T 3f7w_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred cccCC
Confidence 87654
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00022 Score=75.81 Aligned_cols=139 Identities=18% Similarity=0.182 Sum_probs=91.2
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCC---CCceeccccceecCCceEEEEEeccCC
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK---HQNLVPLLGYCSFDEEKLLVYEYMVNG 760 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~g 760 (959)
.+.|+.|....+|+... ++..+++|+.... ....+..|.+.++.+. ...+.+++++...++..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 35689999999999987 5678999987543 2456788998888884 256778888877778899999999987
Q ss_pred CHHH-----------HHhhhcC--C----------------ccccCHHHHH---HHH----------------HHHHHH-
Q 002155 761 SLDL-----------WLRNRTG--S----------------LEVLGWDKRY---KIA----------------CGAARG- 791 (959)
Q Consensus 761 ~L~~-----------~l~~~~~--~----------------~~~l~~~~~~---~i~----------------~~i~~~- 791 (959)
.+.. .++.... . ...-+|.... ++. ..++..
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6521 1222211 0 0011344322 111 111111
Q ss_pred HHHHH-hcCCCCeEeCCCCCCCEEECCCCcEEEcccc
Q 002155 792 LAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFG 827 (959)
Q Consensus 792 l~~LH-~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 827 (959)
...|. ......++|+|+.+.|++++.++ +.+.|++
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 22332 12256899999999999999887 8899974
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00029 Score=79.12 Aligned_cols=79 Identities=9% Similarity=0.120 Sum_probs=48.3
Q ss_pred CCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccccccc-ccccccCCCcCCCC---CCCCcCcchhHHHHHHH
Q 002155 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIA-GTFGYIPPEYGQSG---RSTTRGDVYSFGVILLE 875 (959)
Q Consensus 800 ~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~-gt~~y~aPE~~~~~---~~~~~~DvwslG~il~e 875 (959)
...++|||++|.||+++.++ ++++||+.+..-...-. ...... -...|.+|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D-la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD-IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH-HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH-HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 67899999999999998876 99999998865321111 000000 11345666544311 11223445577888888
Q ss_pred HHhCC
Q 002155 876 LVTGK 880 (959)
Q Consensus 876 lltg~ 880 (959)
.+++.
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87753
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00022 Score=64.94 Aligned_cols=38 Identities=24% Similarity=0.210 Sum_probs=20.8
Q ss_pred ccEEecccCcCcccCCCC-cccCCCccccccCCCCCCCC
Q 002155 537 LLYLSLAENRLEGMVPRS-GICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 537 L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~~ 574 (959)
|++|+|++|+|+.+++.. ..+.+|+.+++.+|||.|+|
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC 71 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDC 71 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSG
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccC
Confidence 444444444444444332 12344556678889999964
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0001 Score=71.86 Aligned_cols=109 Identities=19% Similarity=0.174 Sum_probs=65.3
Q ss_pred cceeEEEcccc-cccc----ccCccccCCcCCceEeccCCcccccC----CccccCCCCCCEEEccCCcCCccC----Cc
Q 002155 161 ETLMEFSAANN-LLEG----SLPYEVGNAAALERLVLTNNMLKGHL----PKEIGNLSALSVLDLNSNLFDGII----PY 227 (959)
Q Consensus 161 ~~L~~L~l~~n-~l~~----~~~~~~~~l~~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~L~~N~i~~~~----~~ 227 (959)
+.|++|+|++| .|.. .+-+.+..-+.|+.|+|++|.|.+.. .+++..-+.|+.|+|++|.|+... .+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 34444444443 4432 23344555677778888888776533 333445677888888888886432 33
Q ss_pred cccCCCCCCEEEcccc---cCCCC----CchhhhcccCCCeeEcccccC
Q 002155 228 ELGDCISLTTLDLGNN---NLSGL----IPEKIADLAQLQCLVLSHNNL 269 (959)
Q Consensus 228 ~~~~l~~L~~L~L~~N---~l~~~----~~~~~~~l~~L~~L~Ls~N~l 269 (959)
++..-+.|++|+|++| .+... +.+.+..-+.|+.|+++.|.+
T Consensus 121 aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 4455567888888765 33321 234566667888888877654
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0033 Score=67.70 Aligned_cols=161 Identities=15% Similarity=0.131 Sum_probs=90.3
Q ss_pred cccCHHHHHHHhcCCCC-----CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCc--eec
Q 002155 667 MRLTLVHILEATNNFCK-----TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN--LVP 739 (959)
Q Consensus 667 ~~~~~~~~~~~~~~f~~-----~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~ 739 (959)
..++.+.+......|.. ...++ |....||++...+|+.+++|...... .....+..|..+++.+.... +++
T Consensus 9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~ 86 (328)
T 1zyl_A 9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAA 86 (328)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecc
Confidence 34455555555444433 23466 88889999887778789999986321 12345667888777774222 344
Q ss_pred cccc-----eecCCceEEEEEeccCCCHH-----HH---------HhhhcC-----CccccCHHHH----HHH-------
Q 002155 740 LLGY-----CSFDEEKLLVYEYMVNGSLD-----LW---------LRNRTG-----SLEVLGWDKR----YKI------- 784 (959)
Q Consensus 740 ~~~~-----~~~~~~~~lv~e~~~~g~L~-----~~---------l~~~~~-----~~~~l~~~~~----~~i------- 784 (959)
++.. ...++..++||||++|..+. .+ ++.... .....++... ..+
T Consensus 87 ~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (328)
T 1zyl_A 87 PVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLI 166 (328)
T ss_dssp CCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSS
T ss_pred eeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcC
Confidence 4443 12245567899999875432 11 111110 0011222110 000
Q ss_pred --------HHHHHHHHHHHHhc----CCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 785 --------ACGAARGLAFLHHG----FTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 785 --------~~~i~~~l~~LH~~----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
...+...++.+... ....++|||+++.||+++ + .+.++||+.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 167 PSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111222332211 145789999999999999 4 899999988753
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00097 Score=71.78 Aligned_cols=160 Identities=10% Similarity=0.098 Sum_probs=88.1
Q ss_pred cCHHHHHHHhcCCCCC-----CeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCc--eeccc
Q 002155 669 LTLVHILEATNNFCKT-----NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN--LVPLL 741 (959)
Q Consensus 669 ~~~~~~~~~~~~f~~~-----~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~ 741 (959)
++.+++.....+|... +.|+.|....+|++...+| .+++|...... ....+..|..+++.+...+ +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 4455565555566653 3466788899999987655 68899876521 1234556777777664222 23333
Q ss_pred cc------eecCCceEEEEEeccCCCHHH--------------HHhhhcC---Cc-----cccCHHHHHH----------
Q 002155 742 GY------CSFDEEKLLVYEYMVNGSLDL--------------WLRNRTG---SL-----EVLGWDKRYK---------- 783 (959)
Q Consensus 742 ~~------~~~~~~~~lv~e~~~~g~L~~--------------~l~~~~~---~~-----~~l~~~~~~~---------- 783 (959)
.. ....+..++||+|++|..+.. .++.... .. ....|...+.
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 122356789999999865311 1121110 00 0011222110
Q ss_pred --HHHHHHHHHHHHHhc----CCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 784 --IACGAARGLAFLHHG----FTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 784 --i~~~i~~~l~~LH~~----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+...+.+.+++++.. ...+++|+|+.+.||++++++.+.++||+.+..
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011134445555421 135799999999999998876668999998753
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0013 Score=69.95 Aligned_cols=71 Identities=10% Similarity=0.064 Sum_probs=44.5
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCce-eccccceecCCceEEEEEec-cCCC
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNL-VPLLGYCSFDEEKLLVYEYM-VNGS 761 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~~g~ 761 (959)
.+.|+.|....+|++ +.+++|+....... ..+...|+.+++.+...++ .+++++ ..+.-++|+||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 567999999999998 56888887643211 1123467777777643333 344443 344568999999 6554
Q ss_pred H
Q 002155 762 L 762 (959)
Q Consensus 762 L 762 (959)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0029 Score=68.31 Aligned_cols=141 Identities=16% Similarity=0.113 Sum_probs=72.6
Q ss_pred eeccCCCeE-EEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCC--ceeccccceecCCceEEEEEeccCCCH
Q 002155 686 IIGDGGFGT-VYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQ--NLVPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 686 ~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
.|+.|+... +|+....+|+.+++|....... ..+..|+.+++.+... .+.+++.+.... -++|||++++..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCcch
Confidence 465555554 6777764477788876543221 2234566666666322 244555543322 3789999987777
Q ss_pred HHHHhhhcC----------------------CccccCHHHHH-------H-H------------HHHHHHHHHHHH---h
Q 002155 763 DLWLRNRTG----------------------SLEVLGWDKRY-------K-I------------ACGAARGLAFLH---H 797 (959)
Q Consensus 763 ~~~l~~~~~----------------------~~~~l~~~~~~-------~-i------------~~~i~~~l~~LH---~ 797 (959)
.+++..... ....++..... . + ...+...++.+. .
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 655432110 00111111100 0 0 001112222221 1
Q ss_pred cCCCCeEeCCCCCCCEEECCC----CcEEEcccccccc
Q 002155 798 GFTPHIIHRDIKASNILLNEE----FEAKVADFGLARL 831 (959)
Q Consensus 798 ~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~~~~ 831 (959)
.....++|||+.+.||+++.+ +.+.++||+.+..
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 114689999999999999875 6899999998864
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00018 Score=70.09 Aligned_cols=86 Identities=14% Similarity=0.201 Sum_probs=55.8
Q ss_pred cceeEEEcccccccc----ccCccccCCcCCceEeccCCccccc----CCccccCCCCCCEEEccCC---cCCcc----C
Q 002155 161 ETLMEFSAANNLLEG----SLPYEVGNAAALERLVLTNNMLKGH----LPKEIGNLSALSVLDLNSN---LFDGI----I 225 (959)
Q Consensus 161 ~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~N---~i~~~----~ 225 (959)
+.|++|+|++|.|.. .+.+.+..-+.|++|+|++|.|.+. +.+++..-+.|++|+|++| .|... +
T Consensus 70 ~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~i 149 (197)
T 1pgv_A 70 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDM 149 (197)
T ss_dssp SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHH
T ss_pred CCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHH
Confidence 445555555555542 2234445667888888888888753 3345666778999999865 44422 3
Q ss_pred CccccCCCCCCEEEcccccCC
Q 002155 226 PYELGDCISLTTLDLGNNNLS 246 (959)
Q Consensus 226 ~~~~~~l~~L~~L~L~~N~l~ 246 (959)
...+..-+.|++|+++.|.+.
T Consensus 150 a~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 150 MMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHhCCCcCeEeccCCCcc
Confidence 445666788999999887654
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.001 Score=60.47 Aligned_cols=60 Identities=20% Similarity=0.197 Sum_probs=46.2
Q ss_pred ceeeecccccc-ccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccC
Q 002155 490 TNLDLHENKFT-GEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMV 551 (959)
Q Consensus 490 ~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 551 (959)
..++.+++.++ ..+|..+. ++|++|+|++|+|+.+.+..|..+++|+.|+|++|++...-
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC 71 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDC 71 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSG
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccC
Confidence 36777788775 35665543 46889999999998777788888999999999999887543
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0017 Score=71.03 Aligned_cols=143 Identities=15% Similarity=0.141 Sum_probs=82.5
Q ss_pred CCeeccCCCeEEEEEEcC--------CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCc-eeccccceecCCceEEEE
Q 002155 684 TNIIGDGGFGTVYKAALP--------DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN-LVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~ 754 (959)
.+.+..|-...+|++... +++.|++|+.... ......+.+|.++++.+...+ ..++++++.. .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 346777888999999874 2478999986332 223455668998888874322 3455655532 3999
Q ss_pred EeccCCCHHH-----------H------HhhhcC-Ccccc--CHHHHHHHHHHHHH-------------------HHHHH
Q 002155 755 EYMVNGSLDL-----------W------LRNRTG-SLEVL--GWDKRYKIACGAAR-------------------GLAFL 795 (959)
Q Consensus 755 e~~~~g~L~~-----------~------l~~~~~-~~~~l--~~~~~~~i~~~i~~-------------------~l~~L 795 (959)
||++|..+.. . ++.... ..... -+.+..++..++.. .++.|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9999865531 0 111110 01111 23445555544322 12222
Q ss_pred ----Hh-cCCCCeEeCCCCCCCEEECCC----CcEEEcccccccc
Q 002155 796 ----HH-GFTPHIIHRDIKASNILLNEE----FEAKVADFGLARL 831 (959)
Q Consensus 796 ----H~-~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~~~~ 831 (959)
.. .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 21 113468999999999999876 7899999998864
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0014 Score=73.38 Aligned_cols=73 Identities=19% Similarity=0.203 Sum_probs=48.5
Q ss_pred CCeeccCCCeEEEEEEcCC--------CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCce-eccccceecCCceEEEE
Q 002155 684 TNIIGDGGFGTVYKAALPD--------GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNL-VPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~ 754 (959)
.+.|+.|....||++...+ ++.+++|+...... ...+..|..+++.+...++ .++++.+.. .+||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 3468888899999998653 57899998743211 1345578888888753333 455655432 3899
Q ss_pred EeccCCCH
Q 002155 755 EYMVNGSL 762 (959)
Q Consensus 755 e~~~~g~L 762 (959)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986443
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0029 Score=69.52 Aligned_cols=73 Identities=14% Similarity=0.149 Sum_probs=43.3
Q ss_pred CeeccCCCeEEEEEEcCC---------CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCc-eeccccceecCCceEEEE
Q 002155 685 NIIGDGGFGTVYKAALPD---------GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN-LVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~ 754 (959)
+.++.|....+|++...+ ++.+++|+....... ..+...|..+++.+...+ +.++++.. .-++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec----CCcEEE
Confidence 457788889999998653 268888987543221 112356787777775333 33555433 237899
Q ss_pred EeccCCCH
Q 002155 755 EYMVNGSL 762 (959)
Q Consensus 755 e~~~~g~L 762 (959)
||++|..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0081 Score=67.46 Aligned_cols=73 Identities=12% Similarity=0.075 Sum_probs=46.5
Q ss_pred CeeccCCCeEEEEEEcCC-CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCce-eccccceecCCceEEEEEeccCCCH
Q 002155 685 NIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNL-VPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
+.|+.|-...+|++...+ +..+++|+....... .-+...|..+++.+...++ .++++++. + ..||||++|.++
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 468888899999998764 478889876432211 1122578888888865444 45666552 2 359999987544
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=96.08 E-value=0.016 Score=62.53 Aligned_cols=32 Identities=28% Similarity=0.377 Sum_probs=28.2
Q ss_pred CCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 800 ~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
...++|+|+.+.||++++++.+.++||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35799999999999999888899999988754
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=96.03 E-value=0.021 Score=55.73 Aligned_cols=103 Identities=16% Similarity=0.124 Sum_probs=67.5
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
.+|.+.++... .++++.++|.++.|.+++|.-.-. .+.-..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 33 vSL~eIL~~~~---~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRLYN---QPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHHcC---CCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc---------
Confidence 37899998876 589999999999999999877621 11111222346899999999998774 2110
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p 882 (959)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123456888753 3445677899999999998875555
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=94.88 E-value=0.046 Score=60.48 Aligned_cols=74 Identities=8% Similarity=0.103 Sum_probs=47.8
Q ss_pred CCeeccCCCeEEEEEEcCC--------CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCc-eeccccceecCCceEEEE
Q 002155 684 TNIIGDGGFGTVYKAALPD--------GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN-LVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~ 754 (959)
.+.+..|-...+|++...+ ++.|++|+..... ...-+..+|.++++.+...+ ..++++.+ .-+.||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF----PEGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEEE
Confidence 3467778889999998753 5789999865422 11223357888887774323 34455433 237899
Q ss_pred EeccCCCH
Q 002155 755 EYMVNGSL 762 (959)
Q Consensus 755 e~~~~g~L 762 (959)
||++|..+
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998754
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=89.60 E-value=0.76 Score=50.52 Aligned_cols=30 Identities=30% Similarity=0.445 Sum_probs=25.3
Q ss_pred CeEeCCCCCCCEEE------CCCCcEEEcccccccc
Q 002155 802 HIIHRDIKASNILL------NEEFEAKVADFGLARL 831 (959)
Q Consensus 802 ~ivH~dlk~~Nill------~~~~~~kl~Dfg~~~~ 831 (959)
.++|+|+.+.||++ +++..++++||-+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4567899999998864
|
| >2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A | Back alignment and structure |
|---|
Probab=87.05 E-value=0.59 Score=32.24 Aligned_cols=6 Identities=17% Similarity=0.302 Sum_probs=2.5
Q ss_pred hhhhhh
Q 002155 593 AFGLAG 598 (959)
Q Consensus 593 ~~~~~~ 598 (959)
+.+++|
T Consensus 15 a~~vVG 20 (44)
T 2jwa_A 15 ISAVVG 20 (44)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333444
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 959 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 4e-68 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 1e-67 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 1e-64 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 4e-64 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 4e-63 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 5e-62 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 3e-61 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 2e-60 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 4e-59 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 6e-59 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 8e-59 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 6e-58 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 9e-58 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 2e-57 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-57 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 4e-57 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 4e-57 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 4e-57 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 7e-57 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 7e-56 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 2e-55 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 7e-55 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 8e-55 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 9e-55 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-54 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 5e-54 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-53 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 2e-53 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-53 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 4e-52 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 8e-52 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 4e-50 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 3e-49 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 3e-48 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 2e-46 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 4e-46 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 5e-46 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-45 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 7e-45 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 8e-45 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 9e-45 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 2e-44 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-44 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 3e-44 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 4e-44 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 6e-44 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-42 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 5e-42 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 7e-42 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 8e-42 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-41 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 4e-41 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 3e-40 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-39 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 3e-38 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 7e-38 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 4e-37 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 9e-35 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 3e-33 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 2e-32 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 3e-32 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 1e-27 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-23 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-19 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 3e-27 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 5e-23 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 7e-22 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-21 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 9e-21 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-15 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 5e-22 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-21 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-17 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 5e-15 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 9e-15 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-05 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 3e-18 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 5e-17 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-15 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 2e-13 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 2e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 5e-13 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 9e-12 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-11 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 7e-11 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 6e-07 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 1e-12 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 2e-08 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 7e-08 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 1e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 6e-10 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 1e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 7e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 8e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 1e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 1e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 3e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 5e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 6e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.002 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 2e-09 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 3e-09 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 5e-09 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 3e-05 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 3e-04 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 5e-04 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 6e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-09 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 9e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 6e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 9e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 8e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 6e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.001 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.003 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 4e-09 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 1e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 8e-09 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 4e-08 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 9e-07 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.004 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 2e-07 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 6e-07 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 7e-06 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 4e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 3e-07 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 6e-06 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 5e-05 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.004 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 6e-07 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 2e-05 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.001 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 1e-06 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 1e-06 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 3e-06 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 1e-05 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 8e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 3e-06 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 5e-05 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.002 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 6e-06 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 2e-05 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 5e-04 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 6e-06 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 1e-05 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 2e-04 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 226 bits (577), Expect = 4e-68
Identities = 73/283 (25%), Positives = 120/283 (42%), Gaps = 23/283 (8%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLV 738
IG G FGTVYK V + ++ Q + F E+ L K +H N++
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 739 PLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG 798
+GY + + +V ++ SL L E K IA A+G+ +LH
Sbjct: 68 LFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFE---MIKLIDIARQTAQGMDYLHA- 122
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE-THVSTDIAGTFGYIPPEY--- 854
IIHRD+K++NI L+E+ K+ DFGLA + S +H ++G+ ++ PE
Sbjct: 123 --KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 855 GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914
+ + DVY+FG++L EL+TG+ P N + + +G + L
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLP-------YSNINNRDQIIFMVGRGYLSPDLSK 233
Query: 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957
M R+ +CL RP +L ++ +
Sbjct: 234 VRSNCPK-----AMKRLMAECLKKKRDERPLFPQILASIELLA 271
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 224 bits (573), Expect = 1e-67
Identities = 81/278 (29%), Positives = 124/278 (44%), Gaps = 23/278 (8%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLV 738
+G G FG V+ VAVK L Q F AE + +++HQ LV
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71
Query: 739 PLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG 798
L + E ++ EYM NGSL +L+ +G L +K +A A G+AF+
Sbjct: 72 RLYAVVT-QEPIYIITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG 858
+ IHRD++A+NIL+++ K+ADFGLARLI E + PE G
Sbjct: 128 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 185
Query: 859 RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918
T + DV+SFG++L E+VT P + E V Q +++G ++ P
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE-------VIQNLERGY--RMVRPDNCP 236
Query: 919 ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+ +M C + P RPT ++ L++
Sbjct: 237 EELYQLMRL-------CWKERPEDRPTFDYLRSVLEDF 267
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 216 bits (550), Expect = 1e-64
Identities = 60/278 (21%), Positives = 113/278 (40%), Gaps = 23/278 (8%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLV 738
+ +G G FG V VA+K + + EF E + + + H+ LV
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62
Query: 739 PLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG 798
L G C+ ++ EYM NG L +LR + + ++ + +L
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ---TQQLLEMCKDVCEAMEYLES- 118
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG 858
+HRD+ A N L+N++ KV+DFGL+R + E S + PPE
Sbjct: 119 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 176
Query: 859 RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918
+ +++ D+++FGV++ E+ + + F + E + + +G + P + +
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-------TAEHIAQGL--RLYRPHLAS 227
Query: 919 ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+M C + RPT +L + ++
Sbjct: 228 EKVYTIMYS-------CWHEKADERPTFKILLSNILDV 258
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 215 bits (548), Expect = 4e-64
Identities = 68/278 (24%), Positives = 113/278 (40%), Gaps = 23/278 (8%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLV 738
+ IG G FG V+ + VA+K + + +F E E + K+ H LV
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLV 63
Query: 739 PLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG 798
L G C LV+E+M +G L +LR + G + + G+ +
Sbjct: 64 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA---AETLLGMCLDVCEGM---AYL 117
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG 858
+IHRD+ A N L+ E KV+DFG+ R + + ST + PE
Sbjct: 118 EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 177
Query: 859 RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918
R +++ DV+SFGV++ E+ + + + E V + + G + P + +
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-------VVEDISTGF--RLYKPRLAS 228
Query: 919 ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+M C + P RP +L+ L EI
Sbjct: 229 THVYQIMNH-------CWKERPEDRPAFSRLLRQLAEI 259
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 213 bits (542), Expect = 4e-63
Identities = 79/278 (28%), Positives = 119/278 (42%), Gaps = 23/278 (8%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLV 738
+ +G G FG V+ VA+K L T F E + + K++H+ LV
Sbjct: 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 75
Query: 739 PLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG 798
L S + +V EYM GSL +L+ TG + +A A G+A++
Sbjct: 76 QLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLR--LPQLVDMAAQIASGMAYVER- 131
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG 858
+ +HRD++A+NIL+ E KVADFGLARLI E + PE G
Sbjct: 132 --MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 189
Query: 859 RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918
R T + DV+SFG++L EL T P + E V ++++G P
Sbjct: 190 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQVERGYRMPC--PPECP 240
Query: 919 ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+M + C P RPT ++ FL++
Sbjct: 241 ESLHDLMCQ-------CWRKEPEERPTFEYLQAFLEDY 271
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 210 bits (536), Expect = 5e-62
Identities = 74/293 (25%), Positives = 117/293 (39%), Gaps = 29/293 (9%)
Query: 687 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF 746
IG G FG V++ G+ VAVK S + + AE+ ++H+N++ + +
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSS-REERSWFREAEIYQTVMLRHENILGFIAADNK 68
Query: 747 DEEKL----LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF--- 799
D LV +Y +GSL +L T + + K+A A GLA LH
Sbjct: 69 DNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGT 123
Query: 800 --TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS---TDIAGTFGYIPPEY 854
P I HRD+K+ NIL+ + +AD GLA + + GT Y+ PE
Sbjct: 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 183
Query: 855 ------GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKD---IEGGNLVGWVFQKMKK 905
+ S R D+Y+ G++ E+ G ++M+K
Sbjct: 184 LDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRK 243
Query: 906 GQAADVLDPTVL-TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957
L P + S + M +I +C N A R T L + K L ++
Sbjct: 244 VVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 209 bits (532), Expect = 3e-61
Identities = 74/313 (23%), Positives = 119/313 (38%), Gaps = 39/313 (12%)
Query: 677 ATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKH 734
++F K + +G G G V+K + P G +A K + R E++ L +
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63
Query: 735 QNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAF 794
+V G D E + E+M GSLD L+ + K++ +GL +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTY 119
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY 854
L I+HRD+K SNIL+N E K+ DFG++ + ++ GT Y+ PE
Sbjct: 120 LREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPER 174
Query: 855 GQSGRSTTRGDVYSFGVILLELVTGKEP----------------------TGPEFKDIEG 892
Q + + D++S G+ L+E+ G+ P P G
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 234
Query: 893 GNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGD----CLSDNPAMRPTMLH 948
L + ++LD V K D CL NPA R +
Sbjct: 235 RPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQ 294
Query: 949 VLK--FLKEIKVE 959
++ F+K E
Sbjct: 295 LMVHAFIKRSDAE 307
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 205 bits (522), Expect = 2e-60
Identities = 80/280 (28%), Positives = 127/280 (45%), Gaps = 29/280 (10%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLV 738
IG G FG V G VAVK + T + F AE + +++H NLV
Sbjct: 7 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 63
Query: 739 PLLGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH 797
LLG ++ L +V EYM GSL +LR+R S VLG D K + + +L
Sbjct: 64 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEAMEYLEG 121
Query: 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQS 857
+ +HRD+ A N+L++E+ AKV+DFGL + S+ + + PE +
Sbjct: 122 ---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK----LPVKWTAPEALRE 174
Query: 858 GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917
+ +T+ DV+SFG++L E+ + P + V +++KG D D
Sbjct: 175 KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPRVEKGYKMDAPD---- 223
Query: 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957
+ + +C + AMRP+ L + + L+ IK
Sbjct: 224 -----GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 258
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 203 bits (516), Expect = 4e-59
Identities = 83/281 (29%), Positives = 123/281 (43%), Gaps = 31/281 (11%)
Query: 685 NIIGDGGFGTVYKAALPDGKT----VAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVP 739
+IG G FG VY L D AVK L++ G +F E + H N++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 740 LLGYCSFDEEK-LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG 798
LLG C E L+V YM +G L ++RN T + A+G+ FL
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT---VKDLIGFGLQVAKGMKFLAS- 148
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYG 855
+HRD+ A N +L+E+F KVADFGLAR + E H T ++ E
Sbjct: 149 --KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 206
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915
Q+ + TT+ DV+SFGV+L EL+T P P+ + + + +G+ +L P
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-------ITVYLLQGR--RLLQPE 257
Query: 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+MLK C MRP+ ++ + I
Sbjct: 258 YCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAI 291
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 202 bits (513), Expect = 6e-59
Identities = 79/306 (25%), Positives = 128/306 (41%), Gaps = 47/306 (15%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAKTQGHR-EFTAEMETLGK 731
NN IG+G FG V++A P VAVK L + + + +F E + +
Sbjct: 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 72
Query: 732 VKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSL------------------ 773
+ N+V LLG C+ + L++EYM G L+ +LR+ +
Sbjct: 73 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 132
Query: 774 --EVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831
L ++ IA A G+A+L +HRD+ N L+ E K+ADFGL+R
Sbjct: 133 GPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRN 189
Query: 832 I-SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI 890
I SA + A ++PPE R TT DV+++GV+L E+ +
Sbjct: 190 IYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE 249
Query: 891 EGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVL 950
E V ++ G + A + L++ + C S PA RP+ +
Sbjct: 250 E-------VIYYVRDGN---------ILACPENCPLELYNLMRLCWSKLPADRPSFCSIH 293
Query: 951 KFLKEI 956
+ L+ +
Sbjct: 294 RILQRM 299
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 201 bits (512), Expect = 8e-59
Identities = 72/301 (23%), Positives = 125/301 (41%), Gaps = 40/301 (13%)
Query: 674 ILEATNNFCKT---------NIIGDGGFGTVYKAALP----DGKTVAVKKLSQAKT-QGH 719
EA F K +IG G FG V L VA+K L T +
Sbjct: 12 PNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR 71
Query: 720 REFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWD 779
R+F +E +G+ H N++ L G + +++ E+M NGSLD +LR G
Sbjct: 72 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT---VI 128
Query: 780 KRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI----SAC 835
+ + G A G+ +L + +HRD+ A NIL+N KV+DFGL+R + S
Sbjct: 129 QLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 185
Query: 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNL 895
+ + PE Q + T+ DV+S+G+++ E+++ E + D+ ++
Sbjct: 186 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMTNQDV 242
Query: 896 VGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955
+ + Q + D + ++ DC + RP ++ L +
Sbjct: 243 INAIEQDYRLPPPMDCPS-------------ALHQLMLDCWQKDRNHRPKFGQIVNTLDK 289
Query: 956 I 956
+
Sbjct: 290 M 290
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 198 bits (505), Expect = 6e-58
Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 23/279 (8%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNL 737
+ + +G G +G VY+ TVAVK L + + EF E + ++KH NL
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNL 75
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH 797
V LLG C+ + ++ E+M G+L +LR + + +A + + +L
Sbjct: 76 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEK 133
Query: 798 GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQS 857
+ IHRD+ A N L+ E KVADFGL+RL++ + PE
Sbjct: 134 ---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 190
Query: 858 GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917
+ + + DV++FGV+L E+ T + + Q ++L+
Sbjct: 191 NKFSIKSDVWAFGVLLWEIATYGMS----------------PYPGIDLSQVYELLEKDYR 234
Query: 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+ K+ + C NP+ RP+ + + + +
Sbjct: 235 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 198 bits (504), Expect = 9e-58
Identities = 62/287 (21%), Positives = 119/287 (41%), Gaps = 30/287 (10%)
Query: 677 ATNNFCKTNI-IGDGGFGTVYKAALPDGKT---VAVKKLSQAKTQGHRE-FTAEMETLGK 731
+N +I +G G FG+V + K VA+K L Q + E E + + +
Sbjct: 6 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ 65
Query: 732 VKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARG 791
+ + +V L+G C E +LV E G L +L + + ++ + G
Sbjct: 66 LDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIP---VSNVAELLHQVSMG 121
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH--VSTDIAGTFGY 849
+ +L + +HRD+ A N+LL AK++DFGL++ + A +++ + +
Sbjct: 122 MKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKW 178
Query: 850 IPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909
PE + ++R DV+S+GV + E ++ + + K E V +++G+
Sbjct: 179 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-------VMAFIEQGKRM 231
Query: 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+ P + +M C RP L V + ++
Sbjct: 232 EC--PPECPPELYALMSD-------CWIYKWEDRPDFLTVEQRMRAC 269
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 197 bits (501), Expect = 2e-57
Identities = 69/286 (24%), Positives = 124/286 (43%), Gaps = 30/286 (10%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDG-----KTVAVKKLSQAKTQGHR-EFTAEMETLGKV 732
+ + +IG G FG VYK L VA+K L T+ R +F E +G+
Sbjct: 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66
Query: 733 KHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGL 792
H N++ L G S + +++ EYM NG+LD +LR + G + + G A G+
Sbjct: 67 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFS---VLQLVGMLRGIAAGM 123
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE--THVSTDIAGTFGYI 850
+L + + +HRD+ A NIL+N KV+DFGL+R++ T+ ++ +
Sbjct: 124 KYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT 180
Query: 851 PPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910
PE + T+ DV+SFG+++ E++T E + ++ +
Sbjct: 181 APEAISYRKFTSASDVWSFGIVMWEVMTYGER----------------PYWELSNHEVMK 224
Query: 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
++ + ++ C A RP ++ L ++
Sbjct: 225 AINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 270
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 197 bits (502), Expect = 2e-57
Identities = 63/277 (22%), Positives = 112/277 (40%), Gaps = 30/277 (10%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS 745
+GDG FG VYKA A K + + ++ E++ L H N+V LL
Sbjct: 20 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 79
Query: 746 FDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIH 805
++ ++ E+ G++D + L + + L +LH IIH
Sbjct: 80 YENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHD---NKIIH 133
Query: 806 RDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY-----GQSGRS 860
RD+KA NIL + + K+ADFG++ + + GT ++ PE +
Sbjct: 134 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS-FIGTPYWMAPEVVMCETSKDRPY 192
Query: 861 TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTAD 920
+ DV+S G+ L+E+ + P ++ V K+ K + + P+ +++
Sbjct: 193 DYKADVWSLGITLIEMAEIEPP----HHELNPMR----VLLKIAKSEPPTLAQPSRWSSN 244
Query: 921 SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKE 955
K + K L N R T +L+ F+
Sbjct: 245 FKDFLKKCLEK-------NVDARWTTSQLLQHPFVTV 274
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 196 bits (500), Expect = 4e-57
Identities = 67/299 (22%), Positives = 127/299 (42%), Gaps = 28/299 (9%)
Query: 663 EQPLMRL-TLVHILEATNNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHR 720
E+ L +L ++V + + + + IG G GTVY A + G+ VA+++++ +
Sbjct: 3 EEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62
Query: 721 EFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDK 780
E+ + + K+ N+V L +E +V EY+ GSL + +
Sbjct: 63 LIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD-----EGQ 117
Query: 781 RYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS 840
+ + L FLH +IHRDIK+ NILL + K+ DFG I+ E
Sbjct: 118 IAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT-PEQSKR 173
Query: 841 TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900
+ + GT ++ PE + D++S G++ +E++ G+ P +
Sbjct: 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP----YL----NENPLRAL 225
Query: 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKEIK 957
+ ++ +P L+A + + + L + + R + +L+ FLK K
Sbjct: 226 YLIATNGTPELQNPEKLSAIFRDFLNRCLDM-------DVEKRGSAKELLQHQFLKIAK 277
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 197 bits (501), Expect = 4e-57
Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 35/278 (12%)
Query: 681 FCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGH---REFTAEMETLGKVKHQN 736
F IG G FG VY A + + + VA+KK+S + Q + ++ E+ L K++H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
+ G + LV EY + + DL ++ L + + GA +GLA+LH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP----LQEVEIAAVTHGALQGLAYLH 132
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY-- 854
++IHRD+KA NILL+E K+ DFG A +++ + V GT ++ PE
Sbjct: 133 S---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFV-----GTPYWMAPEVIL 184
Query: 855 -GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913
G+ + DV+S G+ +EL K P + N + ++ + + L
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERKPP-------LFNMNAMSALYHIAQNE--SPALQ 235
Query: 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+ + + CL P RPT +LK
Sbjct: 236 SGHWSEYFRNFVDS-------CLQKIPQDRPTSEVLLK 266
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 197 bits (501), Expect = 4e-57
Identities = 79/301 (26%), Positives = 123/301 (40%), Gaps = 41/301 (13%)
Query: 679 NNFCKTNIIGDGGFGTVYKAAL------PDGKTVAVKKLSQAKTQGHRE-FTAEMETLGK 731
N +G G FG V +A TVAVK L + RE +E++ L
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 732 VK-HQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLE--------------VL 776
+ H N+V LLG C+ L++ EY G L +LR + S L
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 777 GWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836
+ + A+G+AFL + IHRD+ A NILL K+ DFGLAR I
Sbjct: 143 DLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 837 TH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNL 895
+ V + ++ PE + T DV+S+G+ L EL + P G +
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP------GMPV 253
Query: 896 VGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955
++ +K+G +L P A+ +M C +P RPT +++ +++
Sbjct: 254 DSKFYKMIKEGF--RMLSPEHAPAEMYDIMKT-------CWDADPLKRPTFKQIVQLIEK 304
Query: 956 I 956
Sbjct: 305 Q 305
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 194 bits (495), Expect = 7e-57
Identities = 61/280 (21%), Positives = 112/280 (40%), Gaps = 27/280 (9%)
Query: 680 NFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKT--QGHREFTAEMETLGKVKHQN 736
++ IG G +G K DGK + K+L + +E+ L ++KH N
Sbjct: 5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64
Query: 737 LVPLLGYCSFDEEKLL--VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAF 794
+V L V EY G L + T + L + ++ L
Sbjct: 65 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 124
Query: 795 LH--HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP 852
H ++HRD+K +N+ L+ + K+ DFGLAR+++ +T + GT Y+ P
Sbjct: 125 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKAFVGTPYYMSP 183
Query: 853 EYGQSGRSTTRGDVYSFGVILLELVTGKEP-TGPEFKDIEGGNLVGWVFQKMKKGQAADV 911
E + D++S G +L EL P T K++ K+++G+ +
Sbjct: 184 EQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL---------AGKIREGKFRRI 234
Query: 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
P + + ++ + L+ RP++ +L+
Sbjct: 235 --PYRYSDELNEIITR-------MLNLKDYHRPSVEEILE 265
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 192 bits (489), Expect = 7e-56
Identities = 64/279 (22%), Positives = 112/279 (40%), Gaps = 31/279 (11%)
Query: 685 NIIGDGGFGTVYKAALPD---GKTVAVKKLSQAKTQG--HREFTAEMETLGKVKHQNLVP 739
+G G FGTV K KTVAVK L E AE + ++ + +V
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF 799
++G C + +LV E G L+ +L+ + ++ + G+ +L
Sbjct: 73 MIGICEAES-WMLVMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLEE-- 125
Query: 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD--IAGTFGYIPPEYGQS 857
+ +HRD+ A N+LL + AK++DFGL++ + A E + + PE
Sbjct: 126 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 184
Query: 858 GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917
+ +++ DV+SFGV++ E + + K E V ++KG+ P
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKGERMGC--PAGC 235
Query: 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+ +M C + + RP V L+
Sbjct: 236 PREMYDLMNL-------CWTYDVENRPGFAAVELRLRNY 267
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 191 bits (485), Expect = 2e-55
Identities = 64/276 (23%), Positives = 112/276 (40%), Gaps = 28/276 (10%)
Query: 686 IIGDGGFGTVYKAALPD----GKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQNLVPL 740
IG+G FG V++ VA+K + RE F E T+ + H ++V L
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 741 LGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT 800
+G + + ++ E G L +L+ R SL+ A + LA+L
Sbjct: 74 IGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLD---LASLILYAYQLSTALAYLES--- 126
Query: 801 PHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRS 860
+HRDI A N+L++ K+ DFGL+R + + ++ ++ PE R
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 186
Query: 861 TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTAD 920
T+ DV+ FGV + E++ K+ + V +++ G+ + P
Sbjct: 187 TSASDVWMFGVCMWEILMHGVKPFQGVKNND-------VIGRIENGERLPM--PPNCPPT 237
Query: 921 SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+M K C + +P+ RP + L I
Sbjct: 238 LYSLMTK-------CWAYDPSRRPRFTELKAQLSTI 266
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 189 bits (481), Expect = 7e-55
Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 34/280 (12%)
Query: 685 NIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKT--QGHREFTAEMETLGKVKHQNLVPLL 741
IG G F TVYK + VA +L K + F E E L ++H N+V
Sbjct: 15 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY 74
Query: 742 GYCSFDEEK----LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH 797
+ +LV E M +G+L +L+ +V+ +GL FLH
Sbjct: 75 DSWESTVKGKKCIVLVTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLHT 130
Query: 798 GFTPHIIHRDIKASNILLNEE-FEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQ 856
TP IIHRD+K NI + K+ D GLA L + + GT ++ PE
Sbjct: 131 R-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK---RASFAKAVIGTPEFMAPEM-Y 185
Query: 857 SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916
+ DVY+FG+ +LE+ T + P +++++ G D
Sbjct: 186 EEKYDESVDVYAFGMCMLEMATSEYP-------YSECQNAAQIYRRVTSGVKPASFDKVA 238
Query: 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLK 954
+ ++ I C+ N R ++ +L F +
Sbjct: 239 IP--------EVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 190 bits (484), Expect = 8e-55
Identities = 77/295 (26%), Positives = 124/295 (42%), Gaps = 38/295 (12%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKT---VAVKKLSQAKT-QGHREFTAEMETLGKV-K 733
N+ ++IG+G FG V KA + A+K++ + + HR+F E+E L K+
Sbjct: 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69
Query: 734 HQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNR------------TGSLEVLGWDKR 781
H N++ LLG C L EY +G+L +LR + L +
Sbjct: 70 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 129
Query: 782 YKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVST 841
A ARG+ +L IHRD+ A NIL+ E + AK+ADFGL+R T
Sbjct: 130 LHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK--T 184
Query: 842 DIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901
++ E TT DV+S+GV+L E+V+ E +++
Sbjct: 185 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-------LYE 237
Query: 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
K+ +G + P + +M + C + P RP+ +L L +
Sbjct: 238 KLPQGY--RLEKPLNCDDEVYDLMRQ-------CWREKPYERPSFAQILVSLNRM 283
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 189 bits (480), Expect = 9e-55
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 32/277 (11%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKH 734
+F +G G FG VY A +A+K L +A K + E+E ++H
Sbjct: 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65
Query: 735 QNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAF 794
N++ L GY L+ EY G++ L+ + + A L++
Sbjct: 66 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSY 121
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY 854
H +IHRDIK N+LL E K+ADFG + + + GT Y+PPE
Sbjct: 122 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT---TLCGTLDYLPPEM 175
Query: 855 GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914
+ + D++S GV+ E + GK P F+ N ++++ + + P
Sbjct: 176 IEGRMHDEKVDLWSLGVLCYEFLVGKPP----FE----ANTYQETYKRISRV---EFTFP 224
Query: 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
+T ++ ++ ++L+ NP+ RP + VL+
Sbjct: 225 DFVTEGARDLISRLLKH-------NPSQRPMLREVLE 254
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 189 bits (482), Expect = 2e-54
Identities = 73/304 (24%), Positives = 123/304 (40%), Gaps = 46/304 (15%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPD------GKTVAVKKLSQAKTQGHRE-FTAEMETLGK 731
N ++G G FG V A VAVK L + RE +E++ + +
Sbjct: 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96
Query: 732 V-KHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLE---------------- 774
+ H+N+V LLG C+ L++EY G L +LR++
Sbjct: 97 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 156
Query: 775 ---VLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831
VL ++ A A+G+ FL +HRD+ A N+L+ K+ DFGLAR
Sbjct: 157 DLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARD 213
Query: 832 ISACETHVS-TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI 890
I + +V + ++ PE G T + DV+S+G++L E+ + P
Sbjct: 214 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP----- 268
Query: 891 EGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVL 950
G + ++ ++ G D P T + +M C + + RP+ ++
Sbjct: 269 -GIPVDANFYKLIQNGFKMD--QPFYATEEIYIIMQS-------CWAFDSRKRPSFPNLT 318
Query: 951 KFLK 954
FL
Sbjct: 319 SFLG 322
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (475), Expect = 5e-54
Identities = 59/283 (20%), Positives = 109/283 (38%), Gaps = 28/283 (9%)
Query: 679 NNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQN 736
++ +G+G +G V A + VAVK + + E E+ + H+N
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
+V G+ + L EY G L + G + + G+ +LH
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVYLH 120
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC-ETHVSTDIAGTFGYIPPEYG 855
I HRDIK N+LL+E K++DFGLA + + + GT Y+ PE
Sbjct: 121 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 856 QSGR-STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914
+ DV+S G++L ++ G+ + + + K+ + +
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGE-------LPWDQPSDSCQEYSDWKEKK-TYLNPW 229
Query: 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKE 955
+ + ++ K+L NP+ R T+ + K + +
Sbjct: 230 KKIDSAPLALLHKILVE-------NPSARITIPDIKKDRWYNK 265
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (475), Expect = 1e-53
Identities = 73/294 (24%), Positives = 129/294 (43%), Gaps = 31/294 (10%)
Query: 671 LVHILEATNNFCKTNIIGDGGFGTVYKA-ALPDGKT----VAVKKLSQAKT-QGHREFTA 724
L+ IL+ T F K ++G G FGTVYK +P+G+ VA+K+L +A + + ++E
Sbjct: 2 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 60
Query: 725 EMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKI 784
E + V + ++ LLG C L+ + M G L ++R ++ G
Sbjct: 61 EAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNI---GSQYLLNW 116
Query: 785 ACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET-HVSTDI 843
A+G+ +L ++HRD+ A N+L+ K+ DFGLA+L+ A E + +
Sbjct: 117 CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 844 AGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKM 903
++ E T + DV+S+GV + EL+T E + +
Sbjct: 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSIL 226
Query: 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957
+KG+ P + T D +M+K C + RP ++ ++
Sbjct: 227 EKGERLP--QPPICTIDVYMIMVK-------CWMIDADSRPKFRELIIEFSKMA 271
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 186 bits (473), Expect = 2e-53
Identities = 73/293 (24%), Positives = 122/293 (41%), Gaps = 33/293 (11%)
Query: 679 NNFCKTNIIGDGGFGTVYKAAL------PDGKTVAVKKLSQAKTQGHR-EFTAEMETLGK 731
+ +G G FG VY+ VA+K +++A + R EF E + +
Sbjct: 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79
Query: 732 VKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEV------LGWDKRYKIA 785
++V LLG S + L++ E M G L +LR+ ++ K ++A
Sbjct: 80 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 139
Query: 786 CGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE-THVSTDIA 844
A G+A+L+ +HRD+ A N ++ E+F K+ DFG+ R I +
Sbjct: 140 GEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 196
Query: 845 GTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904
++ PE + G TT DV+SFGV+L E+ T E + + V + +
Sbjct: 197 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-------VLRFVM 249
Query: 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957
+G D D + + C NP MRP+ L ++ +KE
Sbjct: 250 EGGLLDKPD---------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 293
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 185 bits (470), Expect = 2e-53
Identities = 65/288 (22%), Positives = 104/288 (36%), Gaps = 31/288 (10%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQ---AKTQGHREFTAEMETLGK 731
+ +GDG FG V + +VAVK L ++ + +F E+ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 732 VKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARG 791
+ H+NL+ L G +V E GSL LR G + A A G
Sbjct: 68 LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEG 123
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH--VSTDIAGTFGY 849
+ +L IHRD+ A N+LL K+ DFGL R + + H + F +
Sbjct: 124 MGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 850 IPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909
PE ++ + D + FGV L E+ T + + + K+ K
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-------ILHKIDKEGER 233
Query: 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957
+ + C + P RPT + + FL E +
Sbjct: 234 LPRPEDC--------PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 273
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 184 bits (468), Expect = 4e-52
Identities = 62/289 (21%), Positives = 112/289 (38%), Gaps = 30/289 (10%)
Query: 673 HILEATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGK 731
H+L +++ +G G FG V++ G A K + E++T+
Sbjct: 23 HVL---DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSV 79
Query: 732 VKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARG 791
++H LV L D E +++YE+M G L + + + D+ + +G
Sbjct: 80 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMS---EDEAVEYMRQVCKG 136
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEF--EAKVADFGLARLISACETHVSTDIAGTFGY 849
L +H + +H D+K NI+ + E K+ DFGL + ++ T GT +
Sbjct: 137 LCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--TGTAEF 191
Query: 850 IPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909
PE + D++S GV+ L++G P G N +
Sbjct: 192 AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP-------FGGENDDETLRNVKSCDWNM 244
Query: 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKEI 956
D + ++ D K + K+L +P R T+ L+ +L
Sbjct: 245 DDSAFSGISEDGKDFIRKLLLA-------DPNTRMTIHQALEHPWLTPG 286
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (461), Expect = 8e-52
Identities = 75/300 (25%), Positives = 120/300 (40%), Gaps = 40/300 (13%)
Query: 679 NNFCKTNIIGDGGFGTVYKA------ALPDGKTVAVKKLSQAKTQG-HREFTAEMETLGK 731
+ +G G FG V +A +TVAVK L + T HR +E++ L
Sbjct: 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72
Query: 732 VKHQNLVPLLGYCSFDEEK--LLVYEYMVNGSLDLWLRNRTGSL------------EVLG 777
+ H V L +++ E+ G+L +LR++ + L
Sbjct: 73 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132
Query: 778 WDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837
+ + A+G+ FL IHRD+ A NILL+E+ K+ DFGLAR I
Sbjct: 133 LEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 189
Query: 838 HV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLV 896
+V D ++ PE T + DV+SFGV+L E+ + P K E
Sbjct: 190 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----- 244
Query: 897 GWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+++K+G D +M + DC P+ RPT +++ L +
Sbjct: 245 -EFCRRLKEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 176 bits (448), Expect = 4e-50
Identities = 84/301 (27%), Positives = 126/301 (41%), Gaps = 42/301 (13%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALP--------DGKTVAVKKLSQAKTQGH-REFTAEMETL 729
+ +G+G FG V A VAVK L T+ + +EME +
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 730 GKV-KHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNR------------TGSLEVL 776
+ KH+N++ LLG C+ D ++ EY G+L +L+ R E L
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 132
Query: 777 GWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836
A ARG+ +L IHRD+ A N+L+ E+ K+ADFGLAR I +
Sbjct: 133 SSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
Query: 837 THVSTD-IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNL 895
+ T ++ PE T + DV+SFGV+L E+ T P G
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-------GVP 242
Query: 896 VGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955
V +F+ +K+G D P+ T + MM C P+ RPT +++ L
Sbjct: 243 VEELFKLLKEGHRMD--KPSNCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLDR 293
Query: 956 I 956
I
Sbjct: 294 I 294
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (441), Expect = 3e-49
Identities = 67/278 (24%), Positives = 109/278 (39%), Gaps = 30/278 (10%)
Query: 680 NFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQ 735
+F I+G+G F TV A L + A+K L + K T E + + ++ H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 736 NLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL 795
V L DE+ Y NG L ++R L +L
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEYL 124
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC-ETHVSTDIAGTFGYIPPEY 854
H IIHRD+K NILLNE+ ++ DFG A+++S + + GT Y+ PE
Sbjct: 125 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 181
Query: 855 GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914
+ D+++ G I+ +LV G P GN +FQK+ K + P
Sbjct: 182 LTEKSACKSSDLWALGCIIYQLVAGLPP-------FRAGNEYL-IFQKIIKL---EYDFP 230
Query: 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952
++ ++ K+L + + R + +
Sbjct: 231 EKFFPKARDLVEKLLVL-------DATKRLGCEEMEGY 261
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 173 bits (439), Expect = 3e-48
Identities = 54/275 (19%), Positives = 102/275 (37%), Gaps = 31/275 (11%)
Query: 687 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS 745
+G G FG V++ G+ K ++ E+ + ++ H L+ L
Sbjct: 37 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 96
Query: 746 FDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIH 805
E +L+ E++ G L + + + A GL +H I+H
Sbjct: 97 DKYEMVLILEFLSGGELFDRIAAEDYKMS---EAEVINYMRQACEGLKHMHE---HSIVH 150
Query: 806 RDIKASNILL--NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTR 863
DIK NI+ + K+ DFGLA ++ + T + PE
Sbjct: 151 LDIKPENIMCETKKASSVKIIDFGLATKLN--PDEIVKVTTATAEFAAPEIVDREPVGFY 208
Query: 864 GDVYSFGVILLELVTGKEP-TGPEFKDIEGGNLVGWVFQKMKKGQAADVLD-PTVLTADS 921
D+++ GV+ L++G P G + + Q +K+ D + ++ ++
Sbjct: 209 TDMWAIGVLGYVLLSGLSPFAGEDDLET---------LQNVKRCDWEFDEDAFSSVSPEA 259
Query: 922 KPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLK 954
K + +L+ P R T+ L+ +LK
Sbjct: 260 KDFIKNLLQK-------EPRKRLTVHDALEHPWLK 287
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 168 bits (426), Expect = 2e-46
Identities = 68/287 (23%), Positives = 115/287 (40%), Gaps = 35/287 (12%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKT---QGHREFTAE---METLGK 731
N+F IIG GGFG VY D GK A+K L + + QG E + +
Sbjct: 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63
Query: 732 VKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARG 791
+V + ++ + + M G L L E A G
Sbjct: 64 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE----ADMRFYAAEIILG 119
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
L +H+ +++RD+K +NILL+E +++D GLA S + H S GT GY+
Sbjct: 120 LEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMA 173
Query: 852 PEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910
PE Q G + + D +S G +L +L+ G P F+ + + + +
Sbjct: 174 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP----FRQHKTKDK----HEIDRMTLTMA 225
Query: 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957
V P + + + ++ +L+ + R L + +E+K
Sbjct: 226 VELPDSFSPELRSLLEGLLQR-------DVNRRLGCLG--RGAQEVK 263
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 165 bits (419), Expect = 4e-46
Identities = 54/276 (19%), Positives = 99/276 (35%), Gaps = 22/276 (7%)
Query: 678 TNNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQ 735
+ + +++G G F V A K VA+K +++ +G E+ L K+KH
Sbjct: 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHP 67
Query: 736 NLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL 795
N+V L L+ + + G L + + ++ + +L
Sbjct: 68 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK----GFYTERDASRLIFQVLDAVKYL 123
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG 855
H H + L+E+ + ++DFGL+++ V + GT GY+ PE
Sbjct: 124 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED--PGSVLSTACGTPGYVAPEVL 181
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915
+ D +S GVI L+ G P N Q +K D
Sbjct: 182 AQKPYSKAVDCWSIGVIAYILLCGYPP-------FYDENDAKLFEQILKAEYEFDSPYWD 234
Query: 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
++ +K + ++ +P R T L+
Sbjct: 235 DISDSAKDFIRHLMEK-------DPEKRFTCEQALQ 263
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 165 bits (420), Expect = 5e-46
Identities = 52/274 (18%), Positives = 95/274 (34%), Gaps = 28/274 (10%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS 745
+G G FG V++ KT K + T E+ L +H+N++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLHESFE 71
Query: 746 FDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIH 805
EE ++++E++ + + L + L FLH +I H
Sbjct: 72 SMEELVMIFEFISGLDIFERINTSAFELN---EREIVSYVHQVCEALQFLHS---HNIGH 125
Query: 806 RDIKASNILL--NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTR 863
DI+ NI+ K+ +FG AR + + Y PE Q +T
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF--TAPEYYAPEVHQHDVVSTA 183
Query: 864 GDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKP 923
D++S G ++ L++G P + M D ++ ++
Sbjct: 184 TDMWSLGTLVYVLLSGINP-------FLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236
Query: 924 MMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKE 955
+ ++L R T L+ +LK+
Sbjct: 237 FVDRLLVK-------ERKSRMTASEALQHPWLKQ 263
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 163 bits (413), Expect = 2e-45
Identities = 73/292 (25%), Positives = 115/292 (39%), Gaps = 22/292 (7%)
Query: 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQN 736
+ IG+G +G VYKA G+T A+KK+ K E+ L ++KH N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
+V L + +LV+E++ L G L G+A+ H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG----LESVTAKSFLLQLLNGIAYCH 117
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQ 856
++HRD+K N+L+N E E K+ADFGLAR + +I + P
Sbjct: 118 D---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG 174
Query: 857 SGRSTTRGDVYSFGVILLELVTGKEPTGPE---------FKDIEGGNLVGW--VFQKMKK 905
S + +T D++S G I E+V G F+ + N W V + K
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234
Query: 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKE 955
V +P + K + + + L +P R T L+ + KE
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 161 bits (408), Expect = 7e-45
Identities = 62/295 (21%), Positives = 106/295 (35%), Gaps = 42/295 (14%)
Query: 680 NFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKT---------QGHREFTAEMETL 729
N+ I+G G V + P K AVK + + E++ L
Sbjct: 4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63
Query: 730 GKVK-HQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGA 788
KV H N++ L + LV++ M G L +L + L + KI
Sbjct: 64 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKIMRAL 119
Query: 789 ARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFG 848
+ LH +I+HRD+K NILL+++ K+ DFG + + ++ GT
Sbjct: 120 LEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD--PGEKLREVCGTPS 174
Query: 849 YIPPEYGQSGRSTTRG------DVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902
Y+ PE + + D++S GVI+ L+ G P + +
Sbjct: 175 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP-------FWHRKQMLMLRMI 227
Query: 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKE 955
M + + K ++ + L + P R T L F ++
Sbjct: 228 MSGNYQFGSPEWDDYSDTVKDLVSRFLVV-------QPQKRYTAEEALAHPFFQQ 275
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 161 bits (409), Expect = 8e-45
Identities = 67/293 (22%), Positives = 109/293 (37%), Gaps = 22/293 (7%)
Query: 680 NFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKL--SQAKTQGHREFTAEMETLGKVKHQN 736
NF K IG+G +G VYKA G+ VA+KK+ E+ L ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
+V LL + + LV+E++ + + +GLAF H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLAFCH 119
Query: 797 HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQ 856
++HRD+K N+L+N E K+ADFGLAR + ++ + P
Sbjct: 120 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 857 SGRSTTRGDVYSFGVILLELVTGKEP-TGPEFKDI------EGGNLVGWVFQKMKKGQAA 909
+T D++S G I E+VT + G D G V+ +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 910 DVLDPTVLTADSKPMMLKMLRIAGD----CLSDNPAMRPTMLHVLK--FLKEI 956
P D ++ + L +P R + L F +++
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 161 bits (407), Expect = 9e-45
Identities = 69/284 (24%), Positives = 117/284 (41%), Gaps = 31/284 (10%)
Query: 678 TNNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQG---HREFTAEMETLGKVK 733
++ + I+G GG V+ A L + VAVK L + + F E + +
Sbjct: 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65
Query: 734 HQNLVPLLGYCSFDEEKL----LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA 789
H +V + + +V EY+ +L + + + ++ A
Sbjct: 66 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADAC 121
Query: 790 RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV--STDIAGTF 847
+ L F H IIHRD+K +NI+++ KV DFG+AR I+ V + + GT
Sbjct: 122 QALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 178
Query: 848 GYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907
Y+ PE + R DVYS G +L E++TG+ P G + V +Q +++
Sbjct: 179 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP-------FTGDSPVSVAYQHVREDP 231
Query: 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951
L+AD ++LK L+ NP R ++
Sbjct: 232 IPPSARHEGLSADLDAVVLK-------ALAKNPENRYQTAAEMR 268
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 162 bits (410), Expect = 2e-44
Identities = 65/309 (21%), Positives = 124/309 (40%), Gaps = 38/309 (12%)
Query: 674 ILEATNNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGK 731
+ + + + IG+G +G V A + VA+KK+S + Q + + E++ L +
Sbjct: 3 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 62
Query: 732 VKHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARG 791
+H+N++ + + + Y+V + L + + L D RG
Sbjct: 63 FRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT-QHLSNDHICYFLYQILRG 121
Query: 792 LAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS--TDIAGTFGY 849
L ++H +++HRD+K SN+LLN + K+ DFGLAR+ H T+ T Y
Sbjct: 122 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 178
Query: 850 IPPEYGQSGRSTTR-GDVYSFGVILLELVTGK--------------------EPTGPEFK 888
PE + + T+ D++S G IL E+++ + P+ +
Sbjct: 179 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 238
Query: 889 DIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLH 948
I ++ K + + + ++ KML NP R +
Sbjct: 239 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTF-------NPHKRIEVEQ 291
Query: 949 VLK--FLKE 955
L +L++
Sbjct: 292 ALAHPYLEQ 300
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 160 bits (406), Expect = 2e-44
Identities = 65/304 (21%), Positives = 105/304 (34%), Gaps = 31/304 (10%)
Query: 677 ATNNFCKTNIIGDGGFGTVYKA--ALPDGKTVAVKKLSQAKTQGHREFT-----AEMETL 729
A + IG+G +G V+KA G+ VA+K++ + + A + L
Sbjct: 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64
Query: 730 GKVKHQNLVPLLGYCSFDEEKLLVYEYMV-----NGSLDLWLRNRTGSLEVLGWDKRYKI 784
+H N+V L C+ +V + + + +
Sbjct: 65 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVP---TETIKDM 121
Query: 785 ACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIA 844
RGL FLH ++HRD+K NIL+ + K+ADFGLAR+ S T +
Sbjct: 122 MFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVV 176
Query: 845 GTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE---------FKDIEGGNL 895
T Y PE T D++S G I E+ K I
Sbjct: 177 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 236
Query: 896 VGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FL 953
W QA + + + CL+ NPA R + L +
Sbjct: 237 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 296
Query: 954 KEIK 957
++++
Sbjct: 297 QDLE 300
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 160 bits (406), Expect = 3e-44
Identities = 65/286 (22%), Positives = 110/286 (38%), Gaps = 34/286 (11%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHRE---FTAEMETLGKV-K 733
+F ++G G FG V+ A + A+K L + + E L +
Sbjct: 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61
Query: 734 HQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLA 793
H L + E V EY+ G L +++ + A GL
Sbjct: 62 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----FDLSRATFYAAEIILGLQ 117
Query: 794 FLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE 853
FLH I++RD+K NILL+++ K+ADFG+ + + +T GT YI PE
Sbjct: 118 FLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT-FCGTPDYIAPE 173
Query: 854 YGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913
+ D +SFGV+L E++ G+ P F + L + +
Sbjct: 174 ILLGQKYNHSVDWWSFGVLLYEMLIGQSP----FHGQDEEELFHSIRMD-------NPFY 222
Query: 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK---FLKEI 956
P L ++K +++K+ P R + ++ +EI
Sbjct: 223 PRWLEKEAKDLLVKLFVR-------EPEKRLGVRGDIRQHPLFREI 261
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 160 bits (404), Expect = 4e-44
Identities = 50/288 (17%), Positives = 96/288 (33%), Gaps = 28/288 (9%)
Query: 679 NNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNL 737
N + IG G FG +Y + G+ VA+K H + E + ++
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLEC--VKTKHPQLHIESKIYKMMQGGVG 64
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH 797
+P + +C + + ++ ++ SL+ + +A + ++H
Sbjct: 65 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFS---LKTVLLLADQMISRIEYIHS 121
Query: 798 GFTPHIIHRDIKASNILLNEE---FEAKVADFGLARLISACETHV------STDIAGTFG 848
+ IHRD+K N L+ + DFGLA+ TH + ++ GT
Sbjct: 122 ---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR 178
Query: 849 YIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908
Y + R D+ S G +L+ G P QK ++
Sbjct: 179 YASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA--------TKRQKYERISE 230
Query: 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+ P + P C S +P ++ + + +
Sbjct: 231 KKMSTPIEVLCKGYPSEFA--TYLNFCRSLRFDDKPDYSYLRQLFRNL 276
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 159 bits (404), Expect = 6e-44
Identities = 58/284 (20%), Positives = 113/284 (39%), Gaps = 30/284 (10%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQ---AKTQGHREFTAEMETLGKVKH 734
+F +G G FG V+ + +G+ A+K L + + + E L V H
Sbjct: 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63
Query: 735 QNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAF 794
++ + G ++ ++ +Y+ G L LR + ++
Sbjct: 64 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCL-------A 116
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY 854
L + + II+RD+K NILL++ K+ DFG A+ + V+ + GT YI PE
Sbjct: 117 LEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP----DVTYTLCGTPDYIAPEV 172
Query: 855 GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914
+ D +SFG+++ E++ G P N + ++K+ ++ P
Sbjct: 173 VSTKPYNKSIDWWSFGILIYEMLAGYTP-------FYDSNTMK-TYEKILNA---ELRFP 221
Query: 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKEI 956
D K ++ +++ D ++ V + KE+
Sbjct: 222 PFFNEDVKDLLSRLITR--DLSQRLGNLQNGTEDVKNHPWFKEV 263
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (390), Expect = 2e-42
Identities = 63/284 (22%), Positives = 115/284 (40%), Gaps = 46/284 (16%)
Query: 686 IIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHRE------FTAEMETLGKVK--HQN 736
++G GGFG+VY + D VA+K + + + E E+ L KV
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796
++ LL + + +L+ E G+L+ + + H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ---EELARSFFWQVLEAVRHCH 127
Query: 797 HGFTPHIIHRDIKASNILLNEE-FEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG 855
+ ++HRDIK NIL++ E K+ DFG L+ + V TD GT Y PPE+
Sbjct: 128 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 181
Query: 856 QSGRSTTRG-DVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914
+ R R V+S G++L ++V G P F+ ++ V
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIP-----------------FEHDEEIIRGQVFFR 224
Query: 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKEI 956
++++ + ++ CL+ P+ RPT + +++++
Sbjct: 225 QRVSSECQHLIRW-------CLALRPSDRPTFEEIQNHPWMQDV 261
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (387), Expect = 5e-42
Identities = 60/286 (20%), Positives = 109/286 (38%), Gaps = 36/286 (12%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHR------EFTAEMETLGKVKHQNLVP 739
+G G F V K G A K + + +T+ R + E+ L +++H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 740 LLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF 799
L + +L+ E + G L +L + L ++ + G+ +LH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 131
Query: 800 TPHIIHRDIKASNILLNEE----FEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG 855
I H D+K NI+L + K+ DFGLA I + +I GT ++ PE
Sbjct: 132 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEFVAPEIV 188
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915
D++S GVI L++G P G + + +
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASP-------FLGDTKQETLANVSAVNYEFEDEYFS 241
Query: 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKEIKVE 959
+A +K + ++L +P R T+ L+ ++K +
Sbjct: 242 NTSALAKDFIRRLLVK-------DPKKRMTIQDSLQHPWIKPKDTQ 280
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 153 bits (386), Expect = 7e-42
Identities = 43/290 (14%), Positives = 91/290 (31%), Gaps = 30/290 (10%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNL 737
++ IG+G FG +++ L + + VA+K + + E T +
Sbjct: 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEP--RRSDAPQLRDEYRTYKLLAGCTG 62
Query: 738 VPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH 797
+P + Y + ++ ++ SL+ L A + +H
Sbjct: 63 IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFS---VKTVAMAAKQMLARVQSIHE 119
Query: 798 GFTPHIIHRDIKASNILLNEEFE-----AKVADFGLARLISACETHV------STDIAGT 846
+++RDIK N L+ V DFG+ + T +++GT
Sbjct: 120 ---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT 176
Query: 847 FGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906
Y+ + R D+ + G + + + G P +G + + G
Sbjct: 177 ARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW-------QGLKAATNKQKYERIG 229
Query: 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956
+ L A K + + P ++ ++
Sbjct: 230 EKKQSTPLRELCAGFPEEFYKYMH---YARNLAFDATPDYDYLQGLFSKV 276
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (390), Expect = 8e-42
Identities = 77/307 (25%), Positives = 124/307 (40%), Gaps = 46/307 (14%)
Query: 680 NFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLV 738
++ T +IG+G FG VY+A L D G+ VA+KK+ Q K R E++ + K+ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIV 76
Query: 739 PLLGYCSFDEEK------LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGL 792
L + EK LV +Y+ + R+ + + + L R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 793 AFLHHGFTPHIIHRDIKASNILLNEE-FEAKVADFGLARLISACETHVSTDIAGTFGYIP 851
A++H I HRDIK N+LL+ + K+ DFG A+ + E +VS I + P
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAP 191
Query: 852 PEYGQSGRSTTRGDVYSFGVILLELVTGKEP-------------------TGPEFKDIEG 892
+ T+ DV+S G +L EL+ G+ E
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 893 GNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK- 951
N + F ++K V P ++ + ++L P R T L
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPR-TPPEAIALCSRLLEY-------TPTARLTPLEACAH 303
Query: 952 -FLKEIK 957
F E++
Sbjct: 304 SFFDELR 310
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 152 bits (385), Expect = 1e-41
Identities = 72/298 (24%), Positives = 113/298 (37%), Gaps = 43/298 (14%)
Query: 685 NIIGDGGFGTVYKA-ALPDGKTVAVKKL-----SQAKTQGHREFTAEMETLGKVKHQNLV 738
+ +G+G F TVYKA + VA+KK+ S+AK +R E++ L ++ H N++
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63
Query: 739 PLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG 798
LL LV+++M + N L +GL +LH
Sbjct: 64 GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLV----LTPSHIKAYMLMTLQGLEYLHQ- 118
Query: 799 FTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG 858
I+HRD+K +N+LL+E K+ADFGLA+ + T T Y PE
Sbjct: 119 --HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS-PNRAYTHQVVTRWYRAPELLFGA 175
Query: 859 RS-TTRGDVYSFGVILLELVTGKEP------------------TGPEFKDIEGGNLVGWV 899
R D+++ G IL EL+ T E + + +L +V
Sbjct: 176 RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV 235
Query: 900 FQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKE 955
K G + D ++ + NP R T LK +
Sbjct: 236 TFKSFPGIPLHHIFSAA-GDDLLDLIQGLFLF-------NPCARITATQALKMKYFSN 285
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 151 bits (381), Expect = 4e-41
Identities = 63/301 (20%), Positives = 111/301 (36%), Gaps = 38/301 (12%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKL--SQAKTQGHREFTAEMETLGKVKHQ 735
+ K IG+G +GTV+KA + VA+K++ E+ L ++KH+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 736 NLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFL 795
N+V L D++ LV+E+ + G + + L L
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-------GDLDPEIVKSFLFQLLKGL 114
Query: 796 HHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG 855
+ +++HRD+K N+L+N E K+A+FGLAR S ++ + P
Sbjct: 115 GFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLF 174
Query: 856 QSGRSTTRGDVYSFGVILLELVTGKEP-------------------TGPEFKDIEGGNLV 896
+ +T D++S G I EL P T E + L
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234
Query: 897 GWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLK 954
+ M + V L A + ++ +L+ NP R + L+ +
Sbjct: 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKC-------NPVQRISAEEALQHPYFS 287
Query: 955 E 955
+
Sbjct: 288 D 288
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (378), Expect = 3e-40
Identities = 52/281 (18%), Positives = 110/281 (39%), Gaps = 33/281 (11%)
Query: 686 IIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC 744
++G G G V + + A+K L + RE + ++V ++
Sbjct: 19 VLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREVELHWRAS---QCPHIVRIVDVY 74
Query: 745 ----SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT 800
+ + L+V E + G L +++R + + +I + +LH
Sbjct: 75 ENLYAGRKCLLIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHS--- 129
Query: 801 PHIIHRDIKASNILLNEEFE---AKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQS 857
+I HRD+K N+L + K+ DFG A+ ++ + + T Y+ PE
Sbjct: 130 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGP 187
Query: 858 GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA-DVLDPTV 916
+ D++S GVI+ L+ G P F G + + +++ GQ + +
Sbjct: 188 EKYDKSCDMWSLGVIMYILLCGYPP----FYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 243
Query: 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKE 955
++ + K ++ +L+ P R T+ + ++ +
Sbjct: 244 VSEEVKMLIRNLLKT-------EPTQRMTITEFMNHPWIMQ 277
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (371), Expect = 1e-39
Identities = 72/315 (22%), Positives = 120/315 (38%), Gaps = 52/315 (16%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKL--SQAKTQGHREFTAEMETLGKVKHQ 735
+ + K IG G FG V+KA G+ VA+KK+ K E++ L +KH+
Sbjct: 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69
Query: 736 NLVPLLGYCSFDEEK--------LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACG 787
N+V L+ C LV+++ + L + ++
Sbjct: 70 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQM 125
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET---HVSTDIA 844
GL ++H I+HRD+KA+N+L+ + K+ADFGLAR S + + T+
Sbjct: 126 LLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRV 182
Query: 845 GTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEP--------------------T 883
T Y PPE R D++ G I+ E+ T T
Sbjct: 183 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 242
Query: 884 GPEFKDIEGGNLVGWV-FQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAM 942
+ +++ L + K +K + D L V + ++ K+L + +PA
Sbjct: 243 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVL-------DPAQ 295
Query: 943 RPTMLHVLK--FLKE 955
R L F
Sbjct: 296 RIDSDDALNHDFFWS 310
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (363), Expect = 3e-38
Identities = 55/273 (20%), Positives = 102/273 (37%), Gaps = 32/273 (11%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHRE---FTAEMETLGKVKH 734
N+F ++G G FG V G+ A+K L + E E L +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 735 QNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAF 794
L L + V EY G L L E + A ++
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE-------ERARFYGAEIVSA 117
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY 854
L + + +++RDIK N++L+++ K+ DFGL + + GT Y+ PE
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-MKTFCGTPEYLAPEV 176
Query: 855 GQSGRSTTRGDVYSFGVILLELVTGKEP-TGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913
+ D + GV++ E++ G+ P + + + F+ + ++
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---------FELILME---EIRF 224
Query: 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM 946
P L+ ++K ++ +L+ +P R
Sbjct: 225 PRTLSPEAKSLLAGLLKK-------DPKQRLGG 250
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 142 bits (358), Expect = 7e-38
Identities = 75/290 (25%), Positives = 117/290 (40%), Gaps = 34/290 (11%)
Query: 679 NNFCKTNIIGDGGFGTVYKA----ALPDGKTVAVKKLSQA----KTQGHREFTAEMETLG 730
NF ++G G +G V+ GK A+K L +A K + E + L
Sbjct: 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83
Query: 731 KVKHQNLVPLLGYCSFDEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA 789
++ + L Y E KL L+ +Y+ G L L R E +I
Sbjct: 84 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA-- 141
Query: 790 RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGY 849
L H II+RDIK NILL+ + DFGL++ A ET + D GT Y
Sbjct: 142 -----LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEY 196
Query: 850 IPPEYGQSGRS--TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907
+ P+ + G S D +S GV++ EL+TG P F N + +++ K
Sbjct: 197 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP----FTVDGEKNSQAEISRRILKS- 251
Query: 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957
+ P ++A +K ++ ++L +P R + EIK
Sbjct: 252 --EPPYPQEMSALAKDLIQRLLMK-------DPKKRLGCGP--RDADEIK 290
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (354), Expect = 4e-37
Identities = 70/305 (22%), Positives = 123/305 (40%), Gaps = 36/305 (11%)
Query: 676 EATNNFCKTNIIGDGGFGTVYKAA-LPDGKTVAVKKLSQ--AKTQGHREFTAEMETLGKV 732
E + +G G +G V A G VA+KKL + + E+ L +
Sbjct: 15 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM 74
Query: 733 KHQNLVPLLGYCSFDE------EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIAC 786
+H+N++ LL + DE + LV +M L + LG D+ +
Sbjct: 75 RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK------LGEDRIQFLVY 128
Query: 787 GAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGT 846
+GL ++H IIHRD+K N+ +NE+ E K+ DFGLAR ++ ++ +
Sbjct: 129 QMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQA---DSEMTGYVVTR 182
Query: 847 FGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP-TGPEFKDIE------GGNLVGWV 899
+ P R T D++S G I+ E++TGK G + D G
Sbjct: 183 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 242
Query: 900 FQKMKKGQAADVLD--PTVLTADSKPMMLKMLRIAGD----CLSDNPAMRPTMLHVLK-- 951
Q+++ +A + + P + D ++ +A + L + R T L
Sbjct: 243 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 302
Query: 952 FLKEI 956
+ + +
Sbjct: 303 YFESL 307
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 134 bits (337), Expect = 9e-35
Identities = 55/284 (19%), Positives = 101/284 (35%), Gaps = 30/284 (10%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHRE---FTAEMETLGKVKH 734
+ F + +G G FG V G A+K L + K ++ E L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 735 QNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAF 794
LV L + +V EY+ G + LR A +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFEY 156
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEY 854
LH +I+RD+K N+L++++ +V DFG A+ + + GT + PE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC----GTPEALAPEI 209
Query: 855 GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914
S D ++ GV++ E+ G P F + + + V P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP----FFADQPIQIYEKIVSG-------KVRFP 258
Query: 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK--FLKEI 956
+ ++D K ++ +L++ D ++ + + +
Sbjct: 259 SHFSSDLKDLLRNLLQV--DLTKRFGNLKNGVNDIKNHKWFATT 300
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 129 bits (324), Expect = 3e-33
Identities = 47/306 (15%), Positives = 107/306 (34%), Gaps = 43/306 (14%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQN 736
+++ +G G + V++A + + + V VK L K ++ E++ L ++ N
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPN 91
Query: 737 LVPLLGYCSFDEEKL--LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAF 794
++ L + LV+E++ N + L + L +
Sbjct: 92 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDY 144
Query: 795 LHHGFTPHIIHRDIKASNILLNEEF-EAKVADFGLARLISACETHVSTDIAGTFGYIPPE 853
H I+HRD+K N++++ E + ++ D+GLA + + + + PE
Sbjct: 145 CHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY--NVRVASRYFKGPE 199
Query: 854 YGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWV------------- 899
+ D++S G +L ++ KEP + + + V
Sbjct: 200 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 259
Query: 900 -------FQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK- 951
F + + + V + + + + L L + R T ++
Sbjct: 260 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319
Query: 952 -FLKEI 956
+ +
Sbjct: 320 PYFYTV 325
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (320), Expect = 2e-32
Identities = 70/312 (22%), Positives = 109/312 (34%), Gaps = 47/312 (15%)
Query: 679 NNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQ 735
+ IG G G V A + VA+KKLS+ + E+ + V H+
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 736 NLVPLLGYCSFD------EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA 789
N++ LL + ++ LV E M + ++ +
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-------HERMSYLLYQML 129
Query: 790 RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGY 849
G+ LH IIHRD+K SNI++ + K+ DFGLAR +A + + T T Y
Sbjct: 130 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 184
Query: 850 IPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP-------------------TGPEFKDI 890
PE D++S G I+ E+V K PEF
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244
Query: 891 EGGNLVGWVFQKMK-KGQAADVLDPTVLTADSKPMMLKMLRIAGD----CLSDNPAMRPT 945
+ +V + K G L P L A D L +PA R +
Sbjct: 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 304
Query: 946 MLHVLK--FLKE 955
+ L+ ++
Sbjct: 305 VDDALQHPYINV 316
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (318), Expect = 3e-32
Identities = 66/310 (21%), Positives = 116/310 (37%), Gaps = 48/310 (15%)
Query: 676 EATNNFCKTNIIGDGGFGTVYKA-ALPDGKTVAVKKLSQA--KTQGHREFTAEMETLGKV 732
E + + +G G +G+V A G VAVKKLS+ + E+ L +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 733 KHQNLVPLLGYCS-----FDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACG 787
KH+N++ LL + + + + +++ L+ ++ + L D +
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQ 129
Query: 788 AARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF 847
RGL ++H IIHRD+K SN+ +NE+ E K+ DFGLAR T +A +
Sbjct: 130 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYVATRW 183
Query: 848 GYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK--------------------EPTGPEF 887
P D++S G I+ EL+TG+ P
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243
Query: 888 KDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTML 947
K I + ++ + + + ++ KML + + R T
Sbjct: 244 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVL-------DSDKRITAA 296
Query: 948 HVLK--FLKE 955
L + +
Sbjct: 297 QALAHAYFAQ 306
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 113 bits (284), Expect = 1e-27
Identities = 72/387 (18%), Positives = 148/387 (38%), Gaps = 24/387 (6%)
Query: 183 NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGN 242
A + VL + + + +L ++ L + I + +LT ++ N
Sbjct: 20 ALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSN 75
Query: 243 NNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSY 302
N L+ + P + +L +L +++++N ++ P + + + + +L+
Sbjct: 76 NQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTN 133
Query: 303 NRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFG 362
+ + L + G L L NLTTL+
Sbjct: 134 LNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVL 193
Query: 363 DSIKLQG-LYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLS 421
+ L NNQ++ P + + L +L+L GN+L + +L LT LDL+
Sbjct: 194 AKLTNLESLIATNNQISDITPLGILT--NLDELSLNGNQLKD--IGTLASLTNLTDLDLA 249
Query: 422 FNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPR 481
N++ P LS + L L L N++S + N ++
Sbjct: 250 NNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPI---- 303
Query: 482 SLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLS 541
NL LT L L+ N + P + +L +L+ L + N++ ++ +L+N+ +LS
Sbjct: 304 --SNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLS 357
Query: 542 LAENRLEGMVPRSGICQNLSKISLTGN 568
N++ + P + ++++ L
Sbjct: 358 AGHNQISDLTPLAN-LTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 100 bits (249), Expect = 4e-23
Identities = 75/397 (18%), Positives = 133/397 (33%), Gaps = 44/397 (11%)
Query: 27 KNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPREL 86
K ++ ++ + +Q+ +L I I + + L I+ SNN L+ P L
Sbjct: 31 KTNVTDTVS--QTDLDQVTTLQADRLG-IKSIDG-VEYLNNLTQINFSNNQLTDITP--L 84
Query: 87 CTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDS 146
L +I ++ N + L + + + L +
Sbjct: 85 KNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI 144
Query: 147 NNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIG 206
++ + + ++ + L E + + K +
Sbjct: 145 SDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLD----------ISSNKVSDISVLA 194
Query: 207 NLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSH 266
L+ L L +N I P + +L L L N L +A L L L L++
Sbjct: 195 KLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 250
Query: 267 NNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNN 326
N +S P LS + L N++S P + + ++L N
Sbjct: 251 NQISNLAP--------------LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQ 296
Query: 327 NMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLG 386
I L NLT L L N ++ P KLQ L+ NN+++ SL
Sbjct: 297 LEDISPIS----NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLA 348
Query: 387 SLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN 423
+L + L+ N++S P NL +T L L+
Sbjct: 349 NLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 88.5 bits (218), Expect = 4e-19
Identities = 82/391 (20%), Positives = 131/391 (33%), Gaps = 62/391 (15%)
Query: 90 ESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIP--EYLSKLPLMVLDLDSN 147
+ L +T T+ ++ L R I SI EYL+ L ++ +N
Sbjct: 22 AEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK-SIDGVEYLNNL--TQINFSNN 76
Query: 148 NFTGIIPVS-------IWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGH 200
T I P+ I + + L + N + L N
Sbjct: 77 QLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNR 136
Query: 201 LPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTL----DLGNNNLSGLIPEKIADL 256
L +S +S L ++L ++ D L L L ++ +A L
Sbjct: 137 LELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKL 196
Query: 257 AQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSC 316
L+ L+ ++N +S P + L+ N+L L S
Sbjct: 197 TNLESLIATNNQISDITPLGILTNLD--------------ELSLNGNQLKD--IGTLASL 240
Query: 317 VVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK---------- 366
+ DL L NN +S P LS LT LT L L NQ++ P ++
Sbjct: 241 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLE 298
Query: 367 ----------LQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELT 416
L L L N ++ P + SL L +L NK+S +S NL +
Sbjct: 299 DISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNIN 354
Query: 417 HLDLSFNELDGQLPSSLSNILNLVGLYLQHN 447
L N++ P L+N+ + L L
Sbjct: 355 WLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 112 bits (279), Expect = 3e-27
Identities = 47/215 (21%), Positives = 81/215 (37%), Gaps = 18/215 (8%)
Query: 687 IGDGGFGTVYKA-ALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS 745
+G G F TV+ A + + VA+K + K E++ L +V + +
Sbjct: 21 LGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY-TEAAEDEIKLLQRVNDADNTKEDSMGA 79
Query: 746 FDEEKLL-VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYK-----------IACGAARGLA 793
KLL + + + + + +L K+Y+ I+ GL
Sbjct: 80 NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLD 139
Query: 794 FLHHGFTPHIIHRDIKASNILLNEE-FEAKVADFGLARLISACETHVS-TDIAGTFGYIP 851
++H IIH DIK N+L+ + +A L +AC T+ T Y
Sbjct: 140 YMHRR--CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRS 197
Query: 852 PEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 886
PE D++S ++ EL+TG P+
Sbjct: 198 PEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 232
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 98.6 bits (244), Expect = 5e-23
Identities = 63/304 (20%), Positives = 112/304 (36%), Gaps = 26/304 (8%)
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIP 358
S L +P++L ++DL NN ++ G L NL TL L N+++ P
Sbjct: 16 QCSDLGLEK-VPKDLPPDTALLDL--QNNKITEIKDGDFKNLKNLHTLILINNKISKISP 72
Query: 359 SEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHL 418
F +KL+ LYL NQL +L L N+++ + F L ++ +
Sbjct: 73 GAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHE---NEITKVRKSVFNGLNQMIVV 129
Query: 419 DLSFNELD--GQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFD 476
+L N L G + + L + + ++ L + + +++ N
Sbjct: 130 ELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPS-----LTELHLDGNKIT 184
Query: 477 GGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSN 536
SL L+ L L L N + L N L L ++ N+L ++P +
Sbjct: 185 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKY 243
Query: 537 LLYLSLAENRLEGMVPRS-------GICQNLSKISLTGNKDLCGKIIGSNCQVKTFGKLA 589
+ + L N + + + S +SL N +I Q TF +
Sbjct: 244 IQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEI-----QPSTFRCVY 298
Query: 590 LLHA 593
+ A
Sbjct: 299 VRAA 302
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 95.1 bits (235), Expect = 7e-22
Identities = 57/267 (21%), Positives = 101/267 (37%), Gaps = 9/267 (3%)
Query: 332 KIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGL 391
K+P L + LDL N++T +F + L L L NN+++ P + L L
Sbjct: 24 KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 81
Query: 392 VKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSG 451
+L L+ N+L L+EL + ++ + + L+ ++ + L K SG
Sbjct: 82 ERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVE-LGTNPLKSSG 140
Query: 452 PVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLM 511
+ F K++ + +++ +P+ L LT L L NK T L L
Sbjct: 141 IENGAFQGM--KKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLN 195
Query: 512 QLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDL 571
L L +S N + ++ + +L L L N+L + + + + L N +
Sbjct: 196 NLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNN-I 254
Query: 572 CGKIIGSNCQVKTFGKLALLHAFGLAG 598
C K A L
Sbjct: 255 SAIGSNDFCPPGYNTKKASYSGVSLFS 281
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 94.7 bits (234), Expect = 1e-21
Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 13/258 (5%)
Query: 297 VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGP 356
+ DL N+++ + + + L+L NN +S PG+ + L L L LS+NQL
Sbjct: 35 LLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKEL 94
Query: 357 IPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELT 416
+L+ ++ S+ L + +V+L K SG +F +K+L+
Sbjct: 95 PEKMPKTLQELRVHENEITKVRKSVFNGL-NQMIVVELGTNPLKSSGIENGAFQGMKKLS 153
Query: 417 HLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFD 476
++ ++ + +L L+L NK++ +A + +S N
Sbjct: 154 YIRIADTNITTIPQGLPP---SLTELHLDGNKITKVDAASLKGL--NNLAKLGLSFNSIS 208
Query: 477 GGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCS--- 533
SL N +L L L+ NK ++P L + ++ + + N + C
Sbjct: 209 AVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGY 267
Query: 534 ---LSNLLYLSLAENRLE 548
++ +SL N ++
Sbjct: 268 NTKKASYSGVSLFSNPVQ 285
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 92.0 bits (227), Expect = 9e-21
Identities = 58/286 (20%), Positives = 100/286 (34%), Gaps = 13/286 (4%)
Query: 33 SLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESL 92
+P L L L +N+ + N L ++ L NN +S P L
Sbjct: 24 KVPKDLPP--DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 81
Query: 93 EEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGI 152
E + L N L E + + L + S+ L+++ ++ L + +GI
Sbjct: 82 ERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGI 141
Query: 153 IPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALS 212
+ + L A+ + ++P G +L L L N + + L+ L+
Sbjct: 142 ENGAFQGMKKLSYIRIADTNIT-TIP--QGLPPSLTELHLDGNKITKVDAASLKGLNNLA 198
Query: 213 VLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGP 272
L L+ N + L + L L L NN L +P +AD +Q + L +NN+S
Sbjct: 199 KLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNISAI 257
Query: 273 IPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLS-GPIPEELGSCV 317
+ S + L N + I CV
Sbjct: 258 GSNDFCPPGYNTKKASYSGV------SLFSNPVQYWEIQPSTFRCV 297
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 76.6 bits (187), Expect = 1e-15
Identities = 52/254 (20%), Positives = 95/254 (37%), Gaps = 15/254 (5%)
Query: 2 LSFNALSGSLPEELSDLPILTF-AAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
L N ++ + +L L N++S P ++E L LS NQ + ++P
Sbjct: 38 LQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ-LKELPE 96
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDG--NLLTGTIEGVFEKCSNLSQ 118
++ L+ + + N ++ + ++L +G G F+ LS
Sbjct: 97 KM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSY 154
Query: 119 LVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLP 178
+ I +I +IP+ L L L LD N T + S+ L + + N +
Sbjct: 155 IRIADTNI-TTIPQGLPPS-LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDN 212
Query: 179 YEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGI------IPYELGDC 232
+ N L L L NN L P + + + V+ L++N I P
Sbjct: 213 GSLANTPHLRELHLNNNKLVKV-PGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKK 271
Query: 233 ISLTTLDLGNNNLS 246
S + + L +N +
Sbjct: 272 ASYSGVSLFSNPVQ 285
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 92.5 bits (229), Expect = 5e-22
Identities = 25/159 (15%), Positives = 48/159 (30%), Gaps = 21/159 (13%)
Query: 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKT----------QGHREFTAEMETLGKVKH 734
++G+G V+ VK T G F+ + +
Sbjct: 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65
Query: 735 QNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAF 794
+ L L G + Y G+ L L + + ++ +A
Sbjct: 66 RALQKLQGLA-------VPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAK 118
Query: 795 LHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833
+H I+H D+ N+L+ E + DF + +
Sbjct: 119 FYH---RGIVHGDLSQYNVLV-SEEGIWIIDFPQSVEVG 153
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 94.0 bits (232), Expect = 2e-21
Identities = 69/265 (26%), Positives = 110/265 (41%), Gaps = 24/265 (9%)
Query: 338 SRLTNLTTLDLSRNQLTG--PIPSEFGDSIKLQGLYL-GNNQLTGSIPWSLGSLGGLVKL 394
++ + LDLS L PIPS + L LY+ G N L G IP ++ L L L
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 395 NLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVD 454
+T +SG +P +K L LD S+N L G LP S+S++ NLVG+ N++SG +
Sbjct: 107 YITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Query: 455 ELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQL- 513
+ + + + + N L P +L + + + Q
Sbjct: 167 DSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKI 226
Query: 514 --------------------EYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPR 553
LD+ NR+ G +P+ + L L L+++ N L G +P+
Sbjct: 227 HLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
Query: 554 SGICQNLSKISLTGNKDLCGKIIGS 578
G Q + NK LCG + +
Sbjct: 287 GGNLQRFDVSAYANNKCLCGSPLPA 311
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 82.1 bits (201), Expect = 2e-17
Identities = 73/322 (22%), Positives = 121/322 (37%), Gaps = 43/322 (13%)
Query: 215 DLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGL--IPEKIADLAQLQCLVLSHNNLSGP 272
D + + G++ + LDL NL IP +A+L L L + N
Sbjct: 32 DCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGIN---- 87
Query: 273 IPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGK 332
P ++ + +++ +SG IP+ L +V L + N LSG
Sbjct: 88 -------NLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGT 140
Query: 333 IPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLV 392
+P S+S L NL + N+++G IP +G KL +
Sbjct: 141 LPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISR----------------- 183
Query: 393 KLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGP 452
N+L+GK+P +F NL S+ H +
Sbjct: 184 ------NRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNT----QKIHLAKNSL 233
Query: 453 VDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQ 512
+L + + +++ NN G LP+ L L +L +L++ N GEIP GNL +
Sbjct: 234 AFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQR 292
Query: 513 LEYLDVSRNR-LCGQIPETMCS 533
+ + N+ LCG P C+
Sbjct: 293 FDVSAYANNKCLCG-SPLPACT 313
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 74.8 bits (182), Expect = 5e-15
Identities = 60/282 (21%), Positives = 99/282 (35%), Gaps = 22/282 (7%)
Query: 36 SWLGNWNQMESLLLSSNQFIGK--IPPEIGNCSMLKSISLSNN-FLSGSIPRELCTSESL 92
++ +L LS IP + N L + + L G IP + L
Sbjct: 44 DTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQL 103
Query: 93 EEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVL-DLDSNNFTG 151
+ + ++G I + L L N + G++P +S LP +V D N +G
Sbjct: 104 HYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISG 163
Query: 152 IIPVSIWNSETLME-FSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSA 210
IP S + L + + N L G +P N V + + +
Sbjct: 164 AIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN--LAFVDLSRNMLEGDASVLFGSDK 221
Query: 211 LSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270
+ + ++G +L LDL NN + G +P+ + L L L +S NNL
Sbjct: 222 NTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLC 281
Query: 271 GPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRL--SGPIP 310
G IP +Q V + N+ P+P
Sbjct: 282 GEIPQ-------------GGNLQRFDVSAYANNKCLCGSPLP 310
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 74.0 bits (180), Expect = 9e-15
Identities = 68/317 (21%), Positives = 110/317 (34%), Gaps = 42/317 (13%)
Query: 62 IGNCSMLKSISLSNNFLSGSIPRELCTSES----LEEIDLDGNLLTGTIEGVFEKCSNLS 117
+GN + L S + + + + LC +++ + +DL G L
Sbjct: 18 LGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYP---------- 67
Query: 118 QLVIFRNHIYGSIPEYLSKLP-LMVLDLDSN-NFTGIIPVSIWNSETLMEFSAANNLLEG 175
IP L+ LP L L + N G IP +I L + + G
Sbjct: 68 ------------IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSG 115
Query: 176 SLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISL 235
++P + L L + N L G LP I +L L + + N G IP G L
Sbjct: 116 AIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL 175
Query: 236 TTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIP-----------SKPSSYFRQA 284
T + N L + LS N L G +
Sbjct: 176 FTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235
Query: 285 NMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLT 344
++ + ++ DL NR+ G +P+ L + L ++ N L G+IP L
Sbjct: 236 DLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFD 294
Query: 345 TLDLSRNQ-LTG-PIPS 359
+ N+ L G P+P+
Sbjct: 295 VSAYANNKCLCGSPLPA 311
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 45.9 bits (107), Expect = 1e-05
Identities = 24/155 (15%), Positives = 49/155 (31%), Gaps = 2/155 (1%)
Query: 1 MLSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
N +SG++P+ L + ++ + N + + S +
Sbjct: 155 TFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDAS 214
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
+ ++ S++L +DL N + GT+ + L L
Sbjct: 215 VLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLN 274
Query: 121 IFRNHIYGSIPEYLSKLP-LMVLDLDSNNFTGIIP 154
+ N++ G IP+ L V +N P
Sbjct: 275 VSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGSP 308
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.1 bits (206), Expect = 3e-18
Identities = 52/292 (17%), Positives = 84/292 (28%), Gaps = 41/292 (14%)
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293
+ + L N +S + L L L N L+
Sbjct: 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARID-----------AAAFTGLAL 81
Query: 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQL 353
+ +L P + L L+ L PG L L L L N L
Sbjct: 82 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNAL 141
Query: 354 TGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLK 413
F D L L+L N+++ + L L +L L N+++ P +F +L
Sbjct: 142 QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 201
Query: 414 ELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNN 473
L L L N L +L+ + L L L N
Sbjct: 202 RLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD--------------------- 240
Query: 474 LFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCG 525
R+ ++L ++ +P L + ++ N L G
Sbjct: 241 ------CRARPLWAWLQKFRGSSSEVPCSLPQRLAG---RDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.2 bits (196), Expect = 5e-17
Identities = 56/241 (23%), Positives = 88/241 (36%), Gaps = 5/241 (2%)
Query: 333 IPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLV 392
+P + + L N+++ + F L L+L +N L + L L
Sbjct: 26 VPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 83
Query: 393 KLNLTGNKLSGKV-PTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSG 451
+L+L+ N V P +F L L L L L P + L LYLQ N L
Sbjct: 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA 143
Query: 452 PVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLM 511
D+ F + + + + N R+ L L L LH+N+ P +L
Sbjct: 144 LPDDTFRDL--GNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 201
Query: 512 QLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDL 571
+L L + N L E + L L YL L +N + L K + ++
Sbjct: 202 RLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVP 261
Query: 572 C 572
C
Sbjct: 262 C 262
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.4 bits (186), Expect = 1e-15
Identities = 65/293 (22%), Positives = 97/293 (33%), Gaps = 20/293 (6%)
Query: 41 WNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGN 100
+N+ + Q + +P I + I L N +S +L + L N
Sbjct: 9 YNEPKVTTSCPQQGLQAVPVGIPAA--SQRIFLHGNRISHVPAASFRACRNLTILWLHSN 66
Query: 101 LLTGTIEGVFEKCSNLSQLVIFRNHIYGSI-PEYLSKLP-LMVLDLDSNNFTGIIPVSIW 158
+L F + L QL + N S+ P L L L LD + P
Sbjct: 67 VLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFR 126
Query: 159 NSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNS 218
L +N L+ + L L L N + + L +L L L+
Sbjct: 127 GLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQ 186
Query: 219 NLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPS 278
N + P+ D L TL L NNLS L E +A L LQ L L+ N ++P
Sbjct: 187 NRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARP- 245
Query: 279 SYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSG 331
F S + + +P+ L + L N L G
Sbjct: 246 ------------LWAWLQKFRGSSSEVPCSLPQRLAGRDL---KRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.8 bits (169), Expect = 2e-13
Identities = 50/277 (18%), Positives = 85/277 (30%), Gaps = 20/277 (7%)
Query: 33 SLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESL 92
++P + + + L N+ C L + L +N L+ L
Sbjct: 25 AVPVGIPA--ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 93 EEIDLDGNLLTGTI-EGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLP-LMVLDLDSNNFT 150
E++DL N ++ F L L + R + P L L L L N
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 142
Query: 151 GIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSA 210
+ + + L N + +L+RL+L N + P +L
Sbjct: 143 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR 202
Query: 211 LSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270
L L L +N + L +L L L +N A LQ S + +
Sbjct: 203 LMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVP 261
Query: 271 GPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSG 307
+P + + + L+ N L G
Sbjct: 262 CSLPQR---------------LAGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.5 bits (137), Expect = 2e-09
Identities = 31/152 (20%), Positives = 54/152 (35%), Gaps = 4/152 (2%)
Query: 1 MLSFNALSGSLPEELSDLPIL-TFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIP 59
L NAL + DL L N++S + ++ LLL N+ P
Sbjct: 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP 194
Query: 60 PEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQL 119
+ L ++ L N LS L +L+ + L+ N + L +
Sbjct: 195 HAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR-ARPLWAWLQKF 253
Query: 120 VIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTG 151
+ + S+P+ L+ L L +N+ G
Sbjct: 254 RGSSSEVPCSLPQRLAGRDL--KRLAANDLQG 283
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.2 bits (165), Expect = 5e-13
Identities = 45/207 (21%), Positives = 66/207 (31%), Gaps = 13/207 (6%)
Query: 204 EIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLV 263
E+ +++ ++ + + P +L T L L N L + +L L
Sbjct: 5 EVSKVASHLEVNCDKRNLTAL-PPDLPK--DTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 264 LSHNN---------LSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELG 314
L L S Q+ + V D+S+NRL+ L
Sbjct: 62 LDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALR 121
Query: 315 SCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGN 374
+ +L L N L PG L+ L L L+ N LT L L L
Sbjct: 122 GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQE 181
Query: 375 NQLTGSIPWSLGSLGGLVKLNLTGNKL 401
N L +IP L L GN
Sbjct: 182 NSLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.4 bits (155), Expect = 9e-12
Identities = 46/213 (21%), Positives = 65/213 (30%), Gaps = 8/213 (3%)
Query: 360 EFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLD 419
E + LT ++P L L+L+ N L + LT L+
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLPKD--TTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 420 LSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGL 479
L EL L L + + +++S N
Sbjct: 62 LDRAELTKL-----QVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLP 116
Query: 480 PRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLY 539
+L L L L L N+ P L +LE L ++ N L + L NL
Sbjct: 117 LGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDT 176
Query: 540 LSLAENRLEGMVPRSGICQNLSKISLTGNKDLC 572
L L EN L + L L GN LC
Sbjct: 177 LLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLC 209
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.0 bits (154), Expect = 1e-11
Identities = 42/209 (20%), Positives = 72/209 (34%), Gaps = 6/209 (2%)
Query: 61 EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120
E+ + ++ L+ ++P +L + + L NLL + L+QL
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 121 IFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180
+ + + + LP++ S+N +P+ L + N L
Sbjct: 62 L--DRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGA 119
Query: 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDL 240
+ L+ L L N LK P + L L L +N + L +L TL L
Sbjct: 120 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLL 179
Query: 241 GNNNLSGLIPEKIADLAQLQCLVLSHNNL 269
N+L IP+ L L N
Sbjct: 180 QENSLYT-IPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.7 bits (148), Expect = 7e-11
Identities = 47/265 (17%), Positives = 79/265 (29%), Gaps = 25/265 (9%)
Query: 324 LNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPW 383
+ L+ +P L + T L LS N L + +L L L +LT
Sbjct: 17 CDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD 73
Query: 384 SLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLY 443
+ G + L+ + + + L L L L + L
Sbjct: 74 GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKG 133
Query: 444 LQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEI 503
+ L + K+ ++++NN L L L L L EN I
Sbjct: 134 NELKTLPPGLLTPT-----PKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TI 187
Query: 504 PPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLS--LAENRLEGMVPRSGICQNLS 561
P L + + N +C+ +LY L +N V + G+
Sbjct: 188 PKGFFGSHLLPFAFLHGNPW-------LCN-CEILYFRRWLQDNAENVYVWKQGVDVKAM 239
Query: 562 KISLT------GNKDLCGKIIGSNC 580
++ +K K G C
Sbjct: 240 TSNVASVQCDNSDKFPVYKYPGKGC 264
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.7 bits (117), Expect = 6e-07
Identities = 38/190 (20%), Positives = 57/190 (30%), Gaps = 5/190 (2%)
Query: 33 SLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESL 92
+LP L L LS N + + L ++L L+ L
Sbjct: 24 ALPPDLPK--DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLP--VL 79
Query: 93 EEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGI 152
+DL N L + V F + L L L N +
Sbjct: 80 GTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTL 139
Query: 153 IPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALS 212
P + + L + S ANN L + L+ L+L N L +PK L
Sbjct: 140 PPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLP 198
Query: 213 VLDLNSNLFD 222
L+ N +
Sbjct: 199 FAFLHGNPWL 208
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.1 bits (162), Expect = 1e-12
Identities = 43/248 (17%), Positives = 78/248 (31%), Gaps = 11/248 (4%)
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTG-PI 357
DL+ L + L S V+ + + + S + +DLS + + +
Sbjct: 6 DLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLAEHFS-PFRVQHMDLSNSVIEVSTL 63
Query: 358 PSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTH 417
KLQ L L +L+ I +L LV+LNL+G +
Sbjct: 64 HGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 123
Query: 418 LDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSG-------PVDELFSNSAAWKIATMNM 470
+L+ + + + V + LSG +
Sbjct: 124 DELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLS 183
Query: 471 SNNLFDGGLPRSLGNLSYLTNLDL-HENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPE 529
+ + + L+YL +L L E +LG + L+ L V G +
Sbjct: 184 DSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQL 243
Query: 530 TMCSLSNL 537
+L +L
Sbjct: 244 LKEALPHL 251
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.3 bits (129), Expect = 2e-08
Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 7/125 (5%)
Query: 416 THLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNN-L 474
LDL+ L + L + ++ + + P+ E FS ++ M++SN+ +
Sbjct: 3 QTLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLAEHFSPF---RVQHMDLSNSVI 58
Query: 475 FDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVS--RNRLCGQIPETMC 532
L L S L NL L + + I L L L++S + +
Sbjct: 59 EVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLS 118
Query: 533 SLSNL 537
S S L
Sbjct: 119 SCSRL 123
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.8 bits (125), Expect = 7e-08
Identities = 45/281 (16%), Positives = 82/281 (29%), Gaps = 11/281 (3%)
Query: 189 RLVLTNNMLKGHLPKEIGNLSALSVLDLN-SNLFDGIIPYELGDCISLTTLDLGNNNLSG 247
L LT L P G L + V+ F E + +DL N+ +
Sbjct: 4 TLDLTGKNL---HPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEV 60
Query: 248 -LIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLS 306
+ ++ ++LQ L L LS PI + + +N+ L+ G + + +
Sbjct: 61 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKN---SNLVRLNLSGCSGFSEFAL-QTL 116
Query: 307 GPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK 366
L + + + +T L +N + +
Sbjct: 117 LSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPN 176
Query: 367 L-QGLYLGNNQLTGSIPWSLGSLGGLVKLNLTG-NKLSGKVPTSFGNLKELTHLDLSFNE 424
L + L L L L+L+ + + G + L L +
Sbjct: 177 LVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIV 236
Query: 425 LDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKI 465
DG L + +L ++ P N W I
Sbjct: 237 PDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGI 277
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.9 bits (115), Expect = 1e-06
Identities = 46/287 (16%), Positives = 94/287 (32%), Gaps = 24/287 (8%)
Query: 2 LSFNALSGSLPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPE 61
L+ L + L ++ F ++ + L + +++ + LS++
Sbjct: 7 LTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPF-RVQHMDLSNSVIEVSTLHG 65
Query: 62 I-GNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDG--NLLTGTIEGVFEKCSNLSQ 118
I CS L+++SL LS I L + +L ++L G ++ + CS L +
Sbjct: 66 ILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 125
Query: 119 LVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLP 178
L + + + + + VS ++ + N
Sbjct: 126 LNLSWCFDF----------------TEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLST 169
Query: 179 YEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDL-NSNLFDGIIPYELGDCISLTT 237
+ + + MLK +E L+ L L L ELG+ +L T
Sbjct: 170 LVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKT 229
Query: 238 LDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQA 284
L + G + L LQ ++ ++ + + Q
Sbjct: 230 LQVFGIVPDGTLQLLKEALPHLQ---INCSHFTTIARPTIGNKKNQE 273
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 59.8 bits (143), Expect = 6e-10
Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 9/92 (9%)
Query: 324 LNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPW 383
N S +I +L L++S N+L +P+ +L+ L N L +P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPALPP---RLERLIASFNHLA-EVPE 321
Query: 384 SLGSLGGLVKLNLTGNKLSGKVPTSFGNLKEL 415
+ L +L++ N L + P ++++L
Sbjct: 322 LPQN---LKQLHVEYNPLR-EFPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 49.4 bits (116), Expect = 1e-06
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 371 YLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLP 430
N + I L +LN++ NKL ++P L+ L SFN L ++P
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRLE---RLIASFNHL-AEVP 320
Query: 431 SSLSNILNLVGLYLQHNKLSGPVDELFS 458
NL L++++N L D S
Sbjct: 321 ELPQ---NLKQLHVEYNPLREFPDIPES 345
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 47.1 bits (110), Expect = 7e-06
Identities = 21/98 (21%), Positives = 32/98 (32%), Gaps = 8/98 (8%)
Query: 463 WKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNR 522
++ N + L L++ NK E+P L E L S N
Sbjct: 260 SELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRL---ERLIASFNH 315
Query: 523 LCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNL 560
L ++PE NL L + N L ++L
Sbjct: 316 L-AEVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 46.7 bits (109), Expect = 8e-06
Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 28 NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELC 87
N S + S +E L +S+N+ + ++P L+ + S N L+ +P
Sbjct: 270 NASSNEIRSLCDLPPSLEELNVSNNK-LIELPALPPR---LERLIASFNHLA-EVPELP- 323
Query: 88 TSESLEEIDLDGNLLTGTIEGVFEKCSNL 116
++L+++ ++ N L + E +L
Sbjct: 324 --QNLKQLHVEYNPLR-EFPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 46.4 bits (108), Expect = 1e-05
Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 24/111 (21%)
Query: 216 LNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPS 275
N I SL L++ NN L L +L+ L+ S N+L+ +P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL----PPRLERLIASFNHLAE-VPE 321
Query: 276 KPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNN 326
P + L + + YN L P+ S V DL +N+
Sbjct: 322 LPQN---------LKQL------HVEYNPLRE-FPDIPES---VEDLRMNS 353
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 45.6 bits (106), Expect = 2e-05
Identities = 23/121 (19%), Positives = 34/121 (28%), Gaps = 35/121 (28%)
Query: 417 HLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFD 476
N ++ S +L L + +NKL
Sbjct: 264 PNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-------------------------- 297
Query: 477 GGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSN 536
LP L L N E+P N L+ L V N L + P+ S+ +
Sbjct: 298 -ELPALPPR---LERLIASFNHLA-EVPELPQN---LKQLHVEYNPLR-EFPDIPESVED 348
Query: 537 L 537
L
Sbjct: 349 L 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 42.9 bits (99), Expect = 1e-04
Identities = 21/114 (18%), Positives = 35/114 (30%), Gaps = 36/114 (31%)
Query: 399 NKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFS 458
N S ++ + L L++S N+L +LP+ L L N L+
Sbjct: 270 NASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPP---RLERLIASFNHLA-------- 317
Query: 459 NSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTG--EIPPDLGNL 510
+P N L L + N +IP + +L
Sbjct: 318 -------------------EVPELPQN---LKQLHVEYNPLREFPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 41.7 bits (96), Expect = 3e-04
Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 13/109 (11%)
Query: 40 NWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDG 99
+++ L N +I L+ +++SNN L +P LE +
Sbjct: 258 GLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPP---RLERLIASF 313
Query: 100 NLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNN 148
N L V E NL QL + N + P+ + DL N+
Sbjct: 314 NHLA----EVPELPQNLKQLHVEYNPLR-EFPDIPESVE----DLRMNS 353
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 41.0 bits (94), Expect = 5e-04
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Query: 341 TNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSL 388
L+L+ L+ +P L+ L N LT +P SL
Sbjct: 38 RQAHELELNNLGLSS-LPELPP---HLESLVASCNSLT-ELPELPQSL 80
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 41.0 bits (94), Expect = 6e-04
Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 9/89 (10%)
Query: 73 LSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPE 132
N S I SLEE+++ N L + L +L+ NH+ +PE
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLI----ELPALPPRLERLIASFNHL-AEVPE 321
Query: 133 YLSKLPLMVLDLDSNNFTGI--IPVSIWN 159
L L ++ N IP S+ +
Sbjct: 322 LPQN--LKQLHVEYNPLREFPDIPESVED 348
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 39.0 bits (89), Expect = 0.002
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Query: 494 LHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPR 553
+ N + EI LE L+VS N+L ++P L L + N L +
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPA---LPPRLERLIASFNHLAEV--- 319
Query: 554 SGICQNLSKISLTGNK 569
+ QNL ++ + N
Sbjct: 320 PELPQNLKQLHVEYNP 335
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 54.0 bits (129), Expect = 2e-09
Identities = 26/119 (21%), Positives = 38/119 (31%), Gaps = 16/119 (13%)
Query: 237 TLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHG 296
L L + +L+ L + L + L LSHN L P L+ ++
Sbjct: 2 VLHLAHKDLTVL--CHLEQLLLVTHLDLSHNRLRA-------------LPPALAALRCLE 46
Query: 297 VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTG 355
V S N L + + L NN + L L L+L N L
Sbjct: 47 VLQASDNALENVDGVANLPRLQELLLC-NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 53.6 bits (128), Expect = 3e-09
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 11/127 (8%)
Query: 394 LNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPV 453
L+L L+ V L +THLDLS N L P +L+ + L L N +
Sbjct: 3 LHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRAL-PPALAALRCLEVLQASDN----AL 55
Query: 454 DELFSNSAAWKIATMNMSNN-LFDGGLPRSLGNLSYLTNLDLHENKFTGE--IPPDLGNL 510
+ + + ++ + + NN L + L + L L+L N E I L +
Sbjct: 56 ENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Query: 511 M-QLEYL 516
+ + +
Sbjct: 116 LPSVSSI 122
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 53.2 bits (127), Expect = 5e-09
Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 14/128 (10%)
Query: 418 LDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDG 477
L L+ +L + L +L + L L HN+L L + + + + DG
Sbjct: 3 LHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDG 60
Query: 478 GLPRSLGNLSYLTNLDLHENKFTG-EIPPDLGNLMQLEYLDVSRNRLCG------QIPET 530
L L L N+ L + +L L++ N LC ++ E
Sbjct: 61 VANLP-----RLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Query: 531 MCSLSNLL 538
+ S+S++L
Sbjct: 116 LPSVSSIL 123
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 49.3 bits (117), Expect = 1e-07
Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 9/126 (7%)
Query: 297 VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGP 356
V L++ L+ + L ++V L L++N L P +L+ L L L S N L
Sbjct: 2 VLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALENV 58
Query: 357 IPSEFGDSIKLQGLYLGNNQLTG-SIPWSLGSLGGLVKLNLTGNKLSGK---VPTSFGNL 412
++ L L NN+L + L S LV LNL GN L + L
Sbjct: 59 DGVANLPRLQE--LLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEML 116
Query: 413 KELTHL 418
++ +
Sbjct: 117 PSVSSI 122
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 42.0 bits (98), Expect = 3e-05
Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 18/121 (14%)
Query: 260 QCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVV 319
+ L L+H +L+ ++ L + H DLS+NRL P +
Sbjct: 1 RVLHLAHKDLTVL-----------CHLEQLLLVTH---LDLSHNRLRALPPALAALRCLE 46
Query: 320 VDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTG-PIPSEFGDSIKLQGLYLGNNQLT 378
V + + + ++ L L L L N+L +L L L N L
Sbjct: 47 VL---QASDNALENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 103
Query: 379 G 379
Sbjct: 104 Q 104
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 39.3 bits (91), Expect = 3e-04
Identities = 24/124 (19%), Positives = 46/124 (37%), Gaps = 10/124 (8%)
Query: 2 LSFNALSGSLPEELSDLPILTF-AAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP 60
L+ L+ L L ++T N+L P+ ++ +
Sbjct: 5 LAHKDLTV--LCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVL---QASDNALENVD 59
Query: 61 EIGNCSMLKSISLSNNFL-SGSIPRELCTSESLEEIDLDGNLLT---GTIEGVFEKCSNL 116
+ N L+ + L NN L + + L + L ++L GN L G E + E ++
Sbjct: 60 GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 119
Query: 117 SQLV 120
S ++
Sbjct: 120 SSIL 123
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 38.9 bits (90), Expect = 5e-04
Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 25/101 (24%)
Query: 492 LDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIP---------------------ET 530
L L T + L L+ + +LD+S NRL P +
Sbjct: 3 LHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDG 60
Query: 531 MCSLSNLLYLSLAENRLEGMVPRSGI--CQNLSKISLTGNK 569
+ +L L L L NRL+ + C L ++L GN
Sbjct: 61 VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNS 101
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 38.5 bits (89), Expect = 6e-04
Identities = 27/128 (21%), Positives = 42/128 (32%), Gaps = 11/128 (8%)
Query: 141 VLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGH 200
VL L + T + + + ++N L P AAL L +
Sbjct: 2 VLHLAHKDLTVLCHLE--QLLLVTHLDLSHNRLRALPP----ALAALRCLEVLQASDNAL 55
Query: 201 L-PKEIGNLSALSVLDLNSN-LFDGIIPYELGDCISLTTLDLGNNNLS---GLIPEKIAD 255
+ NL L L L +N L L C L L+L N+L G+
Sbjct: 56 ENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Query: 256 LAQLQCLV 263
L + ++
Sbjct: 116 LPSVSSIL 123
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.1 bits (138), Expect = 3e-09
Identities = 17/118 (14%), Positives = 32/118 (27%), Gaps = 5/118 (4%)
Query: 364 SIKLQGLYLGNNQLTGS-IPWSLGSLGGLVKLNLTGNKLSGK----VPTSFGNLKELTHL 418
S+ +Q L + +L+ + L L + L L+ + ++ L L
Sbjct: 1 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 60
Query: 419 DLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFD 476
+L NEL + L +Q L +
Sbjct: 61 NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELH 118
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.0 bits (117), Expect = 9e-07
Identities = 16/114 (14%), Positives = 34/114 (29%), Gaps = 5/114 (4%)
Query: 187 LERLVLTNNMLK-GHLPKEIGNLSALSVLDLNSNLFDGI----IPYELGDCISLTTLDLG 241
++ L + L + + L V+ L+ I L +L L+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 242 NNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHH 295
+N L + + Q + +L + + + L +Q
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQEL 117
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.2 bits (115), Expect = 2e-06
Identities = 15/91 (16%), Positives = 27/91 (29%), Gaps = 5/91 (5%)
Query: 298 FDLSYNRLSGPIPEELGSCVV-VVDLLLNNNMLSGK----IPGSLSRLTNLTTLDLSRNQ 352
D+ LS EL + + L++ L+ I +L L L+L N+
Sbjct: 7 LDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNE 66
Query: 353 LTGPIPSEFGDSIKLQGLYLGNNQLTGSIPW 383
L ++ + L
Sbjct: 67 LGDVGVHCVLQGLQTPSCKIQKLSLQNCCLT 97
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.2 bits (115), Expect = 2e-06
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Query: 322 LLLNNNMLSGK----IPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK-----LQGLYL 372
L L + +S + +L +L LDLS N L + +S++ L+ L L
Sbjct: 374 LWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVL 433
Query: 373 GNNQLTGSIPWSLGSL 388
+ + + L +L
Sbjct: 434 YDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.4 bits (113), Expect = 3e-06
Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 5/91 (5%)
Query: 465 IATMNMS-NNLFDGGLPRSLGNLSYLTNLDLHENKFTGE----IPPDLGNLMQLEYLDVS 519
I ++++ L D L L + L + T I L L L++
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 520 RNRLCGQIPETMCSLSNLLYLSLAENRLEGM 550
N L + + + L+
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.4 bits (113), Expect = 3e-06
Identities = 17/125 (13%), Positives = 36/125 (28%), Gaps = 28/125 (22%)
Query: 414 ELTHLDLSFNEL-DGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSN 472
++ LD+ EL D + L + + L L+ + +
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLT---EARCKD------------- 46
Query: 473 NLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQ-----LEYLDVSRNRLCGQI 527
+ +L L L+L N+ + +Q ++ L + L G
Sbjct: 47 ------ISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAG 100
Query: 528 PETMC 532
+
Sbjct: 101 CGVLS 105
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.0 bits (112), Expect = 4e-06
Identities = 19/100 (19%), Positives = 32/100 (32%), Gaps = 9/100 (9%)
Query: 233 ISLTTLDLGNNNLSGL-IPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSF 291
+ + +LD+ LS E + L Q Q + L L+ SS R P L+
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALR--VNPALAE 59
Query: 292 IQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSG 331
+ +L N L + + + L
Sbjct: 60 L------NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.3 bits (110), Expect = 6e-06
Identities = 11/85 (12%), Positives = 23/85 (27%), Gaps = 4/85 (4%)
Query: 323 LLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK----LQGLYLGNNQLT 378
+ + + L L + L LT + +++ L L L +N+L
Sbjct: 9 IQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELG 68
Query: 379 GSIPWSLGSLGGLVKLNLTGNKLSG 403
+ + L
Sbjct: 69 DVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.9 bits (109), Expect = 9e-06
Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 11/95 (11%)
Query: 207 NLSALSVLDLNSNLFDGI----IPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQ---- 258
S L VL L + L SL LDL NN L ++ + +
Sbjct: 367 PGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGC 426
Query: 259 -LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFI 292
L+ LVL S + + + + + P L I
Sbjct: 427 LLEQLVLYDIYWSEEMEDRLQA--LEKDKPSLRVI 459
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.5 bits (108), Expect = 1e-05
Identities = 14/98 (14%), Positives = 32/98 (32%), Gaps = 13/98 (13%)
Query: 35 PSWLGNWNQMESLLLSSNQF----IGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTS- 89
+ + L L+ + + L+ + LSNN L + +L S
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 90 ----ESLEEIDLDGNLLTGT----IEGVFEKCSNLSQL 119
LE++ L + ++ + + +L +
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 459
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.5 bits (108), Expect = 1e-05
Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 9/85 (10%)
Query: 183 NAAALERLVLTNNMLKG----HLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCI----- 233
+ L L L + + L + +L LDL++N +L + +
Sbjct: 367 PGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGC 426
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQ 258
L L L + S + +++ L +
Sbjct: 427 LLEQLVLYDIYWSEEMEDRLQALEK 451
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.7 bits (106), Expect = 2e-05
Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 9/90 (10%)
Query: 334 PGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIK----LQGLYLGNNQLTGSIPWSLGS-- 387
G + L L L+ ++ S ++ L+ L L NN L + L
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 388 ---LGGLVKLNLTGNKLSGKVPTSFGNLKE 414
L +L L S ++ L++
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEMEDRLQALEK 451
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.8 bits (101), Expect = 8e-05
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 64 NCSMLKSISLSNNFLSG----SIPRELCTSESLEEIDLDGNLLTGT-----IEGVFEKCS 114
S+L+ + L++ +S S+ L + SL E+DL N L +E V +
Sbjct: 367 PGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGC 426
Query: 115 NLSQLVIFRNHIYGSIPEYLSKL 137
L QLV++ + + + L L
Sbjct: 427 LLEQLVLYDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.7 bits (98), Expect = 2e-04
Identities = 16/75 (21%), Positives = 23/75 (30%), Gaps = 9/75 (12%)
Query: 391 LVKLNLTGNKLSGK----VPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-----NLVG 441
L L L +S + + L LDLS N L L + L
Sbjct: 371 LRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQ 430
Query: 442 LYLQHNKLSGPVDEL 456
L L S +++
Sbjct: 431 LVLYDIYWSEEMEDR 445
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.1 bits (94), Expect = 6e-04
Identities = 12/81 (14%), Positives = 26/81 (32%), Gaps = 9/81 (11%)
Query: 463 WKIATMNMSNNLFDG----GLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQ-----L 513
+ + +++ L +L L LDL N L ++ L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 514 EYLDVSRNRLCGQIPETMCSL 534
E L + ++ + + +L
Sbjct: 429 EQLVLYDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.7 bits (93), Expect = 7e-04
Identities = 15/93 (16%), Positives = 31/93 (33%), Gaps = 11/93 (11%)
Query: 68 LKSISLSNNFLSGSIPRELCTS-ESLEEIDLDGNLLTG----TIEGVFEKCSNLSQLVIF 122
++S+ + LS + EL + + + LD LT I L++L +
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 123 RNHIYGSIPEYLSK------LPLMVLDLDSNNF 149
N + + + + L L +
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCL 96
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.0 bits (91), Expect = 0.001
Identities = 17/108 (15%), Positives = 30/108 (27%), Gaps = 25/108 (23%)
Query: 409 FGNLKELTHLDLSFNELDGQ----LPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWK 464
L L L+ ++ L ++L +L L L +N L S
Sbjct: 365 GQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVR-- 422
Query: 465 IATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQ 512
L L L++ ++ E+ L L +
Sbjct: 423 -------------------QPGCLLEQLVLYDIYWSEEMEDRLQALEK 451
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.8 bits (88), Expect = 0.003
Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 7/79 (8%)
Query: 44 MESLLLSSNQFIGKIPPEI-GNCSMLKSISLSNNFLSG----SIPRELCTSESLEEIDLD 98
++SL + + E+ + + L + L+ I L + +L E++L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 99 GNLLTGTIEGVFEKCSNLS 117
N L GV L
Sbjct: 64 SNELGD--VGVHCVLQGLQ 80
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 55.2 bits (131), Expect = 4e-09
Identities = 35/193 (18%), Positives = 59/193 (30%), Gaps = 18/193 (9%)
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293
TT+D L IP I L+L+ N L +P L ++
Sbjct: 9 EGTTVDCTGRGLKE-IPRDIP--LHTTELLLNDNELGRISS-----DGLFGRLPHLVKLE 60
Query: 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQL 353
+ + + N + L L TL+L NQ+
Sbjct: 61 LKRNQLTGIEPNAFEGASHIQELQL------GENKIKEISNKMFLGLHQLKTLNLYDNQI 114
Query: 354 TGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLK 413
+ +P F L L L +N + + L K +L G P+ ++
Sbjct: 115 SCVMPGSFEHLNSLTSLNLASNPFNCNCHLA-WFAEWLRKKSLNGGAARCGAPSK---VR 170
Query: 414 ELTHLDLSFNELD 426
++ DL +E
Sbjct: 171 DVQIKDLPHSEFK 183
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 42.1 bits (97), Expect = 1e-04
Identities = 32/179 (17%), Positives = 59/179 (32%), Gaps = 7/179 (3%)
Query: 394 LNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPV 453
++ TG L ++P T L L+ NEL L L + L+ +
Sbjct: 13 VDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLV-KLELKRNQLTG 68
Query: 454 DELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQL 513
E + A I + + N + L L L+L++N+ + +P +L L
Sbjct: 69 IEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSL 128
Query: 514 EYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLC 572
L++ + L SL P +++ L ++ C
Sbjct: 129 TSLNL-ASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSK--VRDVQIKDLPHSEFKC 184
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 55.0 bits (131), Expect = 8e-09
Identities = 33/217 (15%), Positives = 59/217 (27%), Gaps = 34/217 (15%)
Query: 207 NLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSH 266
L+ + + + D +TTL ++ + E + L L L L
Sbjct: 17 ALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKD 72
Query: 267 NNLSGPIPSK--------------------------PSSYFRQANMPDLSFIQHHGVFDL 300
N ++ P K + +
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQ 132
Query: 301 SYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSE 360
I + L+ L+ L+ LTTL N+++ P
Sbjct: 133 VLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP-- 190
Query: 361 FGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLT 397
L ++L NNQ++ P L + L + LT
Sbjct: 191 LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 52.7 bits (125), Expect = 4e-08
Identities = 39/225 (17%), Positives = 74/225 (32%), Gaps = 21/225 (9%)
Query: 356 PIPSEFGDSI--KLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLK 413
I F D + G + +T ++ + L G+ L+ G ++ L
Sbjct: 8 AINVIFPDPALANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT--IEGVQYLN 63
Query: 414 ELTHLDLSFNEL-----DGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATM 468
L L+L N++ L L+ L + ++
Sbjct: 64 NLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVT 123
Query: 469 NMSNNLFDGGLPRSLGNLSYLTNLD-------LHENKFTGEIPPDLGNLMQLEYLDVSRN 521
++ L L ++ ++ L L L NL +L L N
Sbjct: 124 PLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDN 183
Query: 522 RLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLT 566
++ P + SL NL+ + L N++ + P + NL ++LT
Sbjct: 184 KISDISP--LASLPNLIEVHLKNNQISDVSPLAN-TSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 48.9 bits (115), Expect = 9e-07
Identities = 38/215 (17%), Positives = 70/215 (32%), Gaps = 20/215 (9%)
Query: 340 LTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGN 399
L N + ++ +T + D + L +T +I + L L+ L L N
Sbjct: 18 LANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDN 73
Query: 400 KLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSL------------SNILNLVGLYLQHN 447
+++ P L + + + +++ L GL
Sbjct: 74 QITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 133
Query: 448 KLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDL 507
+ A +S L NLS LT L +NK + P L
Sbjct: 134 LYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--L 191
Query: 508 GNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSL 542
+L L + + N++ P + + SNL ++L
Sbjct: 192 ASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL 224
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 37.3 bits (85), Expect = 0.004
Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 35 PSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEE 94
+ L N +++ +L N+ P + + L + L NN +S P L + +L
Sbjct: 166 LTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFI 221
Query: 95 IDL 97
+ L
Sbjct: 222 VTL 224
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 50.8 bits (120), Expect = 2e-07
Identities = 37/194 (19%), Positives = 60/194 (30%), Gaps = 22/194 (11%)
Query: 340 LTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGN 399
+L + +T + +S + + N+ + + L + KL L GN
Sbjct: 23 FAETIKDNLKKKSVTDAVTQNELNS--IDQIIANNSDIKS--VQGIQYLPNVTKLFLNGN 78
Query: 400 KLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSN--------------ILNLVGLYLQ 445
KL+ P NLK L L L N++ I LV L
Sbjct: 79 KLTDIKP--LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQL 136
Query: 446 HNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPP 505
+ G + +S L L+ L NL L +N +
Sbjct: 137 ESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD--LR 194
Query: 506 DLGNLMQLEYLDVS 519
L L L+ L++
Sbjct: 195 ALAGLKNLDVLELF 208
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 48.9 bits (115), Expect = 6e-07
Identities = 35/215 (16%), Positives = 65/215 (30%), Gaps = 28/215 (13%)
Query: 207 NLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSH 266
+ +L + + S+ + N+++ + I L + L L+
Sbjct: 22 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNG 77
Query: 267 NNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNN 326
N L+ P + + + DL + +
Sbjct: 78 NKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSL------------------SL 119
Query: 327 NMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLG 386
L L L +L L N++T + L +NQ++ +P L
Sbjct: 120 EHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLE--DNQISDIVP--LA 175
Query: 387 SLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLS 421
L L L L+ N +S + LK L L+L
Sbjct: 176 GLTKLQNLYLSKNHISD--LRALAGLKNLDVLELF 208
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 45.8 bits (107), Expect = 7e-06
Identities = 39/214 (18%), Positives = 73/214 (34%), Gaps = 19/214 (8%)
Query: 356 PIPSEFGDSI--KLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLK 413
PI F D + L +T ++ + L + ++ + + L
Sbjct: 13 PIKQIFSDDAFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIKS--VQGIQYLP 68
Query: 414 ELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNN 473
+T L L+ N+L P + L +S ++S
Sbjct: 69 NVTKLFLNGNKLTDIKPLA--------NLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLE 120
Query: 474 LFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCS 533
L +L L +L L NK T L +L+ L + N++ +P +
Sbjct: 121 HNGISDINGLVHLPQLESLYLGNNKITDITVLS--RLTKLDTLSLEDNQISDIVP--LAG 176
Query: 534 LSNLLYLSLAENRLEGMVPRSGICQNLSKISLTG 567
L+ L L L++N + + +G +NL + L
Sbjct: 177 LTKLQNLYLSKNHISDLRALAG-LKNLDVLELFS 209
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 40.8 bits (94), Expect = 4e-04
Identities = 38/211 (18%), Positives = 73/211 (34%), Gaps = 16/211 (7%)
Query: 55 IGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCS 114
I +I + + +L ++ ++ + S +++I + + + +
Sbjct: 14 IKQIFSD-DAFAETIKDNLKKKSVTDAVTQNELNS--IDQIIANNSDIKSVQG--IQYLP 68
Query: 115 NLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLE 174
N+++L + N + + L+ L + N + + N
Sbjct: 69 NVTKLFLNGNKLTD--IKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNG--- 123
Query: 175 GSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCIS 234
S + + LE L L NN + + L+ L L L N I+P L
Sbjct: 124 ISDINGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTK 179
Query: 235 LTTLDLGNNNLSGLIPEKIADLAQLQCLVLS 265
L L L N++S L +A L L L L
Sbjct: 180 LQNLYLSKNHISDL--RALAGLKNLDVLELF 208
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 51.4 bits (121), Expect = 3e-07
Identities = 48/352 (13%), Positives = 100/352 (28%), Gaps = 41/352 (11%)
Query: 68 LKSISLSNNFLSG----SIPRELCTSESLEEIDLDGNLLTG----TIEGVFEKCSNLSQL 119
++ SL + ++ S+ L +S++EI L GN + + +L
Sbjct: 5 IEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIA 64
Query: 120 VIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPY 179
S + + + ++ ++ L ++N
Sbjct: 65 -------------EFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN-------A 104
Query: 180 EVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLD 239
A L+ + HL L + + L + + + + L ++
Sbjct: 105 FGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSII 164
Query: 240 LGNNNLSGLIPEKIADLAQ-LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVF 298
G N L ++ A Q + L +G P +
Sbjct: 165 CGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQD 224
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSR------LTNLTTLDLSRNQ 352
+ + S + L S + +L LN+ +LS + ++ L TL L N+
Sbjct: 225 NTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNE 284
Query: 353 LTGPIPSEFGDSI-----KLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGN 399
+ I L L L N+ + + + G
Sbjct: 285 IELDAVRTLKTVIDEKMPDLLFLELNGNRF-SEEDDVVDEIREVFSTRGRGE 335
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 47.2 bits (110), Expect = 6e-06
Identities = 46/348 (13%), Positives = 91/348 (26%), Gaps = 46/348 (13%)
Query: 33 SLPSWLGNWNQMESLLLSSNQF----IGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCT 88
S+ + L + ++ ++LS N + I + L+ S+ F
Sbjct: 22 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEA 81
Query: 89 SESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEY----LSKLPLMVLDL 144
L + L L + +I + + P +
Sbjct: 82 LRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKI 141
Query: 145 DSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKE 204
+ N+ L N LE E RL+ T M++ + E
Sbjct: 142 ARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPE 201
Query: 205 IGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVL 264
L L L + + S + + L+ L L
Sbjct: 202 GIEHLLLEGLAYCQELKVLDLQDNTFTHLG-----------SSALAIALKSWPNLRELGL 250
Query: 265 SHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLL 324
+ LS + F + L + L YN + L + +
Sbjct: 251 NDCLLSARGAAAVVDAFSKLENIGLQTL------RLQYNEIELDAVRTLKTVI------- 297
Query: 325 NNNMLSGKIPGSLSRLTNLTTLDLSRNQLT--GPIPSEFGDSIKLQGL 370
++ +L L+L+ N+ + + E + +G
Sbjct: 298 ------------DEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRGR 333
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 44.1 bits (102), Expect = 5e-05
Identities = 37/307 (12%), Positives = 78/307 (25%), Gaps = 44/307 (14%)
Query: 187 LERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDG----IIPYELGDCISLTTLDLGN 242
L+ +T K + + ++ + L+ N + + L + +
Sbjct: 10 LKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSD 68
Query: 243 NNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSY 302
+ E L L +L L S + +H + L
Sbjct: 69 IFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYL 128
Query: 303 NRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFG 362
+ + +L +N + S+ N +
Sbjct: 129 HNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLL 188
Query: 363 DSIKLQGLYLGNNQLTGSIPWSLGSLGGLV----------------------------KL 394
++K+ + + + L L +L
Sbjct: 189 HTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 248
Query: 395 NLTGNKLSGKVPT------SFGNLKELTHLDLSFNELDGQLPSSLSNIL-----NLVGLY 443
L LS + S L L L +NE++ +L ++ +L+ L
Sbjct: 249 GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLE 308
Query: 444 LQHNKLS 450
L N+ S
Sbjct: 309 LNGNRFS 315
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 38.3 bits (87), Expect = 0.004
Identities = 12/86 (13%), Positives = 24/86 (27%), Gaps = 11/86 (12%)
Query: 463 WKIATMNMSNNLFDGGLPR-----SLGNLSYLTNLDLHENKFTGEIPPDL-----GNLMQ 512
L G S L L L N+ + L +
Sbjct: 244 NLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPD 303
Query: 513 LEYLDVSRNRLCGQIPETMCSLSNLL 538
L +L+++ NR + + + + +
Sbjct: 304 LLFLELNGNRF-SEEDDVVDEIREVF 328
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.9 bits (113), Expect = 6e-07
Identities = 29/132 (21%), Positives = 47/132 (35%), Gaps = 7/132 (5%)
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTG--P 356
DL R +L + + V L ++M + + + L +L+LS N+L
Sbjct: 28 DLKGLR----SDPDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDD 82
Query: 357 IPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELT 416
+ S + L+ L L N+L L +L L GN LS + +
Sbjct: 83 MSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIR 142
Query: 417 HLDLSFNELDGQ 428
LDG
Sbjct: 143 ERFPKLLRLDGH 154
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.7 bits (102), Expect = 2e-05
Identities = 26/155 (16%), Positives = 50/155 (32%), Gaps = 6/155 (3%)
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIP 358
+L ++ + + L+ L + L L+ + +
Sbjct: 3 ELKPEQVEQ-LKLIMSKRYDGSQQALDLKGL--RSDPDLVAQNIDVVLNRRSSMAAT-LR 58
Query: 359 SEFGDSIKLQGLYLGNNQLTG--SIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELT 416
+ +L L L NN+L + + L LNL+GN+L + +L
Sbjct: 59 IIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLE 118
Query: 417 HLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSG 451
L L N L + I + + + +L G
Sbjct: 119 ELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLDG 153
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.3 bits (88), Expect = 0.001
Identities = 19/146 (13%), Positives = 43/146 (29%), Gaps = 4/146 (2%)
Query: 395 NLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVD 454
L ++ ++ + + L L + L V L + + +
Sbjct: 3 ELKPEQVE-QLKLIMSKRYDGSQQALDLKGL--RSDPDLVAQNIDVVLNRRSSMAATL-R 58
Query: 455 ELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLE 514
+ N ++ + + + L L+L N+ E D ++LE
Sbjct: 59 IIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLE 118
Query: 515 YLDVSRNRLCGQIPETMCSLSNLLYL 540
L + N L + +S +
Sbjct: 119 ELWLDGNSLSDTFRDQSTYISAIRER 144
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.4 bits (113), Expect = 1e-06
Identities = 27/214 (12%), Positives = 63/214 (29%), Gaps = 19/214 (8%)
Query: 234 SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293
+ L L + + L+ + +S N++ I + S + + +
Sbjct: 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 89
Query: 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNN----------------NMLSGKIPGSL 337
+ + + + L S + L + N+ + + +
Sbjct: 90 NLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFV 149
Query: 338 SRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLT 397
L L++N + F + + NN L G V L+++
Sbjct: 150 GLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDIS 209
Query: 398 GNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPS 431
++ NLK+L + +LP+
Sbjct: 210 RTRIHSLPSYGLENLKKLRARSTYNLK---KLPT 240
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.4 bits (113), Expect = 1e-06
Identities = 36/223 (16%), Positives = 66/223 (29%), Gaps = 5/223 (2%)
Query: 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSI 381
L + ++ +IP L N L +L F L+ + + N + I
Sbjct: 13 FLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVI 69
Query: 382 PWSLGSLGGLVKLNLTG--NKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNL 439
+ S + N L P +F NL L +L +S + + L
Sbjct: 70 EADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQK 129
Query: 440 VGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKF 499
V L +Q N ++ +++ + ++ N + N
Sbjct: 130 VLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNL 189
Query: 500 TGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSL 542
LD+SR R+ + +L L S
Sbjct: 190 EELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 232
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.6 bits (111), Expect = 3e-06
Identities = 34/246 (13%), Positives = 72/246 (29%), Gaps = 36/246 (14%)
Query: 59 PPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQ 118
I +CS + + ++ IP +L + E+ L +G F +L +
Sbjct: 2 HHRICHCS-NRVFLCQESKVT-EIPSDLPRN--AIELRFVLTKLRVIQKGAFSGFGDLEK 57
Query: 119 LVIFRNHIYGSIPEYLSKLPLMV---LDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEG 175
+ I +N + I + + +NN I P + N L +N ++
Sbjct: 58 IEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKH 117
Query: 176 SLPYEVGNAAALER--------------------------LVLTNNMLKGHLPKEIGNLS 209
++ L L N ++
Sbjct: 118 LPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQ 177
Query: 210 ALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNL 269
+ ++N + + LD+ + L + +L +L+ S NL
Sbjct: 178 LDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLR--ARSTYNL 235
Query: 270 SGPIPS 275
+P+
Sbjct: 236 K-KLPT 240
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.3 bits (105), Expect = 1e-05
Identities = 30/233 (12%), Positives = 64/233 (27%), Gaps = 6/233 (2%)
Query: 342 NLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKL 401
+ +++T IPS+ + L +L + G L K+ ++ N +
Sbjct: 9 SNRVFLCQESKVTE-IPSDLPRN--AIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 65
Query: 402 SGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHN--KLSGPVDELFSN 459
+ + H + + + YL + + D +
Sbjct: 66 LEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIH 125
Query: 460 SAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVS 519
S + + + N+ +G L L++N E
Sbjct: 126 SLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSD 185
Query: 520 RNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS-GICQNLSKISLTGNKDL 571
N L + S + L ++ R+ + + L S K L
Sbjct: 186 NNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLKKL 238
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.9 bits (91), Expect = 8e-04
Identities = 34/228 (14%), Positives = 71/228 (31%), Gaps = 5/228 (2%)
Query: 297 VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGP 356
VF ++++ IP +L + + L G+ S +L +++S+N +
Sbjct: 12 VFLCQESKVTE-IPSDLPRNAIELRF--VLTKLRVIQKGAFSGFGDLEKIEISQNDVLEV 68
Query: 357 IPSEFGDSIKLQGLYLGN--NQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKE 414
I ++ ++ N L P + +L L L ++ + + +
Sbjct: 69 IEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQ 128
Query: 415 LTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNL 474
LD+ N + + L+ + L NK + + NN
Sbjct: 129 KVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNN 188
Query: 475 FDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNR 522
+ S LD+ + L NL +L +
Sbjct: 189 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK 236
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.1 bits (108), Expect = 3e-06
Identities = 26/127 (20%), Positives = 41/127 (32%), Gaps = 1/127 (0%)
Query: 391 LVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLS 450
+L+L G K+ + L + +D S NE+ L L + +
Sbjct: 20 DRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRI 78
Query: 451 GPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNL 510
G + I T N L D SL +L+YL L + +
Sbjct: 79 GEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKV 138
Query: 511 MQLEYLD 517
Q+ LD
Sbjct: 139 PQVRVLD 145
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.2 bits (98), Expect = 5e-05
Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 5/91 (5%)
Query: 468 MNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQI 527
+ ++ L + N LDL K I L Q + +D S N +
Sbjct: 1 VKLTAELIE--QAAQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR--K 55
Query: 528 PETMCSLSNLLYLSLAENRLEGMVPRSGICQ 558
+ L L L + NR+ +
Sbjct: 56 LDGFPLLRRLKTLLVNNNRICRIGEGLDQAL 86
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.6 bits (86), Expect = 0.002
Identities = 20/149 (13%), Positives = 40/149 (26%), Gaps = 17/149 (11%)
Query: 216 LNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNL------ 269
L + L + Y + + LDL + I A L Q + S N +
Sbjct: 3 LTAELIEQAAQYT--NAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKLDGF 59
Query: 270 ----SGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSG-PIPEELGSCVVVVDLLL 324
++ + + L+ N L + L S + L +
Sbjct: 60 PLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCI 119
Query: 325 NN---NMLSGKIPGSLSRLTNLTTLDLSR 350
+ ++ + LD +
Sbjct: 120 LRNPVTNKKHYRLYVIYKVPQVRVLDFQK 148
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.2 bits (105), Expect = 6e-06
Identities = 12/143 (8%), Positives = 30/143 (20%), Gaps = 14/143 (9%)
Query: 232 CISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSF 291
+ L + + L L + + + + + +
Sbjct: 7 PHGSSGLRCTRDGALD-SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVK 65
Query: 292 IQHHG-------------VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLS 338
+LS+N L + + + +L N + L
Sbjct: 66 SGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQ 125
Query: 339 RLTNLTTLDLSRNQLTGPIPSEF 361
R + +L
Sbjct: 126 RWEEEGLGGVPEQKLQCHGQGPL 148
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.2 bits (100), Expect = 2e-05
Identities = 25/170 (14%), Positives = 40/170 (23%), Gaps = 26/170 (15%)
Query: 341 TNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNK 400
+ L +R+ + L LY+ N Q +
Sbjct: 8 HGSSGLRCTRDGALD-SLHHLPGAENLTELYIENQQHLQHLELR---------------- 50
Query: 401 LSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNS 460
L EL +L + + L P + L L L N L +
Sbjct: 51 -------DLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGL 103
Query: 461 AAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNL 510
+ N L R L + E K L ++
Sbjct: 104 --SLQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQGPLAHM 151
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.4 bits (90), Expect = 5e-04
Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 4/143 (2%)
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIP-GSLSRLTNLTTLDLSRNQLTGPI 357
+ + L + +L + N + L L L L + ++ L
Sbjct: 14 RCTRDGALD-SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVA 72
Query: 358 PSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLS-GKVPTSFGNLKELT 416
P F + +L L L N L S+ W L +L L+GN L +E
Sbjct: 73 PDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEG 131
Query: 417 HLDLSFNELDGQLPSSLSNILNL 439
+ +L L+++ N
Sbjct: 132 LGGVPEQKLQCHGQGPLAHMPNA 154
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 45.8 bits (107), Expect = 6e-06
Identities = 40/201 (19%), Positives = 69/201 (34%), Gaps = 24/201 (11%)
Query: 356 PIPSEFGDSI--KLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLK 413
PI F D+ + LG +T ++ S L + L + L
Sbjct: 7 PINQIFTDTALAEKMKTVLGKTNVTDTV--SQTDLDQVTTLQADRLGIKS--IDGVEYLN 62
Query: 414 ELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNN 473
LT ++ S N+L P L N+ LV + + +N+++ + N +
Sbjct: 63 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITD 120
Query: 474 LFDGGLPRSLGNLSYLTNLDLHENKFTGEI--------------PPDLGNLMQLEYLDVS 519
+ +L L +N + +G L NL LE LD+S
Sbjct: 121 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDIS 180
Query: 520 RNRLCGQIPETMCSLSNLLYL 540
N++ + L+NL L
Sbjct: 181 SNKVSD--ISVLAKLTNLESL 199
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 44.7 bits (104), Expect = 1e-05
Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 36/192 (18%)
Query: 207 NLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSH 266
L+ L + D +TTL + + + + L L + S+
Sbjct: 16 ALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSN 71
Query: 267 NNLSGPIPSKPSSYFR----------------------------QANMPDLSFIQHHGVF 298
N L+ P K + +
Sbjct: 72 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 131
Query: 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIP 358
L + + L + L ++N ++ P L+ LT L LD+S N+++
Sbjct: 132 RLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSD--I 187
Query: 359 SEFGDSIKLQGL 370
S L+ L
Sbjct: 188 SVLAKLTNLESL 199
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 41.2 bits (95), Expect = 2e-04
Identities = 32/190 (16%), Positives = 52/190 (27%), Gaps = 20/190 (10%)
Query: 340 LTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGN 399
L L + +T + D ++ L + SI + L L ++N + N
Sbjct: 17 LAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNN 72
Query: 400 KLSGKVPTS-------------FGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQH 446
+L+ P + L L
Sbjct: 73 QLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNR 132
Query: 447 NKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPD 506
+LS S + ++ L L NL+ L LD+ NK +
Sbjct: 133 LELSSNTISDISALSGLTSLQQLNFSSNQVTDLK-PLANLTTLERLDISSNKVSD--ISV 189
Query: 507 LGNLMQLEYL 516
L L LE L
Sbjct: 190 LAKLTNLESL 199
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 959 | |||
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.96 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.96 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.96 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.96 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.94 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.94 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.91 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.91 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.91 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.88 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.84 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.84 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.82 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.77 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.76 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.76 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.75 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.75 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.72 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.71 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.7 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.7 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.69 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.68 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.68 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.51 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.49 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.49 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.48 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.48 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.47 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.42 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.42 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.39 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.3 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.28 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.26 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.44 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.44 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.37 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.82 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.65 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.4 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.33 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 97.03 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 96.86 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.43 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.26 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 96.07 |
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-49 Score=419.15 Aligned_cols=256 Identities=27% Similarity=0.445 Sum_probs=201.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
++|++.+.||+|+||.||+|++.+++.||||+++... ...++|.+|++++++++|||||+++|+|..++..++||||++
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~ 83 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 83 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence 4688899999999999999999888999999997543 335679999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+|+|.+++.... ..+++..+..++.||++||+|+| +.+|+||||||+||++++++.+||+|||+++........
T Consensus 84 ~g~L~~~l~~~~---~~~~~~~~~~i~~qia~gl~~lH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~ 157 (263)
T d1sm2a_ 84 HGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 157 (263)
T ss_dssp TCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCTTCSGGGEEECGGGCEEECSCC-----------
T ss_pred CCcHHHHhhccc---cCCCHHHHHHHHHHHHHHHHhhh---ccceeecccchhheeecCCCCeEecccchheeccCCCce
Confidence 999999987654 35889999999999999999999 889999999999999999999999999999877544444
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccC
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (959)
......||+.|+|||++.+..++.++|||||||++|||+|++.|+...... ..+.+.+..+.. ...|
T Consensus 158 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~-------~~~~~~i~~~~~--~~~p---- 224 (263)
T d1sm2a_ 158 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-------SEVVEDISTGFR--LYKP---- 224 (263)
T ss_dssp -------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCH-------HHHHHHHHHTCC--CCCC----
T ss_pred eecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCH-------HHHHHHHHhcCC--CCCc----
Confidence 444567899999999999999999999999999999999965554322111 112223332211 1111
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 919 ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..+...+.+++.+||+.||++||||+||+++|+++.
T Consensus 225 ---~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~ 260 (263)
T d1sm2a_ 225 ---RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIA 260 (263)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---cccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 122346789999999999999999999999999985
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-48 Score=414.88 Aligned_cols=250 Identities=23% Similarity=0.389 Sum_probs=208.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
++|++.+.||+|+||+||+|++. +|+.||||++........+.+.+|++++++++|||||++++++.+++..|+|||||
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~ 99 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence 46999999999999999999864 69999999987665556677999999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++|+|.+++... .+++.++..++.||+.||+||| ++||+||||||+|||++.++++||+|||+|+......
T Consensus 100 ~gg~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~- 170 (293)
T d1yhwa1 100 AGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ- 170 (293)
T ss_dssp TTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-
T ss_pred CCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCcHHHeEECCCCcEeeccchhheeecccc-
Confidence 999999988753 4889999999999999999999 8899999999999999999999999999998765422
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ............ ....
T Consensus 171 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~-------~~~~~~~~~~~~-~~~~----- 237 (293)
T d1yhwa1 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-------LRALYLIATNGT-PELQ----- 237 (293)
T ss_dssp CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHHCS-CCCS-----
T ss_pred ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCH-------HHHHHHHHhCCC-CCCC-----
Confidence 233456799999999999999999999999999999999999999964321 111222222211 1111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+......+.+++.+||+.||++|||++|++++
T Consensus 238 --~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H 270 (293)
T d1yhwa1 238 --NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (293)
T ss_dssp --SGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred --CcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 112234567889999999999999999999863
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-49 Score=415.91 Aligned_cols=260 Identities=29% Similarity=0.463 Sum_probs=203.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||+||+|+++ ..||||+++.. .....+.|.+|++++++++|||||++++++. ++..++|||
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~E 83 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQ 83 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEEe
Confidence 357889999999999999999874 36999998643 3445678999999999999999999999875 456899999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++|+|.+++.... ..+++.++..++.||++||+||| +++||||||||+|||++.++.+||+|||+|+.....
T Consensus 84 y~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~gl~yLH---~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~ 157 (276)
T d1uwha_ 84 WCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 157 (276)
T ss_dssp CCCEEEHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTSSEEECCCCCSCC----
T ss_pred cCCCCCHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHh---cCCEeccccCHHHEEEcCCCCEEEccccceeecccc
Confidence 999999999997654 35899999999999999999999 789999999999999999999999999999876532
Q ss_pred cc-cccccccccccccCCCcCCC---CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 836 ET-HVSTDIAGTFGYIPPEYGQS---GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 836 ~~-~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.. .......||+.|||||++.+ ..|+.++|||||||++|||+||+.||...... ..+...+..+...
T Consensus 158 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~-------~~~~~~~~~~~~~-- 228 (276)
T d1uwha_ 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-------DQIIFMVGRGYLS-- 228 (276)
T ss_dssp --------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-------HHHHHHHHHTSCC--
T ss_pred CCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChH-------HHHHHHHhcCCCC--
Confidence 22 23345679999999998754 35789999999999999999999998643211 1122222222111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
|. .......+...+.+++.+||+.||++||||+||+++|+.++.
T Consensus 229 --p~-~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~ 272 (276)
T d1uwha_ 229 --PD-LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 272 (276)
T ss_dssp --CC-GGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --Cc-chhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 11 111122234568889999999999999999999999998853
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-49 Score=410.69 Aligned_cols=254 Identities=24% Similarity=0.413 Sum_probs=214.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
++|++.++||+|+||+||+|++++++.||||+++.... ..++|.+|+.++++++||||++++|+|.+++..++||||++
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~ 82 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 82 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence 68999999999999999999998888999999876433 35679999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+|++.+++.... ..+++..+++++.|+++|++||| +.||+||||||+||++++++.+||+|||+++........
T Consensus 83 ~g~l~~~~~~~~---~~~~~~~~~~i~~qi~~gl~~LH---~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 156 (258)
T d1k2pa_ 83 NGCLLNYLREMR---HRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 156 (258)
T ss_dssp TEEHHHHHHSGG---GCCCHHHHHHHHHHHHHHHHHHH---HTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCC
T ss_pred CCcHHHhhhccc---cCCcHHHHHHHHHHHHHHHHHHh---hcCcccccccceeEEEcCCCcEEECcchhheeccCCCce
Confidence 999999987654 35788999999999999999999 789999999999999999999999999999876554444
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......||+.|+|||++.+..++.++|||||||++|||+| |+.||..... ..+...+..+.. ...|.
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~--------~~~~~~i~~~~~--~~~p~-- 224 (258)
T d1k2pa_ 157 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN--------SETAEHIAQGLR--LYRPH-- 224 (258)
T ss_dssp CCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCH--------HHHHHHHHTTCC--CCCCT--
T ss_pred eecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCH--------HHHHHHHHhCCC--CCCcc--
Confidence 4445678999999999999999999999999999999998 7889864321 123333333211 11111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
.....+.+++.+||+.||++|||++|++++|.++
T Consensus 225 -----~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di 258 (258)
T d1k2pa_ 225 -----LASEKVYTIMYSCWHEKADERPTFKILLSNILDV 258 (258)
T ss_dssp -----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred -----cccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence 2234688999999999999999999999999764
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.1e-49 Score=419.63 Aligned_cols=259 Identities=26% Similarity=0.392 Sum_probs=214.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||+||+|+++ +++.||||+++... ...+++.+|++++++++|||||+++++|.+++..++||||
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~ 94 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 94 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeec
Confidence 356888899999999999999876 58899999987543 3456799999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++|++.+++.... ...+++..+..++.||++||+||| +.||+||||||+|||+++++.+||+|||+|+......
T Consensus 95 ~~~g~l~~~l~~~~--~~~~~~~~~~~i~~qi~~gL~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~ 169 (287)
T d1opja_ 95 MTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 169 (287)
T ss_dssp CTTCBHHHHHHHSC--TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSS
T ss_pred ccCcchHHHhhhcc--ccchHHHHHHHHHHHHHHHHHHHH---HCCcccCccccCeEEECCCCcEEEccccceeecCCCC
Confidence 99999999997643 246899999999999999999999 7899999999999999999999999999998776544
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
........|++.|+|||++.+..++.++|||||||++|||++|+.||...... ..+.+.+..+.. +..
T Consensus 170 ~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~-------~~~~~~i~~~~~-----~~~ 237 (287)
T d1opja_ 170 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-------SQVYELLEKDYR-----MER 237 (287)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------HHHHHHHHTTCC-----CCC
T ss_pred ceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchH-------HHHHHHHhcCCC-----CCC
Confidence 44444456889999999999999999999999999999999988776443221 122233332211 111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
+..+...+.+++.+||+.||++|||++|+++.|+++..
T Consensus 238 ----~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~ 275 (287)
T d1opja_ 238 ----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275 (287)
T ss_dssp ----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred ----CccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 11233468899999999999999999999999998753
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-48 Score=407.46 Aligned_cols=246 Identities=26% Similarity=0.413 Sum_probs=206.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||+||+|+++ +++.||+|++.... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm 85 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 85 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence 57899999999999999999975 68899999986432 334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
|||++|+|.+++.... .+++..+..++.||++||+||| +.|||||||||+|||++.++.+||+|||+|+....
T Consensus 86 Ey~~~g~L~~~l~~~~----~l~e~~~~~i~~qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~ 158 (263)
T d2j4za1 86 EYAPLGTVYRELQKLS----KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 158 (263)
T ss_dssp ECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCC
T ss_pred eecCCCcHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeeeeeccccceecCCCCEeecccceeeecCC
Confidence 9999999999998754 5899999999999999999999 88999999999999999999999999999976543
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. ......||+.|||||++.+..++.++||||+||++|||++|+.||..... ......+...... .|
T Consensus 159 ~---~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--------~~~~~~i~~~~~~---~p 224 (263)
T d2j4za1 159 S---RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRISRVEFT---FP 224 (263)
T ss_dssp C---CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHTTCCC---CC
T ss_pred C---cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCC---CC
Confidence 2 23345799999999999999999999999999999999999999964321 1122333222110 11
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......+.+++.+||+.||++|||++|++++
T Consensus 225 -------~~~s~~~~~li~~~L~~dp~~R~t~~eil~h 255 (263)
T d2j4za1 225 -------DFVTEGARDLISRLLKHNPSQRPMLREVLEH 255 (263)
T ss_dssp -------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -------ccCCHHHHHHHHHHccCCHhHCcCHHHHHcC
Confidence 1123467889999999999999999999863
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-49 Score=414.36 Aligned_cols=252 Identities=23% Similarity=0.314 Sum_probs=202.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|++.+.||+|+||+||+|+++ +|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..|+||||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy 84 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 84 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence 57899999999999999999875 68999999986543 23345688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++|+|.+++.... .+++.++..++.|+++||+||| +.||+||||||+|||+++++.+||+|||+|+......
T Consensus 85 ~~gg~L~~~l~~~~----~l~e~~~~~i~~qi~~al~ylH---~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~ 157 (271)
T d1nvra_ 85 CSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 157 (271)
T ss_dssp CTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred cCCCcHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHH---HcCCccCcccHHHEEECCCCCEEEccchhheeeccCC
Confidence 99999999986543 6899999999999999999999 8899999999999999999999999999998765332
Q ss_pred -ccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 837 -THVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 837 -~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
.......+||+.|||||++.+..+ +.++||||+||++|||++|++||....... ... .........
T Consensus 158 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~------~~~-~~~~~~~~~----- 225 (271)
T d1nvra_ 158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------QEY-SDWKEKKTY----- 225 (271)
T ss_dssp EECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTS------HHH-HHHHTTCTT-----
T ss_pred ccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHH------HHH-HHHhcCCCC-----
Confidence 223345689999999999888776 578999999999999999999996532221 111 111111110
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..........+.+++.+||+.||++|||++|++++
T Consensus 226 ---~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 260 (271)
T d1nvra_ 226 ---LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 260 (271)
T ss_dssp ---STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00111223467789999999999999999999764
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-49 Score=415.97 Aligned_cols=256 Identities=30% Similarity=0.441 Sum_probs=209.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
++|++.+.||+|+||+||+|++++++.||||+++... ...+.|.+|++++++++|||||++++++.+ +..++||||++
T Consensus 13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~~ 90 (272)
T d1qpca_ 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYME 90 (272)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeCC
Confidence 5788899999999999999999888899999997543 345679999999999999999999998754 56799999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+|+|.+++.... ...+++.++..++.||++||+||| +.+|+||||||+|||+++++.+||+|||+|+........
T Consensus 91 ~g~L~~~~~~~~--~~~l~~~~~~~i~~qi~~gl~~lH---~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~ 165 (272)
T d1qpca_ 91 NGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165 (272)
T ss_dssp TCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred CCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccchhheeeecccceeeccccceEEccCCccc
Confidence 999999876543 235899999999999999999999 889999999999999999999999999999887654444
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccC
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (959)
......||+.|+|||++.++.++.++|||||||++|||+||+.|+...... ..+...+..+. .+..
T Consensus 166 ~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~-------~~~~~~i~~~~-----~~~~-- 231 (272)
T d1qpca_ 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-------PEVIQNLERGY-----RMVR-- 231 (272)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------HHHHHHHHTTC-----CCCC--
T ss_pred cccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHhcC-----CCCC--
Confidence 445567899999999998889999999999999999999976665432211 11223333221 1111
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 919 ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
+..+...+.+++.+||+.||++||||+||++.|+++.
T Consensus 232 --p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~f 268 (272)
T d1qpca_ 232 --PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (272)
T ss_dssp --CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --cccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhh
Confidence 1123346788999999999999999999999999863
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-49 Score=413.24 Aligned_cols=256 Identities=22% Similarity=0.313 Sum_probs=195.1
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceec--CCceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSF--DEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv 753 (959)
++|++.+.||+|+||+||+|+.+ +|+.||||++... .....+.+.+|++++++++|||||++++++.+ ++..|+|
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv 83 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 83 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence 67999999999999999999865 6899999998654 33445678899999999999999999998864 4568999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC--CCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF--TPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
||||++|+|.+++.........+++.+++.++.|++.||+|||+.. ..+|+||||||+|||++.++.+||+|||+|+.
T Consensus 84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~ 163 (269)
T d2java1 84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 163 (269)
T ss_dssp EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence 9999999999999765433456899999999999999999999421 12499999999999999999999999999987
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
..... .......||+.|||||++.+..++.++||||+||++|||+||++||..... ..+...+..+....
T Consensus 164 ~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~--------~~~~~~i~~~~~~~- 233 (269)
T d2java1 164 LNHDT-SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--------KELAGKIREGKFRR- 233 (269)
T ss_dssp C------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTCCCC-
T ss_pred cccCC-CccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCH--------HHHHHHHHcCCCCC-
Confidence 65422 223456799999999999999999999999999999999999999864211 11223333322111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. +......+.+++.+||+.||++|||++|++++
T Consensus 234 ----~----~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h 266 (269)
T d2java1 234 ----I----PYRYSDELNEIITRMLNLKDYHRPSVEEILEN 266 (269)
T ss_dssp ----C----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----C----CcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 1 11233467889999999999999999999864
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-48 Score=412.64 Aligned_cols=252 Identities=23% Similarity=0.356 Sum_probs=206.8
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
+.|++.+.||+|+||+||+|+++ +|+.||||++........+.+.+|++++++++|||||++++++.+++..++|||||
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~ 91 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 91 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence 46888999999999999999975 68999999997766666678899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++|+|.+++.... ..+++.++..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+..... .
T Consensus 92 ~~g~L~~~~~~~~---~~l~e~~~~~i~~qi~~gL~ylH---~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~-~ 164 (288)
T d2jfla1 92 AGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-I 164 (288)
T ss_dssp TTEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHH-H
T ss_pred CCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCEEEeecChhheeECCCCCEEEEechhhhccCCC-c
Confidence 9999999987654 35899999999999999999999 889999999999999999999999999999765432 1
Q ss_pred cccccccccccccCCCcCC-----CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQ-----SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
.......||+.|+|||++. +..|+.++||||+||++|||+||+.||...... +. ...+.........
T Consensus 165 ~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~----~~----~~~i~~~~~~~~~ 236 (288)
T d2jfla1 165 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM----RV----LLKIAKSEPPTLA 236 (288)
T ss_dssp HHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGG----GH----HHHHHHSCCCCCS
T ss_pred ccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHH----HH----HHHHHcCCCCCCC
Confidence 2233567999999999873 456899999999999999999999998653221 11 1122222111111
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+......+.+++.+||+.||++|||++|++++
T Consensus 237 -------~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h 269 (288)
T d2jfla1 237 -------QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH 269 (288)
T ss_dssp -------SGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -------ccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 112234567889999999999999999999873
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.4e-48 Score=416.32 Aligned_cols=256 Identities=25% Similarity=0.418 Sum_probs=198.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CC---CEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DG---KTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~---~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
++|++.++||+|+||+||+|+++ ++ ..||||++... .....+.|.+|++++++++|||||+++|++..++..++|
T Consensus 26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv 105 (299)
T d1jpaa_ 26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII 105 (299)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence 45777889999999999999875 23 25899988653 344556799999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
||||++|+|.+++.... ..+++.++..++.||++||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 106 ~Ey~~~g~L~~~~~~~~---~~l~~~~~~~i~~qia~gl~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~ 179 (299)
T d1jpaa_ 106 TEFMENGSLDSFLRQND---GQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 179 (299)
T ss_dssp EECCTTEEHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEecCCCcceeeecccc---CCCCHHHHHHHHHHHHHHHHHHh---hCCCccCccccceEEECCCCcEEECCcccceEcc
Confidence 99999999999988654 35899999999999999999999 8899999999999999999999999999998765
Q ss_pred cccccc----cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 834 ACETHV----STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 834 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
...... .....||+.|||||.+.++.++.++|||||||++|||+| |+.||...... .+...+..+..
T Consensus 180 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~--------~~~~~i~~~~~ 251 (299)
T d1jpaa_ 180 DDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ--------DVINAIEQDYR 251 (299)
T ss_dssp ----------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTCC
T ss_pred CCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCC
Confidence 322211 122357899999999999999999999999999999998 89998643211 12223332211
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
+. .+.++...+.+++.+||+.||++||||+||++.|+++.
T Consensus 252 -----~~----~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l 291 (299)
T d1jpaa_ 252 -----LP----PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 291 (299)
T ss_dssp -----CC----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -----CC----CCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 11 12223456888999999999999999999999999864
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-48 Score=420.52 Aligned_cols=199 Identities=28% Similarity=0.434 Sum_probs=177.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||+||+|++. +|+.||+|+++... ......+.+|+.++++++|||||+++++|.++++.|+|||
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE 84 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 84 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 578999999999999999999975 68999999987543 3345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT-PHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
|+++|+|.+++.... .+++..+..++.|+++||.||| + .||+||||||+|||++.++++||+|||+|+....
T Consensus 85 y~~gg~L~~~l~~~~----~l~~~~~~~~~~qil~aL~yLH---~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 157 (322)
T d1s9ja_ 85 HMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 157 (322)
T ss_dssp CCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred cCCCCcHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHH---HhCCEEccccCHHHeeECCCCCEEEeeCCCccccCC
Confidence 999999999998754 5899999999999999999999 5 4899999999999999999999999999987643
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 886 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~ 886 (959)
......+||+.|+|||++.+..|+.++||||+||++|||++|+.||...
T Consensus 158 ---~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~ 206 (322)
T d1s9ja_ 158 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 206 (322)
T ss_dssp ---HTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCC
T ss_pred ---CccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 2234568999999999999999999999999999999999999999654
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-48 Score=408.43 Aligned_cols=255 Identities=24% Similarity=0.397 Sum_probs=206.5
Q ss_pred cCCCCCCe-eccCCCeEEEEEEcC---CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 679 NNFCKTNI-IGDGGFGTVYKAALP---DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~-lg~G~~g~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
++|.+.+. ||+|+||+||+|.++ ++..||||+++... ....++|.+|++++++++|||||+++|++.. +..|+|
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lv 86 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV 86 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEE
Confidence 45666664 999999999999764 35579999987543 4456779999999999999999999999864 568999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++|+|.+++.... ..+++.++..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 87 mE~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~gL~ylH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~ 160 (285)
T d1u59a_ 87 MEMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG 160 (285)
T ss_dssp EECCTTEEHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEeCCCCcHHHHhhccc---cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCcCchhheeeccCCceeeccchhhhccc
Confidence 99999999999986543 35899999999999999999999 8899999999999999999999999999998775
Q ss_pred cccccc--cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 834 ACETHV--STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 834 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
...... .....||+.|+|||++.++.++.++|||||||++|||+| |+.||..... .+ +...+..+...
T Consensus 161 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~----~~----~~~~i~~~~~~- 231 (285)
T d1u59a_ 161 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG----PE----VMAFIEQGKRM- 231 (285)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT----HH----HHHHHHTTCCC-
T ss_pred ccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCH----HH----HHHHHHcCCCC-
Confidence 433222 234468999999999998899999999999999999998 8999864321 11 22333333211
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.. +..+...+.+++.+||+.||++||||.+|++.|+.+.
T Consensus 232 ----~~----p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~ 270 (285)
T d1u59a_ 232 ----EC----PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 270 (285)
T ss_dssp ----CC----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----CC----CCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 11 1223356789999999999999999999999998764
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-46 Score=395.82 Aligned_cols=245 Identities=27% Similarity=0.414 Sum_probs=196.2
Q ss_pred CCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceec----CCceEEEE
Q 002155 682 CKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSF----DEEKLLVY 754 (959)
Q Consensus 682 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~ 754 (959)
++.+.||+|+||+||+|++. +++.||+|++... .....+.+.+|++++++++|||||++++++.. +...|+||
T Consensus 12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm 91 (270)
T d1t4ha_ 12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 91 (270)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence 45678999999999999875 6889999998653 33445678999999999999999999999854 34579999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEEC-CCCcEEEcccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH--IIHRDIKASNILLN-EEFEAKVADFGLARL 831 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~-~~~~~kl~Dfg~~~~ 831 (959)
||+++|+|.+++.... .+++.++..++.||++||+||| +++ |+||||||+|||++ +++.+||+|||+|+.
T Consensus 92 E~~~~g~L~~~l~~~~----~~~~~~~~~~~~qi~~gl~yLH---~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~ 164 (270)
T d1t4ha_ 92 ELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 164 (270)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred eCCCCCcHHHHHhccc----cccHHHHHHHHHHHHHHHHHHH---HCCCCEEeCCcChhhceeeCCCCCEEEeecCccee
Confidence 9999999999998754 5889999999999999999999 677 99999999999996 578999999999976
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
... .......||+.|||||++.+ +++.++||||+||++|||++|+.||..... ...+.+.+..+..
T Consensus 165 ~~~---~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~-------~~~~~~~i~~~~~--- 230 (270)
T d1t4ha_ 165 KRA---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIYRRVTSGVK--- 230 (270)
T ss_dssp CCT---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHHHHHTTTCC---
T ss_pred ccC---CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCccc-------HHHHHHHHHcCCC---
Confidence 432 22345689999999998865 699999999999999999999999954211 1122333332211
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+...+. .....+.+++.+||++||++|||++|++++
T Consensus 231 --~~~~~~---~~~~~~~~li~~~l~~dp~~R~s~~ell~H 266 (270)
T d1t4ha_ 231 --PASFDK---VAIPEVKEIIEGCIRQNKDERYSIKDLLNH 266 (270)
T ss_dssp --CGGGGG---CCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --CcccCc---cCCHHHHHHHHHHccCCHhHCcCHHHHhCC
Confidence 111111 122357789999999999999999999864
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-47 Score=405.45 Aligned_cols=257 Identities=26% Similarity=0.432 Sum_probs=201.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCC-----CEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDG-----KTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
+.|+..++||+|+||+||+|.++++ ..||||++.... .....+|.+|++++++++|||||+++|++.+.+..++
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~ 86 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 86 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence 4577789999999999999987532 369999986543 3345578899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+.+|++.+++.... ..+++.++..++.||+.|++||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 87 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~i~~~i~~gl~~lH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~ 160 (283)
T d1mqba_ 87 ITEYMENGALDKFLREKD---GEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 160 (283)
T ss_dssp EEECCTTEEHHHHHHHTT---TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEEecccCcchhhhhccc---ccccHHHHHHHHHHHHHhhhhcc---ccccccCccccceEEECCCCeEEEcccchhhcc
Confidence 999999999999887654 35899999999999999999999 889999999999999999999999999999876
Q ss_pred ccccc--cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 833 SACET--HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 833 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
..... .......||+.|+|||++.++.++.++|||||||++|||++|+.|+...... ..+.+.+..+..
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~-------~~~~~~i~~~~~-- 231 (283)
T d1mqba_ 161 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-------HEVMKAINDGFR-- 231 (283)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTTCC--
T ss_pred cCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH-------HHHHHHHhccCC--
Confidence 43222 2223346899999999999999999999999999999999977765432221 112233332211
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
+. .+.++...+.+++.+||+.||++||||+||++.|+++.
T Consensus 232 ---~~----~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~ 271 (283)
T d1mqba_ 232 ---LP----TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 271 (283)
T ss_dssp ---CC----CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ---CC----CchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHh
Confidence 11 12223456889999999999999999999999998874
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-47 Score=405.78 Aligned_cols=248 Identities=26% Similarity=0.349 Sum_probs=203.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||+||+|+++ +|+.||||++... .....+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 57999999999999999999875 6899999998643 2334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||++++++.+||+|||+|+....
T Consensus 88 Ey~~gg~L~~~~~~~~----~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~ 160 (288)
T d1uu3a_ 88 SYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 160 (288)
T ss_dssp CCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EccCCCCHHHhhhccC----CCCHHHHHHHHHHHHHHHHhhc---cccEEcCcCCccccccCCCceEEecccccceeccc
Confidence 9999999999988765 5899999999999999999999 89999999999999999999999999999987653
Q ss_pred ccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..+...+...... .
T Consensus 161 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--------~~~~~~i~~~~~~---~ 229 (288)
T d1uu3a_ 161 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--------YLIFQKIIKLEYD---F 229 (288)
T ss_dssp ---------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHTTCCC---C
T ss_pred CCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCH--------HHHHHHHHcCCCC---C
Confidence 322 223456799999999999999999999999999999999999999964311 1122333222110 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
| ......+.+++.+||+.||++|||++|++.
T Consensus 230 p-------~~~s~~~~~li~~~L~~dP~~R~t~~e~~~ 260 (288)
T d1uu3a_ 230 P-------EKFFPKARDLVEKLLVLDATKRLGCEEMEG 260 (288)
T ss_dssp C-------TTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred C-------ccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence 1 122346788999999999999999998643
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.3e-47 Score=407.31 Aligned_cols=252 Identities=23% Similarity=0.319 Sum_probs=191.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.+.|++.+.||+|+||+||+|+++ +|+.||||++.... ......+.+|+.++++++|||||++++++.+++..|+|||
T Consensus 8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE 87 (307)
T d1a06a_ 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ 87 (307)
T ss_dssp GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 467999999999999999999875 68999999987543 2234557789999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC---CCCcEEEccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN---EEFEAKVADFGLARLI 832 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~~~~~ 832 (959)
||+||+|.+++.... .+++.++..++.||+.||+||| +.||+||||||+||++. +++.+||+|||+|+..
T Consensus 88 ~~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~ 160 (307)
T d1a06a_ 88 LVSGGELFDRIVEKG----FYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 160 (307)
T ss_dssp CCCSCBHHHHHHTCS----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCC------
T ss_pred ccCCCcHHHhhhccc----CCCHHHHHHHHHHHHHHHHhhh---hceeeeEEecccceeecccCCCceEEEeccceeEEc
Confidence 999999999997643 5899999999999999999999 88999999999999994 5789999999999866
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
... ......+||+.|||||++.+..|+.++||||+||++|||++|++||...... .....+...... .
T Consensus 161 ~~~--~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~--------~~~~~i~~~~~~--~ 228 (307)
T d1a06a_ 161 DPG--SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA--------KLFEQILKAEYE--F 228 (307)
T ss_dssp --------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHTTCCC--C
T ss_pred cCC--CeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHH--------HHHHHHhccCCC--C
Confidence 432 2234467999999999999999999999999999999999999999643211 122222222111 1
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. .+........+.+++.+||+.||++|||++|++++
T Consensus 229 ~----~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 229 D----SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp C----TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred C----CccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 1 11112234567889999999999999999999874
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-47 Score=403.06 Aligned_cols=248 Identities=26% Similarity=0.373 Sum_probs=199.1
Q ss_pred CeeccCCCeEEEEEEcC---CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALP---DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
++||+|+||+||+|.++ .++.||||+++.. .....+++.+|++++++++|||||+++++|.. +..++||||+++
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~ 91 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 91 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence 46999999999999864 3568999998643 23345679999999999999999999999864 567899999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
|+|.++++... .+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+|++|||+++.........
T Consensus 92 g~L~~~l~~~~----~l~~~~~~~i~~qi~~gl~ylH---~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 164 (277)
T d1xbba_ 92 GPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 164 (277)
T ss_dssp EEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE
T ss_pred CcHHHHHhhcc----CCCHHHHHHHHHHHHHHHhhHH---hCCcccCCCcchhhcccccCcccccchhhhhhcccccccc
Confidence 99999998654 5899999999999999999999 7899999999999999999999999999998765432222
Q ss_pred --cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 840 --STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 840 --~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.....||+.|+|||.+.+..++.++|||||||++|||+| |+.||..... ..+...+..+... ..
T Consensus 165 ~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~--------~~~~~~i~~~~~~-----~~ 231 (277)
T d1xbba_ 165 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--------SEVTAMLEKGERM-----GC 231 (277)
T ss_dssp EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHHTTCCC-----CC
T ss_pred ccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCH--------HHHHHHHHcCCCC-----CC
Confidence 223468999999999998999999999999999999998 8999864211 1223333332211 11
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
+..+...+.+++.+||+.||++|||+++|++.|+...
T Consensus 232 ----p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 268 (277)
T d1xbba_ 232 ----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 268 (277)
T ss_dssp ----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ----CcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHH
Confidence 1123356788999999999999999999999988764
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-47 Score=403.75 Aligned_cols=256 Identities=30% Similarity=0.467 Sum_probs=203.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
++|++.+.||+|+||+||+|++++++.||||++.... ...+.|.+|+.++++++|||||++++++. ++..++||||++
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~ 94 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS 94 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEecC
Confidence 5788999999999999999999888899999997543 34567999999999999999999999985 456899999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+|++..++..... ..++|.++..++.||+.|++||| +.||+||||||+|||++.++.+||+|||+++........
T Consensus 95 ~g~l~~~~~~~~~--~~l~~~~~~~i~~~i~~gl~~LH---~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~ 169 (285)
T d1fmka3 95 KGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 169 (285)
T ss_dssp TCBHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred CCchhhhhhhccc--ccchHHHHHHHHHHHHHHHHHHh---hhheecccccceEEEECCCCcEEEcccchhhhccCCCce
Confidence 9999998876432 35899999999999999999999 789999999999999999999999999999876544444
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccC
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (959)
......||+.|+|||++.++.++.++|||||||++|||++|+.|+...... ..+...+..+.. +..
T Consensus 170 ~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~-------~~~~~~i~~~~~-----~~~-- 235 (285)
T d1fmka3 170 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-------REVLDQVERGYR-----MPC-- 235 (285)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------HHHHHHHHTTCC-----CCC--
T ss_pred eeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH-------HHHHHHHHhcCC-----CCC--
Confidence 444567899999999999999999999999999999999977776443221 112233332211 111
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 919 ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
...+...+.+++.+||+.||++||++++|++.|++..
T Consensus 236 --~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~ 272 (285)
T d1fmka3 236 --PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 272 (285)
T ss_dssp --CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred --CcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhh
Confidence 1223346889999999999999999999999998754
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=2.1e-46 Score=408.93 Aligned_cols=253 Identities=22% Similarity=0.340 Sum_probs=209.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
-++|++.+.||+|+||+||+|+++ +|+.||||++........+.+.+|+.++++++|||||++++++.+++..|+||||
T Consensus 25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 104 (350)
T d1koaa2 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 104 (350)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 357999999999999999999875 6899999999876666677889999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC--CCcEEEccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE--EFEAKVADFGLARLISA 834 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~~~~ 834 (959)
|+||+|.+++.... ..+++.++..++.||+.||+||| +.|||||||||+|||++. ++.+||+|||+++....
T Consensus 105 ~~gg~L~~~l~~~~---~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~ 178 (350)
T d1koaa2 105 MSGGELFEKVADEH---NKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 178 (350)
T ss_dssp CCSCBHHHHHTCTT---SCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCT
T ss_pred CCCCCHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH---hcCCeeeeechhHeeeccCCCCeEEEeecchheeccc
Confidence 99999999996543 35899999999999999999999 899999999999999964 57899999999987653
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. .......||+.|||||++.+..++.++||||+||++|||++|+.||..... .+ ....+...... ..+
T Consensus 179 ~--~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-------~~-~~~~i~~~~~~--~~~ 246 (350)
T d1koaa2 179 K--QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND-------DE-TLRNVKSCDWN--MDD 246 (350)
T ss_dssp T--SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HH-HHHHHHHTCCC--SCC
T ss_pred c--cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCH-------HH-HHHHHHhCCCC--CCc
Confidence 2 223446799999999999999999999999999999999999999964321 11 22222222111 011
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. .......+.+++.+||+.||++|||++|++++
T Consensus 247 ~~----~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 247 SA----FSGISEDGKDFIRKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp GG----GGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred cc----ccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11 11223467889999999999999999999885
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-47 Score=411.29 Aligned_cols=257 Identities=27% Similarity=0.449 Sum_probs=204.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCC------CCEEEEEEcccc-chhhHHHHHHHHHHHhcC-CCCceeccccceecCCce
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPD------GKTVAVKKLSQA-KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 750 (959)
++|++.++||+|+||+||+|++.. ...||||++... .......+.+|+.+++++ +|||||++++++.+.+..
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 116 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence 578889999999999999998642 236999988643 334456788999999998 899999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCC-------------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCC
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGS-------------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKAS 811 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~-------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~ 811 (959)
++|||||++|+|.++++..... ...+++..++.++.||++||+||| +++||||||||+
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH---~~~IiHRDlKp~ 193 (325)
T d1rjba_ 117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAAR 193 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSGG
T ss_pred EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCchh
Confidence 9999999999999999765421 235889999999999999999999 889999999999
Q ss_pred CEEECCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCcc
Q 002155 812 NILLNEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKD 889 (959)
Q Consensus 812 Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~ 889 (959)
||+++.++.+||+|||+|+........ ......||+.|||||++.++.++.++|||||||++|||+| |.+||......
T Consensus 194 Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~ 273 (325)
T d1rjba_ 194 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 273 (325)
T ss_dssp GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred ccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHH
Confidence 999999999999999999876543322 2234568999999999999999999999999999999998 89998643221
Q ss_pred ccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 002155 890 IEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLK 954 (959)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 954 (959)
..+...+..+. .+.. +..+...+.+++.+||+.||++|||++||+++|.
T Consensus 274 -------~~~~~~~~~~~-----~~~~----p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 274 -------ANFYKLIQNGF-----KMDQ----PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp -------HHHHHHHHTTC-----CCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -------HHHHHHHhcCC-----CCCC----CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 11222222221 1111 1123346889999999999999999999999985
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=3e-46 Score=407.96 Aligned_cols=252 Identities=20% Similarity=0.292 Sum_probs=208.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
++|++.+.||+|+||+||+|+.. +|+.||||++..........+.+|++++++++|||||+++++|.+++..|+|||||
T Consensus 29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~ 108 (352)
T d1koba_ 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 108 (352)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 56999999999999999999864 79999999998766556677889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC--CCCcEEEcccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN--EEFEAKVADFGLARLISAC 835 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfg~~~~~~~~ 835 (959)
+||+|.+++.... ..+++.+++.|+.||+.||+||| +.||+||||||+|||++ .++.+||+|||+|+.....
T Consensus 109 ~gg~L~~~~~~~~---~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~ 182 (352)
T d1koba_ 109 SGGELFDRIAAED---YKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 182 (352)
T ss_dssp CCCBHHHHTTCTT---CCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred CCChHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccccccccccccCCCeEEEeecccceecCCC
Confidence 9999998876543 35899999999999999999999 89999999999999997 5689999999999877542
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
.......||+.|+|||++.+..++.++||||+||++|||+||+.||..... .. ....+...... ..+
T Consensus 183 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-------~~-~~~~i~~~~~~--~~~- 249 (352)
T d1koba_ 183 --EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-------LE-TLQNVKRCDWE--FDE- 249 (352)
T ss_dssp --SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-------HH-HHHHHHHCCCC--CCS-
T ss_pred --CceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-------HH-HHHHHHhCCCC--CCc-
Confidence 223345789999999999999999999999999999999999999964321 11 12222222111 011
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.........+.+++.+||+.||++|||++|++++
T Consensus 250 ---~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 250 ---DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp ---STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ---ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1112233467889999999999999999999874
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.3e-46 Score=401.64 Aligned_cols=245 Identities=29% Similarity=0.435 Sum_probs=199.8
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
+.|+..+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~ 94 (309)
T d1u5ra_ 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (309)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence 35888999999999999999864 68899999986543 233456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
|||++|++..++.... .+++.+++.++.||+.||+||| +.|||||||||+|||++.++.+||+|||+|+....
T Consensus 95 E~~~~g~l~~~~~~~~----~l~e~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~ 167 (309)
T d1u5ra_ 95 EYCLGSASDLLEVHKK----PLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (309)
T ss_dssp ECCSEEHHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCCCchHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEECCCCCEEEeecccccccCC
Confidence 9999999987766543 5899999999999999999999 88999999999999999999999999999986542
Q ss_pred ccccccccccccccccCCCcCCC---CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQS---GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.....||+.|||||++.+ +.|+.++||||+||++|||++|..||..... ........ ....
T Consensus 168 -----~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~-------~~~~~~i~-~~~~--- 231 (309)
T d1u5ra_ 168 -----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------MSALYHIA-QNES--- 231 (309)
T ss_dssp -----BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHH-HSCC---
T ss_pred -----CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCH-------HHHHHHHH-hCCC---
Confidence 234579999999998753 4689999999999999999999999864211 11122222 1111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
+...+ ......+.+++.+||+.||++|||++|+++
T Consensus 232 --~~~~~---~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 232 --PALQS---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp --CCCSC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --CCCCC---CCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence 11111 122346788999999999999999999976
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-46 Score=394.58 Aligned_cols=250 Identities=30% Similarity=0.463 Sum_probs=197.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceec-CCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF-DEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~ 757 (959)
++|++.++||+|+||.||+|+++ |+.||||+++... ..+.+.+|++++++++||||++++|+|.+ ++..++||||+
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~ 83 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 83 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred HHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEecc
Confidence 56788899999999999999984 7899999997543 34678999999999999999999998855 46689999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++|+|.+++.... ...+++..+++|+.||+.|++||| +.+|+||||||+||+++.++.+|++|||+++.....
T Consensus 84 ~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~al~ylH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~-- 156 (262)
T d1byga_ 84 AKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 156 (262)
T ss_dssp TTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred CCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHhhccccc---cCceeccccchHhheecCCCCEeecccccceecCCC--
Confidence 9999999997643 235899999999999999999999 789999999999999999999999999999865432
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.....++..|+|||++.++.++.++|||||||++|||+| |++||... ...++.. .+..+. .+..
T Consensus 157 --~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~----~~~~~~~----~i~~~~-----~~~~ 221 (262)
T d1byga_ 157 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI----PLKDVVP----RVEKGY-----KMDA 221 (262)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS----CGGGHHH----HHTTTC-----CCCC
T ss_pred --CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCC----CHHHHHH----HHHcCC-----CCCC
Confidence 223467889999999998999999999999999999998 67776432 1122222 222221 1111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
+......+.+++.+||+.||++||||.|++++|++++
T Consensus 222 ----~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~ 258 (262)
T d1byga_ 222 ----PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 258 (262)
T ss_dssp ----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----CccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 1123346789999999999999999999999999986
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-45 Score=400.05 Aligned_cols=249 Identities=22% Similarity=0.316 Sum_probs=207.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.+.||+|+||+||+|+.+ +|+.||||++.+. .....+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence 367999999999999999999974 7999999998754 233456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||++||+|.+++.... .+++..++.++.|++.||+||| ++||+||||||+|||++.+|++||+|||+|+...
T Consensus 84 ~ey~~gg~L~~~~~~~~----~~~e~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~ 156 (337)
T d1o6la_ 84 MEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred eeccCCCchhhhhhccc----CCcHHHHHHHHHHHhhhhhhhh---hcCccccccCHHHeEecCCCCEEEeecccccccc
Confidence 99999999999998765 5888999999999999999999 8999999999999999999999999999998654
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.. .......+||+.|+|||++.+..|+.++||||+||++|||++|++||..... ..+.+.+...... .
T Consensus 157 ~~-~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~--------~~~~~~i~~~~~~---~ 224 (337)
T d1o6la_ 157 SD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------ERLFELILMEEIR---F 224 (337)
T ss_dssp CT-TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCC---C
T ss_pred cC-CcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCH--------HHHHHHHhcCCCC---C
Confidence 32 2233456899999999999999999999999999999999999999865321 1122233222111 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT-----MLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~ell~~ 952 (959)
| ......+.+++.+||++||++||+ ++|++++
T Consensus 225 p-------~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H 261 (337)
T d1o6la_ 225 P-------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp C-------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred C-------ccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence 1 122345778999999999999995 8888764
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-46 Score=398.93 Aligned_cols=255 Identities=23% Similarity=0.366 Sum_probs=197.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCC----CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPD----GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
++|++.+.||+|+||.||+|++.. +..||||+++... ....+.+.+|++++++++|||||++++++. ++..++|
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv 85 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 85 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEE
Confidence 578889999999999999998642 3568999886543 334567899999999999999999999986 5678999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++|++.+++.... ..+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+|+...
T Consensus 86 ~E~~~~g~l~~~~~~~~---~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~ 159 (273)
T d1mp8a_ 86 MELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 159 (273)
T ss_dssp EECCTTEEHHHHHHHTT---TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEeccCCcHHhhhhccC---CCCCHHHHHHHHHHHHHHhhhhc---ccCeeccccchhheeecCCCcEEEccchhheecc
Confidence 99999999999887654 35899999999999999999999 8999999999999999999999999999998765
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
...........||+.|+|||++.+..++.++|||||||++|||+| |.+||...... ++ ...+..+...
T Consensus 160 ~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~----~~----~~~i~~~~~~--- 228 (273)
T d1mp8a_ 160 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DV----IGRIENGERL--- 228 (273)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GH----HHHHHTTCCC---
T ss_pred CCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHH----HH----HHHHHcCCCC---
Confidence 444444455578999999999999999999999999999999998 78888653221 22 2233332211
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.. +..+...+.+++.+||+.||++|||++||+++|+++.
T Consensus 229 --~~----~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~ 267 (273)
T d1mp8a_ 229 --PM----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 267 (273)
T ss_dssp --CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CC----CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 11 1123356889999999999999999999999999874
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-45 Score=394.95 Aligned_cols=252 Identities=22% Similarity=0.314 Sum_probs=205.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc------hhhHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK------TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||+||+|+++ +|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..
T Consensus 9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~ 88 (293)
T d1jksa_ 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 88 (293)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 367999999999999999999975 68999999986432 22356789999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC----cEEEccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF----EAKVADF 826 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Df 826 (959)
|+|||||++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+|++||
T Consensus 89 ~iv~E~~~gg~L~~~i~~~~----~l~~~~~~~~~~qi~~al~yLH---~~~ivHrDiKp~Nill~~~~~~~~~vkl~Df 161 (293)
T d1jksa_ 89 ILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 161 (293)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEcCCCccccchhcccc----ccchhHHHHHHHHHHHHHHhhh---hcceeecccccceEEEecCCCcccceEecch
Confidence 99999999999999998764 5899999999999999999999 89999999999999998776 5999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
|+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... + ....+...
T Consensus 162 G~a~~~~~~--~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~-------~-~~~~i~~~ 231 (293)
T d1jksa_ 162 GLAHKIDFG--NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-------E-TLANVSAV 231 (293)
T ss_dssp TTCEECTTS--CBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------H-HHHHHHTT
T ss_pred hhhhhcCCC--ccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHH-------H-HHHHHHhc
Confidence 999876532 2234457899999999999999999999999999999999999999653211 1 12222222
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... ..+.... .....+.+++.+||+.||++|||++|++++
T Consensus 232 ~~~--~~~~~~~----~~s~~~~~li~~~L~~dP~~R~s~~eil~h 271 (293)
T d1jksa_ 232 NYE--FEDEYFS----NTSALAKDFIRRLLVKDPKKRMTIQDSLQH 271 (293)
T ss_dssp CCC--CCHHHHT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCC--CCchhcC----CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 110 0000111 123457789999999999999999999874
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.7e-45 Score=393.12 Aligned_cols=245 Identities=23% Similarity=0.341 Sum_probs=205.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||+||+|+++ +|+.||||++... .....+.+.+|+.+++.++|||||++++++.+++..|+||
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 83 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence 57999999999999999999975 6899999998643 2334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||++||++..++.... .+++..+..++.||+.|++||| ++||+||||||+|||++.++++||+|||+|+....
T Consensus 84 E~~~gg~l~~~~~~~~----~~~~~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~ 156 (316)
T d1fota_ 84 DYIEGGELFSLLRKSQ----RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 156 (316)
T ss_dssp CCCCSCBHHHHHHHTS----SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred eecCCccccccccccc----cccccHHHHHHHHHHHhhhhhc---cCcEEccccCchheeEcCCCCEEEecCccceEecc
Confidence 9999999999988765 4778889999999999999999 89999999999999999999999999999987643
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... .. +...+...... .|
T Consensus 157 ----~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~-------~~-~~~~i~~~~~~---~p 221 (316)
T d1fota_ 157 ----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-------MK-TYEKILNAELR---FP 221 (316)
T ss_dssp ----CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-------HH-HHHHHHHCCCC---CC
T ss_pred ----ccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCH-------HH-HHHHHHcCCCC---CC
Confidence 22346899999999999999999999999999999999999999964321 11 22222222110 11
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
......+.+++.+||++||++|+ |++|++++
T Consensus 222 -------~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 222 -------PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp -------TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred -------CCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence 11234577899999999999996 89999874
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.7e-45 Score=395.87 Aligned_cols=261 Identities=29% Similarity=0.472 Sum_probs=210.1
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
..++|++.+.||+|+||+||+|+++ +++.||||++.... ....++|.+|++++++++||||++++++|..++.
T Consensus 11 p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~ 90 (301)
T d1lufa_ 11 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 90 (301)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred CHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCc
Confidence 3578999999999999999999863 35789999987543 3345679999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcC--------------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCC
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTG--------------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIK 809 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk 809 (959)
.++||||+++|+|.++++.... ....+++..+..++.|++.||+||| +.++||||||
T Consensus 91 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH---~~~ivHrDlK 167 (301)
T d1lufa_ 91 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLA 167 (301)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred eEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcc---cCCeEeeEEc
Confidence 9999999999999999975431 1234789999999999999999999 8999999999
Q ss_pred CCCEEECCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCC-CCCCCCC
Q 002155 810 ASNILLNEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK-EPTGPEF 887 (959)
Q Consensus 810 ~~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~-~p~~~~~ 887 (959)
|+|||++.++.+||+|||+|+........ ......|++.|+|||.+.+..++.++|||||||++|||++|. +||....
T Consensus 168 p~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~ 247 (301)
T d1lufa_ 168 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 247 (301)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred ccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCC
Confidence 99999999999999999999866433222 223456889999999999999999999999999999999986 4554321
Q ss_pred ccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 888 KDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.. + +...+..+... .. +..++..+.+++.+||+.||++||||.||++.|++|.
T Consensus 248 ~~----e----~~~~v~~~~~~-----~~----p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 248 HE----E----VIYYVRDGNIL-----AC----PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp HH----H----HHHHHHTTCCC-----CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred HH----H----HHHHHHcCCCC-----CC----CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 11 1 22333333211 11 1223346889999999999999999999999999874
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-45 Score=393.62 Aligned_cols=269 Identities=27% Similarity=0.344 Sum_probs=202.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCC----ceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE----EKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv~ 754 (959)
.+|...+.||+|+||.||+|++ +|+.||||+++..... ......|+..+++++||||+++++++..++ ..|+||
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~~~-~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~ 80 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-HHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence 3566778999999999999997 5899999998643322 222334666667789999999999997654 578999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG-----FTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
||+++|+|.++++.. .++|.+++.++.|++.|++|+|+. .++|||||||||+|||++.++.+||+|||++
T Consensus 81 Ey~~~g~L~~~l~~~-----~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~ 155 (303)
T d1vjya_ 81 DYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp ECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred ecccCCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcc
Confidence 999999999999864 389999999999999999999942 1369999999999999999999999999999
Q ss_pred ccccccccc---ccccccccccccCCCcCCCCC------CCCcCcchhHHHHHHHHHhCCCCCCCCCccccC-------C
Q 002155 830 RLISACETH---VSTDIAGTFGYIPPEYGQSGR------STTRGDVYSFGVILLELVTGKEPTGPEFKDIEG-------G 893 (959)
Q Consensus 830 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwslG~il~elltg~~p~~~~~~~~~~-------~ 893 (959)
+........ ......||+.|+|||++.+.. ++.++|||||||++|||+||..||......... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~ 235 (303)
T d1vjya_ 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhccccc
Confidence 876543222 223457999999999876543 577899999999999999999887543221110 1
Q ss_pred chHHHHHHHhhcCccccccCccccCC-CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 894 NLVGWVFQKMKKGQAADVLDPTVLTA-DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
............ ...+|..... ...+....+.+++.+||+.||++||||.||++.|+++..
T Consensus 236 ~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~ 297 (303)
T d1vjya_ 236 PSVEEMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CCHHHHHHHHTT----SCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhc----cccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 111222222221 1222222111 133466778999999999999999999999999999864
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=8.5e-45 Score=385.88 Aligned_cols=259 Identities=25% Similarity=0.362 Sum_probs=203.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCC----c
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE----E 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~ 749 (959)
.++|++.+.||+|+||+||+|++. +|+.||||+++... ......+.+|+++++.++||||+++++++...+ .
T Consensus 6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~ 85 (277)
T d1o6ya_ 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 85 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence 467999999999999999999864 78999999987542 333456889999999999999999999987654 3
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.|+||||++||+|.+++.... .+++.++..++.||+.||+||| +.||+||||||+||+++.++.++++|||.+
T Consensus 86 ~~lvmE~~~g~~L~~~~~~~~----~l~~~~~~~i~~qi~~al~~lH---~~~iiHrDiKP~NIll~~~~~~~l~d~~~~ 158 (277)
T d1o6ya_ 86 PYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIA 158 (277)
T ss_dssp EEEEEECCCEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTSCEEECCCTTC
T ss_pred EEEEEECCCCCEehhhhcccC----CCCHHHHHHHHHHHHHHHHHHH---hCCccCccccCcccccCccccceeehhhhh
Confidence 789999999999999987764 5899999999999999999999 899999999999999999999999999998
Q ss_pred cccccccc--cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 830 RLISACET--HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 830 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
........ .......||+.|+|||++.+..++.++||||+||++|||+||++||.... ..+.....+....
T Consensus 159 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-------~~~~~~~~~~~~~ 231 (277)
T d1o6ya_ 159 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS-------PVSVAYQHVREDP 231 (277)
T ss_dssp EECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-------HHHHHHHHHHCCC
T ss_pred hhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcC-------HHHHHHHHHhcCC
Confidence 76533221 22344579999999999999999999999999999999999999996431 1222233333221
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhhh
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-TMLHVLKFLKEIK 957 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~ell~~L~~l~ 957 (959)
.. +... .......+.+++.+||++||++|| |++++++.|.+++
T Consensus 232 ~~----~~~~---~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 232 IP----PSAR---HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp CC----GGGT---SSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred CC----Cchh---ccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence 11 1111 112334678899999999999999 8999999998875
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-45 Score=399.16 Aligned_cols=255 Identities=25% Similarity=0.426 Sum_probs=201.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCC----EEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGK----TVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
++|++.++||+|+||+||+|++. +|+ +||+|++... .....+++.+|++++++++|||||+++|+|.+ +..++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-~~~~~ 87 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQL 87 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCeeE
Confidence 46889999999999999999865 343 6889988643 34456789999999999999999999999976 46788
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
+|||+.+|+|.+++.... ..+++..+..++.||++||+||| +++||||||||+||+++.++.+||+|||+++..
T Consensus 88 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~i~~qi~~gl~yLH---~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~ 161 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 161 (317)
T ss_dssp EEECCTTCBHHHHHHHTS---SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCCSHHHHT
T ss_pred EEEeccCCcccccccccc---cCCCHHHHHHHHHHHHHHHHHHH---HcCcccCcchhhcceeCCCCCeEeeccccceec
Confidence 899999999999887754 46899999999999999999999 789999999999999999999999999999876
Q ss_pred ccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 833 SACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 833 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
....... .....||+.|+|||++.++.++.++|||||||++|||+| |.+||..... ..+ ...+..+..
T Consensus 162 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~----~~~----~~~i~~~~~-- 231 (317)
T d1xkka_ 162 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA----SEI----SSILEKGER-- 231 (317)
T ss_dssp TTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCG----GGH----HHHHHHTCC--
T ss_pred ccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCH----HHH----HHHHHcCCC--
Confidence 5433222 233468999999999999999999999999999999999 7788754321 122 222322211
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
+. .+..+...+.+++.+||+.||++|||+.|++++|+++.
T Consensus 232 ---~~----~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~ 271 (317)
T d1xkka_ 232 ---LP----QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 271 (317)
T ss_dssp ---CC----CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CC----CCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence 11 11223346788999999999999999999999998874
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=6.9e-45 Score=383.96 Aligned_cols=251 Identities=24% Similarity=0.318 Sum_probs=204.5
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch---------hhHHHHHHHHHHHhcCC-CCceeccccceecC
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT---------QGHREFTAEMETLGKVK-HQNLVPLLGYCSFD 747 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---------~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~ 747 (959)
++|++.+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|+.++++++ ||||+++++++.++
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 82 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 82 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence 57899999999999999999874 789999999864321 12345778999999997 99999999999999
Q ss_pred CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccc
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFG 827 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 827 (959)
+..|+||||+++|+|.++++... .+++.++..++.||+.||+||| +.||+||||||+||+++.++.+||+|||
T Consensus 83 ~~~~ivmE~~~~g~L~~~l~~~~----~l~e~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~~kl~DFG 155 (277)
T d1phka_ 83 TFFFLVFDLMKKGELFDYLTEKV----TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG 155 (277)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred cceEEEEEcCCCchHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HcCCcccccccceEEEcCCCCeEEccch
Confidence 99999999999999999998754 5899999999999999999999 8899999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcCC------CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHH
Q 002155 828 LARLISACETHVSTDIAGTFGYIPPEYGQ------SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
+++..... .......||+.|+|||.+. ...++.++||||+||++|||++|+.||..... .....
T Consensus 156 ~a~~~~~~--~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~--------~~~~~ 225 (277)
T d1phka_ 156 FSCQLDPG--EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--------MLMLR 225 (277)
T ss_dssp TCEECCTT--CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHH
T ss_pred heeEccCC--CceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCH--------HHHHH
Confidence 99876542 2234567999999999764 34578899999999999999999999965321 11222
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+..+... . ...........+.+++.+||++||++|||++|++++
T Consensus 226 ~i~~~~~~-~-----~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 226 MIMSGNYQ-F-----GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp HHHHTCCC-C-----CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHhCCCC-C-----CCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 22222111 0 111122344568899999999999999999999875
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-45 Score=389.91 Aligned_cols=256 Identities=27% Similarity=0.393 Sum_probs=196.5
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC--CC--CEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP--DG--KTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~--~~--~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
++|++.+.||+|+||.||+|++. ++ ..||||++... .....++|.+|+.++++++||||++++|+|.+ ...+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~ 86 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK 86 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence 56889999999999999999853 22 37899988653 23345678999999999999999999999965 5678
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||+++|++.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 87 lv~e~~~~~~l~~~~~~~~---~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~ 160 (273)
T d1u46a_ 87 MVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 160 (273)
T ss_dssp EEEECCTTCBHHHHHHHHG---GGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeeeecCcchhhhhhccc---CCCCHHHHHHHHHHHHHHHHHhh---hCCEeeeeecHHHhccccccceeeccchhhhh
Confidence 9999999999999887654 35899999999999999999999 78999999999999999999999999999987
Q ss_pred cccccccc--cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 832 ISACETHV--STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 832 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
........ .....|+..|+|||++.+..++.++|||||||++|||+| |+.||..... .+......+.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~-------~~~~~~i~~~~~- 232 (273)
T d1u46a_ 161 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-------SQILHKIDKEGE- 232 (273)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTSCC-
T ss_pred cccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCH-------HHHHHHHHhCCC-
Confidence 64432222 223457889999999999999999999999999999998 8999854211 111122222211
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+.. +..+...+.+++.+||+.||++||||+||.+.|++.+
T Consensus 233 ----~~~~----~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~~ 273 (273)
T d1u46a_ 233 ----RLPR----PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 273 (273)
T ss_dssp ----CCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred ----CCCC----cccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcC
Confidence 1111 1223346889999999999999999999999998753
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.6e-45 Score=390.48 Aligned_cols=252 Identities=31% Similarity=0.480 Sum_probs=201.8
Q ss_pred CCeeccCCCeEEEEEEcCCC----CEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceec-CCceEEEEEec
Q 002155 684 TNIIGDGGFGTVYKAALPDG----KTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSF-DEEKLLVYEYM 757 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~----~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~ 757 (959)
.++||+|+||+||+|++.++ ..||||+++.. .....++|.+|++++++++||||++++|++.. ++..++|||||
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~ 111 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 111 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence 57899999999999987532 35899998753 44556789999999999999999999999865 56789999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++|+|.+++.... ...++..+..++.|+++||.|+| +.+|+||||||+|||+++++.+||+|||+++.......
T Consensus 112 ~~g~l~~~~~~~~---~~~~~~~~~~i~~qia~gL~~lH---~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~ 185 (311)
T d1r0pa_ 112 KHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 185 (311)
T ss_dssp TTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTC
T ss_pred ecCchhhhhcccc---ccchHHHHHHHHHHHHHhhhhhc---ccCcccCCccHHhEeECCCCCEEEecccchhhcccccc
Confidence 9999999988654 34678889999999999999999 88999999999999999999999999999987643222
Q ss_pred c---ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 838 H---VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 838 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... .++..++ ..+.. ...|
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~---~~~~~~i----~~g~~--~~~p 256 (311)
T d1r0pa_ 186 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYL----LQGRR--LLQP 256 (311)
T ss_dssp CCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC---------CHHHH----HTTCC--CCCC
T ss_pred ccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH---HHHHHHH----HcCCC--CCCc
Confidence 2 223356899999999999999999999999999999999988887653322 2222222 22211 1111
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..+...+.+++.+||+.||++||+|.||+++|+++.
T Consensus 257 -------~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~ 292 (311)
T d1r0pa_ 257 -------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 292 (311)
T ss_dssp -------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------ccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 122346788999999999999999999999999885
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-45 Score=392.36 Aligned_cols=260 Identities=28% Similarity=0.413 Sum_probs=197.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecC-Cc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFD-EE 749 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-~~ 749 (959)
++|++.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|...+.++ +|+||+++++++..+ ..
T Consensus 13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~ 92 (299)
T d1ywna1 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 92 (299)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCe
Confidence 57889999999999999999853 34689999987533 34455677888877777 689999999987654 56
Q ss_pred eEEEEEeccCCCHHHHHhhhcC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTG------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE 817 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 817 (959)
.++|||||++|+|.++++.... ....+++.++..++.||++||+||| +++||||||||+|||++.
T Consensus 93 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~ivHrDlKp~NILl~~ 169 (299)
T d1ywna1 93 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSE 169 (299)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECG
T ss_pred EEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHH---hCCCcCCcCCccceeECC
Confidence 8999999999999999976532 1235889999999999999999999 889999999999999999
Q ss_pred CCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCC-CCCCCCCccccCCch
Q 002155 818 EFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK-EPTGPEFKDIEGGNL 895 (959)
Q Consensus 818 ~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~-~p~~~~~~~~~~~~~ 895 (959)
++.+||+|||+|+........ ......||+.|+|||++.+..++.++|||||||++|||+||. +||.....
T Consensus 170 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~------- 242 (299)
T d1ywna1 170 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI------- 242 (299)
T ss_dssp GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC-------
T ss_pred CCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCH-------
Confidence 999999999999876543322 234457999999999999999999999999999999999975 46543211
Q ss_pred HHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 896 VGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
...+...+..+.... . +......+.+++.+||+.||++|||++|++++|+++.
T Consensus 243 ~~~~~~~~~~~~~~~-----~----~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il 295 (299)
T d1ywna1 243 DEEFCRRLKEGTRMR-----A----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 295 (299)
T ss_dssp SHHHHHHHHHTCCCC-----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCC-----C----CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 112233333322111 1 1122346789999999999999999999999999873
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-45 Score=396.94 Aligned_cols=258 Identities=30% Similarity=0.469 Sum_probs=204.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCC--EEEEEEcccc-chhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGK--TVAVKKLSQA-KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 753 (959)
++|++.++||+|+||+||+|+++ +|. .||||++... .....+.+.+|+++++++ +|||||+++++|.+++..++|
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV 89 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 89 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence 67888999999999999999875 344 4778887543 334456789999999998 799999999999999999999
Q ss_pred EEeccCCCHHHHHhhhc------------CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcE
Q 002155 754 YEYMVNGSLDLWLRNRT------------GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEA 821 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 821 (959)
|||+++|+|.++++... .....+++..++.++.||+.|+.|+| +.+|+||||||+|||++.++.+
T Consensus 90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH---~~~iiHrDlkp~NIL~~~~~~~ 166 (309)
T d1fvra_ 90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 166 (309)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhh---cCCccccccccceEEEcCCCce
Confidence 99999999999997542 22356899999999999999999999 8899999999999999999999
Q ss_pred EEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCC-CCCCCCccccCCchHHHHH
Q 002155 822 KVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKE-PTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 822 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~-p~~~~~~~~~~~~~~~~~~ 900 (959)
||+|||+++..... .......||..|+|||.+.+..++.++|||||||++|||++|.. ||... . ...+.
T Consensus 167 kl~DfG~a~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~-~-------~~~~~ 236 (309)
T d1fvra_ 167 KIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-T-------CAELY 236 (309)
T ss_dssp EECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-C-------HHHHH
T ss_pred EEcccccccccccc--ccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCC-C-------HHHHH
Confidence 99999999765432 22234468999999999999999999999999999999999765 55332 1 11223
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
..+..+.. +.. +..+...+.+++.+||+.||++||||+||+++|+++..
T Consensus 237 ~~i~~~~~-----~~~----~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 285 (309)
T d1fvra_ 237 EKLPQGYR-----LEK----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 285 (309)
T ss_dssp HHGGGTCC-----CCC----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcCC-----CCC----CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 33333211 111 12234578899999999999999999999999998753
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3e-44 Score=394.42 Aligned_cols=249 Identities=24% Similarity=0.310 Sum_probs=198.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHH---HHHHHHHhcCCCCceeccccceecCCceE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREF---TAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~---~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
++|++.++||+|+||.||+|++. +|+.||||++.... ......+ ..|+++++.++|||||++++++.+++..|
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ 83 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 83 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence 67999999999999999999975 68999999986432 1112223 34577788889999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||+++|+|.+++.... .+++..++.++.||+.||+||| +.|||||||||+|||++.++.+||+|||+|+.
T Consensus 84 ivmE~~~gg~L~~~l~~~~----~~~e~~~~~~~~qi~~aL~ylH---~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~ 156 (364)
T d1omwa3 84 FILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACD 156 (364)
T ss_dssp EEECCCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSSSCEEECCCTTCEE
T ss_pred EEEEecCCCcHHHHHHhcc----cccHHHHHHHHHHHHHHHHHHH---HCCccceeeccceeEEcCCCcEEEeeeceeee
Confidence 9999999999999998754 5788999999999999999999 89999999999999999999999999999987
Q ss_pred cccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
.... ......||+.|+|||++.. ..|+.++||||+||++|||+||+.||...... ... .+....... .
T Consensus 157 ~~~~---~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~----~~~-~~~~~~~~~---~ 225 (364)
T d1omwa3 157 FSKK---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK----DKH-EIDRMTLTM---A 225 (364)
T ss_dssp CSSS---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSS----CHH-HHHHHSSSC---C
T ss_pred cCCC---cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHH----HHH-HHHHhcccC---C
Confidence 6532 2344579999999998864 56899999999999999999999999653221 111 122211111 1
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT-----MLHVLKF 952 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~ell~~ 952 (959)
. .. +......+.+++.+||+.||++||| |+|++++
T Consensus 226 ~---~~----~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H 265 (364)
T d1omwa3 226 V---EL----PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 265 (364)
T ss_dssp C---CC----CSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred C---CC----CCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence 1 01 1122346788999999999999999 7888764
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.9e-44 Score=393.83 Aligned_cols=245 Identities=22% Similarity=0.282 Sum_probs=205.5
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||+||+|+++ +|+.||||++... .....+.+.+|+++++.++|||||++++++......++||
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~ 120 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence 57999999999999999999875 6999999998643 2334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+.+|++.+++.... .+++..+..++.||+.||.||| +.|||||||||+|||++.++.+||+|||+|+....
T Consensus 121 e~~~~g~l~~~l~~~~----~l~e~~~~~i~~qi~~aL~yLH---~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~ 193 (350)
T d1rdqe_ 121 EYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp ECCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred ccccccchhhhHhhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCEecCcCCHHHcccCCCCCEEeeeceeeeeccc
Confidence 9999999999998764 5899999999999999999999 89999999999999999999999999999987643
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. .....||+.|||||++.+..++.++||||+||++|||+||..||..... ......+...... .|
T Consensus 194 ~----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~--------~~~~~~i~~~~~~---~p 258 (350)
T d1rdqe_ 194 R----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--------IQIYEKIVSGKVR---FP 258 (350)
T ss_dssp C----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCC---CC
T ss_pred c----cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCH--------HHHHHHHhcCCCC---CC
Confidence 2 2346799999999999999999999999999999999999999964311 1122223222111 11
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
......+.+++.+||+.||++|+ |++|++++
T Consensus 259 -------~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H 294 (350)
T d1rdqe_ 259 -------SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp -------TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred -------ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcC
Confidence 12334678899999999999994 89999864
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-45 Score=391.72 Aligned_cols=247 Identities=23% Similarity=0.358 Sum_probs=202.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHh-cCCCCceeccccceecCCceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLG-KVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~~~~~~lv 753 (959)
++|++.++||+|+||+||+|+++ +|+.||||++++.. ....+.+..|..++. .++|||||++++++.+++..|+|
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 57999999999999999999875 68999999997532 333455666766655 68999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++|+|.++++... .+++.++..++.||+.||+||| ++||+||||||+|||+++++++||+|||+++...
T Consensus 82 mEy~~~g~L~~~i~~~~----~~~e~~~~~~~~qi~~al~ylH---~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~ 154 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCH----KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM 154 (320)
T ss_dssp EECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EeecCCCcHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCcccceeecCCCceeccccchhhhcc
Confidence 99999999999998765 5788999999999999999999 8899999999999999999999999999998654
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..+...+....
T Consensus 155 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~--------~~~~~~i~~~~------ 219 (320)
T d1xjda_ 155 LG-DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--------EELFHSIRMDN------ 219 (320)
T ss_dssp CT-TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCC------
T ss_pred cc-cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCC------
Confidence 32 2333446799999999999999999999999999999999999999965321 12233333221
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTML-HVLK 951 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~-ell~ 951 (959)
+.. +......+.+++.+||+.||++||++. |+++
T Consensus 220 ~~~----p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~ 254 (320)
T d1xjda_ 220 PFY----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 254 (320)
T ss_dssp CCC----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred CCC----CccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence 111 112234578999999999999999995 6754
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-44 Score=390.86 Aligned_cols=253 Identities=20% Similarity=0.277 Sum_probs=197.6
Q ss_pred hcCCCCC-CeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceec----CCce
Q 002155 678 TNNFCKT-NIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSF----DEEK 750 (959)
Q Consensus 678 ~~~f~~~-~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~----~~~~ 750 (959)
.++|++. ++||+|+||+||+|++ .+++.||||+++.. ..+.+|+.++.++ +|||||+++++|.+ +...
T Consensus 10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~ 84 (335)
T d2ozaa1 10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 84 (335)
T ss_dssp GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence 3578776 4699999999999986 46899999998642 3467899886654 89999999998864 4568
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---CCcEEEcccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE---EFEAKVADFG 827 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg 827 (959)
|+|||||+||+|.+++..... ..+++.+++.++.||+.|++||| +.||+||||||+|||++. ++.+||+|||
T Consensus 85 ~ivmEy~~gg~L~~~i~~~~~--~~l~e~~~~~i~~qi~~al~ylH---~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG 159 (335)
T d2ozaa1 85 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFG 159 (335)
T ss_dssp EEEEECCCSEEHHHHHHSCSC--CCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEEECCCCCcHHHHHHhcCC--CCcCHHHHHHHHHHHHHHHHHHH---HcCCccccccccccccccccccccccccccc
Confidence 999999999999999986432 36899999999999999999999 899999999999999975 4679999999
Q ss_pred cccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 828 LARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
+|+..... .......||+.|+|||++.+..|+.++||||+||++|||+||++||...... .....+...+....
T Consensus 160 ~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~----~~~~~~~~~i~~~~ 233 (335)
T d2ozaa1 160 FAKETTSH--NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----AISPGMKTRIRMGQ 233 (335)
T ss_dssp TCEECCCC--CCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC------------CCCSCS
T ss_pred eeeeccCC--CccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHH----HHHHHHHHHHhcCC
Confidence 99876532 2234567999999999999999999999999999999999999999643221 11111111111111
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ............+.+++.+||+.||++|||+.|++++
T Consensus 234 ----~~--~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 272 (335)
T d2ozaa1 234 ----YE--FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 272 (335)
T ss_dssp ----SS--CCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ----CC--CCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 00 0011122345678899999999999999999999874
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-44 Score=387.44 Aligned_cols=251 Identities=20% Similarity=0.282 Sum_probs=204.5
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
++|++.+.||+|+||+||+|+++ +|+.||||+++.... ....+.+|+++++.++|||||++++++.+++..|+|||||
T Consensus 5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~ 83 (321)
T d1tkia_ 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecC
Confidence 67899999999999999999875 688999999976433 3456789999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC--CcEEEcccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE--FEAKVADFGLARLISAC 835 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfg~~~~~~~~ 835 (959)
+||+|.+++.... ..+++.+++.++.||+.|++||| +.||+||||||+|||++.+ ..+||+|||+++.....
T Consensus 84 ~gg~L~~~i~~~~---~~l~e~~~~~i~~qi~~al~yLH---~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~ 157 (321)
T d1tkia_ 84 SGLDIFERINTSA---FELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp CCCBHHHHHTSSS---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred CCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HcCCCcccccccceeecCCCceEEEEcccchhhccccC
Confidence 9999999997653 35899999999999999999999 8899999999999999854 58999999999876432
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
.......+|+.|+|||...+..++.++||||+||++|||++|.+||...... .+...+...... +...
T Consensus 158 --~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~--------~~~~~i~~~~~~--~~~~ 225 (321)
T d1tkia_ 158 --DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--------QIIENIMNAEYT--FDEE 225 (321)
T ss_dssp --CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCCC--CCHH
T ss_pred --CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCC--CChh
Confidence 2233457899999999999999999999999999999999999999653221 122222222110 0000
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... .....+.+++.+||+.||++|||++|++++
T Consensus 226 ~~~----~~s~~~~~li~~~L~~dp~~R~s~~eil~h 258 (321)
T d1tkia_ 226 AFK----EISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hcc----CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 001 123457889999999999999999999874
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-44 Score=388.85 Aligned_cols=260 Identities=30% Similarity=0.434 Sum_probs=205.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC--------CCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD--------GKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFD 747 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 747 (959)
.++|++.+.||+|+||.||+|+... +..||||+++... .....++.+|...+.++ +|||||+++++|.++
T Consensus 12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~ 91 (299)
T d1fgka_ 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 91 (299)
T ss_dssp GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence 3578889999999999999998532 3479999997644 34456788898888888 899999999999999
Q ss_pred CceEEEEEeccCCCHHHHHhhhcC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTG------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL 815 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 815 (959)
+..++||||+++|+|.++++.... ....+++.+++.++.|++.||+||| +.+||||||||+|||+
T Consensus 92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH---~~~ivHrDiKp~NiLl 168 (299)
T d1fgka_ 92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 168 (299)
T ss_dssp SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhh---hCCEEeeeecccceee
Confidence 999999999999999999976542 1245899999999999999999999 8999999999999999
Q ss_pred CCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCC
Q 002155 816 NEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGG 893 (959)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 893 (959)
+.++.+||+|||+++........ ......+++.|+|||.+.++.|+.++|||||||++|||++ |.+||.....
T Consensus 169 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~----- 243 (299)
T d1fgka_ 169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV----- 243 (299)
T ss_dssp CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCH-----
Confidence 99999999999999876543222 2344578999999999999999999999999999999998 6777653221
Q ss_pred chHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 894 NLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..+.+.+..+.. +... ..+...+.+++.+||+.||++||||.||++.|+++-
T Consensus 244 ---~~~~~~i~~~~~-----~~~p----~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~ 295 (299)
T d1fgka_ 244 ---EELFKLLKEGHR-----MDKP----SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295 (299)
T ss_dssp ---HHHHHHHHTTCC-----CCCC----SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHHHHHHHcCCC-----CCCC----ccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence 223333333321 1111 122346889999999999999999999999999874
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-44 Score=386.24 Aligned_cols=258 Identities=26% Similarity=0.303 Sum_probs=194.6
Q ss_pred CCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh-----hHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 683 KTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ-----GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
..++||+|+||+||+|+++ +|+.||||+++..... ..+.+.+|+.++++++|||||++++++..++..|+||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 3578999999999999975 6899999998654322 124578999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+.++++..+.... ..+++.++..++.||+.||+||| +.||+||||||+|||++.++.+||+|||.++......
T Consensus 82 ~~~~~~~~~~~~~----~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~ 154 (299)
T d1ua2a_ 82 METDLEVIIKDNS----LVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN 154 (299)
T ss_dssp CSEEHHHHHTTCC----SSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred hcchHHhhhhhcc----cCCCHHHHHHHHHHHHHHHHHhh---ccceecccCCcceEEecCCCccccccCccccccCCCc
Confidence 9988776665433 35788899999999999999999 8999999999999999999999999999998765322
Q ss_pred ccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc-
Q 002155 837 THVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP- 914 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 914 (959)
......+||+.|+|||++.+. .++.++||||+||++|||++|.+||....+. +....+.+...........+.
T Consensus 155 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~----~~l~~i~~~~~~~~~~~~~~~~ 229 (299)
T d1ua2a_ 155 -RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL----DQLTRIFETLGTPTEEQWPDMC 229 (299)
T ss_dssp -CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCCCCTTTSSSTT
T ss_pred -ccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHH----HHHHHHHHhcCCCChhhccchh
Confidence 223345799999999987654 5799999999999999999999998653211 112222222111111110000
Q ss_pred --------cccCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 --------TVLTADS-----KPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 --------~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...+... ......+.+++.+||+.||++||||+|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H 280 (299)
T d1ua2a_ 230 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280 (299)
T ss_dssp SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence 0000011 1223468899999999999999999999874
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-44 Score=389.79 Aligned_cols=261 Identities=28% Similarity=0.423 Sum_probs=208.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEc------CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecCCce
Q 002155 679 NNFCKTNIIGDGGFGTVYKAAL------PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 750 (959)
++|++.++||+|+||.||+|++ .+++.||||+++... ......+.+|+.+++++ +|||||+++++|..++..
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~ 102 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence 5788899999999999999975 246789999997543 34456788999999999 699999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcC--------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC
Q 002155 751 LLVYEYMVNGSLDLWLRNRTG--------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN 816 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~--------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 816 (959)
++|||||++|+|.++++.... ....+++..+..++.||++|++||| +.++|||||||+||+++
T Consensus 103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH---~~~ivHrDLKp~NIl~~ 179 (311)
T d1t46a_ 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLT 179 (311)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEE
T ss_pred EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccccccccccc
Confidence 999999999999999976532 1235889999999999999999999 88999999999999999
Q ss_pred CCCcEEEcccccccccccccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCch
Q 002155 817 EEFEAKVADFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNL 895 (959)
Q Consensus 817 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~ 895 (959)
.++.+|++|||.++....... .......||+.|+|||++.++.++.++|||||||++|||+|++.|+......
T Consensus 180 ~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~------ 253 (311)
T d1t46a_ 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV------ 253 (311)
T ss_dssp TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS------
T ss_pred ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCH------
Confidence 999999999999987654332 2234457899999999999999999999999999999999955554322211
Q ss_pred HHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 896 VGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+.+.+.+..+. .+.. +......+.+++.+||+.||++||||+||++.|+++.
T Consensus 254 ~~~~~~~i~~~~-----~~~~----~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i 306 (311)
T d1t46a_ 254 DSKFYKMIKEGF-----RMLS----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (311)
T ss_dssp SHHHHHHHHHTC-----CCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC-----CCCC----cccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhh
Confidence 111222222221 1111 1123346889999999999999999999999998763
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-43 Score=382.62 Aligned_cols=258 Identities=28% Similarity=0.426 Sum_probs=208.1
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
++|+..+.||+|+||+||+|.+. +++.||||+++.. .......|.+|+.++++++|||||++++++..++..+
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 99 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 99 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence 57788899999999999999863 3578999999754 3344456889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhc------CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcc
Q 002155 752 LVYEYMVNGSLDLWLRNRT------GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVAD 825 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 825 (959)
+||||+++|+|.+++.... .....+++..+.+++.|+++||.||| +.+|+||||||+|||+++++++||+|
T Consensus 100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH---~~~ivHrDlk~~NiLld~~~~~Kl~D 176 (308)
T d1p4oa_ 100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGD 176 (308)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEECC
T ss_pred EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeeceEcCCceeecCCceEEEee
Confidence 9999999999999987543 22235688999999999999999999 78999999999999999999999999
Q ss_pred cccccccccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCC-CCCCCCCccccCCchHHHHHHHh
Q 002155 826 FGLARLISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK-EPTGPEFKDIEGGNLVGWVFQKM 903 (959)
Q Consensus 826 fg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~-~p~~~~~~~~~~~~~~~~~~~~~ 903 (959)
||+++......... .....||+.|+|||.+.+..++.++|||||||++|||+||. +||... . ... +...+
T Consensus 177 FGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~-~------~~~-~~~~i 248 (308)
T d1p4oa_ 177 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-S------NEQ-VLRFV 248 (308)
T ss_dssp TTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-C------HHH-HHHHH
T ss_pred cccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCC-C------HHH-HHHHH
Confidence 99998764432222 23446899999999999999999999999999999999985 555432 1 111 22233
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
..+... .. +..+...+.+++.+||+.||++|||++||+++|++.
T Consensus 249 ~~~~~~-----~~----p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~ 292 (308)
T d1p4oa_ 249 MEGGLL-----DK----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 292 (308)
T ss_dssp HTTCCC-----CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred HhCCCC-----CC----cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence 322211 11 112334688999999999999999999999999875
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.1e-44 Score=382.32 Aligned_cols=267 Identities=26% Similarity=0.365 Sum_probs=200.1
Q ss_pred cCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
++|++.+.||+|+||+||+|++ .+|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 5799999999999999999986 478999999986543 2235678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+.++ +.+++.... ...+++..+..++.|++.||+||| +.|||||||||+|||++.++.+||+|||.|+.....
T Consensus 82 ~~~~~-~~~~~~~~~--~~~l~e~~~~~~~~qil~~L~yLH---~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~ 155 (298)
T d1gz8a_ 82 FLHQD-LKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155 (298)
T ss_dssp CCSEE-HHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ecCCc-hhhhhhhhc--ccCCCHHHHHHHHHHHHHHHHHhh---cCCEEccccCchheeecccCcceeccCCcceeccCC
Confidence 99764 444443322 235899999999999999999999 899999999999999999999999999999876532
Q ss_pred cccccccccccccccCCCcCCCCC-CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc----
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGR-STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD---- 910 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 910 (959)
........||+.|+|||+..... ++.++||||+||++|||++|+.||...... +....+...........
T Consensus 156 -~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~ 230 (298)
T d1gz8a_ 156 -VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI----DQLFRIFRTLGTPDEVVWPGV 230 (298)
T ss_dssp -SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCTTTSTTG
T ss_pred -cccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHH----HHHHHHHHhcCCCchhhcccc
Confidence 22334557999999999866665 578999999999999999999999643211 11111111110000000
Q ss_pred ----ccC---ccccCCC----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhh
Q 002155 911 ----VLD---PTVLTAD----SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF--LKEI 956 (959)
Q Consensus 911 ----~~~---~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~--L~~l 956 (959)
... +...... .......+.+++.+||+.||++|||++|++++ ++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~ 289 (298)
T d1gz8a_ 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289 (298)
T ss_dssp GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred ccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccC
Confidence 000 0000000 11223567889999999999999999999986 5443
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=9.2e-44 Score=380.20 Aligned_cols=262 Identities=25% Similarity=0.308 Sum_probs=200.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|++.++||+|+||+||+|++++|+.||||++.... ....+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 5899999999999999999999999999999986543 33356789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+.++.+..+.... ..+++..+..++.||+.||+||| +.+||||||||+|||++.++.+|++|||.+.......
T Consensus 82 ~~~~~~~~~~~~~----~~l~~~~~~~i~~qi~~~L~~LH---~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~ 154 (286)
T d1ob3a_ 82 LDQDLKKLLDVCE----GGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (286)
T ss_dssp CSEEHHHHHHTST----TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred ehhhhHHHHHhhc----CCcchhhhHHHHHHHHHHHHHhc---cCcEEecCCCCceeeEcCCCCEEecccccceecccCc
Confidence 9887776666543 35899999999999999999999 7899999999999999999999999999998765322
Q ss_pred ccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc----
Q 002155 837 THVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV---- 911 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 911 (959)
.......+++.|+|||.+.+. .++.++||||+||++|||++|+.||...... +....+...........+
T Consensus 155 -~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~ 229 (286)
T d1ob3a_ 155 -RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA----DQLMRIFRILGTPNSKNWPNVT 229 (286)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCTTTSTTGG
T ss_pred -cccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHH----HHHHHHHHhhCCCChhhccchh
Confidence 223345689999999987654 5689999999999999999999999653211 111111111111000000
Q ss_pred -----------cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 -----------LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 -----------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..+.............+.+++.+||+.||++|||++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H 281 (286)
T d1ob3a_ 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (286)
T ss_dssp GSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00000011112233567899999999999999999999864
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-44 Score=377.16 Aligned_cols=240 Identities=26% Similarity=0.407 Sum_probs=195.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch------hhHHHHHHHHHHHhcCC--CCceeccccceecCCc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT------QGHREFTAEMETLGKVK--HQNLVPLLGYCSFDEE 749 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~ 749 (959)
++|++.+.||+|+||+||+|++. +|+.||||++..... .....+.+|+.++++++ |||||++++++.+++.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 57999999999999999999865 789999999864321 11233568999999986 8999999999999999
Q ss_pred eEEEEEeccC-CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-CCcEEEcccc
Q 002155 750 KLLVYEYMVN-GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE-EFEAKVADFG 827 (959)
Q Consensus 750 ~~lv~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg 827 (959)
.++||||+.+ +++.+++.... .+++.+++.++.|++.||+||| +.||+||||||+||+++. ++.+||+|||
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~~~----~l~e~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NIll~~~~~~vkl~DFG 156 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITERG----ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG 156 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEEEeccCcchHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---HCCCccccCcccceEEecCCCeEEECccc
Confidence 9999999976 67888887654 5899999999999999999999 899999999999999985 4799999999
Q ss_pred cccccccccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 828 LARLISACETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
+|+.... .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||... ..+...
T Consensus 157 ~a~~~~~---~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~--------------~~i~~~ 219 (273)
T d1xwsa_ 157 SGALLKD---TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------------EEIIRG 219 (273)
T ss_dssp TCEECCS---SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH--------------HHHHHC
T ss_pred cceeccc---ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc--------------hHHhhc
Confidence 9976532 23345689999999999877665 57789999999999999999998541 111111
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. .. + .. ....+.+++.+||+.||++|||++|++++
T Consensus 220 ~~--~~-~---~~----~s~~~~~li~~~L~~dp~~R~s~~eil~h 255 (273)
T d1xwsa_ 220 QV--FF-R---QR----VSSECQHLIRWCLALRPSDRPTFEEIQNH 255 (273)
T ss_dssp CC--CC-S---SC----CCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cc--CC-C---CC----CCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 11 01 1 11 22467889999999999999999999874
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-43 Score=379.06 Aligned_cols=267 Identities=24% Similarity=0.318 Sum_probs=197.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-C-CCEEEEEEccccc--hhhHHHHHHHHHHHhcC---CCCceeccccceec----
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-D-GKTVAVKKLSQAK--TQGHREFTAEMETLGKV---KHQNLVPLLGYCSF---- 746 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~---- 746 (959)
.++|++.+.||+|+||+||+|++. + ++.||||+++... ......+.+|+.+++.+ +||||++++++|..
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~ 85 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 85 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence 478999999999999999999864 4 5679999986432 22223455677766655 79999999998853
Q ss_pred -CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcc
Q 002155 747 -DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVAD 825 (959)
Q Consensus 747 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 825 (959)
....+++|||++++.+........ ..+++..+..++.|++.||+||| +.+||||||||+|||++.++.+||+|
T Consensus 86 ~~~~~~~~~e~~~~~~~~~~~~~~~---~~~~~~~~~~~~~qi~~aL~yLH---~~~ivHrDiKp~NILi~~~~~~kl~d 159 (305)
T d1blxa_ 86 RETKLTLVFEHVDQDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLAD 159 (305)
T ss_dssp SEEEEEEEEECCSCBHHHHHHHSCT---TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECS
T ss_pred cCceEEEEEEeccCCchhhhhhccC---CCCCHHHHHHHHHHHHHHHHHHH---hCCEEecCCCccEEEEcCCCCeeecc
Confidence 346799999998877765544332 35789999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhc
Q 002155 826 FGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK 905 (959)
Q Consensus 826 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (959)
||.++.... ........||+.|+|||++.+..|+.++||||+||++|||++|++||...... +....+......
T Consensus 160 fg~~~~~~~--~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~----~~~~~i~~~~~~ 233 (305)
T d1blxa_ 160 FGLARIYSF--QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV----DQLGKILDVIGL 233 (305)
T ss_dssp CCSCCCCCG--GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCC
T ss_pred hhhhhhhcc--cccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHH----HHHHHHHHhhCC
Confidence 999976543 22334568999999999999999999999999999999999999999653211 111111111111
Q ss_pred Ccccccc-------------CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhh
Q 002155 906 GQAADVL-------------DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF--LKEI 956 (959)
Q Consensus 906 ~~~~~~~-------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~--L~~l 956 (959)
....... .+.............+.+++.+||+.||++||||+|++++ ++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i 299 (305)
T d1blxa_ 234 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 299 (305)
T ss_dssp CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred CchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCc
Confidence 0000000 0000001112233467789999999999999999999875 5554
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-41 Score=374.43 Aligned_cols=266 Identities=24% Similarity=0.256 Sum_probs=193.3
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecC------CceEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD------EEKLL 752 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~l 752 (959)
+|+..++||+|+||+||+|++. +|+.||||++...... ..+|++++++++||||++++++|... .+.++
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~----~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS----CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH----HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence 5778899999999999999975 6899999998754322 34799999999999999999988432 34689
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC-cEEEcccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF-EAKVADFGLARL 831 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~ 831 (959)
||||++++....+.+ .......+++.++..++.||+.||+||| +.||+||||||+|||++.++ .+||+|||+++.
T Consensus 97 v~Ey~~~~~~~~l~~-~~~~~~~l~~~~~~~i~~qil~aL~yLH---~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~ 172 (350)
T d1q5ka_ 97 VLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172 (350)
T ss_dssp EEECCSEEHHHHHHH-HHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTTCCEEECCCTTCEE
T ss_pred EEeccCCccHHHHHh-hhhccCCCCHHHHHHHHHHHHHHHHHHH---hcCCcccCCCcceEEEecCCCceeEecccchhh
Confidence 999998764444333 2222346899999999999999999999 89999999999999999775 899999999987
Q ss_pred cccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccC--------CchHHHHHHH
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG--------GNLVGWVFQK 902 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~--------~~~~~~~~~~ 902 (959)
..... ......||+.|+|||.+.+ ..++.++||||+||++|||++|++||........- .....+...
T Consensus 173 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~- 249 (350)
T d1q5ka_ 173 LVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE- 249 (350)
T ss_dssp CCTTS--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH-
T ss_pred ccCCc--ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhh-
Confidence 65322 2334579999999997664 56899999999999999999999999653221100 000000000
Q ss_pred hhcCccccccC----ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhh
Q 002155 903 MKKGQAADVLD----PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF--LKEI 956 (959)
Q Consensus 903 ~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~--L~~l 956 (959)
........... ..............+.+++.+||+.||++||||+|++++ ++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 309 (350)
T d1q5ka_ 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309 (350)
T ss_dssp HCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred hccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence 00000000000 000001112234467889999999999999999999974 4444
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.2e-41 Score=361.94 Aligned_cols=261 Identities=19% Similarity=0.225 Sum_probs=197.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceecc-ccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPL-LGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~-~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||+||+|++. +|+.||||++..... ..++..|+++++.++|++++.. .+++.+++..++|||
T Consensus 6 g~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme 83 (299)
T d1ckia_ 6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 83 (299)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEE
Confidence 467999999999999999999864 689999998765332 2357789999999987765554 555577788899999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---CCcEEEccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE---EFEAKVADFGLARLI 832 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~~~~~ 832 (959)
|+ ++++.+.+.... ..+++..+..++.|++.||+||| +.||+||||||+||+++. +..+|++|||+|+..
T Consensus 84 ~~-~~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~ 156 (299)
T d1ckia_ 84 LL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 156 (299)
T ss_dssp CC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEEC
T ss_pred Ec-CCchhhhhhhcc---CCCcHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHhhccccccCCCceeeeeccCcceec
Confidence 99 557766665543 35899999999999999999999 899999999999999864 457999999999876
Q ss_pred ccccc------cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 833 SACET------HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 833 ~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
..... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......................
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T d1ckia_ 157 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 236 (299)
T ss_dssp BCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSC
T ss_pred cccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCC
Confidence 53222 122345799999999999999999999999999999999999999976433322111111111111110
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. +.. ...++..+.+++.+||+.||++||+++++.+.|+++.
T Consensus 237 -~-----~~~----~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~ 277 (299)
T d1ckia_ 237 -I-----EVL----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 277 (299)
T ss_dssp -H-----HHH----TTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHH
T ss_pred -h-----hHh----ccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 0 000 1112346788999999999999999999998888763
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=5.4e-41 Score=358.75 Aligned_cols=260 Identities=15% Similarity=0.177 Sum_probs=203.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCC-CceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKH-QNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.++||+|+||+||+|++. +|+.||||++..... ...+.+|++.++.++| +|++.+++++..+...++|||
T Consensus 4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme 81 (293)
T d1csna_ 4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 81 (293)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEE
Confidence 468999999999999999999965 689999998754322 2346788899999875 899999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-----CCcEEEccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE-----EFEAKVADFGLAR 830 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-----~~~~kl~Dfg~~~ 830 (959)
|+ +++|.++++... ..+++.++..++.|++.|++||| +.||+||||||+||+++. ++.+||+|||+|+
T Consensus 82 ~~-~~~l~~~~~~~~---~~~~~~~~~~i~~q~~~~l~~lH---~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~ 154 (293)
T d1csna_ 82 LL-GPSLEDLLDLCG---RKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 154 (293)
T ss_dssp CC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred ec-CCCHHHHHHhhc---cchhhHHHHHHHHHHHHHHHHHH---HCCceeccCCccceeecCcccccCCceEEcccceeE
Confidence 99 689999987654 35889999999999999999999 899999999999999974 5789999999998
Q ss_pred ccccccc------cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh
Q 002155 831 LISACET------HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904 (959)
Q Consensus 831 ~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (959)
....... .......||+.|||||.+.+..++.++||||+||++|||+||+.||........ ......+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~-~~~~~~i~~~~~ 233 (293)
T d1csna_ 155 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-KQKYERIGEKKQ 233 (293)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH-HHHHHHHHHHHH
T ss_pred EcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhH-HHHHHHHHhccC
Confidence 7643221 122345799999999999999999999999999999999999999965322211 001111111111
Q ss_pred cCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
.... +..... ++..+.+++..|+..+|++||+++.+.+.|+++
T Consensus 234 ~~~~-----~~l~~~----~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~ 276 (293)
T d1csna_ 234 STPL-----RELCAG----FPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 276 (293)
T ss_dssp HSCH-----HHHTTT----SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred CCCh-----HHhcCC----CCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 1100 001111 224678889999999999999999999988875
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-41 Score=370.63 Aligned_cols=263 Identities=23% Similarity=0.308 Sum_probs=195.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCC----ceE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE----EKL 751 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~ 751 (959)
+++|++.+.||+|+||+||+|++ .+|+.||||++.... ....+.+.+|+.++++++||||+++++++..+. ..+
T Consensus 7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~ 86 (345)
T d1pmea_ 7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 86 (345)
T ss_dssp CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence 46799999999999999999986 479999999987543 344567889999999999999999999986543 235
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
++++|+.+|+|.+++... .+++..+..++.|++.||+||| +.|||||||||+|||++.++.+||+|||+++.
T Consensus 87 ~l~~~~~~g~L~~~l~~~-----~l~~~~i~~i~~qil~al~yLH---~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~ 158 (345)
T d1pmea_ 87 YLVTHLMGADLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 158 (345)
T ss_dssp EEEEECCCEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEeecCCchhhhhhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCcceEEECCCCCEEEcccCceee
Confidence 566677799999999754 4899999999999999999999 88999999999999999999999999999987
Q ss_pred ccccccc--ccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 832 ISACETH--VSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 832 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
....... ......||+.|+|||++.. ..++.++||||+||++|||++|+.||....... ..............
T Consensus 159 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~----~~~~~~~~~~~~~~ 234 (345)
T d1pmea_ 159 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD----QLNHILGILGSPSQ 234 (345)
T ss_dssp CCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCSCCH
T ss_pred ccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHH----HHHHHhhhccCCCh
Confidence 6433222 2344578999999998754 457899999999999999999999996542210 00000000000000
Q ss_pred cc-------------ccCccccCCC----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 AD-------------VLDPTVLTAD----SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~-------------~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ...+...... .......+.+++.+|++.||++||||+|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 235 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp HHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00 0000000000 01122467899999999999999999999975
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-41 Score=368.10 Aligned_cols=253 Identities=26% Similarity=0.346 Sum_probs=203.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEccccc----hhhHHHHHHHHHHHhcCCC-CceeccccceecCCc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQAK----TQGHREFTAEMETLGKVKH-QNLVPLLGYCSFDEE 749 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~ 749 (959)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++| |||+++++++.+...
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 57999999999999999999752 47899999986432 2334567889999999977 899999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.++||||+.+|+|.+++.... .+++..+..++.|++.|++|+| +.+||||||||+||+++.++.+||+|||++
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~~----~~~e~~~~~~~~Qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~vkL~DFG~a 176 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQRE----RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLS 176 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eeeeeecccccHHHHHHHhcc----cccHHHHHHHHHHHHHHHHHhh---cCCEEeccCCccceeecCCCCEEEeeccch
Confidence 999999999999999998765 4677889999999999999999 889999999999999999999999999999
Q ss_pred cccccccccccccccccccccCCCcCCCC--CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 830 RLISACETHVSTDIAGTFGYIPPEYGQSG--RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
+.+............|++.|+|||.+.+. .++.++||||+||++|||++|+.||...... .....+........
T Consensus 177 ~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~----~~~~~i~~~~~~~~ 252 (322)
T d1vzoa_ 177 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK----NSQAEISRRILKSE 252 (322)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC----CCHHHHHHHHHHCC
T ss_pred hhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHhcccCC
Confidence 87755444445556799999999987654 4688999999999999999999999764332 12222222221111
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
+. .+......+.+++.+||++||++|| |++|++++
T Consensus 253 ------~~----~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H 292 (322)
T d1vzoa_ 253 ------PP----YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 292 (322)
T ss_dssp ------CC----CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ------CC----CcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence 11 1122345788899999999999999 58899863
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-41 Score=363.97 Aligned_cols=264 Identities=25% Similarity=0.284 Sum_probs=194.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceec--------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSF-------- 746 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------- 746 (959)
.++|++.+.||+|+||+||+|++. +|+.||||++... ......++.+|+.++++++|||++++++++..
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence 468999999999999999999974 7999999998643 23345678899999999999999999998754
Q ss_pred CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 747 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
++..++||||++++.+..+.... ..+++..++.++.|++.|+.||| +.||+||||||+|||++.++.+|++||
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~~~~----~~~~~~~~~~i~~qil~~l~~lH---~~~ivHrDlKp~NILl~~~~~~kl~df 161 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLSNVL----VKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADF 161 (318)
T ss_dssp --CEEEEEECCCEEHHHHHTCTT----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCC
T ss_pred CceEEEEEeccCCCccchhhhcc----cccccHHHHHHHHHHHHHHHHhc---cCCEEecCcCchheeecCCCcEEeeec
Confidence 34679999999887766554432 35788999999999999999999 889999999999999999999999999
Q ss_pred ccccccccccc---cccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 827 GLARLISACET---HVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 827 g~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
|+++....... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .....+.+.
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~----~~~~~i~~~ 237 (318)
T d3blha1 162 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ----HQLALISQL 237 (318)
T ss_dssp TTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHH
T ss_pred ceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHH----HHHHHHHHh
Confidence 99976653221 122335799999999987655 6899999999999999999999999643211 111111111
Q ss_pred hhcCccccc-----------cCccccCC-CCH------HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKGQAADV-----------LDPTVLTA-DSK------PMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~~~~~~-----------~~~~~~~~-~~~------~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......... ........ ... .....+.+++.+||+.||++||||+|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H 305 (318)
T d3blha1 238 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305 (318)
T ss_dssp HCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence 111000000 00000000 001 112356789999999999999999999875
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-41 Score=371.37 Aligned_cols=258 Identities=26% Similarity=0.314 Sum_probs=191.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCC------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE------ 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 748 (959)
.++|++.+.||+|+||+||+|++. +|+.||||+++.. .....+.+.+|+++|++++|||||+++++|...+
T Consensus 17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~ 96 (346)
T d1cm8a_ 17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 96 (346)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence 357889999999999999999975 6999999999753 2334567889999999999999999999987654
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
+.|+||||+ ++++..+.+.. .+++..++.++.|++.||+||| +.||+||||||+|||++.++.+|++|||.
T Consensus 97 ~~~lv~e~~-~~~l~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH---~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~ 167 (346)
T d1cm8a_ 97 DFYLVMPFM-GTDLGKLMKHE-----KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGL 167 (346)
T ss_dssp CCEEEEECC-SEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecc-cccHHHHHHhc-----cccHHHHHHHHHHHHHHHHHHH---hCCCcccccCcchhhcccccccccccccc
Confidence 569999999 56788877653 4899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
|+.... ......||+.|+|||++.+ ..++.++||||+||++|||++|++||....... .............
T Consensus 168 a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~----~~~~~~~~~~~~~ 239 (346)
T d1cm8a_ 168 ARQADS----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD----QLKEIMKVTGTPP 239 (346)
T ss_dssp CEECCS----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCC
T ss_pred eeccCC----ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHH----HHHHHHhccCCCc
Confidence 987542 2344679999999998765 456899999999999999999999996532110 0000000000000
Q ss_pred -----------------cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 -----------------AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 -----------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
....................+.+++.+||+.||++||||+|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H 301 (346)
T d1cm8a_ 240 AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 301 (346)
T ss_dssp HHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000000000001111223456789999999999999999999986
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.1e-41 Score=359.24 Aligned_cols=263 Identities=24% Similarity=0.300 Sum_probs=203.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
++|++.+.||+|+||+||+|++. +|+.||||+++... ......+.+|+.+++.++||||+++++++...+..++|||
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 57999999999999999999975 78899999986432 3345778899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
++.++++..+++... .+++..+..++.|++.||+||| +.|||||||||+||+++.++.+|++|||.++.....
T Consensus 82 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~q~~~aL~~lH---~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~ 154 (292)
T d1unla_ 82 FCDQDLKKYFDSCNG----DLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSEEHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSC
T ss_pred ecccccccccccccc----ccchhHHHHHHHHHHHHHHHhh---cCCEeeecccCcccccccCCceeeeecchhhcccCC
Confidence 999999988876543 5788999999999999999999 889999999999999999999999999999876542
Q ss_pred cccccccccccccccCCCcCCCCC-CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc---
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGR-STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV--- 911 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 911 (959)
. .......+++.|+|||++.... ++.++||||+||++|||++|+.||....... +....+............
T Consensus 155 ~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 230 (292)
T d1unla_ 155 V-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD---DQLKRIFRLLGTPTEEQWPSM 230 (292)
T ss_dssp C-SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHH---HHHHHHHHHHCCCCTTTCTTG
T ss_pred C-ccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHH---HHHHHHHhhcCCCChhhhhhh
Confidence 2 2223346788999999877655 6899999999999999999999975432211 111111111111000000
Q ss_pred -----------c-CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 -----------L-DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 -----------~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ...............+.+++.+|++.||.+||||+|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H 283 (292)
T d1unla_ 231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp GGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 0000111122334567889999999999999999999874
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.1e-40 Score=363.70 Aligned_cols=256 Identities=19% Similarity=0.265 Sum_probs=195.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CCceeccccceec--CCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGYCSF--DEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--~~~~~lv~ 754 (959)
++|++.++||+|+||+||+|++. +|+.||||+++... .+++.+|+++++++. ||||+++++++.. ....++||
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~ 111 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 111 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence 67999999999999999999974 68999999987533 456889999999995 9999999999864 45689999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC-cEEEcccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF-EAKVADFGLARLIS 833 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~~ 833 (959)
||+++++|..+. ..+++..+..++.||+.||+||| +.|||||||||+|||++.++ .+||+|||+|+...
T Consensus 112 e~~~~~~L~~~~-------~~l~e~~i~~i~~qil~aL~~LH---~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~ 181 (328)
T d3bqca1 112 EHVNNTDFKQLY-------QTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 181 (328)
T ss_dssp ECCCSCBGGGTT-------TSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCGGGCEECC
T ss_pred eecCCCcHHHHh-------cCCCHHHHHHHHHHHHHHHHHHh---hcccccccccccceEEcCCCCeeeecccccceecc
Confidence 999999997653 24888999999999999999999 89999999999999998655 69999999998765
Q ss_pred cccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH---------h
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK---------M 903 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~---------~ 903 (959)
... ......+|+.|+|||.+.+. .++.++||||+||++|||++|+.||........ ....+... .
T Consensus 182 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~---~~~~i~~~~g~~~~~~~~ 256 (328)
T d3bqca1 182 PGQ--EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD---QLVRIAKVLGTEDLYDYI 256 (328)
T ss_dssp TTC--CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH---HHHHHHHHHCHHHHHHHH
T ss_pred CCC--cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHH---HHHHHHHHHCCchhhhhh
Confidence 322 23445789999999987665 479999999999999999999999975433211 00000000 0
Q ss_pred hcC--ccc----ccc--------CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 904 KKG--QAA----DVL--------DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 904 ~~~--~~~----~~~--------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... ... ... ...............+.+++.+|++.||++|||++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H 319 (328)
T d3bqca1 257 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319 (328)
T ss_dssp HHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000 000 000 0000111112234567899999999999999999999873
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-40 Score=361.41 Aligned_cols=262 Identities=24% Similarity=0.259 Sum_probs=189.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceec------CCc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSF------DEE 749 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~ 749 (959)
++|++.++||+|+||+||+|++. +|+.||||++... .......+.+|+.++++++||||++++++|.. ..+
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~ 96 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 96 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence 57999999999999999999976 6999999998754 23344568899999999999999999999853 367
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.|+||||+.++.+. .+. ..+++..++.++.||+.|++||| +.||+||||||+|||++.++.+|++|||++
T Consensus 97 ~~iv~Ey~~~~l~~-~~~------~~~~~~~i~~~~~qil~gl~~LH---~~giiHrDlKP~Nil~~~~~~~kl~df~~~ 166 (355)
T d2b1pa1 97 VYLVMELMDANLCQ-VIQ------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_dssp EEEEEECCSEEHHH-HHT------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred eEEEEeccchHHHH-hhh------cCCCHHHHHHHHHHHHHHHHHhh---hcccccccCCccccccccccceeeechhhh
Confidence 89999999775554 332 24788999999999999999999 889999999999999999999999999998
Q ss_pred cccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCC---------------c
Q 002155 830 RLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGG---------------N 894 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~---------------~ 894 (959)
+.... ........+|+.|+|||++.+..++.++||||+||++|||++|++||.......... .
T Consensus 167 ~~~~~--~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~ 244 (355)
T d2b1pa1 167 RTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244 (355)
T ss_dssp ----------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred hcccc--ccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHH
Confidence 76543 223344578999999999999999999999999999999999999996432110000 0
Q ss_pred hHHHHHHHhhcCcccc------ccCccccCCC---CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 895 LVGWVFQKMKKGQAAD------VLDPTVLTAD---SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 895 ~~~~~~~~~~~~~~~~------~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
................ .......... .......+.+++.+|++.||++||||+|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp SCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000011111100000 0000011111 23356678999999999999999999999865
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-40 Score=361.07 Aligned_cols=259 Identities=24% Similarity=0.288 Sum_probs=192.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecC-----Cc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD-----EE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~ 749 (959)
.++|++.++||+|+||+||+|++. +|+.||||++.... ....+.+.+|++++++++|||+|++++++... ..
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~ 96 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 96 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence 467999999999999999999864 79999999997542 33445688999999999999999999988533 34
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.+++|+|+.+|+|.++++.. .+++.++..++.||+.||+||| +.||+||||||+|||++.++.+|++|||.+
T Consensus 97 ~~~i~~~~~gg~L~~~~~~~-----~l~e~~~~~i~~qil~aL~~LH---~~giiHrDiKp~NILi~~~~~~kl~dfg~a 168 (348)
T d2gfsa1 97 DVYLVTHLMGADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 168 (348)
T ss_dssp CCEEEEECCSEEHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCC---
T ss_pred eEEEEEeecCCchhhhcccc-----cccHHHHHHHHHHHHHHHHHHH---hCCCcccccCCccccccccccccccccchh
Confidence 57778888999999999653 4899999999999999999999 889999999999999999999999999999
Q ss_pred cccccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 830 RLISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
..... ......|++.|+|||...+. .++.++||||+||++|+|++|++||...... .....+.........
T Consensus 169 ~~~~~----~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~----~~~~~i~~~~~~~~~ 240 (348)
T d2gfsa1 169 RHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI----DQLKLILRLVGTPGA 240 (348)
T ss_dssp -CCTG----GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCH
T ss_pred cccCc----ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHH----HHHHHHHHhcCCCCh
Confidence 76432 23445789999999976655 4689999999999999999999999653211 011111111000000
Q ss_pred cc-----------ccC--ccccCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 AD-----------VLD--PTVLTA----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~-----------~~~--~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ... +..... ........+.+++.+|++.||++||||+|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H 301 (348)
T d2gfsa1 241 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301 (348)
T ss_dssp HHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence 00 000 000000 001123457789999999999999999999974
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.7e-35 Score=325.20 Aligned_cols=265 Identities=21% Similarity=0.183 Sum_probs=190.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC-----------CCceeccccceec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-----------HQNLVPLLGYCSF 746 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~~~ 746 (959)
.+|++.++||+|+||+||+|++. +|+.||||+++.... ..+.+.+|+.+++.++ |+||+++++++..
T Consensus 13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~-~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~ 91 (362)
T d1q8ya_ 13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 91 (362)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecccc-chHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence 35899999999999999999974 799999999975432 2356778888888775 5789999988754
Q ss_pred C--CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC-----
Q 002155 747 D--EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF----- 819 (959)
Q Consensus 747 ~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----- 819 (959)
. ...++||+++..+.......... ....+++..+..++.||+.|++|||+ ..||+||||||+|||++.++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~~ 168 (362)
T d1q8ya_ 92 KGPNGVHVVMVFEVLGENLLALIKKY-EHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENL 168 (362)
T ss_dssp EETTEEEEEEEECCCCEEHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTE
T ss_pred ccccceeeeeeecccccccccccccc-cccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccCccccc
Confidence 3 45667777776554433332222 23467889999999999999999994 48999999999999997654
Q ss_pred -cEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHH
Q 002155 820 -EAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGW 898 (959)
Q Consensus 820 -~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 898 (959)
.++++|||.+..... ......||+.|+|||++....++.++||||+||+++||++|+.||.+........ ....
T Consensus 169 ~~~kl~dfg~s~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~-~~~~ 243 (362)
T d1q8ya_ 169 IQIKIADLGNACWYDE----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK-DDDH 243 (362)
T ss_dssp EEEEECCCTTCEETTB----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------C-HHHH
T ss_pred ceeeEeeccccccccc----ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccc-hhHH
Confidence 499999999976432 2244579999999999999999999999999999999999999996542211111 0000
Q ss_pred HHHHhh-----------c----------CccccccCc----------cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 002155 899 VFQKMK-----------K----------GQAADVLDP----------TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTML 947 (959)
Q Consensus 899 ~~~~~~-----------~----------~~~~~~~~~----------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 947 (959)
....+. . ......... .............+.+++.+|++.||++||||+
T Consensus 244 ~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~ 323 (362)
T d1q8ya_ 244 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 323 (362)
T ss_dssp HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred HHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHH
Confidence 000000 0 000000000 001223466778899999999999999999999
Q ss_pred HHHHH
Q 002155 948 HVLKF 952 (959)
Q Consensus 948 ell~~ 952 (959)
|++++
T Consensus 324 e~L~H 328 (362)
T d1q8ya_ 324 GLVNH 328 (362)
T ss_dssp HHHTC
T ss_pred HHhcC
Confidence 99875
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.96 E-value=1.4e-30 Score=281.84 Aligned_cols=259 Identities=29% Similarity=0.486 Sum_probs=230.2
Q ss_pred ccccEEEccCCcCcc--cCCccccCCCCCCEEEccC-CCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcE
Q 002155 317 VVVVDLLLNNNMLSG--KIPGSLSRLTNLTTLDLSR-NQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVK 393 (959)
Q Consensus 317 ~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 393 (959)
..++.|+|++|.+++ .+|..+.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++.+..+..+..+..|+.
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 357888888888876 4678899999999999986 8888888888999999999999999999888888899999999
Q ss_pred EEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhccccc-ceEeeccccccCCccccccchhhhhhceeccCC
Q 002155 394 LNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNL-VGLYLQHNKLSGPVDELFSNSAAWKIATMNMSN 472 (959)
Q Consensus 394 L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L-~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~ 472 (959)
+++++|.+.+..|..+.++++|+++++++|.+.+.+|..+..+..+ +.+++++|++++..+..+... ....+++++
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l---~~~~l~l~~ 206 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL---NLAFVDLSR 206 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC---CCSEEECCS
T ss_pred cccccccccccCchhhccCcccceeecccccccccccccccccccccccccccccccccccccccccc---ccccccccc
Confidence 9999999988889999999999999999999988889888888876 788999999988877766544 456789999
Q ss_pred cccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCC
Q 002155 473 NLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVP 552 (959)
Q Consensus 473 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 552 (959)
|.+.+.+|..+..+++|+.|++++|.+++.+ +.++.+++|++|+|++|+++|.+|+.|.++++|++|+|++|+|+|.+|
T Consensus 207 ~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~-~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP 285 (313)
T d1ogqa_ 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp SEEEECCGGGCCTTSCCSEEECCSSEECCBG-GGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred ccccccccccccccccccccccccccccccc-cccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCC
Confidence 9999999999999999999999999999655 468899999999999999999999999999999999999999999889
Q ss_pred CCcccCCCccccccCCCCCCCCCCCCCc
Q 002155 553 RSGICQNLSKISLTGNKDLCGKIIGSNC 580 (959)
Q Consensus 553 ~~~~~~~l~~l~l~~N~~~c~~~~~~~c 580 (959)
..+.+++|+.+++.||+.+||.|+. .|
T Consensus 286 ~~~~L~~L~~l~l~~N~~l~g~plp-~c 312 (313)
T d1ogqa_ 286 QGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp CSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred CcccCCCCCHHHhCCCccccCCCCC-CC
Confidence 8888999999999999999999875 44
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.96 E-value=2.1e-28 Score=273.26 Aligned_cols=355 Identities=27% Similarity=0.336 Sum_probs=243.6
Q ss_pred hhcCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccc
Q 002155 25 AEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTG 104 (959)
Q Consensus 25 ~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 104 (959)
..++++++.++. ..+..|++|+++++++. .+. .++.+++|++|+|++|+|++ +| .++++++|++|++++|++++
T Consensus 29 l~~~~~~~~~~~--~~l~~l~~L~l~~~~I~-~l~-gl~~L~nL~~L~Ls~N~l~~-l~-~l~~L~~L~~L~L~~n~i~~ 102 (384)
T d2omza2 29 LGKTNVTDTVSQ--TDLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTD-IT-PLKNLTKLVDILMNNNQIAD 102 (384)
T ss_dssp TTCSSTTSEECH--HHHTTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC
T ss_pred hCCCCCCCccCH--HHhCCCCEEECCCCCCC-Ccc-ccccCCCCCEEeCcCCcCCC-Cc-cccCCccccccccccccccc
Confidence 334566665553 46778999999999987 453 58899999999999999994 54 39999999999999999997
Q ss_pred cCCcccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCC
Q 002155 105 TIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNA 184 (959)
Q Consensus 105 ~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 184 (959)
.. .++++++|+.|++++|.+.+..+ ......+..+....|.+....+..................+ ..+...
T Consensus 103 i~--~l~~l~~L~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 174 (384)
T d2omza2 103 IT--PLANLTNLTGLTLFNNQITDIDP-LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDL-----KPLANL 174 (384)
T ss_dssp CG--GGTTCTTCCEEECCSSCCCCCGG-GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCC-----GGGTTC
T ss_pred cc--ccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccchh-----hhhccc
Confidence 54 38899999999999998875443 33444567777777777655444444344444333333322 244555
Q ss_pred cCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEc
Q 002155 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVL 264 (959)
Q Consensus 185 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 264 (959)
..........|... ....+..+++++.+++++|.+++..| +..+++|++|++++|+++.. +.+..+++|+.|++
T Consensus 175 ~~~~~~~~~~~~~~--~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l 248 (384)
T d2omza2 175 TTLERLDISSNKVS--DISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDL 248 (384)
T ss_dssp TTCCEEECCSSCCC--CCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred cccccccccccccc--cccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCCc--chhhcccccchhcc
Confidence 66666666666655 34567777888888888888876544 45567788888888887753 45777788888888
Q ss_pred ccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCC
Q 002155 265 SHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLT 344 (959)
Q Consensus 265 s~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 344 (959)
++|.+++. + .++.+++|+.|++++|++++.. .+..++.++
T Consensus 249 ~~n~l~~~--------------~------------------------~~~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~ 288 (384)
T d2omza2 249 ANNQISNL--------------A------------------------PLSGLTKLTELKLGANQISNIS--PLAGLTALT 288 (384)
T ss_dssp CSSCCCCC--------------G------------------------GGTTCTTCSEEECCSSCCCCCG--GGTTCTTCS
T ss_pred ccCccCCC--------------C------------------------cccccccCCEeeccCcccCCCC--ccccccccc
Confidence 87776521 1 1334455555555555555332 355666777
Q ss_pred EEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCcc
Q 002155 345 TLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNE 424 (959)
Q Consensus 345 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 424 (959)
.++++.|.+++. ..+..+.+++.|++++|++++.. .+..+++|++|++++|+|++ ++ .+.++++|++|++++|+
T Consensus 289 ~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~ 362 (384)
T d2omza2 289 NLELNENQLEDI--SPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQ 362 (384)
T ss_dssp EEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSC
T ss_pred cccccccccccc--cccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCCCc
Confidence 777777776642 34666677777777777776543 26677777777777777764 23 57777777777777777
Q ss_pred ccCCCchhhhcccccceEeeccc
Q 002155 425 LDGQLPSSLSNILNLVGLYLQHN 447 (959)
Q Consensus 425 l~~~~~~~l~~l~~L~~L~L~~N 447 (959)
+++..| +.++++|+.|+|++|
T Consensus 363 l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 363 ISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp CCBCGG--GTTCTTCSEEECCCE
T ss_pred CCCChh--hccCCCCCEeeCCCC
Confidence 775433 777777888887776
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.96 E-value=1.4e-28 Score=274.58 Aligned_cols=356 Identities=25% Similarity=0.314 Sum_probs=221.4
Q ss_pred eccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCC
Q 002155 143 DLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFD 222 (959)
Q Consensus 143 ~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~ 222 (959)
.++.+++++.+. ..++.+|++|++++|.|+. + +.++.+++|++|+|++|+|++. + .|+++++|++|++++|.|.
T Consensus 28 ~l~~~~~~~~~~--~~~l~~l~~L~l~~~~I~~-l-~gl~~L~nL~~L~Ls~N~l~~l-~-~l~~L~~L~~L~L~~n~i~ 101 (384)
T d2omza2 28 VLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDI-T-PLKNLTKLVDILMNNNQIA 101 (384)
T ss_dssp HTTCSSTTSEEC--HHHHTTCCEEECCSSCCCC-C-TTGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCC
T ss_pred HhCCCCCCCccC--HHHhCCCCEEECCCCCCCC-c-cccccCCCCCEEeCcCCcCCCC-c-cccCCcccccccccccccc
Confidence 455566665443 3466778888888888873 3 4677888888888888888854 3 3888888888888888888
Q ss_pred ccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCC
Q 002155 223 GIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSY 302 (959)
Q Consensus 223 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~ 302 (959)
++. .++.+++|+.|++++|.+++.. .......+..+....|.+....+...... .........
T Consensus 102 ~i~--~l~~l~~L~~L~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------------~~~~~~~~~- 164 (384)
T d2omza2 102 DIT--PLANLTNLTGLTLFNNQITDID--PLKNLTNLNRLELSSNTISDISALSGLTS------------LQQLSFGNQ- 164 (384)
T ss_dssp CCG--GGTTCTTCCEEECCSSCCCCCG--GGTTCTTCSEEEEEEEEECCCGGGTTCTT------------CSEEEEEES-
T ss_pred ccc--cccccccccccccccccccccc--ccccccccccccccccccccccccccccc------------ccccccccc-
Confidence 543 3788888888888888887653 34566677778777777653211100000 000000000
Q ss_pred CcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccc
Q 002155 303 NRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIP 382 (959)
Q Consensus 303 n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 382 (959)
......+.............|... ....+..+++++.+++++|.+++..| +...++|+.|++++|+++. +
T Consensus 165 ----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~-~- 234 (384)
T d2omza2 165 ----VTDLKPLANLTTLERLDISSNKVS--DISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I- 234 (384)
T ss_dssp ----CCCCGGGTTCTTCCEEECCSSCCC--CCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-
T ss_pred ----cchhhhhccccccccccccccccc--cccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCC-c-
Confidence 011222333334444444444433 34556677777888888887775533 4556677778888777763 2
Q ss_pred cccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhh
Q 002155 383 WSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAA 462 (959)
Q Consensus 383 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 462 (959)
..+..+++|+.|++++|++++.. .+..+++|++|++++|++++. + .+..++.++.+++.+|+++++.. +...
T Consensus 235 ~~l~~l~~L~~L~l~~n~l~~~~--~~~~~~~L~~L~l~~~~l~~~-~-~~~~~~~l~~l~~~~n~l~~~~~--~~~~-- 306 (384)
T d2omza2 235 GTLASLTNLTDLDLANNQISNLA--PLSGLTKLTELKLGANQISNI-S-PLAGLTALTNLELNENQLEDISP--ISNL-- 306 (384)
T ss_dssp GGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCC-G-GGTTCTTCSEEECCSSCCSCCGG--GGGC--
T ss_pred chhhcccccchhccccCccCCCC--cccccccCCEeeccCcccCCC-C-ccccccccccccccccccccccc--cchh--
Confidence 35667777888888888777543 366777778888877777643 2 36667777777777777765432 1111
Q ss_pred hhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEec
Q 002155 463 WKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSL 542 (959)
Q Consensus 463 ~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 542 (959)
..++.|++++|++++.. .+..+++|++|++++|++++ ++ .++++++|++|++++|+|++..| +.++++|+.|+|
T Consensus 307 ~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L 380 (384)
T d2omza2 307 KNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGL 380 (384)
T ss_dssp TTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEEC
T ss_pred cccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeC
Confidence 14555566666655432 25556666666666666652 33 46666666666666666665433 566666666666
Q ss_pred ccC
Q 002155 543 AEN 545 (959)
Q Consensus 543 ~~N 545 (959)
++|
T Consensus 381 ~~N 383 (384)
T d2omza2 381 NDQ 383 (384)
T ss_dssp CCE
T ss_pred CCC
Confidence 665
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.96 E-value=8.8e-29 Score=267.61 Aligned_cols=247 Identities=26% Similarity=0.371 Sum_probs=221.4
Q ss_pred cccEEecCCCcccc--cCCcCccCCCCCcEEEcCC-CcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCcee
Q 002155 43 QMESLLLSSNQFIG--KIPPEIGNCSMLKSISLSN-NFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQL 119 (959)
Q Consensus 43 ~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 119 (959)
+++.|+|++|.+.+ .+|+++++|++|++|+|++ |+++|.+|.+|+++++|++|+|++|++.+..+..+..+.+|+++
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l 130 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhccc
Confidence 68999999999987 5889999999999999987 88998999999999999999999999999999999999999999
Q ss_pred eecccccccccCcccCCC-cccEEeccCCccccccCcccccccce-eEEEccccccccccCccccCCcCCceEeccCCcc
Q 002155 120 VIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETL-MEFSAANNLLEGSLPYEVGNAAALERLVLTNNML 197 (959)
Q Consensus 120 ~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i 197 (959)
++++|.+.+.+|..+..+ .++++++++|.+.+.+|..+..+..+ +.+++++|++++..|..+..+..+ .++++++..
T Consensus 131 ~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~ 209 (313)
T d1ogqa_ 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEE
T ss_pred ccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-ccccccccc
Confidence 999999999999888887 48999999999999999999888776 889999999999999888888665 699999999
Q ss_pred cccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCC
Q 002155 198 KGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKP 277 (959)
Q Consensus 198 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 277 (959)
.+.+|..+..+++|+.+++++|.+.+.+| .++.+++|+.|+|++|++++.+|+.|+.+++|++|+|++|+|+|.+|.
T Consensus 210 ~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-- 286 (313)
T d1ogqa_ 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-- 286 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC--
T ss_pred ccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC--
Confidence 99999999999999999999999986554 688899999999999999988899999999999999999999876663
Q ss_pred cchhhccCCCCccccccccceecCCCc
Q 002155 278 SSYFRQANMPDLSFIQHHGVFDLSYNR 304 (959)
Q Consensus 278 ~~~~~~~~~~~l~~l~~L~~l~L~~n~ 304 (959)
+..+++|+.+++++|+
T Consensus 287 -----------~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 287 -----------GGNLQRFDVSAYANNK 302 (313)
T ss_dssp -----------STTGGGSCGGGTCSSS
T ss_pred -----------cccCCCCCHHHhCCCc
Confidence 3445677778888776
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.94 E-value=2.2e-25 Score=239.68 Aligned_cols=217 Identities=18% Similarity=0.214 Sum_probs=108.4
Q ss_pred cEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeeccc
Q 002155 45 ESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRN 124 (959)
Q Consensus 45 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 124 (959)
+.++=+++++. .+|..+. +++++|+|++|+|+...+.+|.++++|++|++++|.++.+.+.+|.++++|++|++++|
T Consensus 13 ~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n 89 (305)
T d1xkua_ 13 RVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 89 (305)
T ss_dssp TEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCC
Confidence 33444444444 4444432 45555555555555333334555555555555555555555555555555555555555
Q ss_pred ccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccc--cccCccccCCcCCceEeccCCcccccCC
Q 002155 125 HIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLE--GSLPYEVGNAAALERLVLTNNMLKGHLP 202 (959)
Q Consensus 125 ~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 202 (959)
+++...+... ..+..|++++|.+.+..+..+.....+..+....|... ...+..+..+++|+.+++++|.++ .+|
T Consensus 90 ~l~~l~~~~~--~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~-~l~ 166 (305)
T d1xkua_ 90 QLKELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIP 166 (305)
T ss_dssp CCSBCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCC
T ss_pred ccCcCccchh--hhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc-ccC
Confidence 5543222111 13455555555555444444444444444544444322 223344555555555555555555 233
Q ss_pred ccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccC
Q 002155 203 KEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNL 269 (959)
Q Consensus 203 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 269 (959)
..+ .++|+.|++++|.+....+..|..++.++.|++++|++++..+..|.++++|++|+|++|+|
T Consensus 167 ~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L 231 (305)
T d1xkua_ 167 QGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL 231 (305)
T ss_dssp SSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCC
T ss_pred ccc--CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeecccccc
Confidence 222 34555555555555555555555555555555555555555555555555555555555544
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.94 E-value=2.2e-25 Score=239.71 Aligned_cols=274 Identities=23% Similarity=0.290 Sum_probs=180.3
Q ss_pred ccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccC
Q 002155 139 LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNS 218 (959)
Q Consensus 139 L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 218 (959)
.+.+|.++++++. +|..+. +++++|++++|+|+...+.+|.++++|++|++++|.+....|.+|.++++|++|++++
T Consensus 12 ~~~~~C~~~~L~~-lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~ 88 (305)
T d1xkua_ 12 LRVVQCSDLGLEK-VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 88 (305)
T ss_dssp TTEEECTTSCCCS-CCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCCc-cCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccC
Confidence 4556666666663 344432 4566666666666633334566666666666666666655566666666666666666
Q ss_pred CcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccce
Q 002155 219 NLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVF 298 (959)
Q Consensus 219 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l 298 (959)
|+|+. +|..+ ...++.|++++|.+..+.+..+.....++.++...|...
T Consensus 89 n~l~~-l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~---------------------------- 137 (305)
T d1xkua_ 89 NQLKE-LPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLK---------------------------- 137 (305)
T ss_dssp SCCSB-CCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCC----------------------------
T ss_pred CccCc-Cccch--hhhhhhhhccccchhhhhhhhhhcccccccccccccccc----------------------------
Confidence 66663 33222 235666666666666655555555555555555554321
Q ss_pred ecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccC
Q 002155 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLT 378 (959)
Q Consensus 299 ~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 378 (959)
.....+..|..+++|+.+++++|.+.. .|..+ .++|+.|++++|.++
T Consensus 138 ------------------------------~~~~~~~~~~~l~~L~~l~l~~n~l~~-l~~~~--~~~L~~L~l~~n~~~ 184 (305)
T d1xkua_ 138 ------------------------------SSGIENGAFQGMKKLSYIRIADTNITT-IPQGL--PPSLTELHLDGNKIT 184 (305)
T ss_dssp ------------------------------GGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSC--CTTCSEEECTTSCCC
T ss_pred ------------------------------ccCCCccccccccccCccccccCCccc-cCccc--CCccCEEECCCCcCC
Confidence 111334556777788888888888774 33332 467888888888888
Q ss_pred CccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCcccccc
Q 002155 379 GSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFS 458 (959)
Q Consensus 379 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 458 (959)
...+..|..++.++.|++++|.+.+..+.+|.++++|++|+|++|+|+ .+|.+|..+++|+.|+|++|+|+.++...|.
T Consensus 185 ~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~ 263 (305)
T d1xkua_ 185 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFC 263 (305)
T ss_dssp EECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSS
T ss_pred CCChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccCCCEEECCCCccCccChhhcc
Confidence 777788888888888888888888777888888888888888888887 5677888888888888888888877666553
Q ss_pred chhhhhhceeccCCcccCCCCCccccCccccceeeecccccc
Q 002155 459 NSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFT 500 (959)
Q Consensus 459 ~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 500 (959)
. +..+..+.+|+.|+|++|.++
T Consensus 264 ~--------------------~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 264 P--------------------PGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp C--------------------SSCCTTSCCCSEEECCSSSSC
T ss_pred C--------------------cchhcccCCCCEEECCCCcCc
Confidence 2 222334556666666666553
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=1.3e-24 Score=230.79 Aligned_cols=222 Identities=23% Similarity=0.206 Sum_probs=161.9
Q ss_pred EecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeec-ccc
Q 002155 47 LLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIF-RNH 125 (959)
Q Consensus 47 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~-~n~ 125 (959)
++.+++++. .+|..+. +++++|+|++|+|++..+.+|.++++|++|++++|++..+.+..+..++.+..+... .|.
T Consensus 16 v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~ 92 (284)
T d1ozna_ 16 TSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ 92 (284)
T ss_dssp EECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTT
T ss_pred EEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence 455555555 5555432 456666666666665555566666666666666666666666666666666666543 444
Q ss_pred cccccCcccCCC-cccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCcc
Q 002155 126 IYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKE 204 (959)
Q Consensus 126 ~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 204 (959)
+....|..+..+ +|++|++++|.+....+..+...++|+.+++++|.+++..+..|..+++|++|++++|.++...+.+
T Consensus 93 ~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~ 172 (284)
T d1ozna_ 93 LRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERA 172 (284)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTT
T ss_pred cccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhh
Confidence 455555556554 3667777777776666666777777777777777777666677888888888888888888777788
Q ss_pred ccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCC
Q 002155 205 IGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSG 271 (959)
Q Consensus 205 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 271 (959)
|.++++|+++++++|+++++.|..|..+++|++|++++|++.+..+..|..+++|++|++++|.+.+
T Consensus 173 f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 173 FRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred hccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCC
Confidence 8888888888888888888888888888888888888888888888888888888888888888764
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=2.7e-24 Score=228.38 Aligned_cols=250 Identities=24% Similarity=0.249 Sum_probs=139.4
Q ss_pred cCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcc-cccCCCCCchhhhcccCCCeeE
Q 002155 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLG-NNNLSGLIPEKIADLAQLQCLV 263 (959)
Q Consensus 185 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~-~N~l~~~~~~~~~~l~~L~~L~ 263 (959)
+++++|+|++|+|+...+.+|.++++|++|++++|.+..+.+..+..+..++.++.. .|.++.+.+..|+++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 456667777777765555566677777777777777766666666666666666553 4455555566666666666666
Q ss_pred cccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCC
Q 002155 264 LSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNL 343 (959)
Q Consensus 264 Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L 343 (959)
+++|.+. ...+..+...++|
T Consensus 112 l~~n~~~------------------------------------------------------------~~~~~~~~~~~~L 131 (284)
T d1ozna_ 112 LDRCGLQ------------------------------------------------------------ELGPGLFRGLAAL 131 (284)
T ss_dssp CTTSCCC------------------------------------------------------------CCCTTTTTTCTTC
T ss_pred cCCcccc------------------------------------------------------------cccccccchhccc
Confidence 6666543 2223334444555
Q ss_pred CEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCc
Q 002155 344 TTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN 423 (959)
Q Consensus 344 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 423 (959)
+.+++++|+++.+.+..|..+.+|+.|++++|++++..+.+|..+++|+.+++++|+++++.|..|.++++|++|++++|
T Consensus 132 ~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 211 (284)
T d1ozna_ 132 QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211 (284)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred chhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhccccccccc
Confidence 55555555555444455555555555555555555555555555555666666666555555555666666666666666
Q ss_pred cccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeecccccc
Q 002155 424 ELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFT 500 (959)
Q Consensus 424 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 500 (959)
++.+..+..|..+++|+.|++++|++...-+.. .. ...++.+....+.+....|..+.+ ...++++.+.|+
T Consensus 212 ~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~~~--~l-~~~l~~~~~~~~~~~C~~p~~l~g---~~l~~l~~~~l~ 282 (284)
T d1ozna_ 212 NLSALPTEALAPLRALQYLRLNDNPWVCDCRAR--PL-WAWLQKFRGSSSEVPCSLPQRLAG---RDLKRLAANDLQ 282 (284)
T ss_dssp CCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH--HH-HHHHHHCCSEECCCBEEESGGGTT---CBGGGSCGGGSC
T ss_pred ccccccccccccccccCEEEecCCCCCCCccch--HH-HHHHHhCcCCCCceEeCCchHHcC---CccccCCHHHCC
Confidence 666555555666666666666666655321100 00 012344445555555555555543 233344444443
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=6.4e-24 Score=222.73 Aligned_cols=205 Identities=27% Similarity=0.235 Sum_probs=155.2
Q ss_pred cCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccc
Q 002155 338 SRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTH 417 (959)
Q Consensus 338 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 417 (959)
.+...+.+++.+++.++. +|..+. ++++.|+|++|+|++..+..|..+++|++|+|++|+|+.+ + .++.+++|++
T Consensus 7 ~~~~~~~~v~C~~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l-~-~~~~l~~L~~ 81 (266)
T d1p9ag_ 7 SKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-Q-VDGTLPVLGT 81 (266)
T ss_dssp ECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-E-CCSCCTTCCE
T ss_pred cccCCCeEEEccCCCCCe-eCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccc-c-cccccccccc
Confidence 345566667777777774 454442 4677888888888766667778888888888888888743 2 3567788888
Q ss_pred cccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccc
Q 002155 418 LDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHEN 497 (959)
Q Consensus 418 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 497 (959)
|+|++|+++ ..+..+..+++|+.|++++|++.+++. ..+..+.+++.|++++|
T Consensus 82 L~Ls~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~--------------------------~~~~~l~~l~~L~l~~n 134 (266)
T d1p9ag_ 82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPL--------------------------GALRGLGELQELYLKGN 134 (266)
T ss_dssp EECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCS--------------------------STTTTCTTCCEEECTTS
T ss_pred ccccccccc-ccccccccccccccccccccccceeec--------------------------ccccccccccccccccc
Confidence 888888887 456677778888888888877765443 33445677888888888
Q ss_pred cccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccCCCccccccCCCCCCCC
Q 002155 498 KFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 498 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~ 574 (959)
.++...+..+..+++|+.|++++|+|++..+..|..+++|++|+|++|+|+.+++....+..|+.+++.||||.|+|
T Consensus 135 ~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~~~~~~L~~L~L~~Np~~CdC 211 (266)
T d1p9ag_ 135 ELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (266)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred ccceeccccccccccchhcccccccccccCccccccccccceeecccCCCcccChhHCCCCCCCEEEecCCCCCCCc
Confidence 88866667777788888888888888877777888888888888888888877776677788899999999999964
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=2.7e-22 Score=210.15 Aligned_cols=201 Identities=21% Similarity=0.162 Sum_probs=133.3
Q ss_pred CCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEe
Q 002155 64 NCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLD 143 (959)
Q Consensus 64 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ 143 (959)
+.+.+.+.|.++++++ .+|..+. ++|++|+|++|+|+++.+++|.++++|++|+|++|.+... |..-...+|++|+
T Consensus 8 ~~~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l-~~~~~l~~L~~L~ 83 (266)
T d1p9ag_ 8 KVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVDGTLPVLGTLD 83 (266)
T ss_dssp CSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECCSCCTTCCEEE
T ss_pred ccCCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccc-ccccccccccccc
Confidence 3344444455555555 3444332 3455555555555554445555555555555555555432 2222222456666
Q ss_pred ccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCc
Q 002155 144 LDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDG 223 (959)
Q Consensus 144 ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~ 223 (959)
+++|+++. .+..+..+++|+.|++++|.+....+..+..+.++++|++++|.++...+..+..+++|+.|++++|+|++
T Consensus 84 Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~ 162 (266)
T d1p9ag_ 84 LSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (266)
T ss_dssp CCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred cccccccc-cccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccccccc
Confidence 66666653 34556667777777777777776667777788888888888888887777777888888888888888887
Q ss_pred cCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCC
Q 002155 224 IIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 224 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
+.+..|..+++|++|+|++|+|+ .+|+.+..+++|+.|+|++|.+.
T Consensus 163 ~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 163 LPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 77777888888888888888888 45666777888888888888775
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.84 E-value=2.4e-22 Score=198.97 Aligned_cols=168 Identities=16% Similarity=0.109 Sum_probs=119.0
Q ss_pred CCCeeccCCCeEEEEEEcCCCCEEEEEEccccch------------------hhHHHHHHHHHHHhcCCCCceeccccce
Q 002155 683 KTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKT------------------QGHREFTAEMETLGKVKHQNLVPLLGYC 744 (959)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~h~niv~~~~~~ 744 (959)
++++||+|+||+||+|++.+|+.||||+++.... ........|...+.++.|++++..+++.
T Consensus 4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~ 83 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE 83 (191)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence 4688999999999999988899999998653110 1122345688899999999998877543
Q ss_pred ecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEc
Q 002155 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVA 824 (959)
Q Consensus 745 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 824 (959)
..++||||++++...+ ++...+..++.|++++++||| +.||+||||||+|||++++ .++++
T Consensus 84 ----~~~lvme~~~~~~~~~-----------l~~~~~~~i~~ql~~~l~~lH---~~giiHrDiKP~NILv~~~-~~~li 144 (191)
T d1zara2 84 ----GNAVLMELIDAKELYR-----------VRVENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVSEE-GIWII 144 (191)
T ss_dssp ----TTEEEEECCCCEEGGG-----------CCCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEETT-EEEEC
T ss_pred ----CCEEEEEeeccccccc-----------hhhHHHHHHHHHHHHHHHHHh---hCCEEEccCChhheeeeCC-CEEEE
Confidence 3479999998865432 333455689999999999999 8899999999999999865 58999
Q ss_pred ccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHH
Q 002155 825 DFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVIL 873 (959)
Q Consensus 825 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il 873 (959)
|||.|...........- ..+... -.+. ..+.|+.++|+||+.--+
T Consensus 145 DFG~a~~~~~~~~~~~l--~rd~~~-~~~~-f~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 145 DFPQSVEVGEEGWREIL--ERDVRN-IITY-FSRTYRTEKDINSAIDRI 189 (191)
T ss_dssp CCTTCEETTSTTHHHHH--HHHHHH-HHHH-HHHHHCCCCCHHHHHHHH
T ss_pred ECCCcccCCCCCcHHHH--HHHHHH-HHHH-HcCCCCCcccHHHHHHHH
Confidence 99999765422111000 000000 0011 135678899999986544
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.84 E-value=3.3e-19 Score=195.21 Aligned_cols=313 Identities=26% Similarity=0.268 Sum_probs=182.4
Q ss_pred ceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcc
Q 002155 162 TLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLG 241 (959)
Q Consensus 162 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 241 (959)
++++|++++|.++ .+|+. .++|++|+|++|+|+ .+|+.+ .+|+.|++++|.++. ++.. .+.|++|+++
T Consensus 39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~~-l~~l---p~~L~~L~L~ 106 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLKA-LSDL---PPLLEYLGVS 106 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCSC-CCSC---CTTCCEEECC
T ss_pred CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccch-hhhh---cccccccccc
Confidence 5677777777776 55642 456777777777777 456543 467777777777763 2221 1347777777
Q ss_pred cccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccE
Q 002155 242 NNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVD 321 (959)
Q Consensus 242 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~ 321 (959)
+|+++.+ | .++.+++|+.|++++|.+..... . ...+..
T Consensus 107 ~n~l~~l-p-~~~~l~~L~~L~l~~~~~~~~~~-------------------------------------~---~~~l~~ 144 (353)
T d1jl5a_ 107 NNQLEKL-P-ELQNSSFLKIIDVDNNSLKKLPD-------------------------------------L---PPSLEF 144 (353)
T ss_dssp SSCCSSC-C-CCTTCTTCCEEECCSSCCSCCCC-------------------------------------C---CTTCCE
T ss_pred ccccccc-c-chhhhccceeecccccccccccc-------------------------------------c---cccccc
Confidence 7777644 3 24667777777777776642111 1 122233
Q ss_pred EEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcC
Q 002155 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKL 401 (959)
Q Consensus 322 L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i 401 (959)
+.+.++... ....+..++.++.+++++|.+... +.. ....+.+..+++.+. ..+ .+..++.|+.+++++|..
T Consensus 145 l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~~~-~~~---~~~~~~l~~~~~~~~-~~~-~~~~l~~L~~l~l~~n~~ 216 (353)
T d1jl5a_ 145 IAAGNNQLE--ELPELQNLPFLTAIYADNNSLKKL-PDL---PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLL 216 (353)
T ss_dssp EECCSSCCS--SCCCCTTCTTCCEEECCSSCCSSC-CCC---CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCC
T ss_pred hhhcccccc--ccccccccccceeccccccccccc-ccc---ccccccccccccccc-ccc-cccccccccccccccccc
Confidence 333333322 233455566666677776666532 211 223345555555544 222 345666777777777766
Q ss_pred CCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCc
Q 002155 402 SGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPR 481 (959)
Q Consensus 402 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~ 481 (959)
.. .+.. ..++..+.+.+|.+.. .+.. ..++...++..+.+.++..-. ......++..|.+.+
T Consensus 217 ~~-~~~~---~~~l~~~~~~~~~~~~-~~~~---~~~l~~~~~~~~~~~~l~~l~------~~~~~~~~~~~~~~~---- 278 (353)
T d1jl5a_ 217 KT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELP------PNLYYLNASSNEIRS---- 278 (353)
T ss_dssp SS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCC------TTCCEEECCSSCCSE----
T ss_pred cc-cccc---cccccccccccccccc-cccc---ccccccccccccccccccccc------chhcccccccCcccc----
Confidence 52 3332 3345666666666652 2222 234445555555444322110 022344555555442
Q ss_pred cccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccCCCc
Q 002155 482 SLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLS 561 (959)
Q Consensus 482 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~ 561 (959)
....+++|++|+|++|+|+ .+|.. +++|+.|+|++|+|+ .+|+. +++|++|++++|+|+.++... ..++
T Consensus 279 ~~~~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N~L~~lp~~~---~~L~ 347 (353)
T d1jl5a_ 279 LCDLPPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYNPLREFPDIP---ESVE 347 (353)
T ss_dssp ECCCCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCSSCCCCC---TTCC
T ss_pred ccccCCCCCEEECCCCccC-ccccc---cCCCCEEECCCCcCC-ccccc---cCCCCEEECcCCcCCCCCccc---cccC
Confidence 2344678999999999998 67754 578999999999998 45643 568999999999999876432 3455
Q ss_pred cccc
Q 002155 562 KISL 565 (959)
Q Consensus 562 ~l~l 565 (959)
.|.+
T Consensus 348 ~L~~ 351 (353)
T d1jl5a_ 348 DLRM 351 (353)
T ss_dssp EEEC
T ss_pred eeEC
Confidence 5543
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.82 E-value=1.2e-18 Score=190.55 Aligned_cols=313 Identities=26% Similarity=0.282 Sum_probs=214.0
Q ss_pred cccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeec
Q 002155 43 QMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIF 122 (959)
Q Consensus 43 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 122 (959)
++++|||+++++. .+|+. +++|++|+|++|+|+ .+|+.+ .+|++|++++|+++.+. .. .++|++|+++
T Consensus 39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~~l~-~l---p~~L~~L~L~ 106 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLKALS-DL---PPLLEYLGVS 106 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCSCCC-SC---CTTCCEEECC
T ss_pred CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccchhh-hh---cccccccccc
Confidence 6889999999987 78863 578999999999998 777654 68899999999998543 21 1469999999
Q ss_pred ccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCC
Q 002155 123 RNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLP 202 (959)
Q Consensus 123 ~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 202 (959)
+|.+.. +|.......|++|++++|.+....+ ....+..+.+.++... ....+..++.++.|++++|.+.. .+
T Consensus 107 ~n~l~~-lp~~~~l~~L~~L~l~~~~~~~~~~----~~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~~-~~ 178 (353)
T d1jl5a_ 107 NNQLEK-LPELQNSSFLKIIDVDNNSLKKLPD----LPPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLKK-LP 178 (353)
T ss_dssp SSCCSS-CCCCTTCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCSS-CC
T ss_pred cccccc-ccchhhhccceeecccccccccccc----ccccccchhhcccccc--ccccccccccceecccccccccc-cc
Confidence 999874 4554444469999999998874432 2456667777766654 34567788889999999988873 33
Q ss_pred ccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhh
Q 002155 203 KEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFR 282 (959)
Q Consensus 203 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 282 (959)
.. ....+.+....+.+. .++ .+..++.|+.+++++|..... + ....++..+.+.+|.+.....
T Consensus 179 ~~---~~~~~~l~~~~~~~~-~~~-~~~~l~~L~~l~l~~n~~~~~-~---~~~~~l~~~~~~~~~~~~~~~-------- 241 (353)
T d1jl5a_ 179 DL---PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTL-P---DLPPSLEALNVRDNYLTDLPE-------- 241 (353)
T ss_dssp CC---CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSC-C---SCCTTCCEEECCSSCCSCCCC--------
T ss_pred cc---ccccccccccccccc-ccc-ccccccccccccccccccccc-c---ccccccccccccccccccccc--------
Confidence 22 234567777777766 333 467788999999999887643 3 345677888888887753211
Q ss_pred ccCCCCccccccccceecCCCcCCCCCCcccCCc-ccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCc
Q 002155 283 QANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSC-VVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEF 361 (959)
Q Consensus 283 ~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~-~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 361 (959)
....+...++..+.+.+ +..+ ......++..+.+.+. ...+++|++|+|++|+|+. +|.
T Consensus 242 --------~~~~l~~~~~~~~~~~~-----l~~l~~~~~~~~~~~~~~~~~----~~~~~~L~~L~Ls~N~l~~-lp~-- 301 (353)
T d1jl5a_ 242 --------LPQSLTFLDVSENIFSG-----LSELPPNLYYLNASSNEIRSL----CDLPPSLEELNVSNNKLIE-LPA-- 301 (353)
T ss_dssp --------CCTTCCEEECCSSCCSE-----ESCCCTTCCEEECCSSCCSEE----CCCCTTCCEEECCSSCCSC-CCC--
T ss_pred --------ccccccccccccccccc-----cccccchhcccccccCccccc----cccCCCCCEEECCCCccCc-ccc--
Confidence 11223334444443331 1111 2334456666666532 3446889999999999984 554
Q ss_pred CCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccC
Q 002155 362 GDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLS 421 (959)
Q Consensus 362 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 421 (959)
.+++|+.|++++|+|+ .+|.. +++|++|++++|+|+ .+|.... +|+.|.+.
T Consensus 302 -~~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N~L~-~lp~~~~---~L~~L~~~ 352 (353)
T d1jl5a_ 302 -LPPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYNPLR-EFPDIPE---SVEDLRMN 352 (353)
T ss_dssp -CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-SCCCCCT---TCCEEECC
T ss_pred -ccCCCCEEECCCCcCC-ccccc---cCCCCEEECcCCcCC-CCCcccc---ccCeeECc
Confidence 3578999999999998 55543 468999999999998 5565433 45555543
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.77 E-value=6.6e-19 Score=179.43 Aligned_cols=189 Identities=18% Similarity=0.249 Sum_probs=109.7
Q ss_pred CCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCce
Q 002155 39 GNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQ 118 (959)
Q Consensus 39 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 118 (959)
..++.|++|++.+|++. .++ .+..+++|++|+|++|++++.. .+..+++|+.+++++|.++.+ ..+.++++|+.
T Consensus 38 ~~l~~L~~L~l~~~~i~-~l~-~l~~l~~L~~L~ls~n~i~~~~--~l~~l~~l~~l~~~~n~~~~i--~~l~~l~~L~~ 111 (227)
T d1h6ua2 38 ADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLA--PLKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (227)
T ss_dssp HHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCG--GGTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHcCCcCEEECCCCCCC-cch-hHhcCCCCcEeecCCceeeccc--ccccccccccccccccccccc--ccccccccccc
Confidence 34445555555555554 332 2555555555555555555322 145555555555555555432 13444455555
Q ss_pred eeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCccc
Q 002155 119 LVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLK 198 (959)
Q Consensus 119 L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 198 (959)
+.++++ ...+. ..+...+.+..+.+.++.+... ..+.+.++|++|++++|.+.
T Consensus 112 l~l~~~-----------------------~~~~~--~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~ 164 (227)
T d1h6ua2 112 LDLTST-----------------------QITDV--TPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVS 164 (227)
T ss_dssp EECTTS-----------------------CCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCC
T ss_pred cccccc-----------------------ccccc--chhccccchhhhhchhhhhchh--hhhccccccccccccccccc
Confidence 544444 44322 2234445555556655555422 23566777778888777776
Q ss_pred ccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEccc
Q 002155 199 GHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSH 266 (959)
Q Consensus 199 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 266 (959)
+. ..+.++++|++|+|++|+++++ + .++++++|++|+|++|+++++. .+.++++|+.|++++
T Consensus 165 ~~--~~l~~l~~L~~L~Ls~n~l~~l-~-~l~~l~~L~~L~Ls~N~lt~i~--~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 165 DL--TPLANLSKLTTLKADDNKISDI-S-PLASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTN 226 (227)
T ss_dssp CC--GGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEE
T ss_pred cc--hhhcccccceecccCCCccCCC-h-hhcCCCCCCEEECcCCcCCCCc--ccccCCCCCEEEeeC
Confidence 42 3477788888888888887753 2 3777888888888888887653 377888888888763
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=1.7e-18 Score=178.41 Aligned_cols=218 Identities=14% Similarity=0.113 Sum_probs=142.2
Q ss_pred cEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCcccccc-CCcccccCCCCceeeecc
Q 002155 45 ESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGT-IEGVFEKCSNLSQLVIFR 123 (959)
Q Consensus 45 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~ 123 (959)
+.++.++++++ .+|+.+- +++++|||++|+|+...+.+|.++++|++|++++|.+... .+++|..+++++++.+..
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 45666666665 6665442 4677777777777744445677777777777777776643 455677777777777653
Q ss_pred -cccccccCcccCCC-cccEEeccCCccccccCcc-cccccceeEEEccccccccccCccccCCc-CCceEeccCCcccc
Q 002155 124 -NHIYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVS-IWNSETLMEFSAANNLLEGSLPYEVGNAA-ALERLVLTNNMLKG 199 (959)
Q Consensus 124 -n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~L~~n~i~~ 199 (959)
|.+....+..+..+ +|++|++++|++....+.. +..+..+..+...++.+....+..|.+++ .++.|++++|+++.
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~ 167 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 167 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred cccccccccccccccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeecccccccc
Confidence 45555566666555 3777777777776443332 33456666666667677655556666654 67778888888875
Q ss_pred cCCccccCCCCCC-EEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEccc
Q 002155 200 HLPKEIGNLSALS-VLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSH 266 (959)
Q Consensus 200 ~~~~~~~~l~~L~-~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 266 (959)
..+..|. ..+++ .+++++|.++.+.+..|.++++|++|+|++|+|+.+.+..|.++++|+.|++.+
T Consensus 168 i~~~~~~-~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 168 IHNCAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp ECTTTTT-TCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEES
T ss_pred ccccccc-chhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcCCC
Confidence 4444443 44443 445677778766666678888888888888888876666677777777766654
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.76 E-value=8.9e-19 Score=178.47 Aligned_cols=83 Identities=22% Similarity=0.348 Sum_probs=48.9
Q ss_pred ccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCC
Q 002155 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQ 260 (959)
Q Consensus 181 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 260 (959)
++.+.+|+.|++.+|.|+. + +.+..+++|++|++++|.|++..| +..+++|+++++++|.++.+ +.++.+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l-~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~i--~~l~~l~~L~ 110 (227)
T d1h6ua2 37 QADLDGITTLSAFGTGVTT-I-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIK 110 (227)
T ss_dssp HHHHHTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCC
T ss_pred HHHcCCcCEEECCCCCCCc-c-hhHhcCCCCcEeecCCceeecccc--cccccccccccccccccccc--cccccccccc
Confidence 3455666666666666663 3 346666666666666666654332 56666666666666666543 3455666666
Q ss_pred eeEcccccC
Q 002155 261 CLVLSHNNL 269 (959)
Q Consensus 261 ~L~Ls~N~l 269 (959)
.+++++|..
T Consensus 111 ~l~l~~~~~ 119 (227)
T d1h6ua2 111 TLDLTSTQI 119 (227)
T ss_dssp EEECTTSCC
T ss_pred ccccccccc
Confidence 666665554
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=4.3e-18 Score=175.43 Aligned_cols=219 Identities=16% Similarity=0.141 Sum_probs=134.5
Q ss_pred EEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCcc-CCccccCCCCCCEEEccc-c
Q 002155 166 FSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGI-IPYELGDCISLTTLDLGN-N 243 (959)
Q Consensus 166 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~L~~-N 243 (959)
++.+++.++ .+|..+. +++++|+|++|+|+...+.+|.++++|++|++++|.+... .+.+|.+++++++|++.. |
T Consensus 13 i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n 89 (242)
T d1xwdc1 13 FLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 89 (242)
T ss_dssp EEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCT
T ss_pred EEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccc
Confidence 334444444 4443332 4677777777777755555677788888888888877643 355677777888877654 5
Q ss_pred cCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEE
Q 002155 244 NLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLL 323 (959)
Q Consensus 244 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~ 323 (959)
++....+..|..+++|+.|++++|.+....+ ...+..+..+..+.
T Consensus 90 ~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~-----------------------------------~~~~~~l~~l~~~~ 134 (242)
T d1xwdc1 90 NLLYINPEAFQNLPNLQYLLISNTGIKHLPD-----------------------------------VHKIHSLQKVLLDI 134 (242)
T ss_dssp TCCEECTTSEECCTTCCEEEEESCCCCSCCC-----------------------------------CTTTCBSSCEEEEE
T ss_pred cccccccccccccccccccccchhhhccccc-----------------------------------cccccccccccccc
Confidence 6766667777888888888888777642110 01122233444445
Q ss_pred ccCCcCcccCCccccCCC-CCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCC
Q 002155 324 LNNNMLSGKIPGSLSRLT-NLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLS 402 (959)
Q Consensus 324 L~~n~i~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~ 402 (959)
..++.+..+.+..|..++ .++.|++++|+++.+.+..|.....++.+++++|+++...+..|.++++|++|++++|+|+
T Consensus 135 ~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~ 214 (242)
T d1xwdc1 135 QDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 214 (242)
T ss_dssp ESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCC
T ss_pred ccccccccccccccccccccceeeecccccccccccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCC
Confidence 555555555555565553 6677777777777554444433322333345666676554555677777777777777777
Q ss_pred CCCCCccCCcccccccccCC
Q 002155 403 GKVPTSFGNLKELTHLDLSF 422 (959)
Q Consensus 403 ~~~~~~~~~l~~L~~L~L~~ 422 (959)
.+.+..|.++++|+.+++.+
T Consensus 215 ~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 215 SLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp CCCSSSCTTCCEEESSSEES
T ss_pred ccCHHHHcCCcccccCcCCC
Confidence 65566677777777766543
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=1.7e-21 Score=221.97 Aligned_cols=382 Identities=19% Similarity=0.137 Sum_probs=189.8
Q ss_pred cccEEeccCCcccccc-CcccccccceeEEEcccccccc----ccCccccCCcCCceEeccCCcccccC----Ccccc-C
Q 002155 138 PLMVLDLDSNNFTGII-PVSIWNSETLMEFSAANNLLEG----SLPYEVGNAAALERLVLTNNMLKGHL----PKEIG-N 207 (959)
Q Consensus 138 ~L~~L~ls~n~l~~~~-p~~~~~~~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~L~~n~i~~~~----~~~~~-~ 207 (959)
+|++||+++|++++.. ...+..+++++.|+|++|.++. .+...+...++|++|+|++|.|+... .+.+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 3566666666665432 2224455666667777776652 33444566777777777777775321 22222 2
Q ss_pred CCCCCEEEccCCcCCcc----CCccccCCCCCCEEEcccccCCCCCchhhhc-c----cCCCeeEcccccCCCCCCCCCc
Q 002155 208 LSALSVLDLNSNLFDGI----IPYELGDCISLTTLDLGNNNLSGLIPEKIAD-L----AQLQCLVLSHNNLSGPIPSKPS 278 (959)
Q Consensus 208 l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l----~~L~~L~Ls~N~l~~~~~~~~~ 278 (959)
..+|++|+|++|.++.. ++..+..+++|++|+|++|+++......+.. + ............+. .
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~-------~ 155 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLS-------A 155 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCB-------G
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccc-------h
Confidence 24677777777777643 3445666777777777777765332222211 1 11112222211111 0
Q ss_pred chhhccCCCCccccccccceecCCCcCCCCC----Cccc-CCcccccEEEccCCcCccc----CCccccCCCCCCEEEcc
Q 002155 279 SYFRQANMPDLSFIQHHGVFDLSYNRLSGPI----PEEL-GSCVVVVDLLLNNNMLSGK----IPGSLSRLTNLTTLDLS 349 (959)
Q Consensus 279 ~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~----p~~~-~~~~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~Ls 349 (959)
... ......+.....++.++++.+.+.... ...+ ........+.+..+.+... ....+...+.++.++++
T Consensus 156 ~~~-~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~ 234 (460)
T d1z7xw1 156 ASC-EPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALG 234 (460)
T ss_dssp GGH-HHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECC
T ss_pred hhh-cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchh
Confidence 000 000011122233344455444432100 0000 1112334555555554321 11234456677777777
Q ss_pred CCCCCC-----CCCCCcCCCCcceEEEeeCcccCCcc----ccccccCCCCcEEEccCCcCCCCCCCcc-----CCcccc
Q 002155 350 RNQLTG-----PIPSEFGDSIKLQGLYLGNNQLTGSI----PWSLGSLGGLVKLNLTGNKLSGKVPTSF-----GNLKEL 415 (959)
Q Consensus 350 ~n~l~~-----~~~~~~~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~L~~N~i~~~~~~~~-----~~l~~L 415 (959)
+|++.. ..+..+.....++.+++++|.+.... ...+...+.++.+++++|.++......+ .....|
T Consensus 235 ~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L 314 (460)
T d1z7xw1 235 SNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQL 314 (460)
T ss_dssp SSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCC
T ss_pred hccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhcccccccccc
Confidence 776532 11222334556777777777665322 2234456677777777777653211111 123456
Q ss_pred cccccCCccccCCCchh----hhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCcccc-Cccccc
Q 002155 416 THLDLSFNELDGQLPSS----LSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLG-NLSYLT 490 (959)
Q Consensus 416 ~~L~L~~N~l~~~~~~~----l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~-~l~~L~ 490 (959)
+.+++++|.++...... +...++|++|+|++|+|+...... ++..+. ..+.|+
T Consensus 315 ~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~----------------------l~~~l~~~~~~L~ 372 (460)
T d1z7xw1 315 ESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRE----------------------LCQGLGQPGSVLR 372 (460)
T ss_dssp CEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHH----------------------HHHHHTSTTCCCC
T ss_pred ccccccccchhhhhhhhcccccccccchhhhheeeecccCcccch----------------------hhhhhhcccCCCC
Confidence 77777777666433222 334456777777777665321111 112221 244577
Q ss_pred eeeecccccccc----CCcCCcCCCCCcEEeCCCCcCCCCCCcccc-----CCCCccEEecccCcCcc
Q 002155 491 NLDLHENKFTGE----IPPDLGNLMQLEYLDVSRNRLCGQIPETMC-----SLSNLLYLSLAENRLEG 549 (959)
Q Consensus 491 ~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~l~~N~l~~ 549 (959)
+|+|++|+|+.. ++..+...++|++|||++|+|+......+. +...|+.|++.+|.+..
T Consensus 373 ~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~ 440 (460)
T d1z7xw1 373 VLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 440 (460)
T ss_dssp EEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred EEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCH
Confidence 777777777532 333445567777777777777643222221 23357777777777653
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=1.2e-20 Score=214.90 Aligned_cols=385 Identities=18% Similarity=0.146 Sum_probs=212.3
Q ss_pred cceeEEEcccccccccc-CccccCCcCCceEeccCCcccc----cCCccccCCCCCCEEEccCCcCCccC----Ccccc-
Q 002155 161 ETLMEFSAANNLLEGSL-PYEVGNAAALERLVLTNNMLKG----HLPKEIGNLSALSVLDLNSNLFDGII----PYELG- 230 (959)
Q Consensus 161 ~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~L~~n~i~~----~~~~~~~~l~~L~~L~L~~N~i~~~~----~~~~~- 230 (959)
++|++|+++.|++++.. .+-+..+++++.|+|++|.|+. .++..+..+++|++|||++|.|+... ...+.
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence 57999999999998533 4556788999999999999984 33456788999999999999996432 22222
Q ss_pred CCCCCCEEEcccccCCCC----CchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCC
Q 002155 231 DCISLTTLDLGNNNLSGL----IPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLS 306 (959)
Q Consensus 231 ~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~ 306 (959)
...+|++|+|++|+++.. ++..+..+++|++|+|++|.++..-.. ...... ... .............+.
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~---~l~~~l--~~~--~~~~~~~~~~~~~~~ 154 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQ---LLCEGL--LDP--QCRLEKLQLEYCSLS 154 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHH---HHHHHH--TST--TCCCCEEECTTSCCB
T ss_pred CCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhh---hhhhcc--ccc--ccccccccccccccc
Confidence 235799999999999854 345677889999999999987521000 000000 000 000001111111110
Q ss_pred CCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCC----CCc-CCCCcceEEEeeCcccCCc-
Q 002155 307 GPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIP----SEF-GDSIKLQGLYLGNNQLTGS- 380 (959)
Q Consensus 307 ~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~----~~~-~~l~~L~~L~L~~n~l~~~- 380 (959)
. .... .....+.....++.++++++....... ..+ ........+.+..+.+...
T Consensus 155 ~---~~~~-----------------~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~ 214 (460)
T d1z7xw1 155 A---ASCE-----------------PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDN 214 (460)
T ss_dssp G---GGHH-----------------HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTH
T ss_pred h---hhhc-----------------ccccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence 0 0000 001112233444444444443321000 000 0111233444444443311
Q ss_pred ---cccccccCCCCcEEEccCCcCCCC-----CCCccCCcccccccccCCccccCC----CchhhhcccccceEeecccc
Q 002155 381 ---IPWSLGSLGGLVKLNLTGNKLSGK-----VPTSFGNLKELTHLDLSFNELDGQ----LPSSLSNILNLVGLYLQHNK 448 (959)
Q Consensus 381 ---~~~~~~~l~~L~~L~L~~N~i~~~-----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~N~ 448 (959)
....+...+.++.+++++|.+... ....+.....++.+++++|.+... ....+...+.++.+++++|.
T Consensus 215 ~~~~~~~l~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~ 294 (460)
T d1z7xw1 215 CRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNE 294 (460)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCC
T ss_pred hhcccccccccccccccchhhccccccccchhhccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 111223445555555555554311 112223334556666666655421 11233445566666666666
Q ss_pred ccCCccccccch---hhhhhceeccCCcccCCCCC----ccccCccccceeeecccccccc----CCcCCc-CCCCCcEE
Q 002155 449 LSGPVDELFSNS---AAWKIATMNMSNNLFDGGLP----RSLGNLSYLTNLDLHENKFTGE----IPPDLG-NLMQLEYL 516 (959)
Q Consensus 449 l~~~~~~~~~~~---~~~~l~~L~ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~-~l~~L~~L 516 (959)
++......+... ....++.+++++|.++.... ..+...++|++|+|++|++++. ++..+. ..+.|++|
T Consensus 295 i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L 374 (460)
T d1z7xw1 295 LGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVL 374 (460)
T ss_dssp CHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEE
T ss_pred ccccccchhhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEE
Confidence 543222111110 11245566666666554322 2334566899999999999753 333333 45779999
Q ss_pred eCCCCcCCCC----CCccccCCCCccEEecccCcCcccCCCC------cccCCCccccccCCCCCC
Q 002155 517 DVSRNRLCGQ----IPETMCSLSNLLYLSLAENRLEGMVPRS------GICQNLSKISLTGNKDLC 572 (959)
Q Consensus 517 ~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~~~------~~~~~l~~l~l~~N~~~c 572 (959)
+|++|+|+.. +++.+...++|++|+|++|+++...... .....|+.+.+.+|.+..
T Consensus 375 ~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~ 440 (460)
T d1z7xw1 375 WLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 440 (460)
T ss_dssp ECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred ECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCH
Confidence 9999999753 3445667899999999999997421110 112358899999987653
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.71 E-value=1.3e-17 Score=167.12 Aligned_cols=81 Identities=30% Similarity=0.384 Sum_probs=51.8
Q ss_pred cccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCC
Q 002155 180 EVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQL 259 (959)
Q Consensus 180 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 259 (959)
.+..+++++.+++++|.+++ +..+..+++|+++++++|.++++. .++++++|++|+|++|+|+.+ + .|..+++|
T Consensus 129 ~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i~--~l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L 202 (210)
T d1h6ta2 129 GLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDIV--PLAGLTKLQNLYLSKNHISDL-R-ALAGLKNL 202 (210)
T ss_dssp GGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCBC-G-GGTTCTTC
T ss_pred cccccccccccccccccccc--cccccccccccccccccccccccc--cccCCCCCCEEECCCCCCCCC-h-hhcCCCCC
Confidence 34556666666666666663 334566677777777777776432 266677777777777777643 3 46777777
Q ss_pred CeeEccc
Q 002155 260 QCLVLSH 266 (959)
Q Consensus 260 ~~L~Ls~ 266 (959)
++|+|++
T Consensus 203 ~~L~Ls~ 209 (210)
T d1h6ta2 203 DVLELFS 209 (210)
T ss_dssp SEEEEEE
T ss_pred CEEEccC
Confidence 7777653
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.70 E-value=1.2e-17 Score=164.88 Aligned_cols=182 Identities=21% Similarity=0.237 Sum_probs=127.3
Q ss_pred ceEEEeeCcccCCccccccccCCCCcEEEccCCcCCC-CCCCccCCcccccccccCCccccCCCchhhhcccccceEeec
Q 002155 367 LQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSG-KVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQ 445 (959)
Q Consensus 367 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 445 (959)
.+.++.++++++ .+|..+. +++++|+|++|+|++ ..+..|.++++|++|+|++|.+....+..+..+++|+.|+|+
T Consensus 10 ~~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls 86 (192)
T d1w8aa_ 10 GTTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeec
Confidence 346777777777 4554442 467777777777764 335556667777777777777776666667777777777777
Q ss_pred cccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCC
Q 002155 446 HNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCG 525 (959)
Q Consensus 446 ~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 525 (959)
+|+|+.+ .|.+|.++++|++|+|++|+|++..|.+|..+++|++|+|++|.+..
T Consensus 87 ~N~l~~l--------------------------~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~ 140 (192)
T d1w8aa_ 87 ENKIKEI--------------------------SNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp SCCCCEE--------------------------CSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred ccccccc--------------------------CHHHHhCCCcccccccCCccccccCHHHhcCCccccccccccccccc
Confidence 7666644 44566778899999999999998888889999999999999999875
Q ss_pred CCCccccCCCCccEEecccCcCcccCCCCcccCCCccccccCCCCCCCCCCCCCc
Q 002155 526 QIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNC 580 (959)
Q Consensus 526 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~~~~~~c 580 (959)
..+ ...-...++.+.+..|.+++..|.. +.+++.+++..|...|.++-...|
T Consensus 141 ~~~-~~~~~~~l~~~~l~~~~~~c~~p~~--l~~~~l~~L~~n~l~C~~~~~~g~ 192 (192)
T d1w8aa_ 141 NCH-LAWFAEWLRKKSLNGGAARCGAPSK--VRDVQIKDLPHSEFKCSSENSEGC 192 (192)
T ss_dssp SGG-GHHHHHHHHHHCCSGGGCBBCSSTT--TTTSBGGGSCTTTCCCCCC---CC
T ss_pred ccc-hHHHhhhhhhhcccCCCeEeCCChh--hcCCEeeecCHhhCcCCCCCCCCC
Confidence 432 2222234667778888888766643 567778889999988876544443
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.70 E-value=2.9e-17 Score=163.06 Aligned_cols=179 Identities=20% Similarity=0.306 Sum_probs=102.5
Q ss_pred cEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeeccc
Q 002155 45 ESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRN 124 (959)
Q Consensus 45 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 124 (959)
..+.++.+++.+.++ ...+.++++|++++|.++ .++ .+..+++|++|++++|++++..+ ++++++|++|++++|
T Consensus 21 i~~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~-~l~-~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n 94 (199)
T d2omxa2 21 MKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNN 94 (199)
T ss_dssp HHHHTTCSSTTSEEC--HHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred HHHHhCCCCCCCccC--HHHhcCCCEEECCCCCCC-Ccc-ccccCCCcCcCccccccccCccc--ccCCccccccccccc
Confidence 334455555443222 235566666666666665 332 35566666666666666664332 556666666666555
Q ss_pred ccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCcc
Q 002155 125 HIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKE 204 (959)
Q Consensus 125 ~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 204 (959)
.+.... . +.+++.|+.|++++|.+.. ...+..+++|+.|++++|++.. + +.
T Consensus 95 ~~~~~~-~------------------------l~~l~~L~~L~l~~~~~~~--~~~~~~l~~L~~L~l~~n~l~~-~-~~ 145 (199)
T d2omxa2 95 QIADIT-P------------------------LANLTNLTGLTLFNNQITD--IDPLKNLTNLNRLELSSNTISD-I-SA 145 (199)
T ss_dssp CCCCCG-G------------------------GTTCTTCSEEECCSSCCCC--CGGGTTCTTCSEEECCSSCCCC-C-GG
T ss_pred cccccc-c------------------------ccccccccccccccccccc--ccccchhhhhHHhhhhhhhhcc-c-cc
Confidence 544211 1 2223333333333333321 1235566777777777777763 2 35
Q ss_pred ccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCee
Q 002155 205 IGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCL 262 (959)
Q Consensus 205 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 262 (959)
+..+++|+.|++++|++++.. .++++++|++|++++|+++++ +.++.+++|++|
T Consensus 146 l~~~~~L~~L~l~~n~l~~l~--~l~~l~~L~~L~ls~N~i~~i--~~l~~L~~L~~L 199 (199)
T d2omxa2 146 LSGLTSLQQLNFSSNQVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESL 199 (199)
T ss_dssp GTTCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEE
T ss_pred ccccccccccccccccccCCc--cccCCCCCCEEECCCCCCCCC--ccccCCCCCCcC
Confidence 777777777777777777432 367777777777777777754 346777777765
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.69 E-value=1.1e-16 Score=160.15 Aligned_cols=81 Identities=27% Similarity=0.399 Sum_probs=48.0
Q ss_pred CCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCee
Q 002155 183 NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCL 262 (959)
Q Consensus 183 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 262 (959)
.+.+|++|++++|.|+.. ..+..+++|++|+|++|.|+++. .++.+++|++|++++|+++++ + .+..+++|+.|
T Consensus 44 ~L~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L 117 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDENKVKDL-S-SLKDLKKLKSL 117 (210)
T ss_dssp HHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCG-G-GGTTCTTCCEE
T ss_pred HhcCccEEECcCCCCCCc--hhHhhCCCCCEEeCCCccccCcc--ccccCcccccccccccccccc-c-ccccccccccc
Confidence 355666666666666632 23556666666666666666432 245666666666666666643 2 45666666666
Q ss_pred EcccccC
Q 002155 263 VLSHNNL 269 (959)
Q Consensus 263 ~Ls~N~l 269 (959)
++++|.+
T Consensus 118 ~l~~~~~ 124 (210)
T d1h6ta2 118 SLEHNGI 124 (210)
T ss_dssp ECTTSCC
T ss_pred ccccccc
Confidence 6666654
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.68 E-value=6.3e-17 Score=160.54 Aligned_cols=81 Identities=21% Similarity=0.378 Sum_probs=40.5
Q ss_pred CCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCee
Q 002155 183 NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCL 262 (959)
Q Consensus 183 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 262 (959)
.+.++++|++++|.|+. + +.+..+++|++|++++|+|++..| ++++++|++|++++|.+... ..++++++|+.|
T Consensus 38 ~l~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L 111 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADI--TPLANLTNLTGL 111 (199)
T ss_dssp HHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEE
T ss_pred HhcCCCEEECCCCCCCC-c-cccccCCCcCcCccccccccCccc--ccCCcccccccccccccccc--cccccccccccc
Confidence 34455555555555552 2 234555555555555555553222 55555555555555555433 124555555555
Q ss_pred EcccccC
Q 002155 263 VLSHNNL 269 (959)
Q Consensus 263 ~Ls~N~l 269 (959)
++++|.+
T Consensus 112 ~l~~~~~ 118 (199)
T d2omxa2 112 TLFNNQI 118 (199)
T ss_dssp ECCSSCC
T ss_pred ccccccc
Confidence 5555443
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.68 E-value=6.4e-17 Score=159.50 Aligned_cols=171 Identities=27% Similarity=0.369 Sum_probs=82.9
Q ss_pred ceecCCCcCCCCCCcccCCcccccEEEccCCcCcc-cCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCc
Q 002155 297 VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSG-KIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNN 375 (959)
Q Consensus 297 ~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 375 (959)
.++.++++++ .+|..+. +.+++|+|++|+|+. ..+..|.++++|+.|+|++|.+....+..|..+++|++|+|++|
T Consensus 12 ~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N 88 (192)
T d1w8aa_ 12 TVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence 3555555555 3343332 344555555555543 23344455555555555555555444445555555555555555
Q ss_pred ccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccc
Q 002155 376 QLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDE 455 (959)
Q Consensus 376 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 455 (959)
+|+...+.+|.++++|++|+|++|+|+++.+.+ |..+++|++|+|++|++......
T Consensus 89 ~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~------------------------f~~l~~L~~l~L~~N~~~~~~~~ 144 (192)
T d1w8aa_ 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGS------------------------FEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTS------------------------STTCTTCCEEECTTCCBCCSGGG
T ss_pred cccccCHHHHhCCCcccccccCCccccccCHHH------------------------hcCCcccccccccccccccccch
Confidence 555444444444444444444444444444444 44444555555555544433221
Q ss_pred cccchhhhhhceeccCCcccCCCCCccccCccccceeeecccccc
Q 002155 456 LFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFT 500 (959)
Q Consensus 456 ~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 500 (959)
.+- . ..+..+.+..|.++...|..+ ..++.++|+.|.++
T Consensus 145 ~~~-~--~~l~~~~l~~~~~~c~~p~~l---~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 145 AWF-A--EWLRKKSLNGGAARCGAPSKV---RDVQIKDLPHSEFK 183 (192)
T ss_dssp HHH-H--HHHHHHCCSGGGCBBCSSTTT---TTSBGGGSCTTTCC
T ss_pred HHH-h--hhhhhhcccCCCeEeCCChhh---cCCEeeecCHhhCc
Confidence 110 0 123344555555555555443 44556777777775
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.51 E-value=2e-15 Score=163.98 Aligned_cols=238 Identities=19% Similarity=0.167 Sum_probs=149.3
Q ss_pred CCCcccCCCccccEEecCCCcccc----cCCcCccCCCCCcEEEcCCCcCCCC----------CCcccCCCCCCcEEEcc
Q 002155 33 SLPSWLGNWNQMESLLLSSNQFIG----KIPPEIGNCSMLKSISLSNNFLSGS----------IPRELCTSESLEEIDLD 98 (959)
Q Consensus 33 ~lp~~~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~Ls~n~l~~~----------~p~~~~~l~~L~~L~L~ 98 (959)
.+...+.+.+.|+.|+|++|.+.. .+...+...++|+.|++++|..... +...+...++|++|+|+
T Consensus 22 ~l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~ 101 (344)
T d2ca6a1 22 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 101 (344)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccc
Confidence 345556677889999999998743 3455677889999999998866522 22345667889999999
Q ss_pred Ccccccc----CCcccccCCCCceeeecccccccccCcc--------------cCCCcccEEeccCCccccccC----cc
Q 002155 99 GNLLTGT----IEGVFEKCSNLSQLVIFRNHIYGSIPEY--------------LSKLPLMVLDLDSNNFTGIIP----VS 156 (959)
Q Consensus 99 ~n~l~~~----~~~~~~~l~~L~~L~L~~n~~~~~~p~~--------------~~~~~L~~L~ls~n~l~~~~p----~~ 156 (959)
+|.+... +...+..+++|++|++++|.+....... .....|+.+++++|++....- ..
T Consensus 102 ~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~ 181 (344)
T d2ca6a1 102 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 181 (344)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred ccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccch
Confidence 9988754 3345567889999999988764321111 122247777888777653322 22
Q ss_pred cccccceeEEEccccccccc-----cCccccCCcCCceEeccCCccccc----CCccccCCCCCCEEEccCCcCCccCCc
Q 002155 157 IWNSETLMEFSAANNLLEGS-----LPYEVGNAAALERLVLTNNMLKGH----LPKEIGNLSALSVLDLNSNLFDGIIPY 227 (959)
Q Consensus 157 ~~~~~~L~~L~l~~n~l~~~-----~~~~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~N~i~~~~~~ 227 (959)
+...+.|++|++++|.+... +...+...++|+.|+|++|.++.. +...+...++|++|+|++|.|+.....
T Consensus 182 l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~ 261 (344)
T d2ca6a1 182 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 261 (344)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred hhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhH
Confidence 34456777777777776531 234456667777777777776532 334456667777777777777643222
Q ss_pred cc----cC--CCCCCEEEcccccCCCCC----chhhh-cccCCCeeEcccccCC
Q 002155 228 EL----GD--CISLTTLDLGNNNLSGLI----PEKIA-DLAQLQCLVLSHNNLS 270 (959)
Q Consensus 228 ~~----~~--l~~L~~L~L~~N~l~~~~----~~~~~-~l~~L~~L~Ls~N~l~ 270 (959)
.+ .. .+.|++|++++|+|+... ...+. +.++|+.|+|++|++.
T Consensus 262 ~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~ 315 (344)
T d2ca6a1 262 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 315 (344)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred HHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCC
Confidence 22 22 245777777777765322 22222 4566777777777664
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=6.3e-15 Score=154.66 Aligned_cols=88 Identities=20% Similarity=0.238 Sum_probs=43.8
Q ss_pred cccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCC-cCCccC-CccccCCCCCCEEEcccc-cCCCC-Cchhhhc
Q 002155 180 EVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSN-LFDGII-PYELGDCISLTTLDLGNN-NLSGL-IPEKIAD 255 (959)
Q Consensus 180 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N-~i~~~~-~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~ 255 (959)
.+..+++|++|+|++|.+++..+..++.+++|++|++++| .++... ...+.++++|++|++++| .++.. ....+..
T Consensus 66 l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~ 145 (284)
T d2astb2 66 ILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAH 145 (284)
T ss_dssp HHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHH
T ss_pred HHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhcc
Confidence 3455566666666666665555555666666666666663 343211 112334566666666664 33311 1112222
Q ss_pred -ccCCCeeEcccc
Q 002155 256 -LAQLQCLVLSHN 267 (959)
Q Consensus 256 -l~~L~~L~Ls~N 267 (959)
.++|+.|+++++
T Consensus 146 ~~~~L~~L~l~~~ 158 (284)
T d2astb2 146 VSETITQLNLSGY 158 (284)
T ss_dssp SCTTCCEEECCSC
T ss_pred cccccchhhhccc
Confidence 245666666543
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=2e-14 Score=136.24 Aligned_cols=127 Identities=19% Similarity=0.051 Sum_probs=74.8
Q ss_pred cCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCE
Q 002155 134 LSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSV 213 (959)
Q Consensus 134 ~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 213 (959)
.....+++|+|++|+|+.+ +..+..+++|+.|++++|.|+ .+ +.|..+++|++|++++|+|+...+..+..+++|+.
T Consensus 15 ~n~~~lr~L~L~~n~I~~i-~~~~~~l~~L~~L~Ls~N~i~-~l-~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~ 91 (162)
T d1a9na_ 15 TNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIR-KL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 91 (162)
T ss_dssp ECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCC-EE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred cCcCcCcEEECCCCCCCcc-CccccccccCCEEECCCCCCC-cc-CCcccCcchhhhhcccccccCCCcccccccccccc
Confidence 3334455566666666543 444455566666666666665 23 24666667777777777776544444556667777
Q ss_pred EEccCCcCCccCC-ccccCCCCCCEEEcccccCCCCC---chhhhcccCCCeeE
Q 002155 214 LDLNSNLFDGIIP-YELGDCISLTTLDLGNNNLSGLI---PEKIADLAQLQCLV 263 (959)
Q Consensus 214 L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~l~~L~~L~ 263 (959)
|++++|.|+.... ..+..+++|++|++++|+++... +..++.+++|+.||
T Consensus 92 L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 92 LILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp EECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred ceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence 7777777663321 34666677777777777665432 12466666776665
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.48 E-value=7.8e-14 Score=125.43 Aligned_cols=118 Identities=23% Similarity=0.253 Sum_probs=70.5
Q ss_pred cEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCC
Q 002155 140 MVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSN 219 (959)
Q Consensus 140 ~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N 219 (959)
++|+|++|+++.. + .+..+++|++|++++|+|+ .+|..|+.+++|+.|++++|+|+. +| .+..+++|++|++++|
T Consensus 1 R~L~Ls~n~l~~l-~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLTVL-C-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCSSC-C-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCCCC-c-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 4677777777633 3 2566666666666666666 455566666666666666666663 32 4666666666666666
Q ss_pred cCCccC-CccccCCCCCCEEEcccccCCCC---CchhhhcccCCCee
Q 002155 220 LFDGII-PYELGDCISLTTLDLGNNNLSGL---IPEKIADLAQLQCL 262 (959)
Q Consensus 220 ~i~~~~-~~~~~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L 262 (959)
+|+... ...+..+++|++|++++|+++.. ....+..+++|+.|
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCCcCccHHHHHHHHCcCcceE
Confidence 666433 24456666666666666666422 23334445555544
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=1.5e-14 Score=151.82 Aligned_cols=199 Identities=17% Similarity=0.218 Sum_probs=102.4
Q ss_pred CcEEEcCCCcCCCCCCcccCCCCCCcEEEccCcccccc-CCcccccCCCCceeeecccccccccCcccCCC-cccEEecc
Q 002155 68 LKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGT-IEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLD 145 (959)
Q Consensus 68 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls 145 (959)
+..+.+++..+.. +........+|++||+++|.++.. +...+..+++|++|+|.+|.+.+..+..+... +|++|+++
T Consensus 25 ~~~lrl~~~~~~~-~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls 103 (284)
T d2astb2 25 VIAFRCPRSFMDQ-PLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLS 103 (284)
T ss_dssp CSEEECTTCEECS-CCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECT
T ss_pred ceEeecccccccc-chhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCcccc
Confidence 3455555554442 222233344566666666655532 23345556666666666665554444444333 35666666
Q ss_pred CC-cccccc-CcccccccceeEEEcccc-cccc-ccCccccC-CcCCceEeccCC--ccccc-CCccccCCCCCCEEEcc
Q 002155 146 SN-NFTGII-PVSIWNSETLMEFSAANN-LLEG-SLPYEVGN-AAALERLVLTNN--MLKGH-LPKEIGNLSALSVLDLN 217 (959)
Q Consensus 146 ~n-~l~~~~-p~~~~~~~~L~~L~l~~n-~l~~-~~~~~~~~-l~~L~~L~L~~n--~i~~~-~~~~~~~l~~L~~L~L~ 217 (959)
+| .+++.. ...+..+++|++|++++| .+++ .+...+.. .++|+.|+++++ .+++. +...+.++++|++|+++
T Consensus 104 ~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~ 183 (284)
T d2astb2 104 GCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLS 183 (284)
T ss_dssp TCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECT
T ss_pred ccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccc
Confidence 53 333221 112234566666666664 3321 11222222 356677776654 23321 12223456667777776
Q ss_pred CC-cCCccCCccccCCCCCCEEEcccc-cCCCCCchhhhcccCCCeeEcccc
Q 002155 218 SN-LFDGIIPYELGDCISLTTLDLGNN-NLSGLIPEKIADLAQLQCLVLSHN 267 (959)
Q Consensus 218 ~N-~i~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N 267 (959)
+| .++......+..+++|++|+|++| .+++.....++.+++|+.|+++++
T Consensus 184 ~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 184 DSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp TCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred cccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 64 355555556666677777777764 455554555666677777776665
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=3.4e-14 Score=134.68 Aligned_cols=87 Identities=21% Similarity=0.180 Sum_probs=50.0
Q ss_pred ccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCC
Q 002155 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQ 260 (959)
Q Consensus 181 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 260 (959)
|.+..++++|+|++|+|+ .++..+..+++|+.|+|++|.|+.+ +.|..+++|++|++++|+++.+.+..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred ccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCccccccccccc
Confidence 445555666666666665 3344455566666666666666533 2355566666666666666655455555566666
Q ss_pred eeEcccccCC
Q 002155 261 CLVLSHNNLS 270 (959)
Q Consensus 261 ~L~Ls~N~l~ 270 (959)
.|++++|+|+
T Consensus 91 ~L~L~~N~i~ 100 (162)
T d1a9na_ 91 ELILTNNSLV 100 (162)
T ss_dssp EEECCSCCCC
T ss_pred cceecccccc
Confidence 6666666553
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.42 E-value=2.5e-13 Score=122.11 Aligned_cols=102 Identities=25% Similarity=0.292 Sum_probs=82.4
Q ss_pred eEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccc
Q 002155 164 MEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNN 243 (959)
Q Consensus 164 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 243 (959)
+.|++++|.++ .++ .++.+++|++|++++|+|+ .+|..|+.+++|++|++++|.|+. +| .+..+++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 46888889887 444 4888888999999999888 567788888889999999998884 33 4888888899999888
Q ss_pred cCCCCC-chhhhcccCCCeeEcccccCC
Q 002155 244 NLSGLI-PEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 244 ~l~~~~-~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
+|+... ...+..+++|+.|++++|+++
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 888653 356788888888888888875
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.42 E-value=1.2e-14 Score=157.79 Aligned_cols=250 Identities=18% Similarity=0.251 Sum_probs=137.8
Q ss_pred cccCCcCCceEeccCCccccc----CCccccCCCCCCEEEccCCcCCcc----------CCccccCCCCCCEEEcccccC
Q 002155 180 EVGNAAALERLVLTNNMLKGH----LPKEIGNLSALSVLDLNSNLFDGI----------IPYELGDCISLTTLDLGNNNL 245 (959)
Q Consensus 180 ~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~N~i~~~----------~~~~~~~l~~L~~L~L~~N~l 245 (959)
.+.+...|++|+|++|.|... +...+...++|+.|+++++.+... +...+..+++|+.|+|++|.+
T Consensus 26 ~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i 105 (344)
T d2ca6a1 26 VLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAF 105 (344)
T ss_dssp HHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCC
T ss_pred HHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccccc
Confidence 344455555666666555431 223344556666666665543311 122344456677777777776
Q ss_pred CCCC----chhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccE
Q 002155 246 SGLI----PEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVD 321 (959)
Q Consensus 246 ~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~ 321 (959)
+... ...+...++|++|++++|.+..... . . +. ..+..+.. .........|+.
T Consensus 106 ~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~---~-~--------l~--~~l~~~~~---------~~~~~~~~~L~~ 162 (344)
T d2ca6a1 106 GPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAG---A-K--------IA--RALQELAV---------NKKAKNAPPLRS 162 (344)
T ss_dssp CTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHH---H-H--------HH--HHHHHHHH---------HHHHHTCCCCCE
T ss_pred ccccccchhhhhcccccchheeccccccccccc---c-c--------cc--cccccccc---------ccccccCcccce
Confidence 6432 2334456677777777776531000 0 0 00 00000000 000112234455
Q ss_pred EEccCCcCccc----CCccccCCCCCCEEEccCCCCCCC-----CCCCcCCCCcceEEEeeCcccCCc----cccccccC
Q 002155 322 LLLNNNMLSGK----IPGSLSRLTNLTTLDLSRNQLTGP-----IPSEFGDSIKLQGLYLGNNQLTGS----IPWSLGSL 388 (959)
Q Consensus 322 L~L~~n~i~~~----~~~~~~~l~~L~~L~Ls~n~l~~~-----~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l 388 (959)
+.+++|.++.. +..++...+.|++|++++|+++.. ....+...++|+.|++++|.++.. +...+..+
T Consensus 163 l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~ 242 (344)
T d2ca6a1 163 IICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSW 242 (344)
T ss_dssp EECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGC
T ss_pred eecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhccccccccccccccccccccccccc
Confidence 55555555422 223455667788888888877631 234556677788888888877532 33456678
Q ss_pred CCCcEEEccCCcCCCCCCCc----cCC--cccccccccCCccccCC----Cchhhh-cccccceEeeccccccCC
Q 002155 389 GGLVKLNLTGNKLSGKVPTS----FGN--LKELTHLDLSFNELDGQ----LPSSLS-NILNLVGLYLQHNKLSGP 452 (959)
Q Consensus 389 ~~L~~L~L~~N~i~~~~~~~----~~~--l~~L~~L~L~~N~l~~~----~~~~l~-~l~~L~~L~L~~N~l~~~ 452 (959)
++|++|+|++|.|++..... +.. .+.|++|++++|+|+.. +...+. ++++|+.|++++|++...
T Consensus 243 ~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~ 317 (344)
T d2ca6a1 243 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 317 (344)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred ccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCCc
Confidence 88888888888887432222 222 35688888888888642 233342 567888888888888653
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=3.5e-13 Score=126.64 Aligned_cols=107 Identities=21% Similarity=0.180 Sum_probs=91.9
Q ss_pred eeccCCcccCCCCCccccCccccceeeeccc-cccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccC
Q 002155 467 TMNMSNNLFDGGLPRSLGNLSYLTNLDLHEN-KFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAEN 545 (959)
Q Consensus 467 ~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 545 (959)
.++++++.+. ..|..+..+++|++|++++| .++...+.+|.++++|+.|+|++|+|+++.|.+|..+++|++|+|++|
T Consensus 12 ~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N 90 (156)
T d2ifga3 12 GLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (156)
T ss_dssp CEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred eEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCC
Confidence 3455555555 45677888999999999876 588666788999999999999999999888999999999999999999
Q ss_pred cCcccCCCCcccCCCccccccCCCCCCCC
Q 002155 546 RLEGMVPRSGICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 546 ~l~~~~~~~~~~~~l~~l~l~~N~~~c~~ 574 (959)
+|+.+++.......++.+++.+|||.|+|
T Consensus 91 ~l~~l~~~~~~~~~l~~L~L~~Np~~C~C 119 (156)
T d2ifga3 91 ALESLSWKTVQGLSLQELVLSGNPLHCSC 119 (156)
T ss_dssp CCSCCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred CCcccChhhhccccccccccCCCcccCCc
Confidence 99999988776678999999999999954
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.30 E-value=6e-14 Score=137.92 Aligned_cols=42 Identities=21% Similarity=0.240 Sum_probs=21.3
Q ss_pred ccCCcCCceEeccCCcccccCC-ccccCCCCCCEEEccCCcCC
Q 002155 181 VGNAAALERLVLTNNMLKGHLP-KEIGNLSALSVLDLNSNLFD 222 (959)
Q Consensus 181 ~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~N~i~ 222 (959)
+..+++|+.|+|++|+|+.... ..+..+++|+.|+|++|.+.
T Consensus 111 ~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~ 153 (198)
T d1m9la_ 111 IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp HHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHH
T ss_pred ccccccccccccccchhccccccccccCCCccceeecCCCccc
Confidence 4445555555555555553211 24555555555555555554
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.28 E-value=3.6e-12 Score=119.59 Aligned_cols=108 Identities=17% Similarity=0.109 Sum_probs=89.2
Q ss_pred ccccEEecCCCcccccCCcCccCCCCCcEEEcCCC-cCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceee
Q 002155 42 NQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNN-FLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120 (959)
Q Consensus 42 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n-~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 120 (959)
...+.++.+++++. ..|..+..+++|++|++++| .++...+.+|.++++|+.|+|++|+|+.+.+++|..+++|++|+
T Consensus 8 ~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 86 (156)
T d2ifga3 8 HGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLN 86 (156)
T ss_dssp SSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEE
T ss_pred CCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCccccccccccccccee
Confidence 34566888888877 67778888889999999765 48766667788899999999999999988888899999999999
Q ss_pred ecccccccccCcccCCCcccEEeccCCccc
Q 002155 121 IFRNHIYGSIPEYLSKLPLMVLDLDSNNFT 150 (959)
Q Consensus 121 L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~ 150 (959)
|++|++....+..+...+|++|+|++|.+.
T Consensus 87 Ls~N~l~~l~~~~~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 87 LSFNALESLSWKTVQGLSLQELVLSGNPLH 116 (156)
T ss_dssp CCSSCCSCCCSTTTCSCCCCEEECCSSCCC
T ss_pred ccCCCCcccChhhhccccccccccCCCccc
Confidence 999998877777887778888888888774
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.26 E-value=1.7e-13 Score=134.68 Aligned_cols=129 Identities=24% Similarity=0.248 Sum_probs=64.2
Q ss_pred ccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchh
Q 002155 382 PWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSA 461 (959)
Q Consensus 382 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 461 (959)
+..+..+++|++|+|++|+|+.+ + .+.++++|++|+|++|+|+ .+|..+..+++|+.|++++|+|+.++
T Consensus 41 ~~sl~~L~~L~~L~Ls~n~I~~i-~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~l~-------- 109 (198)
T d1m9la_ 41 DATLSTLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASLS-------- 109 (198)
T ss_dssp HHHHHHTTTCCEEECSEEEESCC-C-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCCHH--------
T ss_pred hhHHhcccccceeECcccCCCCc-c-cccCCccccChhhcccccc-cccccccccccccccccccccccccc--------
Confidence 34455555555555555555532 2 3555555555555555554 33444444445555555555554321
Q ss_pred hhhhceeccCCcccCCCCCccccCccccceeeeccccccccCC-cCCcCCCCCcEEeCCCCcCCCCCCcc----------
Q 002155 462 AWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIP-PDLGNLMQLEYLDVSRNRLCGQIPET---------- 530 (959)
Q Consensus 462 ~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~---------- 530 (959)
.+..+++|+.|+|++|+++.... ..+..+++|++|+|++|+++...+..
T Consensus 110 --------------------~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~v 169 (198)
T d1m9la_ 110 --------------------GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEV 169 (198)
T ss_dssp --------------------HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHH
T ss_pred --------------------cccccccccccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHH
Confidence 13334555555555555542111 23455555666666665554322211
Q ss_pred ccCCCCccEEe
Q 002155 531 MCSLSNLLYLS 541 (959)
Q Consensus 531 ~~~l~~L~~L~ 541 (959)
+..+|+|+.||
T Consensus 170 i~~lp~L~~LD 180 (198)
T d1m9la_ 170 VKRLPNLKKLD 180 (198)
T ss_dssp HHHCSSCCEES
T ss_pred HHHCCCcCEeC
Confidence 45566666665
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.44 E-value=8.6e-09 Score=96.75 Aligned_cols=88 Identities=23% Similarity=0.162 Sum_probs=55.3
Q ss_pred ccCccccCCcCCceEeccCCcccccC--CccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCc---
Q 002155 176 SLPYEVGNAAALERLVLTNNMLKGHL--PKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIP--- 250 (959)
Q Consensus 176 ~~~~~~~~l~~L~~L~L~~n~i~~~~--~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--- 250 (959)
.++..+..+++|++|+|++|+|+... +..+..+++|+.|+|++|.|+...+-.+....+|++|++++|.+.....
T Consensus 56 ~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~ 135 (162)
T d1koha1 56 TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQS 135 (162)
T ss_dssp HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHH
T ss_pred hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccch
Confidence 34444556777777777777777432 3445667777777777777775444344444567777777777764433
Q ss_pred ----hhhhcccCCCeeE
Q 002155 251 ----EKIADLAQLQCLV 263 (959)
Q Consensus 251 ----~~~~~l~~L~~L~ 263 (959)
..+..+++|+.||
T Consensus 136 ~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 136 TYISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHHHTTSTTCCEET
T ss_pred hHHHHHHHHCCCCCEEC
Confidence 2355667777664
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.44 E-value=1.1e-08 Score=96.03 Aligned_cols=107 Identities=22% Similarity=0.159 Sum_probs=59.6
Q ss_pred CCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCcccc
Q 002155 410 GNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYL 489 (959)
Q Consensus 410 ~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L 489 (959)
..+..+..++..++... .++..+..+++|+.|+|++|+|+.+.+ ++..+..+++|
T Consensus 39 ~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~------------------------~~~~~~~l~~L 93 (162)
T d1koha1 39 VAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDD------------------------MSSIVQKAPNL 93 (162)
T ss_dssp TTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSG------------------------GGTHHHHSTTC
T ss_pred hhccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCch------------------------hHHHHhhCCcc
Confidence 33344444544444443 334445566777777777777765432 12234456677
Q ss_pred ceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCcc-------ccCCCCccEEe
Q 002155 490 TNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPET-------MCSLSNLLYLS 541 (959)
Q Consensus 490 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-------~~~l~~L~~L~ 541 (959)
+.|+|++|+++...+-.+....+|+.|++++|++++..... +..+|+|+.||
T Consensus 94 ~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 94 KILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp CCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred cccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHHHHHCCCCCEEC
Confidence 77777777776332223334456777777777776544322 45567777664
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.37 E-value=5.2e-07 Score=92.12 Aligned_cols=149 Identities=13% Similarity=0.042 Sum_probs=99.0
Q ss_pred HHHHHhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CCceeccccceecCCceE
Q 002155 673 HILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 673 ~~~~~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 751 (959)
++......|+..+..+.++.+.||+... +++.+++|+...........+.+|...++.+. +-.+.+++++...++..+
T Consensus 8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~ 86 (263)
T d1j7la_ 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceE
Confidence 4445556676666555555578999875 56778888876554444445677888877664 333566777777788899
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC--------------------------------
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF-------------------------------- 799 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-------------------------------- 799 (959)
+||++++|.++.+...... ....++.++++.+..||+..
T Consensus 87 lv~~~l~G~~~~~~~~~~~---------~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (263)
T d1j7la_ 87 LLMSEADGVLCSEEYEDEQ---------SPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCEN 157 (263)
T ss_dssp EEEECCSSEEHHHHTTTCS---------CHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGG
T ss_pred EEEEecccccccccccccc---------cHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhc
Confidence 9999999988755432111 11223444455555555211
Q ss_pred ------------------------CCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 800 ------------------------TPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 800 ------------------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
...++|+|+.|.||++++++.+-++||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T d1j7la_ 158 WEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp GSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence 12378999999999999876667999998853
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.82 E-value=1.9e-05 Score=79.59 Aligned_cols=74 Identities=14% Similarity=0.080 Sum_probs=52.7
Q ss_pred eeccCCC-eEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCC--ceeccccceecCCceEEEEEeccCCCH
Q 002155 686 IIGDGGF-GTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQ--NLVPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 686 ~lg~G~~-g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
.+..|.. +.||+....++..+++|....... ..+..|...++.+... .+.+++++...++..++||||++|.++
T Consensus 17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~---~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~ 93 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGAL---NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 93 (255)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCTT---SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred EcCCcccCCeEEEEEeCCCCEEEEEeCCccCH---hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence 3445554 679999988888899997654332 2456777777766432 356677777777888999999988765
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.65 E-value=1.3e-05 Score=74.75 Aligned_cols=90 Identities=20% Similarity=0.186 Sum_probs=56.7
Q ss_pred ccccCCcCCceEeccCCcccc----cCCccccCCCCCCEEEccCCcCCccC----CccccCCCCCCEEEcccccCCCC--
Q 002155 179 YEVGNAAALERLVLTNNMLKG----HLPKEIGNLSALSVLDLNSNLFDGII----PYELGDCISLTTLDLGNNNLSGL-- 248 (959)
Q Consensus 179 ~~~~~l~~L~~L~L~~n~i~~----~~~~~~~~l~~L~~L~L~~N~i~~~~----~~~~~~l~~L~~L~L~~N~l~~~-- 248 (959)
..+...+.|++|+|++|.+.. .+.+.+...+.|+.|+|++|.|+... ..++...++|++|+|++|.+..+
T Consensus 38 ~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~ 117 (167)
T d1pgva_ 38 EAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGN 117 (167)
T ss_dssp HHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCH
T ss_pred HHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccH
Confidence 345566677777777777763 22234455677888888888776432 33455567788888887765533
Q ss_pred -----CchhhhcccCCCeeEccccc
Q 002155 249 -----IPEKIADLAQLQCLVLSHNN 268 (959)
Q Consensus 249 -----~~~~~~~l~~L~~L~Ls~N~ 268 (959)
+...+...++|+.|+++.+.
T Consensus 118 ~~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 118 QVEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHHHHHhCCCccEeeCcCCC
Confidence 23445556777777776553
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.40 E-value=1.6e-05 Score=74.19 Aligned_cols=64 Identities=17% Similarity=0.203 Sum_probs=28.3
Q ss_pred CCCCCCEEEccCC-CCCCC----CCCCcCCCCcceEEEeeCcccCCccc----cccccCCCCcEEEccCCcCC
Q 002155 339 RLTNLTTLDLSRN-QLTGP----IPSEFGDSIKLQGLYLGNNQLTGSIP----WSLGSLGGLVKLNLTGNKLS 402 (959)
Q Consensus 339 ~l~~L~~L~Ls~n-~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~----~~~~~l~~L~~L~L~~N~i~ 402 (959)
+.++|++|+|+++ .++.. +...+....+|+.|+|++|.+..... ..+...+.|++|+|++|.|+
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~ 85 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 85 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcc
Confidence 3466666776653 34321 11123344455555555555542111 22233344444444444444
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.33 E-value=0.00036 Score=74.62 Aligned_cols=75 Identities=16% Similarity=0.108 Sum_probs=47.3
Q ss_pred CeeccCCCeEEEEEEcCC-CCEEEEEEcccc-------chhhHHHHHHHHHHHhcCC-C-C-ceeccccceecCCceEEE
Q 002155 685 NIIGDGGFGTVYKAALPD-GKTVAVKKLSQA-------KTQGHREFTAEMETLGKVK-H-Q-NLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~-------~~~~~~~~~~e~~~l~~l~-h-~-niv~~~~~~~~~~~~~lv 753 (959)
+.||.|....||++...+ ++.|+||.-... ......+...|.+.++.+. + | .+.+++.+ +++..++|
T Consensus 32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~lv 109 (392)
T d2pula1 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 109 (392)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEEE
Confidence 468999999999998764 678999964321 1112234456777777663 2 3 34445433 45667899
Q ss_pred EEeccCCC
Q 002155 754 YEYMVNGS 761 (959)
Q Consensus 754 ~e~~~~g~ 761 (959)
|||+++..
T Consensus 110 mE~L~~~~ 117 (392)
T d2pula1 110 MEDLSHLK 117 (392)
T ss_dssp ECCCTTSE
T ss_pred EeccCCcc
Confidence 99997654
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.03 E-value=5.1e-05 Score=70.60 Aligned_cols=110 Identities=15% Similarity=0.166 Sum_probs=67.0
Q ss_pred cccceeEEEccc-ccccc----ccCccccCCcCCceEeccCCccccc----CCccccCCCCCCEEEccCCcCCcc----C
Q 002155 159 NSETLMEFSAAN-NLLEG----SLPYEVGNAAALERLVLTNNMLKGH----LPKEIGNLSALSVLDLNSNLFDGI----I 225 (959)
Q Consensus 159 ~~~~L~~L~l~~-n~l~~----~~~~~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~N~i~~~----~ 225 (959)
+.++|++|++++ +.++. .+-..+...++|++|+|++|.++.. +...+...+.++.+++++|.++.. +
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l 94 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 94 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHH
Confidence 345555555554 33432 2234455677788888888877642 233455677888888888877633 2
Q ss_pred CccccCCCCCCEEEc--ccccCCC----CCchhhhcccCCCeeEccccc
Q 002155 226 PYELGDCISLTTLDL--GNNNLSG----LIPEKIADLAQLQCLVLSHNN 268 (959)
Q Consensus 226 ~~~~~~l~~L~~L~L--~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~ 268 (959)
...+...++|+.++| ++|++.. .+.+.+...++|+.|+++.+.
T Consensus 95 ~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 95 VEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCC
Confidence 345566677876555 4566653 234455677788888877664
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=96.86 E-value=0.0015 Score=67.65 Aligned_cols=137 Identities=15% Similarity=0.120 Sum_probs=77.6
Q ss_pred CeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCce--ecccc-----ceecCCceEEEEEeccCCCHH-
Q 002155 692 FGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNL--VPLLG-----YCSFDEEKLLVYEYMVNGSLD- 763 (959)
Q Consensus 692 ~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni--v~~~~-----~~~~~~~~~lv~e~~~~g~L~- 763 (959)
--.||+++.++|+.|++|+.+... ...+++..|...+..+...++ +..+. .+..++..+.|++|++|..+.
T Consensus 35 EN~vy~v~~~dg~~~VlK~~rp~~-~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~ 113 (325)
T d1zyla1 35 ENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEA 113 (325)
T ss_dssp SSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCS
T ss_pred cceeEEEEcCCCCEEEEEEeCCCC-CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCC
Confidence 358999999999999999976432 234567788888877753222 22111 223456678899999765331
Q ss_pred ----HHH---------hhh----c-CCccccCHH-------------------HHHHHHHHHHHHHHHHH----hcCCCC
Q 002155 764 ----LWL---------RNR----T-GSLEVLGWD-------------------KRYKIACGAARGLAFLH----HGFTPH 802 (959)
Q Consensus 764 ----~~l---------~~~----~-~~~~~l~~~-------------------~~~~i~~~i~~~l~~LH----~~~~~~ 802 (959)
.+. +.. . ......+.. .+..+...+...++.+. .....+
T Consensus 114 ~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~ 193 (325)
T d1zyla1 114 DNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVL 193 (325)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCE
T ss_pred CCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCce
Confidence 111 110 0 000111111 11112222222333332 122467
Q ss_pred eEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 803 IIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 803 ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
++|+|+.+.||+++++ ..++||+-+..
T Consensus 194 liHgDlh~~NvL~~~~--~~~IDFdd~~~ 220 (325)
T d1zyla1 194 RLHGDCHAGNILWRDG--PMFVDLDDARN 220 (325)
T ss_dssp ECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred eecCCCCcccEEEeCC--ceEEechhccc
Confidence 8999999999999754 45899998863
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.43 E-value=0.011 Score=60.48 Aligned_cols=160 Identities=8% Similarity=0.011 Sum_probs=85.0
Q ss_pred cCHHHHHHHhcCCCCCCee-----ccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCc--eeccc
Q 002155 669 LTLVHILEATNNFCKTNII-----GDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN--LVPLL 741 (959)
Q Consensus 669 ~~~~~~~~~~~~f~~~~~l-----g~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~ 741 (959)
++..++.....+|.+++.. ..|---+.|+.+..+| .+++|+...... .+++..|++++..+...+ +...+
T Consensus 3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g-~yVLri~~~~~~--~~~l~~~~~~l~~L~~~g~pvp~pi 79 (316)
T d2ppqa1 3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE--KNDLPFFLGLMQHLAAKGLSCPLPL 79 (316)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCC-cEEEEEcCCCCC--HHHHHHHHHHHHhhhhccccccccc
Confidence 4567777777888886554 3565678899987655 589998864322 234455666666664222 11111
Q ss_pred c------ceecCCceEEEEEeccCCCHHH--------------HHhhhc---C-C-ccc------------------cCH
Q 002155 742 G------YCSFDEEKLLVYEYMVNGSLDL--------------WLRNRT---G-S-LEV------------------LGW 778 (959)
Q Consensus 742 ~------~~~~~~~~~lv~e~~~~g~L~~--------------~l~~~~---~-~-~~~------------------l~~ 778 (959)
. +...++..+.++.+..+..... .++... . . ... ...
T Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (316)
T d2ppqa1 80 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 159 (316)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred eecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcc
Confidence 1 1122345567777776643311 001000 0 0 000 000
Q ss_pred HHHHHHHHHHHHHHHHHH-hcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 779 DKRYKIACGAARGLAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 779 ~~~~~i~~~i~~~l~~LH-~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
......+..+...+...+ .....|+||+|+.++||+++.+...-+.||+.+..
T Consensus 160 ~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~ 213 (316)
T d2ppqa1 160 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 213 (316)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEeccccccc
Confidence 111112222222222222 12256899999999999999887778999998853
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.26 E-value=0.00048 Score=63.68 Aligned_cols=86 Identities=16% Similarity=0.183 Sum_probs=54.7
Q ss_pred ccceeEEEcccccccc----ccCccccCCcCCceEeccCCcccc----cCCccccCCCCCCEEEc--cCCcCCc----cC
Q 002155 160 SETLMEFSAANNLLEG----SLPYEVGNAAALERLVLTNNMLKG----HLPKEIGNLSALSVLDL--NSNLFDG----II 225 (959)
Q Consensus 160 ~~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~L~~n~i~~----~~~~~~~~l~~L~~L~L--~~N~i~~----~~ 225 (959)
.+.|++|++++|.++. .+-..+...++++.|++++|.+.. .+.+.+...++|+.++| ++|.+.. .+
T Consensus 45 n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~L 124 (166)
T d1io0a_ 45 NTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEI 124 (166)
T ss_dssp CCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHH
T ss_pred CCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHH
Confidence 3445555555554432 222345567788888888888764 23356677788887665 4666753 24
Q ss_pred CccccCCCCCCEEEcccccC
Q 002155 226 PYELGDCISLTTLDLGNNNL 245 (959)
Q Consensus 226 ~~~~~~l~~L~~L~L~~N~l 245 (959)
...+...++|++|+++.+..
T Consensus 125 a~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 125 ANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp HHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHhCCCcCEEeCcCCCC
Confidence 45566788999999987754
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.07 E-value=0.0058 Score=65.03 Aligned_cols=72 Identities=18% Similarity=0.213 Sum_probs=48.0
Q ss_pred CeeccCCCeEEEEEEcCC--------CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCce-eccccceecCCceEEEEE
Q 002155 685 NIIGDGGFGTVYKAALPD--------GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNL-VPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e 755 (959)
+.|+.|-.-.+|++..++ .+.|++++.... .......+|..+++.+.-.++ .++++++. -.+|||
T Consensus 48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~--~~~idr~~E~~i~~~ls~~gl~Pkll~~~~----~g~I~e 121 (395)
T d1nw1a_ 48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS----GGRLEE 121 (395)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET----TEEEEC
T ss_pred EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc--chhhHHHHHHHHHHHHHhCCCCCeEEEEcC----CceEEE
Confidence 468888899999998653 345677765432 223345678888888753344 46666653 278999
Q ss_pred eccCCCH
Q 002155 756 YMVNGSL 762 (959)
Q Consensus 756 ~~~~g~L 762 (959)
|++|..+
T Consensus 122 fi~g~~l 128 (395)
T d1nw1a_ 122 YIPSRPL 128 (395)
T ss_dssp CCCEEEC
T ss_pred EeccccC
Confidence 9987544
|